GEnome-wide tool for Multi-scale Modeling
data Extraction and Representation
for Saccharomyces cerevisiae

List of interactors

Use the search utility to find the interactor you are looking for. By clicking the column headers the table will be sorted on that column. Use shift+click to sort on multiple columns. Default sorting is on number of experiments, number of unique methods and the number of publications, and alphabetical on standard name, in that order.

Standard name	Systematic name	Name description	Type	#Experiments	#Methods	#Publications	Evidence
UTP21	YLR409C	Subunit of U3-containing 90S preribosome and SSU processome complexes	physical	22	5	14	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, PCA, Two-hybrid, Two-hybrid, Affinity Capture-MS, Two-hybrid, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Reconstituted Complex, Reconstituted Complex, Two-hybrid, Two-hybrid, Affinity Capture-MS, Affinity Capture-MS
UTP18	YJL069C	Small-subunit processome protein involved in pre-18S rRNA maturation	physical	14	2	12	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Two-hybrid, Affinity Capture-MS, Affinity Capture-MS, Two-hybrid, Affinity Capture-MS
DIP2	YLR129W	Nucleolar protein	physical	12	4	10	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, PCA, Affinity Capture-MS, Reconstituted Complex, Reconstituted Complex, Two-hybrid, Affinity Capture-MS, Affinity Capture-MS
UTP6	YDR449C	Nucleolar protein	physical	12	2	8	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western
UTP13	YLR222C	Nucleolar protein	physical	11	2	11	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Reconstituted Complex, Affinity Capture-MS
UTP22	YGR090W	Component of the small-subunit processome	physical	9	2	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western
ENP1	YBR247C	Protein associated with U3 and U14 snoRNAs	physical	8	2	6	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS
NOC4	YPR144C	Nucleolar protein	physical	8	2	6	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS
UTP7	YER082C	Nucleolar protein	physical	8	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
RRP9	YPR137W	Protein involved in pre-rRNA processing	physical	7	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
UTP9	YHR196W	Nucleolar protein	physical	7	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
UTP10	YJL109C	Nucleolar protein	physical	7	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
NOP58	YOR310C	Protein involved in producing mature rRNAs and snoRNAs	physical	7	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
UTP4	YDR324C	Subunit of U3-containing 90S preribosome and SSU processome complexes	physical	6	1	6	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
NAN1	YPL126W	U3 snoRNP protein	physical	6	2	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS
UTP20	YBL004W	Component of the small-subunit (SSU) processome	physical	6	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
BMS1	YPL217C	GTPase required for ribosomal subunit synthesis and rRNA processing	physical	6	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
UTP8	YGR128C	Nucleolar protein required for export of tRNAs from the nucleus	physical	5	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
UTP15	YMR093W	Nucleolar protein	physical	5	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
NOP1	YDL014W	Histone glutamine methyltransferase, modifies H2A at Q105 in nucleolus	physical	5	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
ECM16	YMR128W	Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP	physical	5	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
KRE33	YNL132W	Acetyltransferase required for biogenesis of small ribosomal subunit	physical	5	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
MPP10	YJR002W	Component of the SSU processome and 90S preribosome	physical	5	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
IMP4	YNL075W	Component of the SSU processome	physical	5	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
KRR1	YCL059C	Nucleolar protein required for rRNA synthesis and ribosomal assembly	physical	5	2	4	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western
RRP12	YPL012W	Protein required for export of the ribosomal subunits	physical	4	2	4	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS
SOF1	YLL011W	Protein required for biogenesis of 40S (small) ribosomal subunit	physical	4	1	4	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
RRP5	YMR229C	RNA binding protein involved in synthesis of 18S and 5.8S rRNAs	physical	4	1	4	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
RPS5	YJR123W	Protein component of the small (40S) ribosomal subunit	physical	4	2	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western
HAS1	YMR290C	ATP-dependent RNA helicase	physical	3	2	3	Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS
RPS14A	YCR031C	Protein component of the small (40S) ribosomal subunit	physical	3	2	3	Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS
DIM1	YPL266W	Essential 18S rRNA dimethylase (dimethyladenosine transferase)	physical	3	2	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western
BFR2	YDR299W	Component of the SSU and 90S preribosomes	physical	3	1	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
ENP2	YGR145W	Component of the SSU	physical	3	1	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
PRP43	YGL120C	RNA helicase in the DEAH-box family	physical	3	1	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
UTP11	YKL099C	Subunit of U3-containing Small Subunit (SSU) processome complex	physical	3	1	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
UTP30	YKR060W	Subunit of U3-containing 90S preribosome complex	physical	3	1	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
RPS7A	YOR096W	Protein component of the small (40S) ribosomal subunit	physical	3	1	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
NOP56	YLR197W	Essential evolutionarily-conserved nucleolar protein	physical	3	1	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
EMG1	YLR186W	Methyltransferase for rRNA	physical	3	1	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
IMP3	YHR148W	Component of the SSU processome	physical	3	1	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
BUD21	YOR078W	Component of small ribosomal subunit (SSU) processosome	physical	3	1	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
NOP14	YDL148C	Nucleolar protein	physical	3	1	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
PNO1	YOR145C	Essential nucleolar protein required for pre-18S rRNA processing	physical	3	3	2	Affinity Capture-MS, Two-hybrid, Affinity Capture-Western
RRP7	YCL031C	Essential protein involved in rRNA processing and ribosome biogenesis	physical	3	2	2	Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS
UBP10	YNL186W	Ubiquitin-specific protease, deubiquitinates Ub-protein moieties	physical	3	2	1	Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS
RPS8A	YBL072C	Protein component of the small (40S) ribosomal subunit	physical	2	2	2	Affinity Capture-MS, Affinity Capture-Western
RPL1A	YPL220W	Ribosomal 60S subunit protein L1A	physical	2	2	2	Affinity Capture-MS, Affinity Capture-Western
CRM1	YGR218W	Nuclear export factor, exportin	physical	2	2	2	Affinity Capture-MS, Affinity Capture-Western
LCP5	YER127W	Essential protein involved in maturation of 18S rRNA	physical	2	2	2	Affinity Capture-MS, Two-hybrid
CBF5	YLR175W	Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
ESF1	YDR365C	Nucleolar protein involved in pre-rRNA processing	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
ROK1	YGL171W	RNA-dependent ATPase	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
RPP2B	YDR382W	Ribosomal protein P2 beta	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
RPS11A	YDR025W	Protein component of the small (40S) ribosomal subunit	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
RPS13	YDR064W	Protein component of the small (40S) ribosomal subunit	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
RPS16A	YMR143W	Protein component of the small (40S) ribosomal subunit	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
RPS1A	YLR441C	Ribosomal protein of the small (40S) subunit	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
RPS22B	YLR367W	Protein component of the small (40S) ribosomal subunit	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
RPS4A	YJR145C	Protein component of the small (40S) ribosomal subunit	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
RPS9A	YPL081W	Protein component of the small (40S) ribosomal subunit	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
RPS9B	YBR189W	Protein component of the small (40S) ribosomal subunit	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
RPS3	YNL178W	Protein component of the small (40S) ribosomal subunit	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
HCA4	YJL033W	DEAD box RNA helicase	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
CSL4	YNL232W	Exosome non-catalytic core component	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
ERO1	YML130C	Thiol oxidase required for oxidative protein folding in the ER	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
DBP8	YHR169W	ATPase, putative RNA helicase of the DEAD-box family	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
HTA2	YBL003C	Histone H2A	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
MVD1	YNR043W	Mevalonate pyrophosphate decarboxylase	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
PRE9	YGR135W	Alpha 3 subunit of the 20S proteasome	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
ESF2	YNR054C	Essential nucleolar protein involved in pre-18S rRNA processing	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
MRD1	YPR112C	Essential conserved small ribosomal subunit (40s) synthesis factor	genetic	2	2	1	Synthetic Growth Defect, Phenotypic Enhancement
FKH1	YIL131C	Forkhead family transcription factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SFP1	YLR403W	Regulates transcription of ribosomal protein and biogenesis genes	regulation	1	1	1	DNA to cDNA expression microarray evidence
XBP1	YIL101C	Transcriptional repressor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
STP1	YDR463W	Transcription factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YAP1	YML007W	Basic leucine zipper (bZIP) transcription factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MED4	YOR174W	Subunit of the RNA polymerase II mediator complex	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
LEU3	YLR451W	Zinc-knuckle transcription factor, repressor and activator	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
INO2	YDR123C	Transcription factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ESA1	YOR244W	Catalytic subunit of the histone acetyltransferase complex (NuA4)	genetic	1	1	1	Positive Genetic
BRX1	YOL077C	Nucleolar protein	physical	1	1	1	Affinity Capture-MS
BRX1	YOL077C	Nucleolar protein	genetic	1	1	1	Positive Genetic
HAS1	YMR290C	ATP-dependent RNA helicase	genetic	1	1	1	Negative Genetic
NOP2	YNL061W	rRNA m5C methyltransferase	genetic	1	1	1	Positive Genetic
NOP9	YJL010C	Essential subunit of U3-containing 90S preribosome	physical	1	1	1	Affinity Capture-MS
PRP43	YGL120C	RNA helicase in the DEAH-box family	genetic	1	1	1	Positive Genetic
NOC3	YLR002C	Subunit of a nuclear complex with Noc2p and pre-replicative complexes	genetic	1	1	1	Positive Genetic
UTP13	YLR222C	Nucleolar protein	genetic	1	1	1	Negative Genetic
RML2	YEL050C	Mitochondrial ribosomal protein of the large subunit (L2)	physical	1	1	1	Affinity Capture-MS
SCL1	YGL011C	Alpha 1 subunit of the 20S proteasome	physical	1	1	1	Affinity Capture-MS
YGR210C	YGR210C	Putative protein of unknown function	physical	1	1	1	Affinity Capture-MS
RCL1	YOL010W	Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis	physical	1	1	1	Affinity Capture-MS
RPS4B	YHR203C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RRP5	YMR229C	RNA binding protein involved in synthesis of 18S and 5.8S rRNAs	genetic	1	1	1	Negative Genetic
RPS17B	YDR447C	Ribosomal protein 51 (rp51) of the small (40s) subunit	physical	1	1	1	Affinity Capture-MS
RPS18A	YDR450W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS24B	YIL069C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPL26B	YGR034W	Ribosomal 60S subunit protein L26B	physical	1	1	1	Affinity Capture-MS
RPS17A	YML024W	Ribosomal protein 51 (rp51) of the small (40s) subunit	physical	1	1	1	Affinity Capture-MS
RPS1B	YML063W	Ribosomal protein of the small (40S) subunit	physical	1	1	1	Affinity Capture-MS
RPS22A	YJL190C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPL13B	YMR142C	Ribosomal 60S subunit protein L13B	physical	1	1	1	Affinity Capture-MS
RPL16B	YNL069C	Ribosomal 60S subunit protein L16B	physical	1	1	1	Affinity Capture-MS
RPL2A	YFR031C-A	Ribosomal 60S subunit protein L2A	physical	1	1	1	Affinity Capture-MS
RPL36A	YMR194W	Ribosomal 60S subunit protein L36A	physical	1	1	1	Affinity Capture-MS
RPL6B	YLR448W	Ribosomal 60S subunit protein L6B	physical	1	1	1	Affinity Capture-MS
RPL11B	YGR085C	Ribosomal 60S subunit protein L11B	physical	1	1	1	Affinity Capture-MS
RPL19A	YBR084C-A	Ribosomal 60S subunit protein L19A	physical	1	1	1	Affinity Capture-MS
RPL33A	YPL143W	Ribosomal 60S subunit protein L33A	physical	1	1	1	Affinity Capture-MS
RPL15A	YLR029C	Ribosomal 60S subunit protein L15A	physical	1	1	1	Affinity Capture-MS
RPL17A	YKL180W	Ribosomal 60S subunit protein L17A	physical	1	1	1	Affinity Capture-MS
RPS14B	YJL191W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPL27A	YHR010W	Ribosomal 60S subunit protein L27A	physical	1	1	1	Affinity Capture-MS
RPL5	YPL131W	Ribosomal 60S subunit protein L5	physical	1	1	1	Affinity Capture-Western
SPB4	YFL002C	Putative ATP-dependent RNA helicase	physical	1	1	1	Affinity Capture-Western
RPL3	YOR063W	Ribosomal 60S subunit protein L3	physical	1	1	1	Affinity Capture-MS
RLP7	YNL002C	Nucleolar protein similar to large ribosomal subunit L7 proteins	physical	1	1	1	Affinity Capture-MS
RPL4A	YBR031W	Ribosomal 60S subunit protein L4A	physical	1	1	1	Affinity Capture-MS
RPL4B	YDR012W	Ribosomal 60S subunit protein L4B	physical	1	1	1	Affinity Capture-MS
ULP2	YIL031W	Peptidase that deconjugates Smt3/SUMO-1 peptides from proteins	physical	1	1	1	Affinity Capture-MS
SSB2	YNL209W	Cytoplasmic ATPase that is a ribosome-associated molecular chaperone	physical	1	1	1	Co-purification
PXR1	YGR280C	Essential protein involved in rRNA and snoRNA maturation	physical	1	1	1	Affinity Capture-Western
VAM6	YDL077C	Guanine nucleotide exchange factor for the GTPase Gtr1p	physical	1	1	1	Affinity Capture-MS
RPC82	YPR190C	RNA polymerase III subunit C82	physical	1	1	1	Affinity Capture-MS
PWP2	YCR057C	Conserved 90S pre-ribosomal component	physical	1	1	1	Affinity Capture-MS
UTP5	YDR398W	Subunit of U3-containing Small Subunit (SSU) processome complex	physical	1	1	1	Affinity Capture-MS
RET1	YOR207C	Second-largest subunit of RNA polymerase III	physical	1	1	1	Affinity Capture-MS
UTP14	YML093W	Subunit of U3-containing Small Subunit (SSU) processome complex	physical	1	1	1	Affinity Capture-MS
SAS10	YDL153C	Subunit of U3-containing Small Subunit (SSU) processome complex	physical	1	1	1	Two-hybrid
SEC61	YLR378C	Conserved ER protein translocation channel	physical	1	1	1	Affinity Capture-MS
RPS6A	YPL090C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS12	YOR369C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS20	YHL015W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS15	YOL040C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPL25	YOL127W	Ribosomal 60S subunit protein L25	physical	1	1	1	Affinity Capture-MS
RPL26A	YLR344W	Ribosomal 60S subunit protein L26A	physical	1	1	1	Affinity Capture-MS
RPL31A	YDL075W	Ribosomal 60S subunit protein L31A	physical	1	1	1	Affinity Capture-MS
SMC3	YJL074C	Subunit of the multiprotein cohesin complex	genetic	1	1	1	Synthetic Lethality
RPN6	YDL097C	Essential, non-ATPase regulatory subunit of the 26S proteasome lid	genetic	1	1	1	Positive Genetic
RPN5	YDL147W	Subunit of the CSN and 26S proteasome lid complexes	genetic	1	1	1	Positive Genetic
TSC11	YER093C	Subunit of TORC2 (Tor2p-Lst8p-Avo1-Avo2-Tsc11p-Bit61p)	genetic	1	1	1	Positive Genetic
RSP5	YER125W	NEDD4 family E3 ubiquitin ligase	genetic	1	1	1	Positive Genetic
RPF1	YHR088W	Protein involved in assembly and export of the large ribosomal subunit	genetic	1	1	1	Positive Genetic
URA6	YKL024C	Uridylate kinase	genetic	1	1	1	Positive Genetic
YJU2	YKL095W	Essential protein required for pre-mRNA splicing	genetic	1	1	1	Positive Genetic
RPT1	YKL145W	ATPase of the 19S regulatory particle of the 26S proteasome	genetic	1	1	1	Positive Genetic
RPF2	YKR081C	Essential protein involved in rRNA maturation and ribosomal assembly	genetic	1	1	1	Positive Genetic
RNA14	YMR061W	Component of the cleavage and polyadenylation factor I (CF I)	genetic	1	1	1	Positive Genetic
RNA1	YMR235C	GTPase activating protein (GAP) for Gsp1p	genetic	1	1	1	Positive Genetic
SEC12	YNR026C	Guanine nucleotide exchange factor (GEF)	genetic	1	1	1	Positive Genetic
RPA190	YOR341W	RNA polymerase I largest subunit A190	genetic	1	1	1	Positive Genetic
TIF6	YPR016C	Constituent of 66S pre-ribosomal particles	genetic	1	1	1	Positive Genetic
RPN7	YPR108W	Essential non-ATPase regulatory subunit of the 26S proteasome	genetic	1	1	1	Positive Genetic
SLI15	YBR156C	Subunit of the conserved chromosomal passenger complex (CPC)	genetic	1	1	1	Negative Genetic
USO1	YDL058W	Essential protein involved in vesicle-mediated ER to Golgi transport	genetic	1	1	1	Negative Genetic
SNU23	YDL098C	Component of the U4/U6.U5 snRNP complex	genetic	1	1	1	Negative Genetic
QRI1	YDL103C	UDP-N-acetylglucosamine pyrophosphorylase	genetic	1	1	1	Negative Genetic
SLY1	YDR189W	Hydrophilic protein involved in ER/Golgi vesicle trafficking	genetic	1	1	1	Negative Genetic
TRS23	YDR246W	Core component of transport protein particle (TRAPP) complexes I-III	genetic	1	1	1	Negative Genetic
YHR020W	YHR020W	Prolyl-tRNA synthetase	genetic	1	1	1	Negative Genetic
RRP3	YHR065C	Protein involved in rRNA processing	genetic	1	1	1	Negative Genetic
SUI2	YJR007W	Alpha subunit of the translation initiation factor eIF2	genetic	1	1	1	Negative Genetic
RFC2	YJR068W	Subunit of heteropentameric Replication factor C (RF-C)	genetic	1	1	1	Negative Genetic
UGP1	YKL035W	UDP-glucose pyrophosphorylase (UGPase)	genetic	1	1	1	Negative Genetic
SEC22	YLR268W	R-SNARE protein	genetic	1	1	1	Negative Genetic
VTI1	YMR197C	Protein involved in cis-Golgi membrane traffic	genetic	1	1	1	Negative Genetic
ROT1	YMR200W	Molecular chaperone involved in protein folding in ER	genetic	1	1	1	Negative Genetic
RNT1	YMR239C	Nuclear dsRNA-specific ribonuclease (RNase III)	genetic	1	1	1	Negative Genetic
SPC98	YNL126W	Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex	genetic	1	1	1	Negative Genetic
RIB2	YOL066C	Bifunctional DRAP deaminase tRNA:pseudouridine synthase	genetic	1	1	1	Negative Genetic
UTP23	YOR004W	Component of the small subunit processome	genetic	1	1	1	Negative Genetic
UFE1	YOR075W	t-SNARE protein required for retrograde vesicular traffic	genetic	1	1	1	Negative Genetic
SMP3	YOR149C	Alpha 1,2-mannosyltransferase	genetic	1	1	1	Negative Genetic
TFC8	YPL007C	Subunit of RNA polymerase III transcription initiation factor complex	genetic	1	1	1	Negative Genetic
GUS1	YGL245W	Glutamyl-tRNA synthetase (GluRS)	genetic	1	1	1	Negative Genetic
MAK21	YDR060W	Constituent of 66S pre-ribosomal particles	genetic	1	1	1	Positive Genetic
DED1	YOR204W	ATP-dependent DEAD-box RNA helicase with strand-annealing activity	genetic	1	1	1	Negative Genetic
MED7	YOL135C	Subunit of the RNA polymerase II mediator complex	genetic	1	1	1	Negative Genetic
ACT1	YFL039C	Actin, structural protein in cytoskeleton	genetic	1	1	1	Positive Genetic
KAP95	YLR347C	Karyopherin beta	genetic	1	1	1	Positive Genetic
CFT2	YLR115W	Subunit of the mRNA cleavage and polyadenlylation factor (CPF)	genetic	1	1	1	Positive Genetic
PRE10	YOR362C	Alpha 7 subunit of the 20S proteasome	genetic	1	1	1	Positive Genetic
PRE2	YPR103W	Beta 5 subunit of the 20S proteasome	genetic	1	1	1	Positive Genetic
PRE6	YOL038W	Alpha 4 subunit of the 20S proteasome	physical	1	1	1	Affinity Capture-MS
BCP1	YDR361C	Essential nuclear chaperone for ribosomal protein Rpl23p	genetic	1	1	1	Positive Genetic
NAB2	YGL122C	Nuclear polyadenylated RNA-binding protein	physical	1	1	1	Affinity Capture-RNA
ADE4	YMR300C	Phosphoribosylpyrophosphate amidotransferase (PRPPAT)	physical	1	1	1	Affinity Capture-MS
ARC40	YBR234C	Subunit of the ARP2/3 complex	genetic	1	1	1	Positive Genetic
CDC24	YAL041W	Guanine nucleotide exchange factor (GEF) for Cdc42p	genetic	1	1	1	Negative Genetic
CDC11	YJR076C	Component of the septin ring that is required for cytokinesis	genetic	1	1	1	Negative Genetic
CKS1	YBR135W	Cyclin-dependent protein kinase regulatory subunit and adaptor	genetic	1	1	1	Negative Genetic
EMG1	YLR186W	Methyltransferase for rRNA	genetic	1	1	1	Negative Genetic
ENP1	YBR247C	Protein associated with U3 and U14 snoRNAs	genetic	1	1	1	Negative Genetic
ERO1	YML130C	Thiol oxidase required for oxidative protein folding in the ER	genetic	1	1	1	Negative Genetic
EXO84	YBR102C	Exocyst subunit with dual roles in exocytosis and spliceosome assembly	genetic	1	1	1	Positive Genetic
FIP1	YJR093C	Subunit of cleavage polyadenylation factor (CPF)	genetic	1	1	1	Negative Genetic
CCT4	YDL143W	Subunit of the cytosolic chaperonin Cct ring complex	genetic	1	1	1	Positive Genetic
ESP1	YGR098C	Separase/separin, a caspase-like cysteine protease	physical	1	1	1	Affinity Capture-MS
HHF2	YNL030W	Histone H4	physical	1	1	1	Affinity Capture-MS
ISW1	YBR245C	ATPase subunit of imitation-switch (ISWI) class chromatin remodelers	physical	1	1	1	Affinity Capture-RNA
KRE33	YNL132W	Acetyltransferase required for biogenesis of small ribosomal subunit	genetic	1	1	1	Negative Genetic
MRD1	YPR112C	Essential conserved small ribosomal subunit (40s) synthesis factor	physical	1	1	1	Affinity Capture-MS
CRM1	YGR218W	Nuclear export factor, exportin	genetic	1	1	1	Negative Genetic
LCB1	YMR296C	Component of serine palmitoyltransferase	genetic	1	1	1	Negative Genetic
LSM7	YNL147W	Lsm (Like Sm) protein	genetic	1	1	1	Negative Genetic
MAK5	YBR142W	Essential nucleolar protein	genetic	1	1	1	Positive Genetic
MED11	YMR112C	Subunit of the RNA polymerase II mediator complex	genetic	1	1	1	Negative Genetic
MYO2	YOR326W	Type V myosin motor involved in actin-based transport of cargos	genetic	1	1	1	Negative Genetic
ORC1	YML065W	Largest subunit of the origin recognition complex	genetic	1	1	1	Negative Genetic
HSP82	YPL240C	Hsp90 chaperone	physical	1	1	1	Affinity Capture-MS
NOP14	YDL148C	Nucleolar protein	genetic	1	1	1	Negative Genetic
MED8	YBR193C	Subunit of the RNA polymerase II mediator complex	genetic	1	1	1	Negative Genetic
PRP18	YGR006W	Splicing factor and component of snRNP U5	genetic	1	1	1	Positive Genetic
DIM1	YPL266W	Essential 18S rRNA dimethylase (dimethyladenosine transferase)	genetic	1	1	1	Negative Genetic
CMS1	YLR003C	Putative subunit of the 90S preribosome processome complex	physical	1	1	1	Affinity Capture-MS
NOP6	YDL213C	rRNA-binding protein required for 40S ribosomal subunit biogenesis	physical	1	1	1	Affinity Capture-MS
ERG10	YPL028W	Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase)	genetic	1	1	1	Negative Genetic
CDC37	YDR168W	Essential Hsp90p co-chaperone	genetic	1	1	1	Negative Genetic
GTO1	YGR154C	Omega-class glutathione transferase	physical	1	1	1	Two-hybrid
FAL1	YDR021W	Nucleolar protein required for maturation of 18S rRNA	genetic	1	1	1	Negative Genetic
MAS2	YHR024C	Alpha subunit of the mitochondrial processing protease (MPP)	genetic	1	1	1	Negative Genetic
ERG11	YHR007C	Lanosterol 14-alpha-demethylase	genetic	1	1	1	Negative Genetic
MMS22	YLR320W	Subunit of E3 ubiquitin ligase complex involved in replication repair	physical	1	1	1	Affinity Capture-MS
DAD1	YDR016C	Essential subunit of the Dam1 complex (aka DASH complex)	genetic	1	1	1	Negative Genetic
MOB2	YFL034C-B	Activator of Cbk1p kinase	genetic	1	1	1	Negative Genetic
NUP57	YGR119C	FG-nucleoporin component of central core of the nuclear pore complex	genetic	1	1	1	Positive Genetic
PKC1	YBL105C	Protein serine/threonine kinase	genetic	1	1	1	Negative Genetic
NNF1	YJR112W	Essential component of the outer kinetochore MIND complex	genetic	1	1	1	Negative Genetic
PRP2	YNR011C	RNA-dependent DExD/H-box ATPase	genetic	1	1	1	Negative Genetic
MIF2	YKL089W	Centromeric CDEIII region binding protein	genetic	1	1	1	Positive Genetic
BFR1	YOR198C	Component of mRNP complexes associated with polyribosomes	physical	1	1	1	Affinity Capture-RNA
BRN1	YBL097W	Subunit of the condensin complex	genetic	1	1	1	Negative Genetic
MPS1	YDL028C	Dual-specificity kinase	genetic	1	1	1	Positive Genetic
OST2	YOR103C	Epsilon subunit of the oligosaccharyltransferase complex	genetic	1	1	1	Negative Genetic
MPT5	YGL178W	mRNA-binding protein of the PUF family	physical	1	1	1	Affinity Capture-RNA
DBP6	YNR038W	Essential protein involved in ribosome biogenesis	genetic	1	1	1	Positive Genetic
FAF1	YIL019W	Protein required for pre-rRNA processing	physical	1	1	1	Affinity Capture-MS
GAB1	YLR459W	Subunit of the glycosylphosphatidylinositol transamidase complex	genetic	1	1	1	Negative Genetic
ORC6	YHR118C	Subunit of the origin recognition complex (ORC)	genetic	1	1	1	Negative Genetic
MSS4	YDR208W	Phosphatidylinositol-4-phosphate 5-kinase	genetic	1	1	1	Positive Genetic
BUL2	YML111W	Alpha-arrestin, component of the Rsp5p E3-ubiquitin ligase complex	physical	1	1	1	Affinity Capture-MS
PUF4	YGL014W	Member of the PUF protein family	physical	1	1	1	Affinity Capture-RNA
NOP19	YGR251W	Ribosome biogenesis factor	physical	1	1	1	Affinity Capture-Western
GIS2	YNL255C	Translational activator for mRNAs with internal ribosome entry sites	physical	1	1	1	Affinity Capture-RNA
GAA1	YLR088W	Subunit of the GPI:protein transamidase complex	genetic	1	1	1	Negative Genetic
APJ1	YNL077W	Hsp40 chaperone with a role in SUMO-mediated protein degradation	physical	1	1	1	Affinity Capture-MS
NMT1	YLR195C	N-myristoyl transferase	genetic	1	1	1	Positive Genetic
PUF2	YPR042C	PUF family mRNA-binding protein	physical	1	1	1	Affinity Capture-RNA
GPI13	YLL031C	ER membrane localized phosphoryltransferase	genetic	1	1	1	Negative Genetic
ALG2	YGL065C	Mannosyltransferase in the N-linked glycosylation pathway	genetic	1	1	1	Negative Genetic
CDC1	YDR182W	Putative mannose-ethanolamine phosphate phosphodiesterase	genetic	1	1	1	Negative Genetic
DFR1	YOR236W	Dihydrofolate reductase involved in tetrahydrofolate biosynthesis	genetic	1	1	1	Positive Genetic