| PUF3 | 
                 YLL013C  | 
                 Protein of the mitochondrial outer surface  | 
                 physical | 
                 3  | 
                 1  | 
                 3  | 
                 Affinity Capture-RNA, Affinity Capture-RNA, Affinity Capture-RNA  | 
            
            
                | SDH1 | 
                 YKL148C  | 
                 Flavoprotein subunit of succinate dehydrogenase  | 
                 physical | 
                 3  | 
                 2  | 
                 2  | 
                 Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western  | 
            
            
                | RAD4 | 
                 YER162C  | 
                 Damaged-DNA binding subunit of Nuclear Excision Repair Factor 2  | 
                 genetic | 
                 3  | 
                 1  | 
                 2  | 
                 Negative Genetic, Negative Genetic, Negative Genetic  | 
            
            
                | EST1 | 
                 YLR233C  | 
                 TLC1 RNA-associated factor involved in telomere length regulation  | 
                 genetic | 
                 2  | 
                 2  | 
                 2  | 
                 Synthetic Growth Defect, Negative Genetic  | 
            
            
                | SDH1 | 
                 YKL148C  | 
                 Flavoprotein subunit of succinate dehydrogenase  | 
                 genetic | 
                 2  | 
                 2  | 
                 2  | 
                 Dosage Rescue, Phenotypic Suppression  | 
            
            
                | LPD1 | 
                 YFL018C  | 
                 Dihydrolipoamide dehydrogenase  | 
                 genetic | 
                 2  | 
                 1  | 
                 2  | 
                 Positive Genetic, Positive Genetic  | 
            
            
                | HIR1 | 
                 YBL008W  | 
                 Subunit of the HIR complex  | 
                 genetic | 
                 2  | 
                 1  | 
                 2  | 
                 Negative Genetic, Negative Genetic  | 
            
            
                | PEX12 | 
                 YMR026C  | 
                 C3HC4-type RING-finger peroxin and E3 ubiquitin ligase  | 
                 genetic | 
                 2  | 
                 1  | 
                 2  | 
                 Negative Genetic, Negative Genetic  | 
            
            
                | DER1 | 
                 YBR201W  | 
                 ER membrane protein that promotes export of misfolded polypeptides  | 
                 genetic | 
                 2  | 
                 1  | 
                 2  | 
                 Negative Genetic, Negative Genetic  | 
            
            
                | ERG3 | 
                 YLR056W  | 
                 C-5 sterol desaturase  | 
                 genetic | 
                 2  | 
                 1  | 
                 2  | 
                 Negative Genetic, Negative Genetic  | 
            
            
                | VID28 | 
                 YIL017C  | 
                 GID Complex subunit, serves as adaptor for regulatory subunit Vid24p  | 
                 genetic | 
                 2  | 
                 1  | 
                 2  | 
                 Negative Genetic, Negative Genetic  | 
            
            
                | FKH1 | 
                 YIL131C  | 
                 Forkhead family transcription factor  | 
                 regulation | 
                 1  | 
                 1  | 
                 1  | 
                 chromatin immunoprecipitation-chip evidence  | 
            
            
                | SPT10 | 
                 YJL127C  | 
                 Histone H3 acetylase with a role in transcriptional regulation  | 
                 regulation | 
                 1  | 
                 1  | 
                 1  | 
                 DNA to cDNA expression microarray evidence  | 
            
            
                | POB3 | 
                 YML069W  | 
                 Subunit of the heterodimeric FACT complex (Spt16p-Pob3p)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | POP4 | 
                 YBR257W  | 
                 Subunit of both RNase MRP and nuclear RNase P  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | LSM6 | 
                 YDR378C  | 
                 Lsm (Like Sm) protein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | NUT1 | 
                 YGL151W  | 
                 Component of the RNA polymerase II mediator complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | ILS1 | 
                 YBL076C  | 
                 Cytoplasmic isoleucine-tRNA synthetase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RPN8 | 
                 YOR261C  | 
                 Essential non-ATPase regulatory subunit of the 26S proteasome  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | GCD1 | 
                 YOR260W  | 
                 Gamma subunit of the translation initiation factor eIF2B  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | NAB2 | 
                 YGL122C  | 
                 Nuclear polyadenylated RNA-binding protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-RNA  | 
            
            
                | CDC11 | 
                 YJR076C  | 
                 Component of the septin ring that is required for cytokinesis  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | IPP1 | 
                 YBR011C  | 
                 Cytoplasmic inorganic pyrophosphatase (PPase)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | POL1 | 
                 YNL102W  | 
                 Catalytic subunit of the DNA polymerase I alpha-primase complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Synthetic Rescue  | 
            
            
                | PTI1 | 
                 YGR156W  | 
                 Essential component of CPF (cleavage and polyadenylation factor)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | MED8 | 
                 YBR193C  | 
                 Subunit of the RNA polymerase II mediator complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | PHO23 | 
                 YNL097C  | 
                 Component of the Rpd3L histone deacetylase complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RPP2B | 
                 YDR382W  | 
                 Ribosomal protein P2 beta  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RPT4 | 
                 YOR259C  | 
                 ATPase of the 19S regulatory particle of the 26S proteasome  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | CDC13 | 
                 YDL220C  | 
                 Single stranded DNA-binding protein found at TG1-3 telomere G-tails  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | PYC1 | 
                 YGL062W  | 
                 Pyruvate carboxylase isoform  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | HYP2 | 
                 YEL034W  | 
                 Translation elongation factor eIF-5A  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | RVS161 | 
                 YCR009C  | 
                 Amphiphysin-like lipid raft protein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | PMA1 | 
                 YGL008C  | 
                 Plasma membrane P2-type H+-ATPase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | CHK1 | 
                 YBR274W  | 
                 Serine/threonine kinase and DNA damage checkpoint effector  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | GID8 | 
                 YMR135C  | 
                 Subunit of GID Complex, binds strongly to central component Vid30p  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RVS167 | 
                 YDR388W  | 
                 Calmodulin-binding actin-associated protein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | MAK11 | 
                 YKL021C  | 
                 Protein involved in an early step of 60S ribosomal subunit biogenesis  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | RAD14 | 
                 YMR201C  | 
                 Subunit of Nucleotide Excision Repair Factor 1 (NEF1)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | FZO1 | 
                 YBR179C  | 
                 Mitofusin, protein involved in mitochondrial outer membrane fusion  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | SAN1 | 
                 YDR143C  | 
                 Ubiquitin-protein ligase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | MDH3 | 
                 YDL078C  | 
                 Peroxisomal malate dehydrogenase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | BIR1 | 
                 YJR089W  | 
                 Subunit of chromosomal passenger complex (CPC)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | FIG1 | 
                 YBR040W  | 
                 Integral membrane protein required for efficient mating  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | INO2 | 
                 YDR123C  | 
                 Transcription factor  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | IPK1 | 
                 YDR315C  | 
                 Inositol 1,3,4,5,6-pentakisphosphate 2-kinase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | ASK10 | 
                 YGR097W  | 
                 Regulator of the Fps1p glycerol channel  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | COG4 | 
                 YPR105C  | 
                 Essential component of the conserved oligomeric Golgi complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | PEX5 | 
                 YDR244W  | 
                 Peroxisomal membrane signal receptor for peroxisomal matrix proteins  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RFT1 | 
                 YBL020W  | 
                 Membrane protein required for translocation of Man5GlcNac2-PP-Dol  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | MIF2 | 
                 YKL089W  | 
                 Centromeric CDEIII region binding protein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | CLC1 | 
                 YGR167W  | 
                 Clathrin light chain  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | MEX67 | 
                 YPL169C  | 
                 Poly(A)RNA binding protein involved in nuclear mRNA export  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | MNN11 | 
                 YJL183W  | 
                 Subunit of a Golgi mannosyltransferase complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | RDS3 | 
                 YPR094W  | 
                 Component of the SF3b subcomplex of the U2 snRNP  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | MON2 | 
                 YNL297C  | 
                 Protein with a role in endocytosis and vacuole integrity  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | IXR1 | 
                 YKL032C  | 
                 Transcriptional repressor that regulates hypoxic genes during normoxia  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | ORC6 | 
                 YHR118C  | 
                 Subunit of the origin recognition complex (ORC)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | NFS1 | 
                 YCL017C  | 
                 Cysteine desulfurase involved in iron-sulfur cluster biogenesis  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | HRQ1 | 
                 YDR291W  | 
                 3'-5' DNA helicase of the conserved RecQ family  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | EKI1 | 
                 YDR147W  | 
                 Ethanolamine kinase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | GID11 | 
                 YLR149C  | 
                 Substrate receptor of the glucose-induced degradation-deficient (GID)   | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | GUK1 | 
                 YDR454C  | 
                 Guanylate kinase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | BAR1 | 
                 YIL015W  | 
                 Aspartyl protease secreted to periplasmic space of mating type a cell  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | SAC1 | 
                 YKL212W  | 
                 Phosphatidylinositol phosphate phosphatase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | GIS2 | 
                 YNL255C  | 
                 Translational activator for mRNAs with internal ribosome entry sites  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-RNA  | 
            
            
                | PTK2 | 
                 YJR059W  | 
                 Serine/threonine protein kinase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | PIB2 | 
                 YGL023C  | 
                 Phosphatidylinositol 3-phosphate binding protein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | PCK1 | 
                 YKR097W  | 
                 Phosphoenolpyruvate carboxykinase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | PEX4 | 
                 YGR133W  | 
                 Peroxisomal ubiquitin conjugating enzyme  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | MRM2 | 
                 YGL136C  | 
                 Mitochondrial 2' O-ribose methyltransferase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | MAL33 | 
                 YBR297W  | 
                 MAL-activator protein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | ERG8 | 
                 YMR220W  | 
                 Phosphomevalonate kinase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | SLF1 | 
                 YDR515W  | 
                 RNA binding protein that associates with polysomes  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-RNA  | 
            
            
                | SSB2 | 
                 YNL209W  | 
                 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Co-purification  | 
            
            
                | SSC1 | 
                 YJR045C  | 
                 Hsp70 family ATPase  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | SSC1 | 
                 YJR045C  | 
                 Hsp70 family ATPase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | SPP381 | 
                 YBR152W  | 
                 mRNA splicing factor, component of U4/U6.U5 tri-snRNP  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | TYS1 | 
                 YGR185C  | 
                 Cytoplasmic tyrosyl-tRNA synthetase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | SWI3 | 
                 YJL176C  | 
                 Subunit of the SWI/SNF chromatin remodeling complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | TDA5 | 
                 YLR426W  | 
                 Putative protein of unknown function  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | TAO3 | 
                 YIL129C  | 
                 Component of the RAM signaling network  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | YGL114W | 
                 YGL114W  | 
                 Putative protein of unknown function  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | SNF4 | 
                 YGL115W  | 
                 Activating gamma subunit of the AMP-activated Snf1p kinase complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | YCH1 | 
                 YGR203W  | 
                 Phosphatase with sequence similarity to Mih1p  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | YCR102C | 
                 YCR102C  | 
                 Putative quinone oxidoreductase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | SSS1 | 
                 YDR086C  | 
                 Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | TAF12 | 
                 YDR145W  | 
                 Subunit (61/68 kDa) of TFIID and SAGA complexes  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | YRA1 | 
                 YDR381W  | 
                 Nuclear polyadenylated RNA-binding protein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | SUI3 | 
                 YPL237W  | 
                 Beta subunit of the translation initiation factor eIF2  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | SEC8 | 
                 YPR055W  | 
                 Essential 121 kDa subunit of the exocyst complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | UMP1 | 
                 YBR173C  | 
                 Chaperone required for correct maturation of the 20S proteasome  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | YDR262W | 
                 YDR262W  | 
                 Putative protein of unknown function  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | YER175W-A | 
                 YER175W-A  | 
                 Putative protein of unknown function  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | SFB3 | 
                 YHR098C  | 
                 Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | SND2 | 
                 YLR065C  | 
                 Protein involved in SRP-independent targeting of substrates to the ER  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | UCC1 | 
                 YLR224W  | 
                 F-box protein and component of SCF ubiquitin ligase complexes  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | YAR029W | 
                 YAR029W  | 
                 Member of DUP240 gene family but contains no transmembrane domains  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | SNF5 | 
                 YBR289W  | 
                 Subunit of the SWI/SNF chromatin remodeling complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | SLM3 | 
                 YDL033C  | 
                 tRNA-specific 2-thiouridylase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | TRX2 | 
                 YGR209C  | 
                 Cytoplasmic thioredoxin isoenzyme  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | YRA2 | 
                 YKL214C  | 
                 Member of the REF (RNA and export factor binding proteins) family  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | VPS9 | 
                 YML097C  | 
                 Guanine nucleotide exchange factor (GEF) and ubiquitin receptor  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | TUB4 | 
                 YLR212C  | 
                 Gamma-tubulin  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Synthetic Rescue  | 
            
            
                | SGS1 | 
                 YMR190C  | 
                 RecQ family nucleolar DNA helicase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | RSO55 | 
                 YLR281C  | 
                 Mitochondrial protein of unknown function  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  |