| RFX1 | YLR176C | Major transcriptional repressor of DNA-damage-regulated genes | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | TFC7 | YOR110W | RNA pol III transcription initiation factor complex (TFIIIC) subunit | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | SPN1 | YPR133C | Protein involved in RNA polymerase II transcription | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | CBC2 | YPL178W | Small subunit of the heterodimeric cap binding complex with Sto1p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HCR1 | YLR192C | eIF3j component of translation initiation factor 3 (eIF3) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NAM7 | YMR080C | ATP-dependent RNA helicase of the SFI superfamily | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | MCD1 | YDL003W | Essential alpha-kleisin subunit of the cohesin complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ATG3 | YNR007C | E2-like enzyme | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | LPD1 | YFL018C | Dihydrolipoamide dehydrogenase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | IDH2 | YOR136W | Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NOP14 | YDL148C | Nucleolar protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | LSB3 | YFR024C-A | Protein containing a C-terminal SH3 domain | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PRP9 | YDL030W | Subunit of the SF3a splicing factor complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CCT6 | YDR188W | Subunit of the cytosolic chaperonin Cct ring complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VAM6 | YDL077C | Guanine nucleotide exchange factor for the GTPase Gtr1p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DIM1 | YPL266W | Essential 18S rRNA dimethylase (dimethyladenosine transferase) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RSP5 | YER125W | NEDD4 family E3 ubiquitin ligase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CDC4 | YFL009W | F-box protein required for both the G1/S and G2/M phase transitions | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | FAL1 | YDR021W | Nucleolar protein required for maturation of 18S rRNA | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PKC1 | YBL105C | Protein serine/threonine kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CDC34 | YDR054C | Ubiquitin-conjugating enzyme (E2) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VAM7 | YGL212W | Vacuolar SNARE protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SFL1 | YOR140W | Transcriptional repressor and activator | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPL22A | YLR061W | Ribosomal 60S subunit protein L22A | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SHO1 | YER118C | Transmembrane osmosensor for filamentous growth and HOG pathways | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | GID11 | YLR149C | Substrate receptor of the glucose-induced degradation-deficient (GID) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SLF1 | YDR515W | RNA binding protein that associates with polysomes | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | ABZ2 | YMR289W | Aminodeoxychorismate lyase (4-amino-4-deoxychorismate lyase) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | POT1 | YIL160C | 3-ketoacyl-CoA thiolase with broad chain length specificity | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | KTR1 | YOR099W | Alpha-1,2-mannosyltransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SCS7 | YMR272C | Sphingolipid alpha-hydroxylase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | FAD1 | YDL045C | Flavin adenine dinucleotide (FAD) synthetase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | WWM1 | YFL010C | WW domain containing protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MRM2 | YGL136C | Mitochondrial 2' O-ribose methyltransferase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | BIO4 | YNR057C | Dethiobiotin synthetase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SEI1 | YLR404W | Seipin involved in lipid droplet (LD) assembly | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | EMP65 | YER140W | Integral membrane protein of the ER | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YHC1 | YLR298C | Component of the U1 snRNP complex required for pre-mRNA splicing | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GRX8 | YLR364W | Glutaredoxin that employs a dithiol mechanism of catalysis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ZNF1 | YFL052W | Zinc cluster transcription factor that regulates respiratory growth | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YPR089W | YPR089W | Protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic |