Standard name Systematic name Name description Description
VTS1 YOR359W Flap-structured DNA-binding and RNA-binding protein Flap-structured DNA-binding and RNA-binding protein; stimulates deadenylation-dependent mRNA degradation mediated by the CCR4-NOT deadenylase complex; member of the Smaug (Smg) family of post-transcriptional regulators which bind RNA through a conserved sterile alpha motif (SAM) domain that interacts with Smg recognition element (SREs) containing transcripts; stimulates Dna2p endonuclease activity; forms [SMAUG+] prion
Visualize the interactome of VTS1
Links to external databases:
SGD   |   KEGG   |  

Cell cycle phase and timing of transcription peak

Cell cycle phase Time (min)

CYCLoPs localization & abundance

WT1 WT2 WT3
Cytoplasm 1.0 0.99 0.978

GFP localization & abundance

GFP localization GFP abundance
cytoplasm 3200

GO term count

Metabolism Cell cycle Cell division Signal transduction DNA replication
VTS1 6 0 0 0 0

List of interactors

Use the search utility to find the interactor you are looking for. By clicking the column headers the table will be sorted on that column. Use shift+click to sort on multiple columns. Default sorting is on number of experiments, number of unique methods and the number of publications, and alphabetical on standard name, in that order.
Standard name Systematic name Name description Type #Experiments #Methods #Publications Evidence
MPT5 YGL178W mRNA-binding protein of the PUF family physical 3 1 3 Affinity Capture-RNA, Affinity Capture-RNA, Affinity Capture-RNA
TMA46 YOR091W Protein of unknown function that associates with translating ribosomes physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
GEM1 YAL048C Outer mitochondrial membrane GTPase, subunit of the ERMES complex genetic 2 2 2 Synthetic Growth Defect, Negative Genetic
SIN4 YNL236W Subunit of the RNA polymerase II mediator complex genetic 2 1 2 Negative Genetic, Negative Genetic
DHH1 YDL160C Cytoplasmic DEAD-box helicase and mRNA decapping activator physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
CSE2 YNR010W Subunit of the RNA polymerase II mediator complex genetic 2 1 2 Negative Genetic, Negative Genetic
PRP4 YPR178W Splicing factor genetic 2 1 2 Negative Genetic, Negative Genetic
HIR2 YOR038C Subunit of HIR nucleosome assembly complex genetic 2 1 2 Negative Genetic, Negative Genetic
SRN2 YLR119W Component of the ESCRT-I complex genetic 2 1 2 Negative Genetic, Negative Genetic
VPS38 YLR360W Part of a Vps34p phosphatidylinositol 3-kinase complex genetic 2 1 2 Negative Genetic, Negative Genetic
ORM2 YLR350W Protein that mediates sphingolipid homeostasis genetic 2 1 2 Negative Genetic, Negative Genetic
OKP1 YGR179C Outer kinetochore protein required for accurate chromosome segregation genetic 2 1 2 Negative Genetic, Negative Genetic
PSD1 YNL169C Phosphatidylserine decarboxylase of the mitochondrial inner membrane genetic 2 1 2 Positive Genetic, Positive Genetic
ACT1 YFL039C Actin, structural protein in cytoskeleton genetic 2 2 1 Positive Genetic, Negative Genetic
SFP1 YLR403W Regulates transcription of ribosomal protein and biogenesis genes regulation 1 1 1 DNA to cDNA expression microarray evidence
IXR1 YKL032C Transcriptional repressor that regulates hypoxic genes during normoxia regulation 1 1 1 DNA to cDNA expression microarray evidence
MED2 YDL005C Subunit of the RNA polymerase II mediator complex regulation 1 1 1 chromatin immunoprecipitation-chip evidence
STP1 YDR463W Transcription factor regulation 1 1 1 chromatin immunoprecipitation-chip evidence
TFC7 YOR110W RNA pol III transcription initiation factor complex (TFIIIC) subunit regulation 1 1 1 chromatin immunoprecipitation-chip evidence
CWC2 YDL209C Member of the NineTeen Complex (NTC) physical 1 1 1 Affinity Capture-RNA
RPO21 YDL140C RNA polymerase II largest subunit B220 physical 1 1 1 Affinity Capture-RNA
RPL10 YLR075W Ribosomal 60S subunit protein L10 genetic 1 1 1 Negative Genetic
IPI1 YHR085W Component of the Rix1 complex and possibly pre-replicative complexes genetic 1 1 1 Positive Genetic
TRZ1 YKR079C tRNA 3'-end processing endonuclease tRNase Z physical 1 1 1 Affinity Capture-RNA
POP1 YNL221C Subunit of RNase MRP, nuclear RNase P and telomerase complexes physical 1 1 1 Affinity Capture-Western
BRR2 YER172C RNA-dependent ATPase RNA helicase (DEIH box) genetic 1 1 1 Negative Genetic
DBP7 YKR024C Putative ATP-dependent RNA helicase of the DEAD-box family genetic 1 1 1 Negative Genetic
RAT1 YOR048C Nuclear 5' to 3' single-stranded RNA exonuclease genetic 1 1 1 Positive Genetic
LSM6 YDR378C Lsm (Like Sm) protein genetic 1 1 1 Positive Genetic
PAB1 YER165W Poly(A) binding protein physical 1 1 1 Affinity Capture-RNA
IML1 YJR138W GTPase-activating protein (GAP) subunit of the Iml1p/SEACIT complex physical 1 1 1 Affinity Capture-RNA
CDC33 YOL139C Translation initiation factor eIF4E physical 1 1 1 Affinity Capture-Western
DIS3 YOL021C Exosome core complex catalytic subunit genetic 1 1 1 Negative Genetic
RRP8 YDR083W Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase genetic 1 1 1 Negative Genetic
PFS2 YNL317W Integral subunit of the pre-mRNA CPF complex physical 1 1 1 Affinity Capture-RNA
PRE1 YER012W Beta 4 subunit of the 20S proteasome genetic 1 1 1 Negative Genetic
AAH1 YNL141W Adenine deaminase (adenine aminohydrolase) genetic 1 1 1 Negative Genetic
CCR4 YAL021C Component of the CCR4-NOT transcriptional complex physical 1 1 1 Affinity Capture-RNA
PUS1 YPL212C tRNA:pseudouridine synthase physical 1 1 1 Affinity Capture-RNA
APC1 YNL172W Largest subunit of the Anaphase-Promoting Complex/Cyclosome physical 1 1 1 Affinity Capture-RNA
ARP3 YJR065C Essential component of the Arp2/3 complex genetic 1 1 1 Negative Genetic
BDF1 YLR399C BET family transcriptional regulator physical 1 1 1 Affinity Capture-RNA
BDF1 YLR399C BET family transcriptional regulator genetic 1 1 1 Negative Genetic
BOI2 YER114C Protein involved in polar growth physical 1 1 1 Affinity Capture-RNA
ERG26 YGL001C C-3 sterol dehydrogenase genetic 1 1 1 Negative Genetic
CDC55 YGL190C Regulatory subunit B of protein phosphatase 2A (PP2A) genetic 1 1 1 Negative Genetic
HDA1 YNL021W Catalytic subunit of class II HDA1 histone deacetylase complex genetic 1 1 1 Positive Genetic
TIF6 YPR016C Constituent of 66S pre-ribosomal particles genetic 1 1 1 Negative Genetic
COX4 YGL187C Subunit IV of cytochrome c oxidase physical 1 1 1 Affinity Capture-RNA
DCP1 YOL149W Subunit of the Dcp1p-Dcp2p decapping enzyme complex genetic 1 1 1 Negative Genetic
DNA2 YHR164C ATP-dependent 5'-flap endonuclease and DNA helicase genetic 1 1 1 Dosage Rescue
DOA1 YKL213C WD-repeat protein involved in ubiquitin-mediated protein degradation physical 1 1 1 Affinity Capture-RNA
ENP1 YBR247C Protein associated with U3 and U14 snoRNAs physical 1 1 1 Affinity Capture-RNA
ERG13 YML126C 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase physical 1 1 1 Affinity Capture-RNA
GCN2 YDR283C Protein kinase physical 1 1 1 Affinity Capture-RNA
ERV25 YML012W Member of the p24 family involved in ER to Golgi transport genetic 1 1 1 Negative Genetic
IOC3 YFR013W Subunit of the Isw1a complex physical 1 1 1 Affinity Capture-RNA
ISW1 YBR245C ATPase subunit of imitation-switch (ISWI) class chromatin remodelers physical 1 1 1 Affinity Capture-RNA
ISW1 YBR245C ATPase subunit of imitation-switch (ISWI) class chromatin remodelers genetic 1 1 1 Negative Genetic
LCB2 YDR062W Component of serine palmitoyltransferase physical 1 1 1 Affinity Capture-RNA
INP2 YMR163C Peroxisome-specific receptor important for peroxisome inheritance physical 1 1 1 Affinity Capture-RNA
MCM5 YLR274W Component of the Mcm2-7 hexameric helicase complex physical 1 1 1 Affinity Capture-RNA
MLH1 YMR167W Protein required for mismatch repair in mitosis and meiosis genetic 1 1 1 Positive Genetic
MSH3 YCR092C Mismatch repair protein physical 1 1 1 Affinity Capture-RNA
CMR1 YDL156W Nuclear protein with role in transcription, protein quality control physical 1 1 1 Affinity Capture-MS
MUM2 YBR057C Protein essential for meiotic DNA replication and sporulation physical 1 1 1 Affinity Capture-RNA
MYO1 YHR023W Type II myosin heavy chain physical 1 1 1 Affinity Capture-RNA
KCC4 YCL024W Protein kinase of the bud neck involved in the septin checkpoint physical 1 1 1 Affinity Capture-RNA
MIS1 YBR084W Mitochondrial C1-tetrahydrofolate synthase genetic 1 1 1 Negative Genetic
AFG2 YLR397C ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex physical 1 1 1 Affinity Capture-RNA
MGS1 YNL218W Protein with DNA-dependent ATPase and ssDNA annealing activities physical 1 1 1 Affinity Capture-RNA
LPD1 YFL018C Dihydrolipoamide dehydrogenase physical 1 1 1 Affinity Capture-RNA
IDH2 YOR136W Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase genetic 1 1 1 Negative Genetic
CWC22 YGR278W Spliceosome-associated protein that is required for pre-mRNA splicing physical 1 1 1 Affinity Capture-RNA
MDS3 YGL197W Putative component of the TOR regulatory pathway physical 1 1 1 Affinity Capture-RNA
PUB1 YNL016W Poly (A)+ RNA-binding protein physical 1 1 1 Affinity Capture-MS
MVD1 YNR043W Mevalonate pyrophosphate decarboxylase physical 1 1 1 Affinity Capture-RNA
PTI1 YGR156W Essential component of CPF (cleavage and polyadenylation factor) physical 1 1 1 Affinity Capture-RNA
FYV8 YGR196C Protein of unknown function genetic 1 1 1 Negative Genetic
MRPL6 YHR147C Mitochondrial ribosomal protein of the large subunit genetic 1 1 1 Negative Genetic
PGD1 YGL025C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
RPD3 YNL330C Histone deacetylase, component of both the Rpd3S and Rpd3L complexes genetic 1 1 1 Positive Genetic
RRI1 YDL216C Catalytic subunit of the COP9 signalosome (CSN) complex physical 1 1 1 Affinity Capture-RNA
VPS51 YKR020W Component of the GARP (Golgi-associated retrograde protein) complex genetic 1 1 1 Negative Genetic
ANP1 YEL036C Subunit of the alpha-1,6 mannosyltransferase complex genetic 1 1 1 Positive Genetic
CDC25 YLR310C Membrane bound guanine nucleotide exchange factor physical 1 1 1 Affinity Capture-RNA
SNU66 YOR308C Component of the U4/U6.U5 snRNP complex physical 1 1 1 Affinity Capture-RNA
CRN1 YLR429W Coronin physical 1 1 1 Affinity Capture-RNA
ROM2 YLR371W Guanine nucleotide exchange factor (GEF) for Rho1p and Rho2p genetic 1 1 1 Positive Genetic
TAF5 YBR198C Subunit (90 kDa) of TFIID and SAGA complexes genetic 1 1 1 Negative Genetic
MGA2 YIR033W ER membrane protein involved in regulation of OLE1 transcription genetic 1 1 1 Negative Genetic
TPS1 YBR126C Synthase subunit of trehalose-6-P synthase/phosphatase complex physical 1 1 1 Affinity Capture-RNA
TPS1 YBR126C Synthase subunit of trehalose-6-P synthase/phosphatase complex genetic 1 1 1 Negative Genetic
HSE1 YHL002W Subunit of the endosomal Vps27p-Hse1p complex genetic 1 1 1 Negative Genetic
VPS53 YJL029C Component of the GARP (Golgi-associated retrograde protein) complex genetic 1 1 1 Negative Genetic
BDH2 YAL061W Putative medium-chain alcohol dehydrogenase with similarity to BDH1 physical 1 1 1 Affinity Capture-RNA
SET1 YHR119W Histone methyltransferase, subunit of the COMPASS (Set1C) complex genetic 1 1 1 Negative Genetic
SDC1 YDR469W Subunit of the COMPASS (Set1C) complex genetic 1 1 1 Negative Genetic
SPP1 YPL138C Subunit of COMPASS (Set1C) physical 1 1 1 Affinity Capture-RNA
HEK2 YBL032W RNA binding protein involved in asymmetric localization of ASH1 mRNA physical 1 1 1 Affinity Capture-RNA
BNA3 YJL060W Kynurenine aminotransferase genetic 1 1 1 Negative Genetic
LPL1 YOR059C Phospholipase genetic 1 1 1 Negative Genetic
PUF3 YLL013C Protein of the mitochondrial outer surface physical 1 1 1 Affinity Capture-RNA
NTE1 YML059C Serine esterase physical 1 1 1 Affinity Capture-RNA
FAR11 YNL127W Protein involved in recovery from cell cycle arrest genetic 1 1 1 Negative Genetic
TRM112 YNR046W Protein involved in methylation of tRNA, rRNA, and translation factors physical 1 1 1 Affinity Capture-RNA
DNM1 YLL001W Dynamin-related GTPase involved in mitochondrial organization genetic 1 1 1 Negative Genetic
ACO1 YLR304C Aconitase physical 1 1 1 Affinity Capture-RNA
ACH1 YBL015W Protein with CoA transferase activity physical 1 1 1 Affinity Capture-RNA
HYP2 YEL034W Translation elongation factor eIF-5A genetic 1 1 1 Negative Genetic
PHO85 YPL031C Cyclin-dependent kinase physical 1 1 1 Biochemical Activity
RIM15 YFL033C Protein kinase involved in cell proliferation in response to nutrients genetic 1 1 1 Negative Genetic
ATG17 YLR423C Scaffold protein responsible for phagophore assembly site organization physical 1 1 1 Affinity Capture-RNA
PRB1 YEL060C Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity physical 1 1 1 Affinity Capture-RNA
DMA2 YNL116W Ubiquitin-protein ligase (E3) genetic 1 1 1 Positive Genetic
FET3 YMR058W Ferro-O2-oxidoreductase physical 1 1 1 Affinity Capture-RNA
FAA4 YMR246W Long chain fatty acyl-CoA synthetase physical 1 1 1 Affinity Capture-RNA
POR1 YNL055C Mitochondrial porin (voltage-dependent anion channel) genetic 1 1 1 Negative Genetic
FKH1 YIL131C Forkhead family transcription factor physical 1 1 1 Affinity Capture-RNA
PMA2 YPL036W Plasma membrane H+-ATPase genetic 1 1 1 Negative Genetic
RGP1 YDR137W Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p) genetic 1 1 1 Negative Genetic
EGD1 YPL037C Subunit beta1 of the nascent polypeptide-associated complex (NAC) genetic 1 1 1 Negative Genetic
ENV7 YPL236C Vacuolar membrane protein kinase physical 1 1 1 Affinity Capture-RNA
CLN1 YMR199W G1 cyclin involved in regulation of the cell cycle physical 1 1 1 Affinity Capture-RNA
ARP10 YDR106W Component of the dynactin complex physical 1 1 1 Affinity Capture-RNA
COF1 YLL050C Cofilin, involved in pH-dependent actin filament depolarization genetic 1 1 1 Negative Genetic
GPD1 YDL022W NAD-dependent glycerol-3-phosphate dehydrogenase physical 1 1 1 Affinity Capture-RNA
FAR1 YJL157C CDK inhibitor and nuclear anchor physical 1 1 1 Affinity Capture-RNA
SES1 YDR023W Cytosolic seryl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
RAS1 YOR101W GTPase involved in G-protein signaling in adenylate cyclase activation physical 1 1 1 Affinity Capture-RNA
AXL1 YPR122W Haploid specific endoprotease of a-factor mating pheromone genetic 1 1 1 Negative Genetic
ARG4 YHR018C Argininosuccinate lyase physical 1 1 1 Affinity Capture-RNA
LIA1 YJR070C Deoxyhypusine hydroxylase genetic 1 1 1 Negative Genetic
AYR1 YIL124W Bifunctional triacylglycerol lipase and 1-acyl DHAP reductase physical 1 1 1 Affinity Capture-RNA
PBR1 YNL181W Putative oxidoreductase genetic 1 1 1 Positive Genetic
PAC11 YDR488C Dynein intermediate chain, microtubule motor protein physical 1 1 1 Affinity Capture-RNA
MTC5 YDR128W Subunit of SEACAT, a subcomplex of the SEA complex physical 1 1 1 Affinity Capture-RNA
ELM1 YKL048C Serine/threonine protein kinase genetic 1 1 1 Negative Genetic
GUF1 YLR289W Mitochondrial matrix GTPase genetic 1 1 1 Negative Genetic
CAT5 YOR125C Protein required for ubiquinone (Coenzyme Q) biosynthesis physical 1 1 1 Affinity Capture-RNA
SGS1 YMR190C RecQ family nucleolar DNA helicase genetic 1 1 1 Negative Genetic
FHL1 YPR104C Regulator of ribosomal protein (RP) transcription genetic 1 1 1 Negative Genetic
SHP1 YBL058W UBX domain-containing substrate adaptor for Cdc48p physical 1 1 1 Affinity Capture-RNA
PDC5 YLR134W Minor isoform of pyruvate decarboxylase physical 1 1 1 Affinity Capture-RNA
POL30 YBR088C Proliferating cell nuclear antigen (PCNA) genetic 1 1 1 Positive Genetic
CDC37 YDR168W Essential Hsp90p co-chaperone genetic 1 1 1 Negative Genetic
RVS167 YDR388W Calmodulin-binding actin-associated protein genetic 1 1 1 Negative Genetic
RAD6 YGL058W Ubiquitin-conjugating enzyme (E2) physical 1 1 1 Affinity Capture-RNA
CTF13 YMR094W Subunit of the CBF3 complex physical 1 1 1 Two-hybrid
DNL4 YOR005C DNA ligase required for nonhomologous end-joining (NHEJ) genetic 1 1 1 Negative Genetic
PTC7 YHR076W Type 2C serine/threonine protein phosphatase (PP2C) physical 1 1 1 Affinity Capture-RNA
RAD24 YER173W Checkpoint protein physical 1 1 1 Affinity Capture-RNA
LAS1 YKR063C Endonuclease involved in pre-rRNA processing at both ends of ITS2 genetic 1 1 1 Negative Genetic
GIS4 YML006C CAAX box containing protein of unknown function physical 1 1 1 Affinity Capture-RNA
FAA1 YOR317W Long chain fatty acyl-CoA synthetase physical 1 1 1 Affinity Capture-RNA
ACS1 YAL054C Acetyl-coA synthetase isoform physical 1 1 1 Affinity Capture-RNA
HHT1 YBR010W Histone H3 physical 1 1 1 Affinity Capture-MS
VPS35 YJL154C Endosomal subunit of membrane-associated retromer complex genetic 1 1 1 Negative Genetic
IRA1 YBR140C GTPase-activating protein physical 1 1 1 Affinity Capture-RNA
DPB11 YJL090C DNA replication initiation protein genetic 1 1 1 Negative Genetic
SLT2 YHR030C Serine/threonine MAP kinase genetic 1 1 1 Negative Genetic
SGT1 YOR057W Cochaperone protein genetic 1 1 1 Negative Genetic
BCK2 YER167W Serine/threonine-rich protein involved in PKC1 signaling pathway physical 1 1 1 Affinity Capture-RNA
OPY1 YBR129C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RAD14 YMR201C Subunit of Nucleotide Excision Repair Factor 1 (NEF1) genetic 1 1 1 Positive Genetic
SDP1 YIL113W Stress-inducible dual-specificity MAP kinase phosphatase physical 1 1 1 Affinity Capture-RNA
STB4 YMR019W Putative transcription factor genetic 1 1 1 Positive Genetic
ECM33 YBR078W GPI-anchored protein involved in efficient glucose uptake physical 1 1 1 Affinity Capture-RNA
GSY1 YFR015C Glycogen synthase physical 1 1 1 Affinity Capture-RNA
VAN1 YML115C Component of the mannan polymerase I genetic 1 1 1 Positive Genetic
SSN8 YNL025C Cyclin-like component of RNA polymerase II holoenzyme genetic 1 1 1 Negative Genetic
LSM8 YJR022W Lsm (Like Sm) protein genetic 1 1 1 Positive Genetic
APA1 YCL050C AP4A phosphorylase physical 1 1 1 Affinity Capture-RNA
EAP1 YKL204W eIF4E-associated protein, competes with eIF4G for binding to eIF4E physical 1 1 1 Affinity Capture-Western
SWM1 YDR260C Subunit of the anaphase-promoting complex (APC) physical 1 1 1 Affinity Capture-RNA
PTC6 YCR079W Mitochondrial type 2C protein phosphatase (PP2C) physical 1 1 1 Affinity Capture-RNA
MMS4 YBR098W Subunit of structure-specific Mms4p-Mus81p endonuclease physical 1 1 1 Affinity Capture-RNA
AVT2 YEL064C Putative transporter physical 1 1 1 Affinity Capture-RNA
MIC19 YFR011C Component of the MICOS complex genetic 1 1 1 Negative Genetic
FCF1 YDR339C PINc domain endonuclease genetic 1 1 1 Positive Genetic
RAD26 YJR035W Protein involved in transcription-coupled nucleotide excision repair physical 1 1 1 Affinity Capture-RNA
GCR2 YNL199C Transcriptional activator of genes involved in glycolysis genetic 1 1 1 Negative Genetic
CDH1 YGL003C Activator of anaphase-promoting complex/cyclosome (APC/C) physical 1 1 1 Affinity Capture-RNA
HFL1 YKR051W Vacuole membrane protein that interacts with Atg8p physical 1 1 1 Affinity Capture-RNA
MGT1 YDL200C DNA repair methyltransferase (6-O-methylguanine-DNA methylase) physical 1 1 1 Affinity Capture-RNA
UBC4 YBR082C Ubiquitin-conjugating enzyme (E2) genetic 1 1 1 Negative Genetic
BIR1 YJR089W Subunit of chromosomal passenger complex (CPC) genetic 1 1 1 Positive Genetic
PSO2 YMR137C Nuclease required for DNA single- and double-strand break repair genetic 1 1 1 Negative Genetic
MMS22 YLR320W Subunit of E3 ubiquitin ligase complex involved in replication repair physical 1 1 1 Affinity Capture-RNA
DDI1 YER143W Aspartic-type endopeptidase genetic 1 1 1 Negative Genetic
CDD1 YLR245C Cytidine deaminase genetic 1 1 1 Negative Genetic
EBS1 YDR206W Protein involved in translation inhibition and nonsense-mediated decay physical 1 1 1 Affinity Capture-RNA
DCI1 YOR180C Peroxisomal protein physical 1 1 1 Affinity Capture-RNA
GDH1 YOR375C NADP(+)-dependent glutamate dehydrogenase physical 1 1 1 Affinity Capture-RNA
ARG81 YML099C Zinc finger transcription factor involved in arginine-responsive genes genetic 1 1 1 Negative Genetic
IRE1 YHR079C Serine-threonine kinase and endoribonuclease physical 1 1 1 Affinity Capture-RNA
LST7 YGR057C Subunit of the Lst4p-Lst7p GTPase activating protein complex for Gtr2p genetic 1 1 1 Negative Genetic
MCM16 YPR046W Component of the Ctf19 complex and the COMA subcomplex genetic 1 1 1 Negative Genetic
MOB2 YFL034C-B Activator of Cbk1p kinase genetic 1 1 1 Negative Genetic
MSN5 YDR335W Karyopherin physical 1 1 1 Two-hybrid
HSP10 YOR020C Mitochondrial matrix co-chaperonin genetic 1 1 1 Negative Genetic
ALY2 YJL084C Alpha arrestin, Ub-ligase adaptor for Rsp5p physical 1 1 1 Affinity Capture-RNA
PEX18 YHR160C Peroxin physical 1 1 1 Affinity Capture-RNA
PUT4 YOR348C Proline permease physical 1 1 1 Affinity Capture-RNA
GNP1 YDR508C Broad specificity amino acid permease physical 1 1 1 Affinity Capture-RNA
NBA1 YOL070C Protein involved in axial bud site selection physical 1 1 1 Affinity Capture-RNA
TOP1 YOL006C Topoisomerase I genetic 1 1 1 Negative Genetic
STB2 YMR053C Protein that interacts with Sin3p in a two-hybrid assay physical 1 1 1 Affinity Capture-RNA
SLM1 YIL105C Phosphoinositide PI4,5P(2) binding protein, forms a complex with Slm2p physical 1 1 1 Affinity Capture-RNA
ASK1 YKL052C Essential subunit of the Dam1 complex (aka DASH complex) physical 1 1 1 Affinity Capture-RNA
NNF1 YJR112W Essential component of the outer kinetochore MIND complex physical 1 1 1 Affinity Capture-RNA
TFC4 YGR047C Subunit of RNA polymerase III transcription initiation factor complex physical 1 1 1 Affinity Capture-RNA
CHL1 YPL008W Probable DNA helicase physical 1 1 1 Affinity Capture-RNA
RPS5 YJR123W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RTG1 YOL067C Transcription factor (bHLH) involved in interorganelle communication physical 1 1 1 Affinity Capture-RNA
CRP1 YHR146W Protein that binds to cruciform DNA structures physical 1 1 1 Affinity Capture-RNA
SWC5 YBR231C Component of the SWR1 complex genetic 1 1 1 Positive Genetic
SAS3 YBL052C Histone acetyltransferase catalytic subunit of NuA3 complex genetic 1 1 1 Negative Genetic
HPC2 YBR215W Subunit of the HIR complex genetic 1 1 1 Positive Genetic
CBF1 YJR060W Basic helix-loop-helix (bHLH) protein genetic 1 1 1 Negative Genetic
STE5 YDR103W Pheromone-responsive MAPK scaffold protein physical 1 1 1 Affinity Capture-RNA
STB1 YNL309W Protein with role in regulation of MBF-specific transcription at Start physical 1 1 1 Affinity Capture-RNA
TOR2 YKL203C PIK-related protein kinase and rapamycin target physical 1 1 1 Affinity Capture-RNA
BUB1 YGR188C Protein kinase involved in the cell cycle checkpoint into anaphase genetic 1 1 1 Positive Genetic
CLC1 YGR167W Clathrin light chain genetic 1 1 1 Negative Genetic
EXO1 YOR033C 5'-3' exonuclease and flap-endonuclease genetic 1 1 1 Negative Genetic
MDM12 YOL009C Mitochondrial outer membrane protein, ERMES complex subunit genetic 1 1 1 Negative Genetic
PUP1 YOR157C Beta 2 subunit of the 20S proteasome physical 1 1 1 Affinity Capture-RNA
RPA14 YDR156W RNA polymerase I subunit A14 genetic 1 1 1 Positive Genetic
SAS4 YDR181C Subunit of the SAS complex (Sas2p, Sas4p, Sas5p) physical 1 1 1 Affinity Capture-RNA
SIZ1 YDR409W SUMO E3 ligase physical 1 1 1 Affinity Capture-RNA
RAV2 YDR202C Subunit of RAVE complex (Rav1p, Rav2p, Skp1p) genetic 1 1 1 Negative Genetic
USE1 YGL098W Essential SNARE protein localized to the ER genetic 1 1 1 Negative Genetic
SSA1 YAL005C ATPase involved in protein folding and NLS-directed nuclear transport physical 1 1 1 Affinity Capture-RNA
TUB4 YLR212C Gamma-tubulin genetic 1 1 1 Synthetic Rescue
TIP20 YGL145W Peripheral membrane protein required for COPI vesicle fusion to the ER physical 1 1 1 Affinity Capture-RNA
MGM1 YOR211C Mitochondrial GTPase, present in complex with Ugo1p and Fzo1p physical 1 1 1 Affinity Capture-RNA
VTI1 YMR197C Protein involved in cis-Golgi membrane traffic genetic 1 1 1 Dosage Rescue
CCZ1 YBR131W Subunit of a heterodimeric guanine nucleotide exchange factor (GEF) genetic 1 1 1 Negative Genetic
CST9 YLR394W SUMO E3 ligase genetic 1 1 1 Negative Genetic
BBP1 YPL255W Protein required for the spindle pole body (SPB) duplication physical 1 1 1 Affinity Capture-RNA
DPH1 YIL103W Protein required for synthesis of diphthamide genetic 1 1 1 Negative Genetic
CIN1 YOR349W Tubulin folding factor D involved in beta-tubulin (Tub2p) folding physical 1 1 1 Affinity Capture-RNA
PHO2 YDL106C Homeobox transcription factor genetic 1 1 1 Negative Genetic
HAP1 YLR256W Zinc finger transcription factor physical 1 1 1 Affinity Capture-RNA
IMP1 YMR150C Catalytic subunit of mitochondrial inner membrane peptidase complex genetic 1 1 1 Negative Genetic
BUD8 YLR353W Protein involved in bud-site selection physical 1 1 1 Affinity Capture-RNA
GLN3 YER040W Transcriptional activator in nitrogen catabolite repression system physical 1 1 1 Affinity Capture-RNA
PCL1 YNL289W Cyclin, interacts with cyclin-dependent kinase Pho85p physical 1 1 1 Affinity Capture-RNA
GAP1 YKR039W General amino acid permease physical 1 1 1 Affinity Capture-RNA
CSG2 YBR036C Endoplasmic reticulum membrane protein physical 1 1 1 Affinity Capture-RNA
GAL80 YML051W Transcriptional regulator involved in the repression of GAL genes physical 1 1 1 Two-hybrid
VPS4 YPR173C AAA-ATPase involved in multivesicular body (MVB) protein sorting genetic 1 1 1 Negative Genetic
AFI1 YOR129C Arf3p polarization-specific docking factor genetic 1 1 1 Negative Genetic
ESC2 YDR363W Sumo-like domain protein physical 1 1 1 Affinity Capture-RNA
GPB2 YAL056W Multistep regulator of cAMP-PKA signaling physical 1 1 1 Affinity Capture-RNA
DSE1 YER124C Daughter cell-specific protein physical 1 1 1 Affinity Capture-RNA
HMT1 YBR034C Nuclear SAM-dependent mono- and asymmetric methyltransferase physical 1 1 1 PCA
MET28 YIR017C bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex physical 1 1 1 Affinity Capture-RNA
HKR1 YDR420W Mucin family member that functions as an osmosensor in the HOG pathway physical 1 1 1 Affinity Capture-RNA
PET494 YNR045W Mitochondrial translational activator specific for the COX3 mRNA genetic 1 1 1 Negative Genetic
GPR1 YDL035C Plasma membrane G protein coupled receptor (GPCR) physical 1 1 1 Affinity Capture-RNA
CMR2 YOR093C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SST2 YLR452C GTPase-activating protein for Gpa1p genetic 1 1 1 Negative Genetic
TEA1 YOR337W Ty1 enhancer activator involved in Ty enhancer-mediated transcription physical 1 1 1 Affinity Capture-RNA
MIX17 YMR002W Mitochondrial intermembrane space protein physical 1 1 1 Affinity Capture-RNA
GTT2 YLL060C Glutathione S-transferase capable of homodimerization physical 1 1 1 Affinity Capture-RNA
REV3 YPL167C Catalytic subunit of DNA polymerase zeta physical 1 1 1 Affinity Capture-RNA
CCH1 YGR217W Voltage-gated high-affinity calcium channel physical 1 1 1 Affinity Capture-RNA
GAT1 YFL021W Transcriptional activator of nitrogen catabolite repression genes physical 1 1 1 Affinity Capture-RNA
HHT2 YNL031C Histone H3 physical 1 1 1 Affinity Capture-MS
ASH1 YKL185W Component of the Rpd3L histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
ERT1 YBR239C Transcriptional regulator physical 1 1 1 Affinity Capture-RNA
ERV29 YGR284C Protein localized to COPII-coated vesicles genetic 1 1 1 Negative Genetic
STM1 YLR150W Protein required for optimal translation under nutrient stress physical 1 1 1 Affinity Capture-MS
DID2 YKR035W-A Class E protein of the vacuolar protein-sorting (Vps) pathway genetic 1 1 1 Positive Genetic
PAN3 YKL025C Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex genetic 1 1 1 Negative Genetic
ERF2 YLR246W Subunit of a palmitoyltransferase physical 1 1 1 Affinity Capture-RNA
ATM1 YMR301C Mitochondrial inner membrane ATP-binding cassette (ABC) transporter genetic 1 1 1 Negative Genetic
SSB2 YNL209W Cytoplasmic ATPase that is a ribosome-associated molecular chaperone physical 1 1 1 Co-purification
SOH1 YGL127C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
COX19 YLL018C-A Protein required for cytochrome c oxidase assembly physical 1 1 1 Affinity Capture-RNA
INN1 YNL152W Essential protein that associates with contractile actomyosin ring genetic 1 1 1 Negative Genetic
RPL13A YDL082W Ribosomal 60S subunit protein L13A genetic 1 1 1 Negative Genetic
TAO3 YIL129C Component of the RAM signaling network genetic 1 1 1 Negative Genetic
MLS1 YNL117W Malate synthase, enzyme of the glyoxylate cycle physical 1 1 1 Affinity Capture-RNA
IXR1 YKL032C Transcriptional repressor that regulates hypoxic genes during normoxia genetic 1 1 1 Negative Genetic
RPL15A YLR029C Ribosomal 60S subunit protein L15A genetic 1 1 1 Negative Genetic
PGU1 YJR153W Endo-polygalacturonase genetic 1 1 1 Negative Genetic
BOP3 YNL042W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MIT1 YEL007W Transcriptional regulator of pseudohyphal growth genetic 1 1 1 Negative Genetic
MDM1 YML104C PtdIns-3-P binding protein that tethers the ER to vacuoles at NVJs genetic 1 1 1 Negative Genetic
PBN1 YCL052C Component of glycosylphosphatidylinositol-mannosyltransferase I genetic 1 1 1 Positive Genetic
POG1 YIL122W DNA-binding transcriptional activator physical 1 1 1 Affinity Capture-RNA
ADE1 YAR015W N-succinyl-5-aminoimidazole-4-carboxamide ribotide synthetase physical 1 1 1 Affinity Capture-RNA
HCM1 YCR065W Forkhead transcription factor physical 1 1 1 Affinity Capture-RNA
HLR1 YDR528W Protein involved in regulation of cell wall composition and integrity physical 1 1 1 Affinity Capture-RNA
CSF1 YLR087C Protein with structural similarity to lipid transport protein Vps13p physical 1 1 1 Affinity Capture-RNA
COX15 YER141W Heme a synthase physical 1 1 1 Affinity Capture-RNA
ORC6 YHR118C Subunit of the origin recognition complex (ORC) genetic 1 1 1 Negative Genetic
PSG1 YKL077W Protein that promotes the transport and maturation of Pma1 with Exp1 genetic 1 1 1 Negative Genetic
RMI1 YPL024W Subunit of the RecQ (Sgs1p) - Topo III (Top3p) complex genetic 1 1 1 Negative Genetic
VMA21 YGR105W Integral membrane protein required for V-ATPase function genetic 1 1 1 Synthetic Growth Defect
AGP2 YBR132C Plasma membrane regulator of polyamine and carnitine transport genetic 1 1 1 Negative Genetic
ESBP6 YNL125C Protein with similarity to monocarboxylate permeases physical 1 1 1 Affinity Capture-RNA
MXR1 YER042W Methionine-S-sulfoxide reductase genetic 1 1 1 Negative Genetic
PSY3 YLR376C Component of Shu complex (aka PCSS complex) physical 1 1 1 Affinity Capture-RNA
TIP1 YBR067C Major cell wall mannoprotein with possible lipase activity physical 1 1 1 Affinity Capture-RNA
HRQ1 YDR291W 3'-5' DNA helicase of the conserved RecQ family genetic 1 1 1 Negative Genetic
PHR1 YOR386W DNA photolyase involved in photoreactivation physical 1 1 1 Affinity Capture-RNA
BPL1 YDL141W Biotin:apoprotein ligase physical 1 1 1 Affinity Capture-RNA
DSE4 YNR067C Daughter cell-specific secreted protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
SCC4 YER147C Subunit of cohesin loading factor (Scc2p-Scc4p) physical 1 1 1 Affinity Capture-RNA
GLG1 YKR058W Glycogenin glucosyltransferase physical 1 1 1 Affinity Capture-RNA
MET12 YPL023C Protein with MTHFR activity in vitro genetic 1 1 1 Negative Genetic
LCB5 YLR260W Minor sphingoid long-chain base kinase physical 1 1 1 Affinity Capture-RNA
PMR1 YGL167C High affinity Ca2+/Mn2+ P-type ATPase genetic 1 1 1 Negative Genetic
NEL1 YHR035W Activator of Sar1p GTPase activity physical 1 1 1 Affinity Capture-RNA
HOB2 YPR117W Protein with structural similarity to lipid transport protein Vps13p physical 1 1 1 Affinity Capture-RNA
SAS10 YDL153C Subunit of U3-containing Small Subunit (SSU) processome complex genetic 1 1 1 Negative Genetic
VHS2 YIL135C Regulator of septin dynamics physical 1 1 1 Affinity Capture-RNA
GCD14 YJL125C Subunit of tRNA (1-methyladenosine) methyltransferase genetic 1 1 1 Negative Genetic
FTR1 YER145C High affinity iron permease physical 1 1 1 Affinity Capture-RNA
OLE1 YGL055W Delta(9) fatty acid desaturase physical 1 1 1 Affinity Capture-RNA
URB2 YJR041C Protein required for normal metabolism of the rRNA primary transcript genetic 1 1 1 Negative Genetic
RRT5 YFR032C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RAD27 YKL113C 5' to 3' exonuclease, 5' flap endonuclease genetic 1 1 1 Negative Genetic
CBS1 YDL069C Mitochondrial translational activator of the COB mRNA physical 1 1 1 Affinity Capture-RNA
SAC1 YKL212W Phosphatidylinositol phosphate phosphatase physical 1 1 1 Affinity Capture-RNA
RIA1 YNL163C Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis genetic 1 1 1 Negative Genetic
TBF1 YPL128C Telobox-containing general regulatory factor physical 1 1 1 Affinity Capture-RNA
NAM2 YLR382C Mitochondrial leucyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
CAJ1 YER048C Nuclear type II J heat shock protein of the E. coli dnaJ family genetic 1 1 1 Positive Genetic
MDM36 YPR083W Mitochondrial protein physical 1 1 1 Affinity Capture-RNA
ROT1 YMR200W Molecular chaperone involved in protein folding in ER physical 1 1 1 Affinity Capture-RNA
FLO11 YIR019C GPI-anchored cell surface glycoprotein (flocculin) physical 1 1 1 Affinity Capture-RNA
RIM21 YNL294C pH sensor molecule, component of the RIM101 pathway genetic 1 1 1 Negative Genetic
ISM1 YPL040C Mitochondrial isoleucyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
RDS2 YPL133C Transcription factor involved in regulating gluconeogenesis physical 1 1 1 Affinity Capture-RNA
JID1 YPR061C Probable Hsp40p co-chaperone physical 1 1 1 Affinity Capture-RNA
AIM23 YJL131C Mitochondrial translation initiation factor 3 (IF3, mIF3) genetic 1 1 1 Positive Genetic
BSC2 YDR275W Protein of unknown function involved in multidrug resistance physical 1 1 1 Affinity Capture-RNA
MUB1 YMR100W MYND domain-containing protein physical 1 1 1 Affinity Capture-RNA
RIM4 YHL024W Putative RNA-binding protein physical 1 1 1 Affinity Capture-RNA
COA3 YJL062W-A Mitochondrial protein required for cytochrome c oxidase assembly genetic 1 1 1 Negative Genetic
RPS9A YPL081W Protein component of the small (40S) ribosomal subunit genetic 1 1 1 Negative Genetic
RPL20A YMR242C Ribosomal 60S subunit protein L20A genetic 1 1 1 Negative Genetic
SEH1 YGL100W Subunit of the Nup84 nuclear pore and SEACAT subcomplexes genetic 1 1 1 Negative Genetic
RPS16A YMR143W Protein component of the small (40S) ribosomal subunit genetic 1 1 1 Negative Genetic
RPL8B YLL045C Ribosomal 60S subunit protein L8A genetic 1 1 1 Negative Genetic
RPL17B YJL177W Ribosomal 60S subunit protein L17B genetic 1 1 1 Positive Genetic
GSH1 YJL101C Gamma glutamylcysteine synthetase genetic 1 1 1 Negative Genetic
RPL6B YLR448W Ribosomal 60S subunit protein L6B genetic 1 1 1 Negative Genetic
RFS1 YBR052C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
IGD1 YFR017C Cytoplasmic protein that inhibits Gdb1p glycogen debranching activity physical 1 1 1 Affinity Capture-RNA
HEM1 YDR232W 5-aminolevulinate synthase genetic 1 1 1 Negative Genetic
HUT1 YPL244C Protein with a role in UDP-galactose transport to the Golgi lumen physical 1 1 1 Affinity Capture-RNA
IRC5 YFR038W Putative ATPase containing the DEAD/H helicase-related sequence motif physical 1 1 1 Affinity Capture-RNA
DIF1 YLR437C Protein that regulates nuclear import of Rnr2p and Rnr4p physical 1 1 1 Affinity Capture-RNA
IRC23 YOR044W Protein of unknown function involved in multidrug resistance physical 1 1 1 Affinity Capture-RNA
RDR1 YOR380W Transcriptional repressor involved in regulating multidrug resistance physical 1 1 1 Affinity Capture-RNA
GAS3 YMR215W Putative 1,3-beta-glucanosyltransferase physical 1 1 1 Affinity Capture-RNA
PMT6 YGR199W Protein O-mannosyltransferase physical 1 1 1 Affinity Capture-RNA
PUF2 YPR042C PUF family mRNA-binding protein physical 1 1 1 Affinity Capture-RNA
HUR1 YGL168W Protein with a role in DNA repair genetic 1 1 1 Negative Genetic
SIT1 YEL065W Ferrioxamine B transporter physical 1 1 1 Affinity Capture-RNA
ERG24 YNL280C C-14 sterol reductase genetic 1 1 1 Negative Genetic
TDA3 YHR009C Putative oxidoreductase involved in late endosome to Golgi transport physical 1 1 1 Two-hybrid
TRP1 YDR007W Phosphoribosylanthranilate isomerase genetic 1 1 1 Negative Genetic
CYC1 YJR048W Cytochrome c, isoform 1 genetic 1 1 1 Negative Genetic
COX10 YPL172C Heme A:farnesyltransferase physical 1 1 1 Affinity Capture-RNA
RPL14A YKL006W Ribosomal 60S subunit protein L14A genetic 1 1 1 Negative Genetic
GSC2 YGR032W Catalytic subunit of 1,3-beta-glucan synthase physical 1 1 1 Affinity Capture-RNA
RPL2B YIL018W Ribosomal 60S subunit protein L2B genetic 1 1 1 Negative Genetic
GIS1 YDR096W Histone demethylase and transcription factor physical 1 1 1 Affinity Capture-MS
SPO14 YKR031C Phospholipase D physical 1 1 1 Affinity Capture-RNA
SPO14 YKR031C Phospholipase D genetic 1 1 1 Negative Genetic
GUD1 YDL238C Guanine deaminase physical 1 1 1 Affinity Capture-RNA
COQ2 YNR041C Para hydroxybenzoate polyprenyl transferase physical 1 1 1 Affinity Capture-RNA
ASI2 YNL159C Subunit of the inner nuclear membrane Asi ubiquitin ligase complex genetic 1 1 1 Negative Genetic
EEB1 YPL095C Acyl-coenzymeA:ethanol O-acyltransferase physical 1 1 1 Affinity Capture-RNA
MDM34 YGL219C Mitochondrial component of the ERMES complex genetic 1 1 1 Negative Genetic
PCS60 YBR222C Oxalyl-CoA synthetase physical 1 1 1 Affinity Capture-RNA
HXT3 YDR345C Low affinity glucose transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
SUR7 YML052W Plasma membrane protein, component of eisosomes genetic 1 1 1 Negative Genetic
SNQ2 YDR011W Plasma membrane ATP-binding cassette (ABC) transporter genetic 1 1 1 Negative Genetic
SUM1 YDR310C Transcriptional repressor that regulates middle-sporulation genes genetic 1 1 1 Negative Genetic
MSA1 YOR066W Activator of G1-specific transcription factors MBF and SBF physical 1 1 1 Affinity Capture-RNA
ERS1 YCR075C Protein involved in cystine transport physical 1 1 1 Affinity Capture-RNA
COX7 YMR256C Subunit VII of cytochrome c oxidase (Complex IV) genetic 1 1 1 Positive Genetic
TRM13 YOL125W 2'-O-methyltransferase physical 1 1 1 Affinity Capture-RNA
VHT1 YGR065C High-affinity plasma membrane H+-biotin (vitamin H) symporter physical 1 1 1 Affinity Capture-RNA
VHT1 YGR065C High-affinity plasma membrane H+-biotin (vitamin H) symporter genetic 1 1 1 Negative Genetic
VOA1 YGR106C ER protein that functions in assembly of the V0 sector of V-ATPase genetic 1 1 1 Synthetic Growth Defect
TPO2 YGR138C Polyamine transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
RIB7 YBR153W Diaminohydroxyphoshoribosylaminopyrimidine deaminase physical 1 1 1 Affinity Capture-RNA
MLO127 YJR039W Mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
PFA4 YOL003C Palmitoyltransferase with autoacylation activity genetic 1 1 1 Negative Genetic
DUS4 YLR405W Dihydrouridine synthase physical 1 1 1 Affinity Capture-RNA
TRE1 YPL176C Transferrin receptor-like protein physical 1 1 1 Affinity Capture-RNA
ATG41 YPL250C Protein of unknown function genetic 1 1 1 Negative Genetic
FIT1 YDR534C Mannoprotein that is incorporated into the cell wall physical 1 1 1 Affinity Capture-RNA
WHI3 YNL197C RNA binding protein that modulates mRNA stability physical 1 1 1 Protein-RNA
YBR197C YBR197C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YDL211C YDL211C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YGR067C YGR067C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YGR079W YGR079W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
WSC4 YHL028W Endoplasmic reticulum (ER) membrane protein physical 1 1 1 Affinity Capture-RNA
YIL054W YIL054W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YIA6 YIL006W Mitochondrial NAD+ transporter physical 1 1 1 Affinity Capture-RNA
YIA6 YIL006W Mitochondrial NAD+ transporter genetic 1 1 1 Positive Genetic
YIR016W YIR016W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YJL132W YJL132W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YJR012C YJR012C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ZRT3 YKL175W Vacuolar membrane zinc transporter physical 1 1 1 Affinity Capture-RNA
YKR045C YKR045C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YCT1 YLL055W High-affinity cysteine-specific transporter physical 1 1 1 Affinity Capture-RNA
XYL2 YLR070C Xylitol dehydrogenase physical 1 1 1 Affinity Capture-RNA
YLR278C YLR278C Zinc-cluster protein physical 1 1 1 Affinity Capture-RNA
YML100W-A YML100W-A Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YML083C YML083C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YMD8 YML038C Putative nucleotide sugar transporter physical 1 1 1 Affinity Capture-RNA
YIM1 YMR152W Aldehyde reductase physical 1 1 1 Affinity Capture-RNA
YPT11 YNL304W Rab GTPase physical 1 1 1 Affinity Capture-RNA
YNL143C YNL143C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YOL057W YOL057W Dipeptidyl-peptidase III physical 1 1 1 Affinity Capture-RNA
WHI2 YOR043W Negative regulator of TORC1 in response to limiting leucine physical 1 1 1 Affinity Capture-RNA
YOR186W YOR186W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
VTS1 YOR359W Flap-structured DNA-binding and RNA-binding protein physical 1 1 1 Affinity Capture-RNA
YPL264C YPL264C Endoplasmic reticulum protein of unknown function physical 1 1 1 Affinity Capture-RNA
YPL245W YPL245W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YPR084W YPR084W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YOR1 YGR281W Plasma membrane ATP-binding cassette (ABC) transporter genetic 1 1 1 Positive Genetic
YBL036C YBL036C Putative non-specific single-domain racemase genetic 1 1 1 Negative Genetic
YMC2 YBR104W Putative mitochondrial inner membrane transporter genetic 1 1 1 Negative Genetic
YBR225W YBR225W Putative protein of unknown function genetic 1 1 1 Negative Genetic
YGL039W YGL039W Aldehyde reductase genetic 1 1 1 Negative Genetic
YPT6 YLR262C Rab family GTPase genetic 1 1 1 Negative Genetic
OPI3 YJR073C Methylene-fatty-acyl-phospholipid synthase genetic 1 1 1 Negative Genetic
PEX8 YGR077C Intraperoxisomal organizer of the peroxisomal import machinery physical 1 1 1 Affinity Capture-RNA
VNX1 YNL321W Calcium/H+ antiporter localized to the endoplasmic reticulum membrane physical 1 1 1 Affinity Capture-RNA
KHA1 YJL094C Putative K+/H+ antiporter physical 1 1 1 Affinity Capture-RNA
ATH1 YPR026W Acid trehalase required for utilization of extracellular trehalose physical 1 1 1 Affinity Capture-RNA
NCS6 YGL211W Protein required for uridine thiolation of Gln, Lys, and Glu tRNAs genetic 1 1 1 Negative Genetic
RPS6B YBR181C Protein component of the small (40S) ribosomal subunit genetic 1 1 1 Negative Genetic
DNF3 YMR162C Trans-golgi network aminophospholipid translocase (flippase) physical 1 1 1 Affinity Capture-RNA
LDO45 YMR147W Putative protein of unknown function genetic 1 1 1 Negative Genetic
MIC12 YBR262C Component of the MICOS complex genetic 1 1 1 Negative Genetic
GLC3 YEL011W Glycogen branching enzyme, involved in glycogen accumulation physical 1 1 1 Affinity Capture-RNA
MTE1 YGR042W Protein of unknown function genetic 1 1 1 Negative Genetic
CRD1 YDL142C Cardiolipin synthase genetic 1 1 1 Positive Genetic
MDL2 YPL270W Mitochondrial inner membrane half-type ABC transporter genetic 1 1 1 Negative Genetic
MCH4 YOL119C Protein with similarity to mammalian monocarboxylate permeases genetic 1 1 1 Negative Genetic
MCO6 YJL127C-B Mitochondrial protein of unknown function genetic 1 1 1 Negative Genetic
COX16 YJL003W Mitochondrial inner membrane protein physical 1 1 1 Affinity Capture-RNA
LDS2 YOL047C Protein Involved in spore wall assembly physical 1 1 1 Affinity Capture-RNA
COS9 YKL219W Endosomal protein involved in turnover of plasma membrane proteins physical 1 1 1 Affinity Capture-RNA
AVT7 YIL088C Vacuolar amino acid transporter genetic 1 1 1 Negative Genetic
VPS8 YAL002W Membrane-binding component of the CORVET complex physical 1 1 1 Affinity Capture-RNA
VPS8 YAL002W Membrane-binding component of the CORVET complex genetic 1 1 1 Negative Genetic
GUP2 YPL189W Probable membrane protein physical 1 1 1 Affinity Capture-RNA
PMT7 YDR307W Putative protein mannosyltransferase similar to Pmt1p genetic 1 1 1 Negative Genetic
SMF2 YHR050W Divalent metal ion transporter involved in manganese homeostasis physical 1 1 1 Affinity Capture-RNA
PIG2 YIL045W Putative type-1 protein phosphatase targeting subunit physical 1 1 1 Affinity Capture-RNA
ROM1 YGR070W Guanine nucleotide exchange factor (GEF) for Rho1p physical 1 1 1 Affinity Capture-RNA
PIF1 YML061C DNA helicase, potent G-quadruplex DNA binder/unwinder physical 1 1 1 Affinity Capture-RNA
LEU2 YCL018W Beta-isopropylmalate dehydrogenase (IMDH) physical 1 1 1 Affinity Capture-RNA
FSH1 YHR049W Lysophospholipase physical 1 1 1 Affinity Capture-RNA
PTH1 YHR189W One of two mitochondrially-localized peptidyl-tRNA hydrolases genetic 1 1 1 Negative Genetic
PET54 YGR222W Mitochondrial inner membrane protein physical 1 1 1 Affinity Capture-RNA
BMT6 YLR063W Methyltransferase required for m3U2843 methylation of the 25S rRNA genetic 1 1 1 Negative Genetic
SNG1 YGR197C Protein involved in resistance to nitrosoguanidine and 6-azauracil genetic 1 1 1 Negative Genetic
PUT1 YLR142W Proline oxidase physical 1 1 1 Affinity Capture-RNA
HMS2 YJR147W Protein with similarity to heat shock transcription factors genetic 1 1 1 Negative Genetic
RSM28 YDR494W Mitochondrial ribosomal protein of the small subunit genetic 1 1 1 Negative Genetic
CWP1 YKL096W Cell wall mannoprotein that localizes to birth scars of daughter cells physical 1 1 1 Affinity Capture-RNA
UBR2 YLR024C Cytoplasmic ubiquitin-protein ligase (E3) physical 1 1 1 Affinity Capture-RNA
LRE1 YCL051W Protein involved in control of cell wall structure and stress response physical 1 1 1 Affinity Capture-RNA
PDE2 YOR360C High-affinity cyclic AMP phosphodiesterase physical 1 1 1 Affinity Capture-RNA
MCH5 YOR306C Plasma membrane riboflavin transporter physical 1 1 1 Affinity Capture-RNA
SPO71 YDR104C Meiosis-specific protein required for prospore membrane morphogenesis physical 1 1 1 Affinity Capture-RNA
SIM1 YIL123W Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p) physical 1 1 1 Affinity Capture-RNA
QRI7 YDL104C Protein involved in threonylcarbamoyl adenosine biosynthesis genetic 1 1 1 Negative Genetic
PHM6 YDR281C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RBH1 YJL181W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RSF2 YJR127C Zinc-finger protein physical 1 1 1 Affinity Capture-RNA
PRY3 YJL078C GPI-anchored cell wall protein involved in export of sterols genetic 1 1 1 Negative Genetic
TVP38 YKR088C Integral membrane protein genetic 1 1 1 Negative Genetic
TAM41 YGR046W Mitochondrial phosphatidate cytidylyltransferase (CDP-DAG synthase) physical 1 1 1 Affinity Capture-RNA
MRX4 YPL168W Protein that associates with mitochondrial ribosome physical 1 1 1 Affinity Capture-RNA
RSO55 YLR281C Mitochondrial protein of unknown function genetic 1 1 1 Negative Genetic
TSC10 YBR265W 3-ketosphinganine reductase physical 1 1 1 Affinity Capture-RNA
NPP1 YCR026C Nucleotide pyrophosphatase/phosphodiesterase physical 1 1 1 Affinity Capture-RNA
FMT1 YBL013W Methionyl-tRNA formyltransferase physical 1 1 1 Affinity Capture-RNA
SYT1 YPR095C Guanine nucleotide exchange factor (GEF) for Arf proteins physical 1 1 1 Affinity Capture-RNA
UGA3 YDL170W Transcriptional activator for GABA-dependent induction of GABA genes physical 1 1 1 Affinity Capture-RNA
SRF1 YDL133W Regulator of phospholipase D (Spo14p) physical 1 1 1 Affinity Capture-RNA
SPS2 YDR522C Protein expressed during sporulation physical 1 1 1 Affinity Capture-RNA
STL1 YDR536W Glycerol proton symporter of the plasma membrane physical 1 1 1 Affinity Capture-RNA
SPO73 YER046W Meiosis-specific protein required for prospore membrane morphogenesis physical 1 1 1 Affinity Capture-RNA
TRK1 YJL129C Component of the Trk1p-Trk2p potassium transport system physical 1 1 1 Affinity Capture-RNA
DAN1 YJR150C Cell wall mannoprotein physical 1 1 1 Affinity Capture-RNA
TRE2 YOR256C Transferrin receptor-like protein physical 1 1 1 Affinity Capture-RNA
MAY24 YPR153W Peripheral ER membrane protein physical 1 1 1 Affinity Capture-RNA
TOM6 YOR045W Component of the TOM (translocase of outer membrane) complex genetic 1 1 1 Negative Genetic
PES4 YFR023W Poly(A) binding protein, suppressor of DNA polymerase epsilon mutation genetic 1 1 1 Negative Genetic
VAM10 YOR068C Protein involved in vacuole morphogenesis genetic 1 1 1 Negative Genetic
SMA2 YML066C Meiosis-specific prospore membrane protein genetic 1 1 1 Positive Genetic
UPS1 YLR193C Phosphatidic acid transfer protein genetic 1 1 1 Negative Genetic
TTI2 YJR136C Subunit of the ASTRA complex, involved in chromatin remodeling genetic 1 1 1 Positive Genetic