| Standard name | Systematic name | Name description | Description |
|---|---|---|---|
| DXO1 | YDR370C | Cytoplasmic 5' exoribonuclease | Cytoplasmic 5' exoribonuclease; transcriptomics wide distributive exonuclease; involved in cytoplasmic mRNA degradation, turnover of tRNA introns and processing of spliceosomal introns; required for the final 5'-end processing of 25S rRNA; minor contributor to No-Go Decay and the unfolded protein response; decapping protein involved in surveillance and removal of non-canonical nicotinamide adenine dinucleotide (NAD) capped nuclear mRNAs (NAD-RNAs); sequence similarity to Rai1p |
Cell cycle phase and timing of transcription peak
| Cell cycle phase | Time (min) |
|---|---|
CYCLoPs localization & abundance
| WT1 | WT2 | WT3 | |
|---|---|---|---|
| Cytoplasm | 1.000 | 0.962 | 0.966 |
| Mito | 0.059 | NaN | 0.091 |
GFP localization & abundance
| GFP localization | GFP abundance |
|---|---|
| no data | no data |
GO term count
| Metabolism | Cell cycle | Cell division | Signal transduction | DNA replication | |
|---|---|---|---|---|---|
| DXO1 | 2 | 0 | 0 | 0 | 0 |
List of interactors
Use the search utility to find the interactor you are looking for. By clicking the column headers the table will be sorted on that column. Use shift+click to sort on multiple columns. Default sorting is on number of experiments, number of unique methods and the number of publications, and alphabetical on standard name, in that order.| Standard name | Systematic name | Name description | Type | #Experiments | #Methods | #Publications | Evidence |
|---|---|---|---|---|---|---|---|
| FKH1 | YIL131C | Forkhead family transcription factor | regulation | 2 | 1 | 2 | chromatin immunoprecipitation-chip evidence, chromatin immunoprecipitation-chip evidence |
| DHH1 | YDL160C | Cytoplasmic DEAD-box helicase and mRNA decapping activator | physical | 2 | 1 | 2 | Affinity Capture-RNA, Affinity Capture-RNA |
| SFP1 | YLR403W | Regulates transcription of ribosomal protein and biogenesis genes | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence |
| RFX1 | YLR176C | Major transcriptional repressor of DNA-damage-regulated genes | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence |
| SPT10 | YJL127C | Histone H3 acetylase with a role in transcriptional regulation | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence |
| MED2 | YDL005C | Subunit of the RNA polymerase II mediator complex | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence |
| TFC7 | YOR110W | RNA pol III transcription initiation factor complex (TFIIIC) subunit | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence |
| REB1 | YBR049C | RNA polymerase I enhancer binding protein | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence |
| FHL1 | YPR104C | Regulator of ribosomal protein (RP) transcription | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence |
| CCR4 | YAL021C | Component of the CCR4-NOT transcriptional complex | physical | 1 | 1 | 1 | Affinity Capture-RNA |
| ARP3 | YJR065C | Essential component of the Arp2/3 complex | genetic | 1 | 1 | 1 | Negative Genetic |
| CSE4 | YKL049C | Centromeric histone H3-like protein | genetic | 1 | 1 | 1 | Positive Genetic |
| SSB2 | YNL209W | Cytoplasmic ATPase that is a ribosome-associated molecular chaperone | physical | 1 | 1 | 1 | Co-purification |
| ISW1 | YBR245C | ATPase subunit of imitation-switch (ISWI) class chromatin remodelers | physical | 1 | 1 | 1 | Affinity Capture-RNA |
| MPT5 | YGL178W | mRNA-binding protein of the PUF family | physical | 1 | 1 | 1 | Affinity Capture-RNA |
| SWI3 | YJL176C | Subunit of the SWI/SNF chromatin remodeling complex | genetic | 1 | 1 | 1 | Negative Genetic |
| SSC1 | YJR045C | Hsp70 family ATPase | genetic | 1 | 1 | 1 | Negative Genetic |
| TCA17 | YEL048C | Component of transport protein particle (TRAPP) complex II | genetic | 1 | 1 | 1 | Negative Genetic |
| RRT5 | YFR032C | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic |
| PMA1 | YGL008C | Plasma membrane P2-type H+-ATPase | genetic | 1 | 1 | 1 | Negative Genetic |