| HSP82 | 
                 YPL240C  | 
                 Hsp90 chaperone  | 
                 physical | 
                 3  | 
                 1  | 
                 3  | 
                 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | SSA1 | 
                 YAL005C  | 
                 ATPase involved in protein folding and NLS-directed nuclear transport  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | RAS2 | 
                 YNL098C  | 
                 GTP-binding protein  | 
                 genetic | 
                 2  | 
                 1  | 
                 1  | 
                 Negative Genetic, Negative Genetic  | 
            
            
                | INO2 | 
                 YDR123C  | 
                 Transcription factor  | 
                 genetic | 
                 2  | 
                 1  | 
                 1  | 
                 Negative Genetic, Negative Genetic  | 
            
            
                | CSF1 | 
                 YLR087C  | 
                 Protein with structural similarity to lipid transport protein Vps13p  | 
                 genetic | 
                 2  | 
                 1  | 
                 1  | 
                 Negative Genetic, Negative Genetic  | 
            
            
                | FKH1 | 
                 YIL131C  | 
                 Forkhead family transcription factor  | 
                 regulation | 
                 1  | 
                 1  | 
                 1  | 
                 chromatin immunoprecipitation-chip evidence  | 
            
            
                | SFP1 | 
                 YLR403W  | 
                 Regulates transcription of ribosomal protein and biogenesis genes  | 
                 regulation | 
                 1  | 
                 1  | 
                 1  | 
                 DNA to cDNA expression microarray evidence  | 
            
            
                | IXR1 | 
                 YKL032C  | 
                 Transcriptional repressor that regulates hypoxic genes during normoxia  | 
                 regulation | 
                 1  | 
                 1  | 
                 1  | 
                 DNA to cDNA expression microarray evidence  | 
            
            
                | MED2 | 
                 YDL005C  | 
                 Subunit of the RNA polymerase II mediator complex  | 
                 regulation | 
                 1  | 
                 1  | 
                 1  | 
                 chromatin immunoprecipitation-chip evidence  | 
            
            
                | MED4 | 
                 YOR174W  | 
                 Subunit of the RNA polymerase II mediator complex  | 
                 regulation | 
                 1  | 
                 1  | 
                 1  | 
                 chromatin immunoprecipitation-chip evidence  | 
            
            
                | DED1 | 
                 YOR204W  | 
                 ATP-dependent DEAD-box RNA helicase with strand-annealing activity  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | NPL3 | 
                 YDR432W  | 
                 RNA-binding protein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Synthetic Rescue  | 
            
            
                | RPC19 | 
                 YNL113W  | 
                 RNA polymerase subunit AC19  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | PRP40 | 
                 YKL012W  | 
                 U1 snRNP protein involved in splicing  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Protein-peptide  | 
            
            
                | CCR4 | 
                 YAL021C  | 
                 Component of the CCR4-NOT transcriptional complex  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-RNA  | 
            
            
                | CRM1 | 
                 YGR218W  | 
                 Nuclear export factor, exportin  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | MRP1 | 
                 YDR347W  | 
                 Mitochondrial ribosomal protein of the small subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Proximity Label-MS  | 
            
            
                | MRP7 | 
                 YNL005C  | 
                 Mitochondrial ribosomal protein of the large subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Proximity Label-MS  | 
            
            
                | MRPL28 | 
                 YDR462W  | 
                 Mitochondrial ribosomal protein of the large subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Proximity Label-MS  | 
            
            
                | MRPL4 | 
                 YLR439W  | 
                 Mitochondrial ribosomal protein of the large subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Proximity Label-MS  | 
            
            
                | IES5 | 
                 YER092W  | 
                 Non-essential INO80 chromatin remodeling complex subunit  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | DIG1 | 
                 YPL049C  | 
                 MAP kinase-responsive inhibitor of the Ste12p transcription factor  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | PUB1 | 
                 YNL016W  | 
                 Poly (A)+ RNA-binding protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | PTI1 | 
                 YGR156W  | 
                 Essential component of CPF (cleavage and polyadenylation factor)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | ADE3 | 
                 YGR204W  | 
                 Cytoplasmic trifunctional enzyme  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Phenotypic Enhancement  | 
            
            
                | SNF1 | 
                 YDR477W  | 
                 AMP-activated S/T protein kinase  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Biochemical Activity  | 
            
            
                | SRP54 | 
                 YPR088C  | 
                 Signal recognition particle (SRP) subunit (homolog of mammalian SRP54)  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Co-purification  | 
            
            
                | SGV1 | 
                 YPR161C  | 
                 Cyclin (Bur2p)-dependent protein kinase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | PHO84 | 
                 YML123C  | 
                 High-affinity inorganic phosphate (Pi) transporter  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | QCR2 | 
                 YPR191W  | 
                 Subunit 2 of ubiquinol cytochrome-c reductase (Complex III)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | ADH3 | 
                 YMR083W  | 
                 Mitochondrial alcohol dehydrogenase isozyme III  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | CBP3 | 
                 YPL215W  | 
                 Mitochondrial protein required for assembly of cytochrome bc1 complex  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Proximity Label-MS  | 
            
            
                | ATG1 | 
                 YGL180W  | 
                 Protein serine/threonine kinase  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Biochemical Activity  | 
            
            
                | SNF6 | 
                 YHL025W  | 
                 Subunit of the SWI/SNF chromatin remodeling complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | SSC1 | 
                 YJR045C  | 
                 Hsp70 family ATPase  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | DBF4 | 
                 YDR052C  | 
                 Regulatory subunit of Cdc7p-Dbf4p kinase complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | MDM12 | 
                 YOL009C  | 
                 Mitochondrial outer membrane protein, ERMES complex subunit  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | MPS1 | 
                 YDL028C  | 
                 Dual-specificity kinase  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Reconstituted Complex  | 
            
            
                | SSB2 | 
                 YNL209W  | 
                 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Co-purification  | 
            
            
                | SED1 | 
                 YDR077W  | 
                 Major stress-induced structural GPI-cell wall glycoprotein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | COQ3 | 
                 YOL096C  | 
                 O-methyltransferase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | EHT1 | 
                 YBR177C  | 
                 Octanoyl-CoA:ethanol acyltransferase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | KCS1 | 
                 YDR017C  | 
                 Inositol hexakisphosphate and inositol heptakisphosphate kinase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | SBA1 | 
                 YKL117W  | 
                 Co-chaperone that binds and regulates Hsp90 family chaperones  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Reconstituted Complex  | 
            
            
                | ISR1 | 
                 YPR106W  | 
                 Predicted protein kinase  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | BNA2 | 
                 YJR078W  | 
                 Tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Phenotypic Enhancement  | 
            
            
                | YCK1 | 
                 YHR135C  | 
                 Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Biochemical Activity  | 
            
            
                | WWM1 | 
                 YFL010C  | 
                 WW domain containing protein of unknown function  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Protein-peptide  | 
            
            
                | VAM6 | 
                 YDL077C  | 
                 Guanine nucleotide exchange factor for the GTPase Gtr1p  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | TIM23 | 
                 YNR017W  | 
                 Essential component of the TIM23 complex  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | VMA9 | 
                 YCL005W-A  | 
                 Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | UTP14 | 
                 YML093W  | 
                 Subunit of U3-containing Small Subunit (SSU) processome complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | VPS8 | 
                 YAL002W  | 
                 Membrane-binding component of the CORVET complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | SSM4 | 
                 YIL030C  | 
                 Membrane-embedded ubiquitin-protein ligase and retrotranslocase  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Protein-peptide  | 
            
            
                | MIC60 | 
                 YKR016W  | 
                 Component of the MICOS complex  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | GPI11 | 
                 YDR302W  | 
                 ER membrane protein involved in a late step of GPI anchor assembly  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | ROF1 | 
                 YHR177W  | 
                 Putative transcription factor containing a WOPR domain  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  |