GEnome-wide tool for Multi-scale Modeling
data Extraction and Representation
for Saccharomyces cerevisiae

List of interactors

Use the search utility to find the interactor you are looking for. By clicking the column headers the table will be sorted on that column. Use shift+click to sort on multiple columns. Default sorting is on number of experiments, number of unique methods and the number of publications, and alphabetical on standard name, in that order.

Standard name	Systematic name	Name description	Type	#Experiments	#Methods	#Publications	Evidence
PRP43	YGL120C	RNA helicase in the DEAH-box family	physical	8	4	4	Two-hybrid, Affinity Capture-MS, Affinity Capture-Western, Two-hybrid, Reconstituted Complex, Two-hybrid, Two-hybrid, Affinity Capture-Western
FKH1	YIL131C	Forkhead family transcription factor	regulation	3	3	3	chromatin immunoprecipitation-chip evidence, chromatin immunoprecipitation- exonuclease evidence, ChEC-Seq experiments
FKH2	YNL068C	Forkhead family transcription factor	regulation	2	2	2	chromatin immunoprecipitation-chip evidence, ChEC-Seq experiments
CKB1	YGL019W	Beta regulatory subunit of casein kinase 2 (CK2)	genetic	2	2	2	Phenotypic Enhancement, Negative Genetic
PXR1	YGR280C	Essential protein involved in rRNA and snoRNA maturation	physical	2	2	2	PCA, Two-hybrid
UME6	YDR207C	Rpd3L histone deacetylase complex subunit	regulation	2	1	2	chromatin immunoprecipitation-chip evidence, chromatin immunoprecipitation-chip evidence
CKA1	YIL035C	Alpha catalytic subunit of casein kinase 2 (CK2)	physical	2	2	1	Two-hybrid, Affinity Capture-Western
SFP1	YLR403W	Regulates transcription of ribosomal protein and biogenesis genes	regulation	1	1	1	DNA to cDNA expression microarray evidence
GCN5	YGR252W	Catalytic subunit of ADA and SAGA histone acetyltransferase complexes	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MET32	YDR253C	Zinc-finger DNA-binding transcription factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MET4	YNL103W	Leucine-zipper transcriptional activator	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TYE7	YOR344C	Serine-rich protein that contains a bHLH DNA binding motif	regulation	1	1	1	DNA to cDNA expression microarray evidence
RAP1	YNL216W	Essential DNA-binding transcription regulator that binds many loci	regulation	1	1	1	DNA to cDNA expression microarray evidence
SUA7	YPR086W	Transcription factor TFIIB	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RPD3	YNL330C	Histone deacetylase, component of both the Rpd3S and Rpd3L complexes	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SPN1	YPR133C	Protein involved in RNA polymerase II transcription	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CKA2	YOR061W	Alpha' catalytic subunit of casein kinase 2 (CK2)	physical	1	1	1	Affinity Capture-MS
PWP2	YCR057C	Conserved 90S pre-ribosomal component	physical	1	1	1	Affinity Capture-Western
NOP58	YOR310C	Protein involved in producing mature rRNAs and snoRNAs	physical	1	1	1	Affinity Capture-MS
NSR1	YGR159C	Nucleolin, nucleolar protein that binds nuclear localization sequences	physical	1	1	1	Two-hybrid
GAR1	YHR089C	Protein component of the H/ACA snoRNP pseudouridylase complex	physical	1	1	1	PCA
NHP2	YDL208W	Protein related to mammalian high mobility group (HMG) proteins	physical	1	1	1	PCA
NOP1	YDL014W	Histone glutamine methyltransferase, modifies H2A at Q105 in nucleolus	physical	1	1	1	Two-hybrid
CCR4	YAL021C	Component of the CCR4-NOT transcriptional complex	physical	1	1	1	Affinity Capture-RNA
ASC1	YMR116C	G-protein beta subunit and guanine dissociation inhibitor for Gpa2p	physical	1	1	1	Affinity Capture-MS
CDC12	YHR107C	Component of the septin ring that is required for cytokinesis	genetic	1	1	1	Synthetic Growth Defect
ENP1	YBR247C	Protein associated with U3 and U14 snoRNAs	physical	1	1	1	Two-hybrid
DHH1	YDL160C	Cytoplasmic DEAD-box helicase and mRNA decapping activator	physical	1	1	1	Affinity Capture-RNA
KRR1	YCL059C	Nucleolar protein required for rRNA synthesis and ribosomal assembly	physical	1	1	1	Affinity Capture-MS
NCL1	YBL024W	S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase	genetic	1	1	1	Negative Genetic
NOC4	YPR144C	Nucleolar protein	physical	1	1	1	Affinity Capture-MS
PUF3	YLL013C	Protein of the mitochondrial outer surface	physical	1	1	1	Affinity Capture-RNA
GDE1	YPL110C	Glycerophosphocholine (GroPCho) phosphodiesterase	physical	1	1	1	Affinity Capture-MS
YME2	YMR302C	Integral inner mitochondrial membrane protein	physical	1	1	1	Affinity Capture-MS
SPC25	YER018C	Component of the kinetochore-associated Ndc80 complex	physical	1	1	1	Two-hybrid
RPA34	YJL148W	RNA polymerase I subunit A34.5	physical	1	1	1	Two-hybrid
TMA23	YMR269W	Nucleolar protein implicated in ribosome biogenesis	physical	1	1	1	PCA
SRP40	YKR092C	Nucleolar serine-rich protein	physical	1	1	1	PCA
RIO2	YNL207W	Essential serine kinase involved in the processing of 20S pre-rRNA	physical	1	1	1	Affinity Capture-MS
SBP1	YHL034C	Protein that binds eIF4G and has a role in repression of translation	physical	1	1	1	Affinity Capture-RNA
UTP15	YMR093W	Nucleolar protein	physical	1	1	1	Affinity Capture-Western
UTP6	YDR449C	Nucleolar protein	physical	1	1	1	Affinity Capture-Western
UTP13	YLR222C	Nucleolar protein	physical	1	1	1	Affinity Capture-Western
UTP18	YJL069C	Small-subunit processome protein involved in pre-18S rRNA maturation	physical	1	1	1	Affinity Capture-Western
UTP21	YLR409C	Subunit of U3-containing 90S preribosome and SSU processome complexes	physical	1	1	1	Affinity Capture-Western
UTP22	YGR090W	Component of the small-subunit processome	physical	1	1	1	Affinity Capture-Western
URB1	YKL014C	Protein required for the normal accumulation of 25S and 5.8S rRNAs	physical	1	1	1	Affinity Capture-Western
SSF1	YHR066W	Constituent of 66S pre-ribosomal particles	physical	1	1	1	Affinity Capture-Western
RPC82	YPR190C	RNA polymerase III subunit C82	physical	1	1	1	Affinity Capture-MS
UTP10	YJL109C	Nucleolar protein	physical	1	1	1	Affinity Capture-MS
SQS1	YNL224C	Protein that stimulates the ATPase and helicase activities of Prp43p	physical	1	1	1	Two-hybrid
SGD1	YLR336C	Essential nuclear protein	physical	1	1	1	Two-hybrid
UTP7	YER082C	Nucleolar protein	physical	1	1	1	Two-hybrid
SNU13	YEL026W	RNA binding protein	physical	1	1	1	Two-hybrid
RPS0A	YGR214W	Ribosomal 40S subunit protein S0A	physical	1	1	1	Affinity Capture-MS
RPS1A	YLR441C	Ribosomal protein of the small (40S) subunit	physical	1	1	1	Affinity Capture-MS
RPS6A	YPL090C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS9A	YPL081W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS10A	YOR293W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS15	YOL040C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS3	YNL178W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
SOL1	YNR034W	Protein with a possible role in tRNA export	genetic	1	1	1	Negative Genetic
YSW1	YBR148W	Protein required for normal prospore membrane formation	genetic	1	1	1	Synthetic Rescue
FAL1	YDR021W	Nucleolar protein required for maturation of 18S rRNA	physical	1	1	1	Two-hybrid
ERG11	YHR007C	Lanosterol 14-alpha-demethylase	genetic	1	1	1	Synthetic Growth Defect
DHR2	YKL078W	Predominantly nucleolar DEAH-box ATP-dependent RNA helicase	physical	1	1	1	Two-hybrid
MPT5	YGL178W	mRNA-binding protein of the PUF family	physical	1	1	1	Affinity Capture-RNA
MOG1	YJR074W	Conserved nuclear protein that interacts with GTP-Gsp1p	genetic	1	1	1	Negative Genetic
GIS2	YNL255C	Translational activator for mRNAs with internal ribosome entry sites	physical	1	1	1	Affinity Capture-RNA
APJ1	YNL077W	Hsp40 chaperone with a role in SUMO-mediated protein degradation	physical	1	1	1	Affinity Capture-MS
EST2	YLR318W	Reverse transcriptase subunit of the telomerase holoenzyme	physical	1	1	1	Affinity Capture-Western
NOP10	YHR072W-A	Subunit of box H/ACA snoRNP complex	physical	1	1	1	PCA