GEnome-wide tool for Multi-scale Modeling
data Extraction and Representation
for Saccharomyces cerevisiae

List of interactors

Use the search utility to find the interactor you are looking for. By clicking the column headers the table will be sorted on that column. Use shift+click to sort on multiple columns. Default sorting is on number of experiments, number of unique methods and the number of publications, and alphabetical on standard name, in that order.

Standard name	Systematic name	Name description	Type	#Experiments	#Methods	#Publications	Evidence
RTC4	YNL254C	Protein of unknown function	regulation	5	4	4	chromatin immunoprecipitation-chip evidence, DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence, northern blot evidence, quantitative reverse transcription polymerase chain reaction evidence
ZRG17	YNR039C	Endoplasmic reticulum zinc transporter	regulation	4	3	3	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence, electrophoretic mobility shift assay evidence, S1 nuclease protection assay evidence
RAD27	YKL113C	5' to 3' exonuclease, 5' flap endonuclease	regulation	3	2	3	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence, quantitative reverse transcription polymerase chain reaction evidence
DPP1	YDR284C	Diacylglycerol pyrophosphate (DGPP) phosphatase	regulation	3	2	3	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence, quantitative reverse transcription polymerase chain reaction evidence
NRG2	YBR066C	Transcriptional repressor	regulation	3	2	3	chromatin immunoprecipitation-chip evidence, DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
ZRT3	YKL175W	Vacuolar membrane zinc transporter	regulation	3	2	3	chromatin immunoprecipitation-chip evidence, DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
ZRT1	YGL255W	High-affinity zinc transporter of the plasma membrane	regulation	3	1	3	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
ZRT2	YLR130C	Low-affinity zinc transporter of the plasma membrane	regulation	3	1	3	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
ETR1	YBR026C	2-enoyl thioester reductase	regulation	3	3	1	beta-galactosidase reporter gene assay evidence, electrophoretic mobility shift assay evidence, quantitative reverse transcription polymerase chain reaction evidence
POX1	YGL205W	Fatty-acyl coenzyme A oxidase	regulation	2	2	2	chromatin immunoprecipitation-chip evidence, quantitative reverse transcription polymerase chain reaction evidence
ZAP1	YJL056C	Zinc-regulated transcription factor	regulation	2	2	2	chromatin immunoprecipitation-chip evidence, DNA to cDNA expression microarray evidence
WHI3	YNL197C	RNA binding protein that modulates mRNA stability	physical	2	2	2	Protein-RNA, Affinity Capture-RNA
GRE2	YOL151W	3-methylbutanal reductase and NADPH-dependent methylglyoxal reductase	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
ADH4	YGL256W	Alcohol dehydrogenase isoenzyme type IV	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
PST1	YDR055W	Cell wall protein that contains a putative GPI-attachment site	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
SEG1	YMR086W	Component of eisosome required for proper eisosome assembly	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
YLL020C	YLL020C	Dubious open reading frame	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
COS1	YNL336W	Endosomal protein involved in turnover of plasma membrane proteins	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
COS2	YBR302C	Endosomal protein involved in turnover of plasma membrane proteins	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
COS4	YFL062W	Endosomal protein involved in turnover of plasma membrane proteins	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
COS6	YGR295C	Endosomal protein involved in turnover of plasma membrane proteins	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
COS8	YHL048W	Endosomal protein involved in turnover of plasma membrane proteins	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
COS3	YML132W	Endosomal protein involved in turnover of plasma membrane proteins	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
ADE17	YMR120C	Enzyme of 'de novo' purine biosynthesis	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
FET4	YMR319C	Low-affinity Fe(II) transporter of the plasma membrane	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
MNT2	YGL257C	Mannosyltransferase	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
IZH1	YDR492W	Membrane protein involved in zinc ion homeostasis	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
URA10	YMR271C	Minor orotate phosphoribosyltransferase (OPRTase) isozyme	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
IZH2	YOL002C	Plasma membrane receptor for plant antifungal osmotin	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
GPG1	YGL121C	Proposed gamma subunit of the heterotrimeric G protein	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
TPO5	YKL174C	Protein involved in excretion of putrescine and spermidine	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
MCD4	YKL165C	Protein involved in GPI anchor synthesis	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
PHM7	YOL084W	Protein of unknown function	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
VEL1	YGL258W	Protein of unknown function	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
ATG41	YPL250C	Protein of unknown function	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
MOH1	YBL049W	Protein of unknown function, essential for stationary phase survival	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
YNL234W	YNL234W	Protein of unknown function with similarity to globins	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
MNN14	YJR061W	Protein required for N-glycan mannosylphosphorylation	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
ZPS1	YOL154W	Putative GPI-anchored protein	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
RRT1	YBL048W	Putative protein of unknown function	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
YOR387C	YOR387C	Putative protein of unknown function	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
YOL131W	YOL131W	Putative protein of unknown function	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
BAG7	YOR134W	Rho GTPase activating protein (RhoGAP)	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
TKL2	YBR117C	Transketolase	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
ZIP1	YDR285W	Transverse filament protein of the synaptonemal complex	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
PEP4	YPL154C	Vacuolar aspartyl protease (proteinase A)	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
PRC1	YMR297W	Vacuolar carboxypeptidase Y (proteinase C, CPY)	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
ZRC1	YMR243C	Vacuolar membrane zinc transporter	regulation	2	1	2	DNA to cDNA expression microarray evidence, DNA to cDNA expression microarray evidence
ZRT1	YGL255W	High-affinity zinc transporter of the plasma membrane	genetic	2	2	1	Phenotypic Suppression, Phenotypic Enhancement
VPS1	YKR001C	Dynamin-like GTPase required for vacuolar sorting	genetic	2	1	1	Phenotypic Suppression, Phenotypic Suppression
ARF1	YDL192W	ADP-ribosylation factor	genetic	2	1	1	Phenotypic Suppression, Phenotypic Suppression
GET2	YER083C	Subunit of the GET complex	genetic	2	1	1	Phenotypic Suppression, Phenotypic Suppression
TAF9	YMR236W	Subunit (17 kDa) of TFIID and SAGA complexes	genetic	2	1	1	Synthetic Lethality, Synthetic Lethality
PHO80	YOL001W	Cyclin	genetic	2	1	1	Phenotypic Suppression, Phenotypic Suppression
RER1	YCL001W	Protein involved in retention of membrane proteins	genetic	2	1	1	Phenotypic Suppression, Phenotypic Suppression
EMC6	YLL014W	Member of conserved ER transmembrane complex	genetic	2	1	1	Phenotypic Suppression, Phenotypic Suppression
SSH1	YBR283C	Subunit of the Ssh1 translocon complex	genetic	2	1	1	Phenotypic Suppression, Phenotypic Suppression
UBX2	YML013W	Bridging factor involved in ER-associated protein degradation (ERAD)	genetic	2	1	1	Phenotypic Suppression, Phenotypic Suppression
SEY1	YOR165W	Dynamin-like GTPase that mediates homotypic ER fusion	genetic	2	1	1	Phenotypic Suppression, Phenotypic Suppression
ALG12	YNR030W	Alpha-1,6-mannosyltransferase localized to the ER	genetic	2	1	1	Phenotypic Suppression, Phenotypic Suppression
SPC2	YML055W	Subunit of signal peptidase complex	genetic	2	1	1	Phenotypic Suppression, Phenotypic Suppression
ALG8	YOR067C	Glucosyl transferase	genetic	2	1	1	Phenotypic Suppression, Phenotypic Suppression
SPF1	YEL031W	P-type ATPase, ion transporter of the ER membrane	genetic	2	1	1	Phenotypic Suppression, Phenotypic Suppression
IXR1	YKL032C	Transcriptional repressor that regulates hypoxic genes during normoxia	regulation	1	1	1	DNA to cDNA expression microarray evidence
MED2	YDL005C	Subunit of the RNA polymerase II mediator complex	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
XBP1	YIL101C	Transcriptional repressor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SUA7	YPR086W	Transcription factor TFIIB	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ACB1	YGR037C	Acyl-CoA-binding protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HNT1	YDL125C	Adenosine 5'-monophosphoramidase	regulation	1	1	1	DNA to cDNA expression microarray evidence
MET14	YKL001C	Adenylylsulfate kinase	regulation	1	1	1	DNA to cDNA expression microarray evidence
YPK2	YMR104C	AGC-type S/T protein kinase	regulation	1	1	1	DNA to cDNA expression microarray evidence
ADH1	YOL086C	Alcohol dehydrogenase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
AKR2	YOR034C	Ankyrin repeat-containing protein	regulation	1	1	1	DNA to cDNA expression microarray evidence
SCW4	YGR279C	Cell wall protein with similarity to glucanases	regulation	1	1	1	DNA to cDNA expression microarray evidence
YGP1	YNL160W	Cell wall-related secretory glycoprotein	regulation	1	1	1	DNA to cDNA expression microarray evidence
CKI1	YLR133W	Choline kinase	regulation	1	1	1	DNA to cDNA expression microarray evidence
ALG14	YBR070C	Component of UDP-GlcNAc transferase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
LAP3	YNL239W	Cysteine aminopeptidase with homocysteine-thiolactonase activity	regulation	1	1	1	DNA to cDNA expression microarray evidence
ALD3	YMR169C	Cytoplasmic aldehyde dehydrogenase	regulation	1	1	1	DNA to cDNA expression microarray evidence
ALD2	YMR170C	Cytoplasmic aldehyde dehydrogenase	regulation	1	1	1	DNA to cDNA expression microarray evidence
SGN1	YIR001C	Cytoplasmic RNA-binding protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ALD6	YPL061W	Cytosolic aldehyde dehydrogenase	regulation	1	1	1	DNA to cDNA expression microarray evidence
CTT1	YGR088W	Cytosolic catalase T	regulation	1	1	1	DNA to cDNA expression microarray evidence
ASP1	YDR321W	Cytosolic L-asparaginase, involved in asparagine catabolism	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RDH54	YBR073W	DNA-dependent ATPase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RAD54	YGL163C	DNA-dependent ATPase that stimulates strand exchange	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SYN8	YAL014C	Endosomal SNARE related to mammalian syntaxin 8	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ENO1	YGR254W	Enolase I, a phosphopyruvate hydratase	regulation	1	1	1	DNA to cDNA expression microarray evidence
ENO2	YHR174W	Enolase II, a phosphopyruvate hydratase	regulation	1	1	1	DNA to cDNA expression microarray evidence
SOP4	YJL192C	ER-membrane protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
EKI1	YDR147W	Ethanolamine kinase	regulation	1	1	1	DNA to cDNA expression microarray evidence
TDH1	YJL052W	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 1	regulation	1	1	1	DNA to cDNA expression microarray evidence
TOH1	YJL171C	GPI-anchored cell wall protein of unknown function	regulation	1	1	1	DNA to cDNA expression microarray evidence
ASC1	YMR116C	G-protein beta subunit and guanine dissociation inhibitor for Gpa2p	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CIN2	YPL241C	GTPase-activating protein (GAP) for Cin4p	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HPF1	YOL155C	Haze-protective mannoprotein	regulation	1	1	1	DNA to cDNA expression microarray evidence
FTR1	YER145C	High affinity iron permease	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MUP1	YGR055W	High affinity methionine permease	regulation	1	1	1	DNA to cDNA expression microarray evidence
SAM3	YPL274W	High-affinity S-adenosylmethionine permease	regulation	1	1	1	DNA to cDNA expression microarray evidence
MPC3	YGR243W	Highly conserved subunit of the mitochondrial pyruvate carrier (MPC)	regulation	1	1	1	DNA to cDNA expression microarray evidence
HOS2	YGL194C	Histone deacetylase and subunit of Set3 and Rpd3L complexes	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SND3	YBR106W	Involved in SRP-independent protein targeting to the ER	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SOG2	YOR353C	Key component of the RAM signaling network	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TSL1	YML100W	Large subunit of trehalose 6-phosphate synthase/phosphatase complex	regulation	1	1	1	DNA to cDNA expression microarray evidence
SED1	YDR077W	Major stress-induced structural GPI-cell wall glycoprotein	regulation	1	1	1	DNA to cDNA expression microarray evidence
VAS1	YGR094W	Mitochondrial and cytoplasmic valyl-tRNA synthetase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CEM1	YER061C	Mitochondrial beta-keto-acyl synthase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MDL1	YLR188W	Mitochondrial inner membrane half-type ABC transporter	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
UTH1	YKR042W	Mitochondrial inner membrane protein	regulation	1	1	1	DNA to cDNA expression microarray evidence
MRPL16	YBL038W	Mitochondrial ribosomal protein of the large subunit	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RSM10	YDR041W	Mitochondrial ribosomal protein of the small subunit	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TIS11	YLR136C	mRNA-binding protein expressed during iron starvation	regulation	1	1	1	DNA to cDNA expression microarray evidence
HSP30	YCR021C	Negative regulator of the H(+)-ATPase Pma1p	regulation	1	1	1	DNA to cDNA expression microarray evidence
YBL029W	YBL029W	Non-essential protein of unknown function	regulation	1	1	1	DNA to cDNA expression microarray evidence
DSK2	YMR276W	Nuclear-enriched ubiquitin-like polyubiquitin-binding protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
NVJ1	YHR195W	Nuclear envelope protein	regulation	1	1	1	DNA to cDNA expression microarray evidence
PIR3	YKL163W	O-glycosylated covalently-bound cell wall protein	regulation	1	1	1	DNA to cDNA expression microarray evidence
COQ2	YNR041C	Para hydroxybenzoate polyprenyl transferase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ARO1	YDR127W	Pentafunctional arom protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PGC1	YPL206C	Phosphatidylglycerol phospholipase C	regulation	1	1	1	quantitative reverse transcription polymerase chain reaction evidence
PIS1	YPR113W	Phosphatidylinositol synthase	regulation	1	1	1	DNA to cDNA expression microarray evidence
PHO89	YBR296C	Plasma membrane Na+/Pi cotransporter	regulation	1	1	1	DNA to cDNA expression microarray evidence
HSP12	YFL014W	Plasma membrane protein involved in maintaining membrane organization	regulation	1	1	1	DNA to cDNA expression microarray evidence
TPO4	YOR273C	Polyamine transporter of the major facilitator superfamily	regulation	1	1	1	DNA to cDNA expression microarray evidence
PUT4	YOR348C	Proline permease	regulation	1	1	1	DNA to cDNA expression microarray evidence
RPS11B	YBR048W	Protein component of the small (40S) ribosomal subunit	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TEX1	YNL253W	Protein involved in mRNA export	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
LDS1	YAL018C	Protein Involved in spore wall assembly	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
GIN4	YDR507C	Protein kinase involved in bud growth and assembly of the septin ring	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YLR108C	YLR108C	Protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YMR262W	YMR262W	Protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YMR181C	YMR181C	Protein of unknown function	regulation	1	1	1	DNA to cDNA expression microarray evidence
YMR316C-A	YMR316C-A	Protein of unknown function	regulation	1	1	1	DNA to cDNA expression microarray evidence
CSS1	YIL169C	Protein of unknown function, secreted when constitutively expressed	regulation	1	1	1	DNA to cDNA expression microarray evidence
YHC3	YJL059W	Protein required for the ATP-dependent transport of arginine	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
KEL2	YGR238C	Protein that negatively regulates mitotic exit	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CUZ1	YNL155W	Protein with a role in the ubiquitin-proteasome pathway	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YNR071C	YNR071C	Putative aldose 1-epimerase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YHR210C	YHR210C	Putative aldose 1-epimerase superfamily protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YNR066C	YNR066C	Putative membrane-localized protein of unknown function	regulation	1	1	1	DNA to cDNA expression microarray evidence
YLL053C	YLL053C	Putative protein	regulation	1	1	1	DNA to cDNA expression microarray evidence
YLR412C-A	YLR412C-A	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
LOG1	YJL055W	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YJL132W	YJL132W	Putative protein of unknown function	regulation	1	1	1	DNA to cDNA expression microarray evidence
YCR101C	YCR101C	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YHR214W	YHR214W	Putative protein of unknown function	regulation	1	1	1	DNA to cDNA expression microarray evidence
YBR285W	YBR285W	Putative protein of unknown function	regulation	1	1	1	DNA to cDNA expression microarray evidence
YML096W	YML096W	Putative protein with similarity to asparagine synthetases	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YPR003C	YPR003C	Putative sulfate permease	regulation	1	1	1	DNA to cDNA expression microarray evidence
PIG2	YIL045W	Putative type-1 protein phosphatase targeting subunit	regulation	1	1	1	DNA to cDNA expression microarray evidence
ATG19	YOL082W	Receptor protein for the cytoplasm-to-vacuole targeting (Cvt) pathway	regulation	1	1	1	DNA to cDNA expression microarray evidence
SEI1	YLR404W	Seipin involved in lipid droplet (LD) assembly	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HSP26	YBR072W	Small heat shock protein (sHSP) with chaperone activity	regulation	1	1	1	DNA to cDNA expression microarray evidence
PMP3	YDR276C	Small plasma membrane protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YEH2	YLR020C	Steryl ester hydrolase	regulation	1	1	1	quantitative reverse transcription polymerase chain reaction evidence
LST4	YKL176C	Subunit of the Lst4p-Lst7p GTPase activating protein complex for Gtr2p	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SPC1	YJR010C-A	Subunit of the signal peptidase complex (SPC)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
AHP1	YLR109W	Thiol-specific peroxiredoxin	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TSA1	YML028W	Thioredoxin peroxidase	regulation	1	1	1	DNA to cDNA expression microarray evidence
UBI4	YLL039C	Ubiquitin	regulation	1	1	1	northern blot evidence
UBX6	YJL048C	UBX (ubiquitin regulatory X) domain-containing protein	regulation	1	1	1	DNA to cDNA expression microarray evidence
PRB1	YEL060C	Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity	regulation	1	1	1	DNA to cDNA expression microarray evidence
MET32	YDR253C	Zinc-finger DNA-binding transcription factor	regulation	1	1	1	DNA to cDNA expression microarray evidence
SEN1	YLR430W	ATP-dependent 5' to 3' RNA/DNA and DNA helicase	regulation	1	1	1	northern blot evidence
CHD1	YER164W	Chromatin remodeler that regulates various aspects of transcription	genetic	1	1	1	Positive Genetic
MCM22	YJR135C	Outer kinetochore protein and component of the Ctf3 subcomplex	genetic	1	1	1	Positive Genetic
EAF5	YEL018W	Non-essential subunit of the NuA4 acetyltransferase complex	genetic	1	1	1	Negative Genetic
LSM1	YJL124C	Lsm (Like Sm) protein	genetic	1	1	1	Negative Genetic
RRP6	YOR001W	Nuclear exosome exonuclease component	genetic	1	1	1	Negative Genetic
RPA49	YNL248C	RNA polymerase I subunit A49	genetic	1	1	1	Negative Genetic
CCR4	YAL021C	Component of the CCR4-NOT transcriptional complex	physical	1	1	1	Affinity Capture-RNA
NAM7	YMR080C	ATP-dependent RNA helicase of the SFI superfamily	genetic	1	1	1	Phenotypic Suppression
DHH1	YDL160C	Cytoplasmic DEAD-box helicase and mRNA decapping activator	physical	1	1	1	Affinity Capture-RNA
ISW1	YBR245C	ATPase subunit of imitation-switch (ISWI) class chromatin remodelers	physical	1	1	1	Affinity Capture-RNA
MYO2	YOR326W	Type V myosin motor involved in actin-based transport of cargos	genetic	1	1	1	Negative Genetic
PAC10	YGR078C	Part of the heteromeric co-chaperone GimC/prefoldin complex	genetic	1	1	1	Negative Genetic
PHO23	YNL097C	Component of the Rpd3L histone deacetylase complex	genetic	1	1	1	Positive Genetic
SET3	YKR029C	Defining member of the SET3 histone deacetylase complex	genetic	1	1	1	Positive Genetic
SGF73	YGL066W	Subunit of DUBm module of SAGA and SLIK	genetic	1	1	1	Negative Genetic
SRP54	YPR088C	Signal recognition particle (SRP) subunit (homolog of mammalian SRP54)	physical	1	1	1	Co-purification
SPT8	YLR055C	Subunit of the SAGA transcriptional regulatory complex	genetic	1	1	1	Negative Genetic
BCK1	YJL095W	MAPKKK acting in the protein kinase C signaling pathway	genetic	1	1	1	Dosage Growth Defect
HEK2	YBL032W	RNA binding protein involved in asymmetric localization of ASH1 mRNA	physical	1	1	1	Affinity Capture-RNA
CRZ1	YNL027W	Transcription factor, activates transcription of stress response genes	genetic	1	1	1	Negative Genetic
FKH1	YIL131C	Forkhead family transcription factor	genetic	1	1	1	Negative Genetic
HOG1	YLR113W	Mitogen-activated protein kinase involved in osmoregulation	genetic	1	1	1	Dosage Growth Defect
SLT2	YHR030C	Serine/threonine MAP kinase	genetic	1	1	1	Dosage Growth Defect
SWI5	YDR146C	Transcription factor that recruits Mediator and Swi/Snf complexes	genetic	1	1	1	Negative Genetic
MCK1	YNL307C	Dual-specificity ser/thr and tyrosine protein kinase	genetic	1	1	1	Dosage Growth Defect
GCR2	YNL199C	Transcriptional activator of genes involved in glycolysis	genetic	1	1	1	Negative Genetic
MAD3	YJL013C	Subunit of spindle-assembly checkpoint complex	genetic	1	1	1	Negative Genetic
RIM101	YHL027W	Cys2His2 zinc-finger transcriptional repressor	physical	1	1	1	Two-hybrid
STB2	YMR053C	Protein that interacts with Sin3p in a two-hybrid assay	genetic	1	1	1	Negative Genetic
HOT1	YMR172W	Transcription factor for glycerol biosynthetic genes	genetic	1	1	1	Negative Genetic
SWR1	YDR334W	Swi2/Snf2-related ATPase	genetic	1	1	1	Negative Genetic
IES4	YOR189W	Component of the INO80 chromatiin remodeling complex	genetic	1	1	1	Positive Genetic
SWI6	YLR182W	Transcription cofactor	genetic	1	1	1	Negative Genetic
CTF8	YHR191C	Subunit of a complex with Ctf18p	genetic	1	1	1	Positive Genetic
DBP5	YOR046C	Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family	genetic	1	1	1	Synthetic Lethality
GIM4	YEL003W	Subunit of the heterohexameric cochaperone prefoldin complex	genetic	1	1	1	Positive Genetic
TRA1	YHR099W	Subunit of SAGA and NuA4 histone acetyltransferase complexes	physical	1	1	1	PCA
MBF1	YOR298C-A	Transcriptional coactivator	genetic	1	1	1	Negative Genetic
SML1	YML058W	Ribonucleotide reductase inhibitor	physical	1	1	1	Affinity Capture-MS
GTS1	YGL181W	Protein involved in Arf3p regulation and in transcription regulation	genetic	1	1	1	Negative Genetic
ASH1	YKL185W	Component of the Rpd3L histone deacetylase complex	genetic	1	1	1	Negative Genetic
HAC1	YFL031W	Basic leucine zipper (bZIP) transcription factor (ATF/CREB1 homolog)	genetic	1	1	1	Negative Genetic
SOH1	YGL127C	Subunit of the RNA polymerase II mediator complex	genetic	1	1	1	Negative Genetic
PIN3	YPR154W	Negative regulator of actin nucleation-promoting factor activity	physical	1	1	1	Two-hybrid
TEC1	YBR083W	Transcription factor targeting filamentation genes and Ty1 expression	genetic	1	1	1	Negative Genetic
HCM1	YCR065W	Forkhead transcription factor	genetic	1	1	1	Negative Genetic
GAT2	YMR136W	Protein containing GATA family zinc finger motifs	genetic	1	1	1	Negative Genetic
TOS8	YGL096W	Homeodomain-containing protein and putative transcription factor	genetic	1	1	1	Negative Genetic
UBP3	YER151C	Ubiquitin-specific protease that cleaves Ub-protein fusions	genetic	1	1	1	Negative Genetic
ETR1	YBR026C	2-enoyl thioester reductase	genetic	1	1	1	Phenotypic Suppression
SBA1	YKL117W	Co-chaperone that binds and regulates Hsp90 family chaperones	genetic	1	1	1	Synthetic Lethality
RTT107	YHR154W	BRCA1 C-terminal domain protein needed for recovery from DNA damage	genetic	1	1	1	Synthetic Growth Defect
CTH1	YDR151C	mRNA binding protein, member of the CCCH zinc finger family	genetic	1	1	1	Negative Genetic
ECM22	YLR228C	Sterol regulatory element binding protein	genetic	1	1	1	Negative Genetic
SUB1	YMR039C	Transcriptional regulator	genetic	1	1	1	Positive Genetic
SUM1	YDR310C	Transcriptional repressor that regulates middle-sporulation genes	genetic	1	1	1	Negative Genetic
MSN1	YOL116W	Transcriptional activator	genetic	1	1	1	Negative Genetic
RPI1	YIL119C	Transcription factor, allelic differences between S288C and Sigma1278b	genetic	1	1	1	Negative Genetic
AFT2	YPL202C	Iron-regulated transcriptional activator	genetic	1	1	1	Negative Genetic
YTA7	YGR270W	Chromatin-binding ATPase that regulates histone gene expression	genetic	1	1	1	Negative Genetic
ZDS2	YML109W	Protein with a role in regulating Swe1p-dependent polarized growth	genetic	1	1	1	Negative Genetic