| MYO2 | YOR326W | Type V myosin motor involved in actin-based transport of cargos | physical | 9 | 4 | 5 | Two-hybrid, Two-hybrid, Affinity Capture-Western, Reconstituted Complex, Two-hybrid, Two-hybrid, Two-hybrid, Co-crystal Structure, Reconstituted Complex | 
            
                | FKH1 | YIL131C | Forkhead family transcription factor | regulation | 3 | 3 | 3 | chromatin immunoprecipitation-chip evidence, chromatin immunoprecipitation- exonuclease evidence, ChEC-Seq experiments | 
            
                | GCN2 | YDR283C | Protein kinase | genetic | 3 | 1 | 3 | Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | THR4 | YCR053W | Threonine synthase | genetic | 3 | 1 | 2 | Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | PEX19 | YDL065C | Chaperone and import receptor for newly-synthesized class I PMPs | physical | 2 | 1 | 2 | Two-hybrid, Two-hybrid | 
            
                | SLM1 | YIL105C | Phosphoinositide PI4,5P(2) binding protein, forms a complex with Slm2p | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | HOM3 | YER052C | Aspartate kinase (L-aspartate 4-P-transferase) | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | CBS2 | YDR197W | Mitochondrial translational activator of the COB mRNA | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | HRQ1 | YDR291W | 3'-5' DNA helicase of the conserved RecQ family | genetic | 2 | 2 | 1 | Positive Genetic, Negative Genetic | 
            
                | IXR1 | YKL032C | Transcriptional repressor that regulates hypoxic genes during normoxia | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | FKH2 | YNL068C | Forkhead family transcription factor | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | XBP1 | YIL101C | Transcriptional repressor | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | GLN3 | YER040W | Transcriptional activator in nitrogen catabolite repression system | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | CTF3 | YLR381W | Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ACT1 | YFL039C | Actin, structural protein in cytoskeleton | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CCR4 | YAL021C | Component of the CCR4-NOT transcriptional complex | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | ARP3 | YJR065C | Essential component of the Arp2/3 complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | BUD31 | YCR063W | Component of the SF3b subcomplex of the U2 snRNP | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | DNA2 | YHR164C | ATP-dependent 5'-flap endonuclease and DNA helicase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GCN1 | YGL195W | Positive regulator of the Gcn2p kinase activity | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DHH1 | YDL160C | Cytoplasmic DEAD-box helicase and mRNA decapping activator | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | HRP1 | YOL123W | Subunit of cleavage factor I | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MAK5 | YBR142W | Essential nucleolar protein | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SRP101 | YDR292C | Signal recognition particle (SRP) receptor alpha subunit | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | MYO2 | YOR326W | Type V myosin motor involved in actin-based transport of cargos | genetic | 1 | 1 | 1 | Phenotypic Enhancement | 
            
                | ISW1 | YBR245C | ATPase subunit of imitation-switch (ISWI) class chromatin remodelers | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | MPT5 | YGL178W | mRNA-binding protein of the PUF family | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | VTS1 | YOR359W | Flap-structured DNA-binding and RNA-binding protein | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | RAD61 | YDR014W | Subunit of a complex that inhibits sister chromatid cohesion | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TTI1 | YKL033W | Subunit of the ASTRA complex, involved in chromatin remodeling | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TEL2 | YGR099W | Subunit of the ASTRA complex, involved in chromatin remodeling | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | IZH2 | YOL002C | Plasma membrane receptor for plant antifungal osmotin | genetic | 1 | 1 | 1 | Synthetic Growth Defect | 
            
                | TIM22 | YDL217C | Essential core component of mitochondrial TIM22 complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SEC7 | YDR170C | Guanine nucleotide exchange factor (GEF) for ADP ribosylation factors | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | NUP57 | YGR119C | FG-nucleoporin component of central core of the nuclear pore complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PRP6 | YBR055C | Splicing factor | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TSC13 | YDL015C | Enoyl reductase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PRP11 | YDL043C | Subunit of the SF3a splicing factor complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | QRI1 | YDL103C | UDP-N-acetylglucosamine pyrophosphorylase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MAK21 | YDR060W | Constituent of 66S pre-ribosomal particles | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TFB1 | YDR311W | Subunit of TFIIH and nucleotide excision repair factor 3 complexes | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPB7 | YDR404C | RNA polymerase II subunit B16 | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPN11 | YFR004W | Metalloprotease subunit of 19S regulatory particle | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MAS2 | YHR024C | Alpha subunit of the mitochondrial processing protease (MPP) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PRP21 | YJL203W | Subunit of the SF3a splicing factor complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SEC22 | YLR268W | R-SNARE protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ORC1 | YML065W | Largest subunit of the origin recognition complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TIM23 | YNR017W | Essential component of the TIM23 complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MED4 | YOR174W | Subunit of the RNA polymerase II mediator complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NSL1 | YPL233W | Essential component of the MIND kinetochore complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PRE2 | YPR103W | Beta 5 subunit of the 20S proteasome | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PRP4 | YPR178W | Splicing factor | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SKN1 | YGR143W | Protein involved in sphingolipid biosynthesis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPL24B | YGR148C | Ribosomal 60S subunit protein L24B | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RIM4 | YHL024W | Putative RNA-binding protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VRP1 | YLR337C | Verprolin, proline-rich actin-associated protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VPS41 | YDR080W | Subunit of the HOPS endocytic tethering complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | STB5 | YHR178W | Transcription factor | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | KCH1 | YJR054W | Potassium transporter that mediates K+ influx | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPL22A | YLR061W | Ribosomal 60S subunit protein L22A | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ORM2 | YLR350W | Protein that mediates sphingolipid homeostasis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VAC7 | YNL054W | Integral vacuolar membrane protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ZWF1 | YNL241C | Glucose-6-phosphate dehydrogenase (G6PD) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VMA13 | YPR036W | Subunit H of the V1 peripheral membrane domain of V-ATPase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SER1 | YOR184W | 3-phosphoserine aminotransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SGS1 | YMR190C | RecQ family nucleolar DNA helicase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DOA4 | YDR069C | Ubiquitin hydrolase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ACE2 | YLR131C | Transcription factor required for septum destruction after cytokinesis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DTD1 | YDL219W | D-Tyr-tRNA(Tyr) deacylase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CDC13 | YDL220C | Single stranded DNA-binding protein found at TG1-3 telomere G-tails | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HYP2 | YEL034W | Translation elongation factor eIF-5A | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CDC53 | YDL132W | Cullin | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ATG12 | YBR217W | Ubiquitin-like modifier involved in autophagy and the Cvt pathway | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CDC20 | YGL116W | Activator of anaphase-promoting complex/cyclosome (APC/C) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GLE1 | YDL207W | Cytoplasmic nucleoporin required for polyadenylated mRNA export | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | EAP1 | YKL204W | eIF4E-associated protein, competes with eIF4G for binding to eIF4E | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | FAR3 | YMR052W | Protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CDC21 | YOR074C | Thymidylate synthase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CSE4 | YKL049C | Centromeric histone H3-like protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HTD2 | YHR067W | Mitochondrial 3-hydroxyacyl-thioester dehydratase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CAB1 | YDR531W | Pantothenate kinase, ATP:D-pantothenate 4'-phosphotransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GPI11 | YDR302W | ER membrane protein involved in a late step of GPI anchor assembly | genetic | 1 | 1 | 1 | Negative Genetic |