| CLN3 |
YAL040C |
G1 cyclin involved in cell cycle progression |
physical |
4 |
3 |
4 |
Affinity Capture-Western, Protein-RNA, Affinity Capture-RNA, Affinity Capture-RNA |
| WHI4 |
YDL224C |
Putative RNA binding protein |
genetic |
4 |
2 |
4 |
Phenotypic Enhancement, Negative Genetic, Negative Genetic, Negative Genetic |
| CLN3 |
YAL040C |
G1 cyclin involved in cell cycle progression |
genetic |
3 |
3 |
3 |
Phenotypic Enhancement, Phenotypic Suppression, Synthetic Rescue |
| DHH1 |
YDL160C |
Cytoplasmic DEAD-box helicase and mRNA decapping activator |
physical |
3 |
2 |
3 |
Protein-RNA, Affinity Capture-RNA, Affinity Capture-RNA |
| MPT5 |
YGL178W |
mRNA-binding protein of the PUF family |
physical |
3 |
2 |
3 |
Protein-RNA, Affinity Capture-RNA, Affinity Capture-RNA |
| RPN4 |
YDL020C |
Transcription factor that stimulates expression of proteasome genes |
genetic |
3 |
2 |
3 |
Negative Genetic, Synthetic Growth Defect, Negative Genetic |
| LRP1 |
YHR081W |
Nuclear exosome-associated nucleic acid binding protein |
genetic |
3 |
1 |
3 |
Negative Genetic, Negative Genetic, Negative Genetic |
| EAF3 |
YPR023C |
Component of the Rpd3S histone deacetylase complex |
genetic |
3 |
1 |
3 |
Negative Genetic, Negative Genetic, Negative Genetic |
| MED1 |
YPR070W |
Subunit of the RNA polymerase II mediator complex |
genetic |
3 |
1 |
3 |
Negative Genetic, Negative Genetic, Negative Genetic |
| ERG3 |
YLR056W |
C-5 sterol desaturase |
genetic |
3 |
1 |
3 |
Negative Genetic, Negative Genetic, Negative Genetic |
| DED1 |
YOR204W |
ATP-dependent DEAD-box RNA helicase with strand-annealing activity |
physical |
2 |
2 |
2 |
Affinity Capture-Western, PCA |
| KAP95 |
YLR347C |
Karyopherin beta |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| AVO1 |
YOL078W |
Component of the membrane-bound TORC2 complex |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| CDC6 |
YJL194W |
Essential ATP-binding protein required for DNA replication |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| SIP1 |
YDR422C |
One of three alternate beta-subunits of the Snf1p kinase complex |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| ACE2 |
YLR131C |
Transcription factor required for septum destruction after cytokinesis |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| FUN19 |
YAL034C |
Non-essential protein of unknown function |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| GPA2 |
YER020W |
Nucleotide binding alpha subunit of the heterotrimeric G protein |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| KSP1 |
YHR082C |
Serine/threonine protein kinase |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| ISU1 |
YPL135W |
Conserved protein of the mitochondrial matrix |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| CLN2 |
YPL256C |
G1 cyclin involved in regulation of the cell cycle |
physical |
2 |
2 |
2 |
Affinity Capture-Western, Protein-RNA |
| FUI1 |
YBL042C |
High affinity uridine permease, localizes to the plasma membrane |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| PCL2 |
YDL127W |
Cyclin, interacts with cyclin-dependent kinase Pho85p |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| RRN6 |
YBL014C |
Component of the core factor (CF) rDNA transcription factor complex |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| HOS3 |
YPL116W |
Trichostatin A-insensitive homodimeric histone deacetylase (HDAC) |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| SWI6 |
YLR182W |
Transcription cofactor |
genetic |
2 |
2 |
2 |
Positive Genetic, Synthetic Rescue |
| CLB5 |
YPR120C |
B-type cyclin involved in DNA replication during S phase |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| RPA14 |
YDR156W |
RNA polymerase I subunit A14 |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| KTI11 |
YBL071W-A |
Zn-ribbon protein that co-purifies with Dph1 and Dph2 |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| RRN11 |
YML043C |
Component of the core factor (CF) rDNA transcription factor complex |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| RRN7 |
YJL025W |
Component of the core factor (CF) rDNA transcription factor complex |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| AFI1 |
YOR129C |
Arf3p polarization-specific docking factor |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| HCH1 |
YNL281W |
Heat shock protein regulator |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| RLM1 |
YPL089C |
MADS-box transcription factor |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| ERT1 |
YBR239C |
Transcriptional regulator |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| SOH1 |
YGL127C |
Subunit of the RNA polymerase II mediator complex |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| FUR1 |
YHR128W |
Uracil phosphoribosyltransferase |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| BTS1 |
YPL069C |
Geranylgeranyl diphosphate synthase (GGPPS) |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| FRK1 |
YPL141C |
Protein kinase of unknown cellular role |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| EGT2 |
YNL327W |
Glycosylphosphatidylinositol (GPI)-anchored cell wall endoglucanase |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| MSC2 |
YDR205W |
Endoplasmic reticulum zinc transporter |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| MIG2 |
YGL209W |
Zinc finger transcriptional repressor |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| PAH1 |
YMR165C |
Mg2+-dependent phosphatidate (PA) phosphatase |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| MDJ2 |
YNL328C |
Constituent of the mitochondrial import motor |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| VHR2 |
YER064C |
Non-essential nuclear protein |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| VID24 |
YBR105C |
GID Complex regulatory subunit |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| CYK3 |
YDL117W |
SH3-domain protein located in the bud neck and cytokinetic actin ring |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| TMC1 |
YOR052C |
AN1-type zinc finger protein, effector of proteotoxic stress response |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| IPT1 |
YDR072C |
Inositolphosphotransferase |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| SIT1 |
YEL065W |
Ferrioxamine B transporter |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| ECL1 |
YGR146C |
Protein of unknown function |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| TPO1 |
YLL028W |
Polyamine transporter of the major facilitator superfamily |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| HXT1 |
YHR094C |
Low-affinity glucose transporter of the major facilitator superfamily |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| LYP1 |
YNL268W |
Lysine permease |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| MOT3 |
YMR070W |
Transcriptional repressor, activator |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| WHI3 |
YNL197C |
RNA binding protein that modulates mRNA stability |
physical |
2 |
2 |
2 |
PCA, Affinity Capture-RNA |
| YDR249C |
YDR249C |
Putative protein of unknown function |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| YJR115W |
YJR115W |
Putative protein of unknown function |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| YNR014W |
YNR014W |
Putative protein of unknown function |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| YGK3 |
YOL128C |
Protein kinase related to mammalian GSK-3 glycogen synthase kinases |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| YGR035C |
YGR035C |
Putative protein of unknown function, potential Cdc28p substrate |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| YIA6 |
YIL006W |
Mitochondrial NAD+ transporter |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| YHL008C |
YHL008C |
Putative protein of unknown function |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| ZAP1 |
YJL056C |
Zinc-regulated transcription factor |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| YKR075C |
YKR075C |
Protein of unknown function |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| YJR056C |
YJR056C |
Protein of unknown function |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| YOL036W |
YOL036W |
Protein of unknown function |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| YRM1 |
YOR172W |
Zinc finger transcription factor involved in multidrug resistance |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| MRS4 |
YKR052C |
Iron transporter of the mitochondrial carrier family |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| NCW1 |
YMR122W-A |
Protein of unknown function |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| AVT5 |
YBL089W |
Putative transporter |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| RMD8 |
YFR048W |
Cytosolic protein required for sporulation |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| SMF3 |
YLR034C |
Putative divalent metal ion transporter involved in iron homeostasis |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| NDD1 |
YOR372C |
Transcriptional activator essential for nuclear division |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| STE24 |
YJR117W |
Highly conserved zinc metalloprotease |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| GIS3 |
YLR094C |
Protein of unknown function |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| PUN1 |
YLR414C |
Plasma membrane protein with a role in cell wall integrity |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| MET13 |
YGL125W |
Major isozyme of methylenetetrahydrofolate reductase |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| SCW11 |
YGL028C |
Cell wall protein with similarity to glucanases |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| MUP3 |
YHL036W |
Low affinity methionine permease |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| UBP5 |
YER144C |
Putative ubiquitin-specific protease |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| PRM7 |
YDL039C |
Pheromone-regulated protein |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
| LEO1 |
YOR123C |
Component of the Paf1 complex |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| SRB2 |
YHR041C |
Subunit of the RNA polymerase II mediator complex |
genetic |
2 |
1 |
2 |
Positive Genetic, Positive Genetic |
| NOP12 |
YOL041C |
Nucleolar protein involved in pre-25S rRNA processing |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| REI1 |
YBR267W |
Cytoplasmic pre-60S factor |
genetic |
2 |
1 |
2 |
Positive Genetic, Positive Genetic |
| SSD1 |
YDR293C |
Translational repressor |
physical |
2 |
1 |
2 |
Affinity Capture-RNA, Affinity Capture-RNA |
| ASC1 |
YMR116C |
G-protein beta subunit and guanine dissociation inhibitor for Gpa2p |
genetic |
2 |
1 |
2 |
Positive Genetic, Positive Genetic |
| HTA1 |
YDR225W |
Histone H2A |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| DEP1 |
YAL013W |
Component of the Rpd3L histone deacetylase complex |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| SDS3 |
YIL084C |
Component of the Rpd3L histone deacetylase complex |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| RXT2 |
YBR095C |
Component of the histone deacetylase Rpd3L complex |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| PUF3 |
YLL013C |
Protein of the mitochondrial outer surface |
physical |
2 |
1 |
2 |
Affinity Capture-RNA, Affinity Capture-RNA |
| ADR1 |
YDR216W |
Carbon source-responsive zinc-finger transcription factor |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| SLX5 |
YDL013W |
Subunit of the Slx5-Slx8 SUMO-targeted Ub ligase (STUbL) complex |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| FAA1 |
YOR317W |
Long chain fatty acyl-CoA synthetase |
genetic |
2 |
1 |
2 |
Positive Genetic, Positive Genetic |
| KSS1 |
YGR040W |
Mitogen-activated protein kinase (MAPK) |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| NDE1 |
YMR145C |
Mitochondrial external NADH dehydrogenase |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| BUB3 |
YOR026W |
Kinetochore checkpoint WD40 repeat protein |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| FAR3 |
YMR052W |
Protein of unknown function |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| GDS1 |
YOR355W |
Protein involved in histone H4 acetylation at ribosomal protein genes |
genetic |
2 |
1 |
2 |
Positive Genetic, Positive Genetic |
| PIR5 |
YJL160C |
Putative protein of unknown function |
genetic |
2 |
1 |
2 |
Positive Genetic, Positive Genetic |
| BRE5 |
YNR051C |
Ubiquitin protease cofactor |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| VPS71 |
YML041C |
Nucleosome-binding component of the SWR1 complex |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| SIP4 |
YJL089W |
C6 zinc cluster transcriptional activator |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| MET28 |
YIR017C |
bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex |
genetic |
2 |
1 |
2 |
Positive Genetic, Positive Genetic |
| ERV29 |
YGR284C |
Protein localized to COPII-coated vesicles |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| HOC1 |
YJR075W |
Alpha-1,6-mannosyltransferase |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| MOG1 |
YJR074W |
Conserved nuclear protein that interacts with GTP-Gsp1p |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| RPL13A |
YDL082W |
Ribosomal 60S subunit protein L13A |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| RPL29 |
YFR032C-A |
Ribosomal 60S subunit protein L29 |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| SAC7 |
YDR389W |
GTPase activating protein (GAP) for Rho1p |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| VMA21 |
YGR105W |
Integral membrane protein required for V-ATPase function |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| UBP3 |
YER151C |
Ubiquitin-specific protease that cleaves Ub-protein fusions |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| KIN4 |
YOR233W |
Serine/threonine protein kinase |
genetic |
2 |
1 |
2 |
Positive Genetic, Positive Genetic |
| ATG21 |
YPL100W |
Phosphoinositide binding protein |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| DEG1 |
YFL001W |
tRNA:pseudouridine synthase |
genetic |
2 |
1 |
2 |
Positive Genetic, Positive Genetic |
| MEP3 |
YPR138C |
Ammonium permease of high capacity and low affinity |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| CGR1 |
YGL029W |
Protein involved in nucleolar integrity and processing of pre-rRNA |
genetic |
2 |
1 |
2 |
Positive Genetic, Positive Genetic |
| YOL036W |
YOL036W |
Protein of unknown function |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| YBR238C |
YBR238C |
Mitochondrial membrane protein |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| YDR248C |
YDR248C |
Putative gluconokinase |
genetic |
2 |
1 |
2 |
Positive Genetic, Positive Genetic |
| RPL21B |
YPL079W |
Ribosomal 60S subunit protein L21B |
genetic |
2 |
1 |
2 |
Positive Genetic, Positive Genetic |
| SMF2 |
YHR050W |
Divalent metal ion transporter involved in manganese homeostasis |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| VPS9 |
YML097C |
Guanine nucleotide exchange factor (GEF) and ubiquitin receptor |
genetic |
2 |
1 |
2 |
Positive Genetic, Positive Genetic |
| UBR2 |
YLR024C |
Cytoplasmic ubiquitin-protein ligase (E3) |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| RTC6 |
YPL183W-A |
Protein involved in translation |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| SLH1 |
YGR271W |
Subunit of ribosome-associated quality control trigger complex (RQT) |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
| ARP2 |
YDL029W |
Essential component of the Arp2/3 complex |
genetic |
2 |
2 |
1 |
Synthetic Rescue, Synthetic Lethality |
| HOG1 |
YLR113W |
Mitogen-activated protein kinase involved in osmoregulation |
genetic |
2 |
2 |
1 |
Synthetic Rescue, Phenotypic Suppression |
| FKH1 |
YIL131C |
Forkhead family transcription factor |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RFX1 |
YLR176C |
Major transcriptional repressor of DNA-damage-regulated genes |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YAP6 |
YDR259C |
Basic leucine zipper (bZIP) transcription factor |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| DSN1 |
YIR010W |
Essential component of the outer kinetochore MIND complex |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| RPO21 |
YDL140C |
RNA polymerase II largest subunit B220 |
physical |
1 |
1 |
1 |
Protein-RNA |
| CKB1 |
YGL019W |
Beta regulatory subunit of casein kinase 2 (CK2) |
genetic |
1 |
1 |
1 |
Negative Genetic |
| IKI3 |
YLR384C |
Subunit of Elongator complex |
genetic |
1 |
1 |
1 |
Negative Genetic |
| RVB1 |
YDR190C |
ATP-dependent DNA helicase, also known as pontin |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| RVB2 |
YPL235W |
ATP-dependent DNA helicase, also known as reptin |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| EAF5 |
YEL018W |
Non-essential subunit of the NuA4 acetyltransferase complex |
physical |
1 |
1 |
1 |
Protein-RNA |
| PLB1 |
YMR008C |
Phospholipase B (lysophospholipase) involved in lipid metabolism |
physical |
1 |
1 |
1 |
Protein-RNA |
| KAP123 |
YER110C |
Karyopherin beta |
genetic |
1 |
1 |
1 |
Positive Genetic |
| FRT2 |
YAL028W |
Tail-anchored ER membrane protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| PUS7 |
YOR243C |
Pseudouridine synthase |
genetic |
1 |
1 |
1 |
Negative Genetic |
| TIF4631 |
YGR162W |
Translation initiation factor eIF4G and scaffold protein |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| TIF4631 |
YGR162W |
Translation initiation factor eIF4G and scaffold protein |
genetic |
1 |
1 |
1 |
Negative Genetic |
| RRP42 |
YDL111C |
Exosome non-catalytic core component |
physical |
1 |
1 |
1 |
Protein-RNA |
| RRP6 |
YOR001W |
Nuclear exosome exonuclease component |
genetic |
1 |
1 |
1 |
Negative Genetic |
| RPA34 |
YJL148W |
RNA polymerase I subunit A34.5 |
genetic |
1 |
1 |
1 |
Negative Genetic |
| PSY2 |
YNL201C |
Subunit of protein phosphatase PP4 complex |
physical |
1 |
1 |
1 |
Protein-RNA |
| HPR1 |
YDR138W |
Subunit of THO/TREX complexes |
genetic |
1 |
1 |
1 |
Positive Genetic |
| RSC2 |
YLR357W |
Component of the RSC chromatin remodeling complex |
genetic |
1 |
1 |
1 |
Positive Genetic |
| GIR2 |
YDR152W |
Highly-acidic RWD domain-containing cytoplasmic protein |
genetic |
1 |
1 |
1 |
Positive Genetic |
| CCR4 |
YAL021C |
Component of the CCR4-NOT transcriptional complex |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| CDC39 |
YCR093W |
Subunit of the CCR4-NOT1 core complex |
physical |
1 |
1 |
1 |
PCA |
| APL3 |
YBL037W |
Alpha-adaptin |
physical |
1 |
1 |
1 |
Protein-RNA |
| BEM1 |
YBR200W |
Protein containing SH3-domains |
genetic |
1 |
1 |
1 |
Positive Genetic |
| BUD14 |
YAR014C |
Protein involved in bud-site selection |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| CAF40 |
YNL288W |
Component of the CCR4-NOT transcriptional complex |
genetic |
1 |
1 |
1 |
Negative Genetic |
| CDC14 |
YFR028C |
Protein phosphatase required for mitotic exit |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| CDC28 |
YBR160W |
Cyclin-dependent kinase (CDK) catalytic subunit |
physical |
1 |
1 |
1 |
Affinity Capture-Western |
| CDC28 |
YBR160W |
Cyclin-dependent kinase (CDK) catalytic subunit |
genetic |
1 |
1 |
1 |
Phenotypic Enhancement |
| CDC55 |
YGL190C |
Regulatory subunit B of protein phosphatase 2A (PP2A) |
physical |
1 |
1 |
1 |
Protein-RNA |
| BUD31 |
YCR063W |
Component of the SF3b subcomplex of the U2 snRNP |
genetic |
1 |
1 |
1 |
Negative Genetic |
| BDF2 |
YDL070W |
Protein involved in transcription initiation |
genetic |
1 |
1 |
1 |
Negative Genetic |
| CRM1 |
YGR218W |
Nuclear export factor, exportin |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| LCB1 |
YMR296C |
Component of serine palmitoyltransferase |
physical |
1 |
1 |
1 |
Protein-RNA |
| MAL12 |
YGR292W |
Maltase (alpha-D-glucosidase) |
genetic |
1 |
1 |
1 |
Positive Genetic |
| CSE2 |
YNR010W |
Subunit of the RNA polymerase II mediator complex |
genetic |
1 |
1 |
1 |
Negative Genetic |
| HSC82 |
YMR186W |
Cytoplasmic chaperone of the Hsp90 family |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| HRR25 |
YPL204W |
Conserved casein kinase, monopolin subunit |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| IMG2 |
YCR071C |
Mitochondrial ribosomal protein of the large subunit |
genetic |
1 |
1 |
1 |
Negative Genetic |
| MUM2 |
YBR057C |
Protein essential for meiotic DNA replication and sporulation |
physical |
1 |
1 |
1 |
Protein-RNA |
| NAM8 |
YHR086W |
RNA binding protein, component of the U1 snRNP protein |
genetic |
1 |
1 |
1 |
Positive Genetic |
| IES5 |
YER092W |
Non-essential INO80 chromatin remodeling complex subunit |
genetic |
1 |
1 |
1 |
Negative Genetic |
| NOT3 |
YIL038C |
Component of the CCR4-NOT core complex, involved in mRNA decapping |
physical |
1 |
1 |
1 |
PCA |
| SWH1 |
YAR042W |
Protein similar to mammalian oxysterol-binding protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| GIM5 |
YML094W |
Subunit of the heterohexameric cochaperone prefoldin complex |
genetic |
1 |
1 |
1 |
Negative Genetic |
| PCF11 |
YDR228C |
mRNA 3' end processing factor |
physical |
1 |
1 |
1 |
Protein-RNA |
| LAT1 |
YNL071W |
Dihydrolipoamide acetyltransferase component (E2) of the PDC |
physical |
1 |
1 |
1 |
Protein-RNA |
| DIG1 |
YPL049C |
MAP kinase-responsive inhibitor of the Ste12p transcription factor |
physical |
1 |
1 |
1 |
Protein-RNA |
| POP2 |
YNR052C |
Subunit of Ccr4-Not complex that mediates 3' to 5' mRNA deadenylation |
physical |
1 |
1 |
1 |
PCA |
| PPH22 |
YDL188C |
Catalytic subunit of protein phosphatase 2A, PP2A |
genetic |
1 |
1 |
1 |
Positive Genetic |
| HSP82 |
YPL240C |
Hsp90 chaperone |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| PRP28 |
YDR243C |
Pre-mRNA splicing factor |
physical |
1 |
1 |
1 |
Protein-RNA |
| MDS3 |
YGL197W |
Putative component of the TOR regulatory pathway |
physical |
1 |
1 |
1 |
Protein-RNA |
| PUB1 |
YNL016W |
Poly (A)+ RNA-binding protein |
physical |
1 |
1 |
1 |
PCA |
| PUB1 |
YNL016W |
Poly (A)+ RNA-binding protein |
genetic |
1 |
1 |
1 |
Negative Genetic |
| RAD52 |
YML032C |
Protein involved in homologous recombination |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| RTS1 |
YOR014W |
B-type regulatory subunit of protein phosphatase 2A (PP2A) |
genetic |
1 |
1 |
1 |
Positive Genetic |
| NUM1 |
YDR150W |
Protein required for nuclear migration |
physical |
1 |
1 |
1 |
Protein-RNA |
| NUP120 |
YKL057C |
Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) |
genetic |
1 |
1 |
1 |
Negative Genetic |
| SEC23 |
YPR181C |
GTPase-activating protein, stimulates the GTPase activity of Sar1p |
physical |
1 |
1 |
1 |
Protein-RNA |
| SAM1 |
YLR180W |
S-adenosylmethionine synthetase |
physical |
1 |
1 |
1 |
Protein-RNA |
| SET2 |
YJL168C |
Histone methyltransferase with a role in transcriptional elongation |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| SIR2 |
YDL042C |
Conserved NAD+ dependent histone deacetylase of the Sirtuin family |
physical |
1 |
1 |
1 |
Protein-RNA |
| SPT15 |
YER148W |
TATA-binding protein (TBP) |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| SRO9 |
YCL037C |
Cytoplasmic RNA-binding protein |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| SBP1 |
YHL034C |
Protein that binds eIF4G and has a role in repression of translation |
genetic |
1 |
1 |
1 |
Negative Genetic |
| NEW1 |
YPL226W |
Translation termination and ribosome biogenesis factor |
genetic |
1 |
1 |
1 |
Positive Genetic |
| TPK2 |
YPL203W |
cAMP-dependent protein kinase catalytic subunit |
physical |
1 |
1 |
1 |
Biochemical Activity |
| DAL3 |
YIR032C |
Ureidoglycolate lyase |
physical |
1 |
1 |
1 |
Protein-RNA |
| VAM6 |
YDL077C |
Guanine nucleotide exchange factor for the GTPase Gtr1p |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| VRP1 |
YLR337C |
Verprolin, proline-rich actin-associated protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| HEK2 |
YBL032W |
RNA binding protein involved in asymmetric localization of ASH1 mRNA |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| TRM112 |
YNR046W |
Protein involved in methylation of tRNA, rRNA, and translation factors |
physical |
1 |
1 |
1 |
Protein-RNA |
| CDC13 |
YDL220C |
Single stranded DNA-binding protein found at TG1-3 telomere G-tails |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
| PHO84 |
YML123C |
High-affinity inorganic phosphate (Pi) transporter |
physical |
1 |
1 |
1 |
Protein-RNA |
| NGL2 |
YMR285C |
Protein involved in 5.8S rRNA processing |
genetic |
1 |
1 |
1 |
Negative Genetic |
| HYP2 |
YEL034W |
Translation elongation factor eIF-5A |
physical |
1 |
1 |
1 |
Protein-RNA |
| TPK1 |
YJL164C |
cAMP-dependent protein kinase catalytic subunit |
physical |
1 |
1 |
1 |
Biochemical Activity |
| PMA1 |
YGL008C |
Plasma membrane P2-type H+-ATPase |
genetic |
1 |
1 |
1 |
Negative Genetic |
| PMA2 |
YPL036W |
Plasma membrane H+-ATPase |
genetic |
1 |
1 |
1 |
Negative Genetic |
| DUN1 |
YDL101C |
Cell-cycle checkpoint S/T protein kinase |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| CAF120 |
YNL278W |
Part of the CCR4-NOT transcriptional regulatory complex |
physical |
1 |
1 |
1 |
Protein-RNA |
| DIP5 |
YPL265W |
Dicarboxylic amino acid permease |
physical |
1 |
1 |
1 |
Protein-RNA |
| HSP104 |
YLL026W |
Disaggregase |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| SOD2 |
YHR008C |
Mitochondrial manganese superoxide dismutase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| SFP1 |
YLR403W |
Regulates transcription of ribosomal protein and biogenesis genes |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| ATG7 |
YHR171W |
Autophagy-related protein and dual specificity member of the E1 family |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| FAR10 |
YLR238W |
Protein involved in recovery from arrest in response to pheromone |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| EST1 |
YLR233C |
TLC1 RNA-associated factor involved in telomere length regulation |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| AFR1 |
YDR085C |
Protein required for pheromone-induced projection (shmoo) formation |
physical |
1 |
1 |
1 |
Protein-RNA |
| SXM1 |
YDR395W |
Nuclear transport factor (karyopherin) |
genetic |
1 |
1 |
1 |
Positive Genetic |
| TEM1 |
YML064C |
GTPase involved in initiation of Mitotic Exit Network (MEN) |
physical |
1 |
1 |
1 |
Protein-RNA |
| INA1 |
YLR413W |
Protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| STE12 |
YHR084W |
Transcription factor that is activated by a MAPK signaling cascade |
genetic |
1 |
1 |
1 |
Phenotypic Suppression |
| HHT1 |
YBR010W |
Histone H3 |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| RAS2 |
YNL098C |
GTP-binding protein |
genetic |
1 |
1 |
1 |
Phenotypic Suppression |
| DPB11 |
YJL090C |
DNA replication initiation protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| SLT2 |
YHR030C |
Serine/threonine MAP kinase |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
| SKG3 |
YLR187W |
Protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| KIC1 |
YHR102W |
Protein kinase of the PAK/Ste20 family, required for cell integrity |
physical |
1 |
1 |
1 |
Protein-RNA |
| BEM4 |
YPL161C |
Protein involved in establishment of cell polarity and bud emergence |
genetic |
1 |
1 |
1 |
Negative Genetic |
| BCK2 |
YER167W |
Serine/threonine-rich protein involved in PKC1 signaling pathway |
genetic |
1 |
1 |
1 |
Synthetic Rescue |
| RAD14 |
YMR201C |
Subunit of Nucleotide Excision Repair Factor 1 (NEF1) |
genetic |
1 |
1 |
1 |
Positive Genetic |
| RGI1 |
YER067W |
Protein involved in energy metabolism under respiratory conditions |
genetic |
1 |
1 |
1 |
Negative Genetic |
| FPK1 |
YNR047W |
Ser/Thr protein kinase |
physical |
1 |
1 |
1 |
Protein-RNA |
| MIH1 |
YMR036C |
Protein tyrosine phosphatase |
physical |
1 |
1 |
1 |
Protein-RNA |
| SKI2 |
YLR398C |
Ski complex component and putative RNA helicase |
genetic |
1 |
1 |
1 |
Positive Genetic |
| CLB2 |
YPR119W |
B-type cyclin involved in cell cycle progression |
physical |
1 |
1 |
1 |
Protein-RNA |
| CLB2 |
YPR119W |
B-type cyclin involved in cell cycle progression |
genetic |
1 |
1 |
1 |
Phenotypic Suppression |
| AHC1 |
YOR023C |
Subunit of the Ada histone acetyltransferase complex |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| SWE1 |
YJL187C |
Protein kinase that regulates the G2/M transition |
physical |
1 |
1 |
1 |
Protein-RNA |
| NUP1 |
YOR098C |
FG-nucleoporin component of central core of the nuclear pore complex |
physical |
1 |
1 |
1 |
Protein-RNA |
| HXT5 |
YHR096C |
Hexose transporter with moderate affinity for glucose |
physical |
1 |
1 |
1 |
Protein-RNA |
| FKH2 |
YNL068C |
Forkhead family transcription factor |
physical |
1 |
1 |
1 |
Protein-RNA |
| TPK3 |
YKL166C |
cAMP-dependent protein kinase catalytic subunit |
physical |
1 |
1 |
1 |
Biochemical Activity |
| TPK3 |
YKL166C |
cAMP-dependent protein kinase catalytic subunit |
genetic |
1 |
1 |
1 |
Negative Genetic |
| RAD53 |
YPL153C |
DNA damage response kinase |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| SAN1 |
YDR143C |
Ubiquitin-protein ligase |
physical |
1 |
1 |
1 |
Protein-RNA |
| TEF4 |
YKL081W |
Gamma subunit of translational elongation factor eEF1B |
physical |
1 |
1 |
1 |
Protein-RNA |
| DEF1 |
YKL054C |
RNAPII degradation factor |
physical |
1 |
1 |
1 |
PCA |
| IST3 |
YIR005W |
Component of the U2 snRNP |
genetic |
1 |
1 |
1 |
Negative Genetic |
| SEF1 |
YBL066C |
Putative transcription factor |
physical |
1 |
1 |
1 |
Protein-RNA |
| SKT5 |
YBL061C |
Activator of Chs3p (chitin synthase III) during vegetative growth |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| MSG5 |
YNL053W |
Dual-specificity protein phosphatase |
physical |
1 |
1 |
1 |
Protein-RNA |
| CLN2 |
YPL256C |
G1 cyclin involved in regulation of the cell cycle |
genetic |
1 |
1 |
1 |
Phenotypic Suppression |
| RIM11 |
YMR139W |
Protein kinase |
physical |
1 |
1 |
1 |
Protein-RNA |
| UBC4 |
YBR082C |
Ubiquitin-conjugating enzyme (E2) |
physical |
1 |
1 |
1 |
Protein-RNA |
| NUP133 |
YKR082W |
Subunit of Nup84p subcomplex of nuclear pore complex (NPC) |
genetic |
1 |
1 |
1 |
Negative Genetic |
| ESS1 |
YJR017C |
Peptidylprolyl-cis/trans-isomerase (PPIase) |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| STE11 |
YLR362W |
Signal transducing MEK kinase |
genetic |
1 |
1 |
1 |
Phenotypic Suppression |
| FZF1 |
YGL254W |
Transcription factor involved in sulfite metabolism |
physical |
1 |
1 |
1 |
Protein-RNA |
| GLG2 |
YJL137C |
Glycogenin glucosyltransferase |
physical |
1 |
1 |
1 |
Protein-RNA |
| AFT1 |
YGL071W |
Transcription factor involved in iron utilization and homeostasis |
physical |
1 |
1 |
1 |
Protein-RNA |
| HST3 |
YOR025W |
Sirtuin, histone H3 deacetylase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| ISU2 |
YOR226C |
Mitochondrial protein required for iron-sulfur protein synthesis |
physical |
1 |
1 |
1 |
Protein-RNA |
| BIT61 |
YJL058C |
Subunit of TORC2 membrane-associated complex |
physical |
1 |
1 |
1 |
Protein-RNA |
| PEX18 |
YHR160C |
Peroxin |
genetic |
1 |
1 |
1 |
Negative Genetic |
| GNP1 |
YDR508C |
Broad specificity amino acid permease |
physical |
1 |
1 |
1 |
Protein-RNA |
| QCR6 |
YFR033C |
Subunit 6 of the ubiquinol cytochrome-c reductase complex |
physical |
1 |
1 |
1 |
Protein-RNA |
| BAS1 |
YKR099W |
Myb-related transcription factor |
physical |
1 |
1 |
1 |
Protein-RNA |
| PUT3 |
YKL015W |
Transcriptional activator |
physical |
1 |
1 |
1 |
Protein-RNA |
| AIM7 |
YDR063W |
Protein that interacts with Arp2/3 complex |
genetic |
1 |
1 |
1 |
Negative Genetic |
| RMD5 |
YDR255C |
Component of GID Complex that confers ubiquitin ligase (U3) activity |
physical |
1 |
1 |
1 |
Protein-RNA |
| ASK10 |
YGR097W |
Regulator of the Fps1p glycerol channel |
physical |
1 |
1 |
1 |
Protein-RNA |
| ASK10 |
YGR097W |
Regulator of the Fps1p glycerol channel |
genetic |
1 |
1 |
1 |
Positive Genetic |
| AIM4 |
YBR194W |
Protein proposed to be associated with the nuclear pore complex |
genetic |
1 |
1 |
1 |
Negative Genetic |
| CDC26 |
YFR036W |
Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) |
physical |
1 |
1 |
1 |
Protein-RNA |
| CLB1 |
YGR108W |
B-type cyclin involved in cell cycle progression |
physical |
1 |
1 |
1 |
Protein-RNA |
| COG7 |
YGL005C |
Component of the conserved oligomeric Golgi complex |
physical |
1 |
1 |
1 |
Protein-RNA |
| GIP3 |
YPL137C |
Cytoplasmic protein that regulates protein phosphatase 1 Glc7p |
physical |
1 |
1 |
1 |
Protein-RNA |
| MRP2 |
YPR166C |
Mitochondrial ribosomal protein of the small subunit |
physical |
1 |
1 |
1 |
Protein-RNA |
| AMD1 |
YML035C |
AMP deaminase |
physical |
1 |
1 |
1 |
Protein-RNA |
| SAC3 |
YDR159W |
mRNA export factor |
genetic |
1 |
1 |
1 |
Positive Genetic |
| SWD2 |
YKL018W |
Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex |
physical |
1 |
1 |
1 |
Protein-RNA |
| SWR1 |
YDR334W |
Swi2/Snf2-related ATPase |
genetic |
1 |
1 |
1 |
Negative Genetic |
| SWC5 |
YBR231C |
Component of the SWR1 complex |
genetic |
1 |
1 |
1 |
Positive Genetic |
| TAF9 |
YMR236W |
Subunit (17 kDa) of TFIID and SAGA complexes |
physical |
1 |
1 |
1 |
Protein-RNA |
| IES3 |
YLR052W |
Subunit of the INO80 chromatin remodeling complex |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| SNF11 |
YDR073W |
Subunit of the SWI/SNF chromatin remodeling complex |
genetic |
1 |
1 |
1 |
Negative Genetic |
| SNF6 |
YHL025W |
Subunit of the SWI/SNF chromatin remodeling complex |
genetic |
1 |
1 |
1 |
Positive Genetic |
| SFL1 |
YOR140W |
Transcriptional repressor and activator |
genetic |
1 |
1 |
1 |
Negative Genetic |
| RPS8A |
YBL072C |
Protein component of the small (40S) ribosomal subunit |
genetic |
1 |
1 |
1 |
Negative Genetic |
| PLC1 |
YPL268W |
Phospholipase C |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| STB1 |
YNL309W |
Protein with role in regulation of MBF-specific transcription at Start |
physical |
1 |
1 |
1 |
Protein-RNA |
| MOT2 |
YER068W |
Ubiquitin-protein ligase subunit of the CCR4-NOT complex |
physical |
1 |
1 |
1 |
PCA |
| DBF4 |
YDR052C |
Regulatory subunit of Cdc7p-Dbf4p kinase complex |
physical |
1 |
1 |
1 |
Protein-RNA |
| ELO2 |
YCR034W |
Fatty acid elongase, involved in sphingolipid biosynthesis |
physical |
1 |
1 |
1 |
Protein-RNA |
| MPS1 |
YDL028C |
Dual-specificity kinase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| OST3 |
YOR085W |
Gamma subunit of the oligosaccharyltransferase complex of the ER lumen |
physical |
1 |
1 |
1 |
Protein-RNA |
| PNG1 |
YPL096W |
Conserved peptide N-glycanase |
genetic |
1 |
1 |
1 |
Positive Genetic |
| SIZ1 |
YDR409W |
SUMO E3 ligase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| SRO7 |
YPR032W |
Effector of Rab GTPase Sec4p |
genetic |
1 |
1 |
1 |
Positive Genetic |
| SSA1 |
YAL005C |
ATPase involved in protein folding and NLS-directed nuclear transport |
physical |
1 |
1 |
1 |
Affinity Capture-Western |
| STE2 |
YFL026W |
Receptor for alpha-factor pheromone |
physical |
1 |
1 |
1 |
Protein-RNA |
| TUB4 |
YLR212C |
Gamma-tubulin |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| PHO2 |
YDL106C |
Homeobox transcription factor |
genetic |
1 |
1 |
1 |
Negative Genetic |
| SNX4 |
YJL036W |
Sorting nexin |
genetic |
1 |
1 |
1 |
Positive Genetic |
| SSA2 |
YLL024C |
HSP70 family ATP-binding protein |
physical |
1 |
1 |
1 |
Affinity Capture-Western |
| OST4 |
YDL232W |
Subunit of the oligosaccharyltransferase complex of the ER lumen |
genetic |
1 |
1 |
1 |
Negative Genetic |
| MBF1 |
YOR298C-A |
Transcriptional coactivator |
physical |
1 |
1 |
1 |
Protein-RNA |
| SEC31 |
YDL195W |
Component of the Sec13p-Sec31p complex of the COPII vesicle coat |
physical |
1 |
1 |
1 |
Protein-RNA |
| SML1 |
YML058W |
Ribonucleotide reductase inhibitor |
physical |
1 |
1 |
1 |
Protein-RNA |
| STE50 |
YCL032W |
Adaptor protein for various signaling pathways |
genetic |
1 |
1 |
1 |
Negative Genetic |
| VPS4 |
YPR173C |
AAA-ATPase involved in multivesicular body (MVB) protein sorting |
genetic |
1 |
1 |
1 |
Negative Genetic |
| CAF16 |
YFL028C |
Part of evolutionarily-conserved CCR4-NOT regulatory complex |
genetic |
1 |
1 |
1 |
Positive Genetic |
| AAD3 |
YCR107W |
Putative aryl-alcohol dehydrogenase |
physical |
1 |
1 |
1 |
Protein-RNA |
| ATC1 |
YDR184C |
Nuclear protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| ALY1 |
YKR021W |
Alpha arrestin, substrate of calcineurin |
physical |
1 |
1 |
1 |
Protein-RNA |
| MID2 |
YLR332W |
O-glycosylated plasma membrane protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| HKR1 |
YDR420W |
Mucin family member that functions as an osmosensor in the HOG pathway |
physical |
1 |
1 |
1 |
Protein-RNA |
| GPR1 |
YDL035C |
Plasma membrane G protein coupled receptor (GPCR) |
genetic |
1 |
1 |
1 |
Positive Genetic |
| SHO1 |
YER118C |
Transmembrane osmosensor for filamentous growth and HOG pathways |
genetic |
1 |
1 |
1 |
Negative Genetic |
| SST2 |
YLR452C |
GTPase-activating protein for Gpa1p |
physical |
1 |
1 |
1 |
Protein-RNA |
| MGA1 |
YGR249W |
Protein similar to heat shock transcription factor |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| NUP42 |
YDR192C |
FG-nucleoporin component of central core of the nuclear pore complex |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| RPL1A |
YPL220W |
Ribosomal 60S subunit protein L1A |
genetic |
1 |
1 |
1 |
Negative Genetic |
| CLA4 |
YNL298W |
Cdc42p-activated signal transducing kinase |
physical |
1 |
1 |
1 |
Protein-RNA |
| NIP100 |
YPL174C |
Large subunit of the dynactin complex |
genetic |
1 |
1 |
1 |
Positive Genetic |
| CPR7 |
YJR032W |
Peptidyl-prolyl cis-trans isomerase (cyclophilin) |
physical |
1 |
1 |
1 |
Protein-RNA |
| HHT2 |
YNL031C |
Histone H3 |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| KEX2 |
YNL238W |
Kexin, a subtilisin-like protease (proprotein convertase) |
physical |
1 |
1 |
1 |
Protein-RNA |
| AUR1 |
YKL004W |
Phosphatidylinositol:ceramide phosphoinositol transferase |
physical |
1 |
1 |
1 |
Protein-RNA |
| ERV29 |
YGR284C |
Protein localized to COPII-coated vesicles |
physical |
1 |
1 |
1 |
Protein-RNA |
| MSL5 |
YLR116W |
Component of commitment complex |
physical |
1 |
1 |
1 |
Protein-RNA |
| PMT4 |
YJR143C |
Protein O-mannosyltransferase |
physical |
1 |
1 |
1 |
Protein-RNA |
| RIM20 |
YOR275C |
Protein involved in proteolytic activation of Rim101p |
genetic |
1 |
1 |
1 |
Negative Genetic |
| KAP120 |
YPL125W |
Karyopherin responsible for the nuclear import of Rpf1p |
physical |
1 |
1 |
1 |
Protein-RNA |
| CBP1 |
YJL209W |
Mitochondrial protein, regulator of COB mRNA stability and translation |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| SSB2 |
YNL209W |
Cytoplasmic ATPase that is a ribosome-associated molecular chaperone |
physical |
1 |
1 |
1 |
Co-purification |
| EAF7 |
YNL136W |
Subunit of the NuA4 histone acetyltransferase complex |
genetic |
1 |
1 |
1 |
Negative Genetic |
| RAX1 |
YOR301W |
Protein involved in establishing bud site selection |
physical |
1 |
1 |
1 |
Protein-RNA |
| TEC1 |
YBR083W |
Transcription factor targeting filamentation genes and Ty1 expression |
physical |
1 |
1 |
1 |
Protein-RNA |
| SNU13 |
YEL026W |
RNA binding protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| IXR1 |
YKL032C |
Transcriptional repressor that regulates hypoxic genes during normoxia |
genetic |
1 |
1 |
1 |
Negative Genetic |
| PGU1 |
YJR153W |
Endo-polygalacturonase |
physical |
1 |
1 |
1 |
Protein-RNA |
| BOP3 |
YNL042W |
Protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| GTA1 |
YEL043W |
Protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| POM152 |
YMR129W |
Glycoprotein subunit of transmembrane ring of nuclear pore complex |
physical |
1 |
1 |
1 |
Protein-RNA |
| PAC1 |
YOR269W |
Regulator of dynein, involved in intracellular transport |
physical |
1 |
1 |
1 |
Protein-RNA |
| PTR3 |
YFR029W |
Component of the SPS plasma membrane amino acid sensor system |
physical |
1 |
1 |
1 |
Protein-RNA |
| POG1 |
YIL122W |
DNA-binding transcriptional activator |
physical |
1 |
1 |
1 |
Protein-RNA |
| HLR1 |
YDR528W |
Protein involved in regulation of cell wall composition and integrity |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| HNM1 |
YGL077C |
Plasma membrane transporter for choline, ethanolamine, and carnitine |
physical |
1 |
1 |
1 |
Protein-RNA |
| SIA1 |
YOR137C |
Protein of unassigned function |
physical |
1 |
1 |
1 |
Protein-RNA |
| CAN1 |
YEL063C |
Plasma membrane arginine permease |
physical |
1 |
1 |
1 |
Protein-RNA |
| BAP3 |
YDR046C |
Amino acid permease |
physical |
1 |
1 |
1 |
Protein-RNA |
| ESBP6 |
YNL125C |
Protein with similarity to monocarboxylate permeases |
physical |
1 |
1 |
1 |
Protein-RNA |
| FUN26 |
YAL022C |
High affinity, broad selectivity, nucleoside/nucleobase transporter |
physical |
1 |
1 |
1 |
Protein-RNA |
| MIG3 |
YER028C |
Transcriptional regulator |
physical |
1 |
1 |
1 |
Protein-RNA |
| ATP14 |
YLR295C |
Subunit h of the F0 sector of mitochondrial F1F0 ATP synthase |
physical |
1 |
1 |
1 |
Protein-RNA |
| MRH1 |
YDR033W |
Protein that localizes primarily to the plasma membrane |
physical |
1 |
1 |
1 |
Protein-RNA |
| NCE102 |
YPR149W |
Protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| RIM1 |
YCR028C-A |
ssDNA-binding protein essential for mitochondrial genome maintenance |
physical |
1 |
1 |
1 |
PCA |
| ASE1 |
YOR058C |
Mitotic spindle midzone-localized microtubule bundling protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| LYS20 |
YDL182W |
Homocitrate synthase isozyme and functions in DNA repair |
physical |
1 |
1 |
1 |
Protein-RNA |
| SWD3 |
YBR175W |
Essential subunit of the COMPASS (Set1C) complex |
physical |
1 |
1 |
1 |
Protein-RNA |
| DSE4 |
YNR067C |
Daughter cell-specific secreted protein with similarity to glucanases |
physical |
1 |
1 |
1 |
Protein-RNA |
| PMT5 |
YDL093W |
Protein O-mannosyltransferase |
genetic |
1 |
1 |
1 |
Negative Genetic |
| PUF4 |
YGL014W |
Member of the PUF protein family |
physical |
1 |
1 |
1 |
PCA |
| SEM1 |
YDR363W-A |
19S proteasome regulatory particle lid subcomplex component |
genetic |
1 |
1 |
1 |
Positive Genetic |
| SNN1 |
YNL086W |
Subunit of the BLOC-1 complex involved in endosomal maturation |
genetic |
1 |
1 |
1 |
Negative Genetic |
| SLX8 |
YER116C |
Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| FCY21 |
YER060W |
Putative purine-cytosine permease |
genetic |
1 |
1 |
1 |
Negative Genetic |
| FIG2 |
YCR089W |
Cell wall adhesin, expressed specifically during mating |
physical |
1 |
1 |
1 |
Protein-RNA |
| TDA7 |
YNL176C |
Cell cycle-regulated gene of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| NKP2 |
YLR315W |
Central kinetochore protein and subunit of the Ctf19 complex |
genetic |
1 |
1 |
1 |
Negative Genetic |
| CSR1 |
YLR380W |
Phosphatidylinositol transfer protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| RTC3 |
YHR087W |
Protein of unknown function involved in RNA metabolism |
genetic |
1 |
1 |
1 |
Negative Genetic |
| RPP1A |
YDL081C |
Ribosomal stalk protein P1 alpha |
genetic |
1 |
1 |
1 |
Positive Genetic |
| OLE1 |
YGL055W |
Delta(9) fatty acid desaturase |
physical |
1 |
1 |
1 |
Protein-RNA |
| ANB1 |
YJR047C |
Translation elongation factor eIF-5A |
physical |
1 |
1 |
1 |
Protein-RNA |
| KIN4 |
YOR233W |
Serine/threonine protein kinase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| LAM1 |
YHR155W |
Putative sterol transfer protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| RTT109 |
YLL002W |
Histone acetyltransferase |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| MSA2 |
YKR077W |
Putative transcriptional activator |
physical |
1 |
1 |
1 |
Protein-RNA |
| SMT1 |
YJL147C |
Translational repressor of the mitochondrial ATP6/8 mRNA |
genetic |
1 |
1 |
1 |
Negative Genetic |
| TBF1 |
YPL128C |
Telobox-containing general regulatory factor |
physical |
1 |
1 |
1 |
Protein-RNA |
| CAJ1 |
YER048C |
Nuclear type II J heat shock protein of the E. coli dnaJ family |
genetic |
1 |
1 |
1 |
Negative Genetic |
| MDM36 |
YPR083W |
Mitochondrial protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| ANY1 |
YMR010W |
Protein involved in phospholipid flippase function |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| FLO11 |
YIR019C |
GPI-anchored cell surface glycoprotein (flocculin) |
genetic |
1 |
1 |
1 |
Dosage Rescue |
| GIS2 |
YNL255C |
Translational activator for mRNAs with internal ribosome entry sites |
genetic |
1 |
1 |
1 |
Negative Genetic |
| CYC7 |
YEL039C |
Cytochrome c isoform 2, expressed under hypoxic conditions |
physical |
1 |
1 |
1 |
Protein-RNA |
| SEA4 |
YBL104C |
Subunit of SEACAT, a subcomplex of the SEA complex |
physical |
1 |
1 |
1 |
Protein-RNA |
| GEM1 |
YAL048C |
Outer mitochondrial membrane GTPase, subunit of the ERMES complex |
genetic |
1 |
1 |
1 |
Negative Genetic |
| RPS21A |
YKR057W |
Protein component of the small (40S) ribosomal subunit |
genetic |
1 |
1 |
1 |
Positive Genetic |
| OCA5 |
YHL029C |
Cytoplasmic protein required for replication of Brome mosaic virus |
physical |
1 |
1 |
1 |
Protein-RNA |
| OCA5 |
YHL029C |
Cytoplasmic protein required for replication of Brome mosaic virus |
genetic |
1 |
1 |
1 |
Negative Genetic |
| IGD1 |
YFR017C |
Cytoplasmic protein that inhibits Gdb1p glycogen debranching activity |
physical |
1 |
1 |
1 |
Protein-RNA |
| PAL2 |
YHR097C |
Protein involved in clathrin-mediated endocytosis |
genetic |
1 |
1 |
1 |
Negative Genetic |
| NGL3 |
YML118W |
3'-5' exonuclease specific for poly-A RNAs |
physical |
1 |
1 |
1 |
Protein-RNA |
| MLF3 |
YNL074C |
Serine-rich protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| IRC23 |
YOR044W |
Protein of unknown function involved in multidrug resistance |
physical |
1 |
1 |
1 |
Protein-RNA |
| GAS3 |
YMR215W |
Putative 1,3-beta-glucanosyltransferase |
physical |
1 |
1 |
1 |
Protein-RNA |
| SCS22 |
YBL091C-A |
Protein involved in regulation of phospholipid metabolism |
physical |
1 |
1 |
1 |
Protein-RNA |
| MET2 |
YNL277W |
L-homoserine-O-acetyltransferase |
physical |
1 |
1 |
1 |
Protein-RNA |
| PUF2 |
YPR042C |
PUF family mRNA-binding protein |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| AGE1 |
YDR524C |
ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector |
physical |
1 |
1 |
1 |
Protein-RNA |
| SDS23 |
YGL056C |
Protein involved in cell separation during budding |
physical |
1 |
1 |
1 |
Protein-RNA |
| RGM1 |
YMR182C |
Putative zinc finger DNA binding transcription factor |
physical |
1 |
1 |
1 |
Protein-RNA |
| MPD1 |
YOR288C |
Member of the protein disulfide isomerase (PDI) family |
physical |
1 |
1 |
1 |
Protein-RNA |
| SNX41 |
YDR425W |
Sorting nexin |
physical |
1 |
1 |
1 |
Protein-RNA |
| STR2 |
YJR130C |
Cystathionine gamma-synthase, converts cysteine into cystathionine |
physical |
1 |
1 |
1 |
Protein-RNA |
| STP3 |
YLR375W |
Zinc-finger protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| VPS55 |
YJR044C |
Late endosomal protein involved in late endosome to vacuole transport |
physical |
1 |
1 |
1 |
Protein-RNA |
| SCD6 |
YPR129W |
Repressor of translation initiation |
physical |
1 |
1 |
1 |
PCA |
| RGS2 |
YOR107W |
Negative regulator of glucose-induced cAMP signaling |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| EOS1 |
YNL080C |
Protein involved in N-glycosylation |
physical |
1 |
1 |
1 |
Protein-RNA |
| EOS1 |
YNL080C |
Protein involved in N-glycosylation |
genetic |
1 |
1 |
1 |
Positive Genetic |
| NCR1 |
YPL006W |
Vacuolar membrane protein involved with Npc2p in sterol trafficking |
physical |
1 |
1 |
1 |
Protein-RNA |
| NRM1 |
YNR009W |
Transcriptional co-repressor of MBF-regulated gene expression |
physical |
1 |
1 |
1 |
Protein-RNA |
| MRPL49 |
YJL096W |
Mitochondrial ribosomal protein of the large subunit |
physical |
1 |
1 |
1 |
Protein-RNA |
| SVP26 |
YHR181W |
ER exit adaptor for Golgi mannosyltransferases |
physical |
1 |
1 |
1 |
Protein-RNA |
| PFA3 |
YNL326C |
Palmitoyltransferase for Vac8p |
physical |
1 |
1 |
1 |
Protein-RNA |
| CRH1 |
YGR189C |
Chitin transglycosylase |
physical |
1 |
1 |
1 |
Protein-RNA |
| BXI1 |
YNL305C |
Protein involved in apoptosis |
physical |
1 |
1 |
1 |
Protein-RNA |
| MPS3 |
YJL019W |
Nuclear envelope protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| SNQ2 |
YDR011W |
Plasma membrane ATP-binding cassette (ABC) transporter |
physical |
1 |
1 |
1 |
Protein-RNA |
| ENA1 |
YDR040C |
P-type ATPase sodium pump |
physical |
1 |
1 |
1 |
Protein-RNA |
| ENA2 |
YDR039C |
P-type ATPase sodium pump |
physical |
1 |
1 |
1 |
Protein-RNA |
| ENA5 |
YDR038C |
Protein with similarity to P-type ATPase sodium pumps |
physical |
1 |
1 |
1 |
Protein-RNA |
| SHE4 |
YOR035C |
Protein containing a UCS (UNC-45/CRO1/SHE4) domain |
genetic |
1 |
1 |
1 |
Negative Genetic |
| PHO8 |
YDR481C |
Repressible vacuolar alkaline phosphatase |
physical |
1 |
1 |
1 |
Protein-RNA |
| POM34 |
YLR018C |
Subunit of the transmembrane ring of the nuclear pore complex (NPC) |
physical |
1 |
1 |
1 |
Protein-RNA |
| SUM1 |
YDR310C |
Transcriptional repressor that regulates middle-sporulation genes |
physical |
1 |
1 |
1 |
Protein-RNA |
| MUP1 |
YGR055W |
High affinity methionine permease |
physical |
1 |
1 |
1 |
Protein-RNA |
| MEP3 |
YPR138C |
Ammonium permease of high capacity and low affinity |
physical |
1 |
1 |
1 |
Protein-RNA |
| COT1 |
YOR316C |
Vacuolar transporter that mediates zinc transport into the vacuole |
physical |
1 |
1 |
1 |
Protein-RNA |
| MDM32 |
YOR147W |
Mitochondrial inner membrane protein with similarity to Mdm31p |
physical |
1 |
1 |
1 |
Protein-RNA |
| BSC1 |
YDL037C |
Protein of unconfirmed function |
physical |
1 |
1 |
1 |
Protein-RNA |
| FMP25 |
YLR077W |
Protein required for assembly of respiratory complex III |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| TPO4 |
YOR273C |
Polyamine transporter of the major facilitator superfamily |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| ALG12 |
YNR030W |
Alpha-1,6-mannosyltransferase localized to the ER |
physical |
1 |
1 |
1 |
Protein-RNA |
| GPI13 |
YLL031C |
ER membrane localized phosphoryltransferase |
physical |
1 |
1 |
1 |
Protein-RNA |
| CCW12 |
YLR110C |
Cell wall mannoprotein |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| KRE1 |
YNL322C |
Cell wall glycoprotein involved in beta-glucan assembly |
physical |
1 |
1 |
1 |
Protein-RNA |
| YPL113C |
YPL113C |
Glyoxylate reductase |
physical |
1 |
1 |
1 |
Protein-RNA |
| YHP1 |
YDR451C |
Homeobox transcriptional repressor |
physical |
1 |
1 |
1 |
Protein-RNA |
| YOX1 |
YML027W |
Homeobox transcriptional repressor |
physical |
1 |
1 |
1 |
Protein-RNA |
| YDL206W |
YDL206W |
Putative protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| WHI4 |
YDL224C |
Putative RNA binding protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| YAR066W |
YAR066W |
Putative GPI protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| YOR062C |
YOR062C |
Protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| YKE4 |
YIL023C |
Zinc transporter |
physical |
1 |
1 |
1 |
Protein-RNA |
| ZRG17 |
YNR039C |
Endoplasmic reticulum zinc transporter |
physical |
1 |
1 |
1 |
Protein-RNA |
| YEA4 |
YEL004W |
Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter |
physical |
1 |
1 |
1 |
Protein-RNA |
| YMR209C |
YMR209C |
Putative S-adenosylmethionine-dependent methyltransferase |
physical |
1 |
1 |
1 |
Protein-RNA |
| YBL081W |
YBL081W |
Non-essential protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| ZIP2 |
YGL249W |
Meiosis-specific protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| YPL068C |
YPL068C |
Protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| YDR541C |
YDR541C |
Aldehyde reductase |
physical |
1 |
1 |
1 |
Protein-RNA |
| YML020W |
YML020W |
Putative protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| YPL039W |
YPL039W |
Putative protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| YHL012W |
YHL012W |
Putative UTP glucose-1-phosphate uridylyltransferase |
physical |
1 |
1 |
1 |
Protein-RNA |
| YHK8 |
YHR048W |
Presumed antiporter of the major facilitator superfamily |
physical |
1 |
1 |
1 |
Protein-RNA |
| YDL180W |
YDL180W |
Putative protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| YNL046W |
YNL046W |
Putative protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| YHR138C |
YHR138C |
Protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| YPL162C |
YPL162C |
Putative protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| YDL109C |
YDL109C |
Putative lipase |
physical |
1 |
1 |
1 |
Protein-RNA |
| YLR297W |
YLR297W |
Protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| XBP1 |
YIL101C |
Transcriptional repressor |
physical |
1 |
1 |
1 |
Protein-RNA |
| YJL163C |
YJL163C |
Putative protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| ZRT2 |
YLR130C |
Low-affinity zinc transporter of the plasma membrane |
physical |
1 |
1 |
1 |
Protein-RNA |
| YLR108C |
YLR108C |
Protein of unknown function |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| XRN1 |
YGL173C |
Evolutionarily-conserved 5'-3' exonuclease |
genetic |
1 |
1 |
1 |
Positive Genetic |
| YHR045W |
YHR045W |
Putative protein of unknown function |
genetic |
1 |
1 |
1 |
Negative Genetic |
| YLR287C |
YLR287C |
Putative protein of unknown function |
genetic |
1 |
1 |
1 |
Positive Genetic |
| YAK1 |
YJL141C |
Serine-threonine protein kinase |
genetic |
1 |
1 |
1 |
Dosage Rescue |
| YBR225W |
YBR225W |
Putative protein of unknown function |
genetic |
1 |
1 |
1 |
Negative Genetic |
| YME1 |
YPR024W |
Catalytic subunit of i-AAA protease complex |
genetic |
1 |
1 |
1 |
Negative Genetic |
| YTA6 |
YPL074W |
Putative ATPase of the CDC48/PAS1/SEC18 (AAA) family |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| YPC1 |
YBR183W |
Alkaline ceramidase |
genetic |
1 |
1 |
1 |
Positive Genetic |
| CDS1 |
YBR029C |
Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase) |
physical |
1 |
1 |
1 |
Protein-RNA |
| ISC1 |
YER019W |
Inositol phosphosphingolipid phospholipase C |
physical |
1 |
1 |
1 |
Protein-RNA |
| DSE2 |
YHR143W |
Daughter cell-specific secreted protein with similarity to glucanases |
physical |
1 |
1 |
1 |
Protein-RNA |
| DAT1 |
YML113W |
DNA binding protein that recognizes oligo(dA).oligo(dT) tracts |
physical |
1 |
1 |
1 |
Protein-RNA |
| CSI2 |
YOL007C |
Protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| AFB1 |
YLR040C |
MATalpha-specific a-factor blocker |
physical |
1 |
1 |
1 |
Protein-RNA |
| AGA1 |
YNR044W |
Anchorage subunit of a-agglutinin of a-cells |
physical |
1 |
1 |
1 |
Protein-RNA |
| GPI18 |
YBR004C |
Functional ortholog of human PIG-V |
physical |
1 |
1 |
1 |
Protein-RNA |
| CRT10 |
YOL063C |
Protein required for the degradation of mutant 25S rRNAs |
physical |
1 |
1 |
1 |
Protein-RNA |
| RFU1 |
YLR073C |
Protein that inhibits Doa4p deubiquitinating activity |
physical |
1 |
1 |
1 |
Protein-RNA |
| CLB6 |
YGR109C |
B-type cyclin involved in DNA replication during S phase |
physical |
1 |
1 |
1 |
Protein-RNA |
| PIR3 |
YKL163W |
O-glycosylated covalently-bound cell wall protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| SUT1 |
YGL162W |
Zn(II)2Cys6 family transcription factor |
physical |
1 |
1 |
1 |
Protein-RNA |
| MTL1 |
YGR023W |
Putative plasma membrane sensor |
physical |
1 |
1 |
1 |
Protein-RNA |
| SLY41 |
YOR307C |
Protein involved in ER-to-Golgi transport |
physical |
1 |
1 |
1 |
Protein-RNA |
| VHR1 |
YIL056W |
Transcriptional activator |
physical |
1 |
1 |
1 |
Protein-RNA |
| TVS1 |
YCR061W |
Protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| TVS1 |
YCR061W |
Protein of unknown function |
genetic |
1 |
1 |
1 |
Negative Genetic |
| DUG3 |
YNL191W |
Component of glutamine amidotransferase (GATase II) |
physical |
1 |
1 |
1 |
Protein-RNA |
| SMP3 |
YOR149C |
Alpha 1,2-mannosyltransferase |
physical |
1 |
1 |
1 |
Protein-RNA |
| VTS1 |
YOR359W |
Flap-structured DNA-binding and RNA-binding protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| TRS65 |
YGR166W |
Component of transport protein particle (TRAPP) complex II |
physical |
1 |
1 |
1 |
Protein-RNA |
| OPT1 |
YJL212C |
Proton-coupled oligopeptide transporter of the plasma membrane |
physical |
1 |
1 |
1 |
Protein-RNA |
| OPI3 |
YJR073C |
Methylene-fatty-acyl-phospholipid synthase |
physical |
1 |
1 |
1 |
Protein-RNA |
| NSG2 |
YNL156C |
Protein involved in regulation of sterol biosynthesis |
physical |
1 |
1 |
1 |
Protein-RNA |
| IML2 |
YJL082W |
Protein required for clearance of inclusion bodies |
physical |
1 |
1 |
1 |
Protein-RNA |
| STP2 |
YHR006W |
Transcription factor |
physical |
1 |
1 |
1 |
Protein-RNA |
| MPC3 |
YGR243W |
Highly conserved subunit of the mitochondrial pyruvate carrier (MPC) |
physical |
1 |
1 |
1 |
Protein-RNA |
| PEX8 |
YGR077C |
Intraperoxisomal organizer of the peroxisomal import machinery |
physical |
1 |
1 |
1 |
Protein-RNA |
| MHO1 |
YJR008W |
Protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| APT2 |
YDR441C |
Potential adenine phosphoribosyltransferase |
physical |
1 |
1 |
1 |
Protein-RNA |
| SED4 |
YCR067C |
Integral ER membrane protein that stimulates Sar1p GTPase activity |
physical |
1 |
1 |
1 |
Protein-RNA |
| PHA2 |
YNL316C |
Prephenate dehydratase |
physical |
1 |
1 |
1 |
Protein-RNA |
| TPC1 |
YGR096W |
Mitochondrial membrane transporter |
physical |
1 |
1 |
1 |
Protein-RNA |
| TPH3 |
YJL016W |
Putative protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| SAG1 |
YJR004C |
Alpha-agglutinin of alpha-cells |
physical |
1 |
1 |
1 |
Protein-RNA |
| VNX1 |
YNL321W |
Calcium/H+ antiporter localized to the endoplasmic reticulum membrane |
physical |
1 |
1 |
1 |
Protein-RNA |
| POS5 |
YPL188W |
Mitochondrial NADH kinase |
physical |
1 |
1 |
1 |
Protein-RNA |
| LCB4 |
YOR171C |
Sphingoid long-chain base kinase |
physical |
1 |
1 |
1 |
Protein-RNA |
| VHC1 |
YBR235W |
Vacuolar membrane cation-chloride cotransporter (CCC) |
physical |
1 |
1 |
1 |
Protein-RNA |
| TOS6 |
YNL300W |
Glycosylphosphatidylinositol-dependent cell wall protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| SWS2 |
YNL081C |
Putative mitochondrial ribosomal protein of the small subunit |
physical |
1 |
1 |
1 |
Protein-RNA |
| TMA17 |
YDL110C |
Regulatory gamma subunit of fatty acid synthase (FAS) |
physical |
1 |
1 |
1 |
Protein-RNA |
| SPT21 |
YMR179W |
Protein with a role in transcriptional silencing |
physical |
1 |
1 |
1 |
Protein-RNA |
| ROQ1 |
YJL144W |
Ub-ligase substrate-specificity factor |
physical |
1 |
1 |
1 |
Protein-RNA |
| QCR9 |
YGR183C |
Subunit 9 of ubiquinol cytochrome-c reductase (Complex III) |
physical |
1 |
1 |
1 |
Protein-RNA |
| UTR2 |
YEL040W |
Chitin transglycosylase |
physical |
1 |
1 |
1 |
Protein-RNA |
| COX20 |
YDR231C |
Mitochondrial inner membrane protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| SCW10 |
YMR305C |
Cell wall protein with similarity to glucanases |
physical |
1 |
1 |
1 |
Protein-RNA |
| SET6 |
YPL165C |
SET domain protein of unknown function |
physical |
1 |
1 |
1 |
Protein-RNA |
| RSB1 |
YOR049C |
Sphingoid long-chain base (LCB) efflux transporter |
physical |
1 |
1 |
1 |
Protein-RNA |
| RCE1 |
YMR274C |
Type II CAAX prenyl protease |
physical |
1 |
1 |
1 |
Protein-RNA |
| UIP5 |
YKR044W |
Protein of unknown function that interacts with Ulp1p |
physical |
1 |
1 |
1 |
Protein-RNA |
| KHA1 |
YJL094C |
Putative K+/H+ antiporter |
physical |
1 |
1 |
1 |
Protein-RNA |
| MTO1 |
YGL236C |
Mitochondrial protein |
physical |
1 |
1 |
1 |
Protein-RNA |
| PIR1 |
YKL164C |
O-glycosylated protein required for cell wall stability |
physical |
1 |
1 |
1 |
Protein-RNA |
| TUM1 |
YOR251C |
Rhodanese domain sulfur transferase |
genetic |
1 |
1 |
1 |
Negative Genetic |
| MRM2 |
YGL136C |
Mitochondrial 2' O-ribose methyltransferase |
genetic |
1 |
1 |
1 |
Positive Genetic |
| CNE1 |
YAL058W |
Calnexin |
genetic |
1 |
1 |
1 |
Negative Genetic |
| SLD3 |
YGL113W |
Protein involved in the initiation of DNA replication |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| RTC2 |
YBR147W |
Putative vacuolar membrane transporter for cationic amino acids |
genetic |
1 |
1 |
1 |
Positive Genetic |
| TOP3 |
YLR234W |
DNA Topoisomerase III |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| SUL2 |
YLR092W |
High affinity sulfate permease |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| PET20 |
YPL159C |
Mitochondrial protein |
genetic |
1 |
1 |
1 |
Negative Genetic |
| SDH9 |
YJL045W |
Minor succinate dehydrogenase isozyme |
genetic |
1 |
1 |
1 |
Negative Genetic |
| AGP3 |
YFL055W |
Low-affinity amino acid permease |
genetic |
1 |
1 |
1 |
Negative Genetic |
| KCH1 |
YJR054W |
Potassium transporter that mediates K+ influx |
genetic |
1 |
1 |
1 |
Positive Genetic |
| PUS2 |
YGL063W |
Mitochondrial tRNA:pseudouridine synthase |
genetic |
1 |
1 |
1 |
Negative Genetic |
| SUL1 |
YBR294W |
High affinity sulfate permease of the SulP anion transporter family |
genetic |
1 |
1 |
1 |
Negative Genetic |
| TMA23 |
YMR269W |
Nucleolar protein implicated in ribosome biogenesis |
genetic |
1 |
1 |
1 |
Negative Genetic |
| VSB1 |
YGR125W |
Vacuolar membrane protein required for uptake and storage of arginine |
genetic |
1 |
1 |
1 |
Positive Genetic |
