| COX1 | Q0045 | Subunit I of cytochrome c oxidase (Complex IV) | physical | 4 | 4 | 4 | Co-fractionation, Co-purification, Affinity Capture-MS, Affinity Capture-Western | 
            
                | IRA2 | YOL081W | GTPase-activating protein | genetic | 3 | 1 | 3 | Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | FKH1 | YIL131C | Forkhead family transcription factor | regulation | 2 | 2 | 2 | chromatin immunoprecipitation-chip evidence, ChEC-Seq experiments | 
            
                | FKH2 | YNL068C | Forkhead family transcription factor | regulation | 2 | 2 | 2 | chromatin immunoprecipitation-chip evidence, ChEC-Seq experiments | 
            
                | COX4 | YGL187C | Subunit IV of cytochrome c oxidase | physical | 2 | 2 | 2 | Affinity Capture-MS, Affinity Capture-Western | 
            
                | COX3 | Q0275 | Subunit III of cytochrome c oxidase (Complex IV) | physical | 2 | 2 | 2 | Co-purification, Affinity Capture-Western | 
            
                | COX2 | Q0250 | Subunit II of cytochrome c oxidase (Complex IV) | physical | 2 | 1 | 2 | Co-purification, Co-purification | 
            
                | ATP18 | YML081C-A | Subunit of the mitochondrial F1F0 ATP synthase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | DHH1 | YDL160C | Cytoplasmic DEAD-box helicase and mRNA decapping activator | physical | 2 | 1 | 2 | Affinity Capture-RNA, Affinity Capture-RNA | 
            
                | DEP1 | YAL013W | Component of the Rpd3L histone deacetylase complex | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | YBR238C | YBR238C | Mitochondrial membrane protein | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | MGR1 | YCL044C | Subunit of the mitochondrial (mt) i-AAA protease supercomplex | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | SOR2 | YDL246C | Sorbitol dehydrogenase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | FIN1 | YDR130C | Spindle pole body-related intermediate filament protein | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | IPK1 | YDR315C | Inositol 1,3,4,5,6-pentakisphosphate 2-kinase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | OMS1 | YDR316W | Protein integral to the mitochondrial membrane | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | PAC11 | YDR488C | Dynein intermediate chain, microtubule motor protein | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | EMI1 | YDR512C | Non-essential protein of unknown function | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | YPT31 | YER031C | Rab family GTPase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | UBP6 | YFR010W | Ubiquitin-specific protease | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | TAF6 | YGL112C | Subunit (60 kDa) of TFIID and SAGA complexes | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | RTS3 | YGR161C | Putative component of the protein phosphatase type 2A complex | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | LSC2 | YGR244C | Beta subunit of succinyl-CoA ligase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | SRB2 | YHR041C | Subunit of the RNA polymerase II mediator complex | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | ERP5 | YHR110W | Protein with similarity to Emp24p and Erv25p | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | VID28 | YIL017C | GID Complex subunit, serves as adaptor for regulatory subunit Vid24p | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | GSH1 | YJL101C | Gamma glutamylcysteine synthetase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | DID4 | YKL002W | Class E Vps protein of the ESCRT-III complex | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | TOF2 | YKR010C | Protein required for rDNA silencing and mitotic rDNA condensation | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | TRM9 | YML014W | tRNA methyltransferase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | MSS1 | YMR023C | Mitochondrial protein | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | SIN4 | YNL236W | Subunit of the RNA polymerase II mediator complex | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | PHO23 | YNL097C | Component of the Rpd3L histone deacetylase complex | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | VPS27 | YNR006W | Endosomal protein that forms a complex with Hse1p | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | DGK1 | YOR311C | Diacylglycerol kinase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | ILV1 | YER086W | Threonine deaminase, catalyzes first step in isoleucine biosynthesis | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | PDE2 | YOR360C | High-affinity cyclic AMP phosphodiesterase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | UTR1 | YJR049C | ATP-NADH kinase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | PTK2 | YJR059W | Serine/threonine protein kinase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | PFK1 | YGR240C | Alpha subunit of heterooctameric phosphofructokinase | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | PAB1 | YER165W | Poly(A) binding protein | genetic | 2 | 2 | 1 | Positive Genetic, Negative Genetic | 
            
                | TAO3 | YIL129C | Component of the RAM signaling network | genetic | 2 | 2 | 1 | Positive Genetic, Negative Genetic | 
            
                | SIN4 | YNL236W | Subunit of the RNA polymerase II mediator complex | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | CYC8 | YBR112C | General transcriptional co-repressor | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | HAP1 | YLR256W | Zinc finger transcription factor | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | HMS1 | YOR032C | bHLH protein with similarity to myc-family transcription factors | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | HAP4 | YKL109W | Transcription factor | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | COR1 | YBL045C | Core subunit of the ubiquinol-cytochrome c reductase complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | ARO1 | YDR127W | Pentafunctional arom protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ARP3 | YJR065C | Essential component of the Arp2/3 complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CCA1 | YER168C | ATP (CTP):tRNA-specific tRNA nucleotidyltransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CEG1 | YGL130W | Guanylyltransferase involved in mRNA 5' capping | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ATP2 | YJR121W | Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase | physical | 1 | 1 | 1 | Affinity Capture-Western | 
            
                | ATP4 | YPL078C | Subunit b of the stator stalk of mitochondrial F1F0 ATP synthase | physical | 1 | 1 | 1 | Affinity Capture-Western | 
            
                | ATP4 | YPL078C | Subunit b of the stator stalk of mitochondrial F1F0 ATP synthase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ADO1 | YJR105W | Adenosine kinase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ATG12 | YBR217W | Ubiquitin-like modifier involved in autophagy and the Cvt pathway | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CCT3 | YJL014W | Subunit of the cytosolic chaperonin Cct ring complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ADH3 | YMR083W | Mitochondrial alcohol dehydrogenase isozyme III | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | ADH3 | YMR083W | Mitochondrial alcohol dehydrogenase isozyme III | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | AIM46 | YHR199C | Protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | BCK2 | YER167W | Serine/threonine-rich protein involved in PKC1 signaling pathway | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | COQ10 | YOL008W | Coenzyme Q (ubiquinone) binding protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ACB1 | YGR037C | Acyl-CoA-binding protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | AQY3 | YFL054C | Putative channel-like protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CAB1 | YDR531W | Pantothenate kinase, ATP:D-pantothenate 4'-phosphotransferase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ALG9 | YNL219C | Mannosyltransferase, involved in N-linked glycosylation | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NAB2 | YGL122C | Nuclear polyadenylated RNA-binding protein | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | MIC60 | YKR016W | Component of the MICOS complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SRO9 | YCL037C | Cytoplasmic RNA-binding protein | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | PUF3 | YLL013C | Protein of the mitochondrial outer surface | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | VAM6 | YDL077C | Guanine nucleotide exchange factor for the GTPase Gtr1p | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | MPT5 | YGL178W | mRNA-binding protein of the PUF family | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | PET9 | YBL030C | Major ADP/ATP carrier of the mitochondrial inner membrane | physical | 1 | 1 | 1 | Affinity Capture-Western | 
            
                | QCR2 | YPR191W | Subunit 2 of ubiquinol cytochrome-c reductase (Complex III) | physical | 1 | 1 | 1 | Affinity Capture-Western | 
            
                | KGD1 | YIL125W | Subunit of the mitochondrial alpha-ketoglutarate dehydrogenase complex | physical | 1 | 1 | 1 | Affinity Capture-Western | 
            
                | TOM70 | YNL121C | Component of the TOM (translocase of outer membrane) complex | physical | 1 | 1 | 1 | Affinity Capture-Western | 
            
                | RIP1 | YEL024W | Ubiquinol-cytochrome-c reductase | physical | 1 | 1 | 1 | Affinity Capture-Western | 
            
                | TOM22 | YNL131W | Component of the TOM (Translocase of Outer Membrane) complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | TIM23 | YNR017W | Essential component of the TIM23 complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | TMS1 | YDR105C | Vacuolar membrane protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RTF1 | YGL244W | Subunit of RNAPII-associated chromatin remodeling Paf1 complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MCY1 | YGR012W | Putative cysteine synthase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YJR084W | YJR084W | Protein that forms a complex with Thp3p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YJR120W | YJR120W | Protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HXT2 | YMR011W | High-affinity glucose transporter of the major facilitator superfamily | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PGM2 | YMR105C | Phosphoglucomutase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SNO4 | YMR322C | Possible chaperone and cysteine protease | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PET20 | YPL159C | Mitochondrial protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YPR097W | YPR097W | Protein that contains a PX domain and binds phosphoinositides | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SGE1 | YPR198W | Plasma membrane multidrug transporter | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | OSM1 | YJR051W | Fumarate reductase, catalyzes the reduction of fumarate to succinate | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YUR1 | YJL139C | Mannosyltransferase involved in protein N-glycosylation | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | XKS1 | YGR194C | Xylulokinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PDX3 | YBR035C | Pyridoxine (pyridoxamine) phosphate oxidase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GPX1 | YKL026C | Phospholipid hydroperoxide glutathione peroxidase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PUT4 | YOR348C | Proline permease | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | LEU1 | YGL009C | Isopropylmalate isomerase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MAE1 | YKL029C | Mitochondrial malic enzyme | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GPP1 | YIL053W | Constitutively expressed DL-glycerol-3-phosphate phosphatase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TGL2 | YDR058C | Triacylglycerol lipase that is localized to the mitochondria | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SUR1 | YPL057C | Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TIM11 | YDR322C-A | Subunit e of mitochondrial F1F0-ATPase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PDC6 | YGR087C | Minor isoform of pyruvate decarboxylase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | QCR9 | YGR183C | Subunit 9 of ubiquinol cytochrome-c reductase (Complex III) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TKL1 | YPR074C | Transketolase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SCS7 | YMR272C | Sphingolipid alpha-hydroxylase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PHO84 | YML123C | High-affinity inorganic phosphate (Pi) transporter | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SCT1 | YBL011W | Glycerol 3-phosphate/dihydroxyacetone phosphate sn-1 acyltransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ELO2 | YCR034W | Fatty acid elongase, involved in sphingolipid biosynthesis | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | KCS1 | YDR017C | Inositol hexakisphosphate and inositol heptakisphosphate kinase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PXA1 | YPL147W | Subunit of heterodimeric peroxisomal ABC transport complex, with Pxa2p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NTH1 | YDR001C | Neutral trehalase, degrades trehalose | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MET10 | YFR030W | Subunit alpha of assimilatory sulfite reductase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | LAT1 | YNL071W | Dihydrolipoamide acetyltransferase component (E2) of the PDC | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPE1 | YJL121C | D-ribulose-5-phosphate 3-epimerase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TPS1 | YBR126C | Synthase subunit of trehalose-6-P synthase/phosphatase complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SOL4 | YGR248W | 6-phosphogluconolactonase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PRS4 | YBL068W | 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HOF1 | YMR032W | F-BAR protein that regulates actin cytoskeleton organization | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TIM18 | YOR297C | Component of the mitochondrial TIM22 complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YME1 | YPR024W | Catalytic subunit of i-AAA protease complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YOR1 | YGR281W | Plasma membrane ATP-binding cassette (ABC) transporter | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | REB1 | YBR049C | RNA polymerase I enhancer binding protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RPN5 | YDL147W | Subunit of the CSN and 26S proteasome lid complexes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ESF1 | YDR365C | Nucleolar protein involved in pre-rRNA processing | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MOB2 | YFL034C-B | Activator of Cbk1p kinase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | FAF1 | YIL019W | Protein required for pre-rRNA processing | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TIF34 | YMR146C | eIF3i subunit of the eukaryotic translation initiation factor 3 (eIF3) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TRS130 | YMR218C | Component of transport protein particle (TRAPP) complex II | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RPL3 | YOR063W | Ribosomal 60S subunit protein L3 | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MRS6 | YOR370C | Rab escort protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RPL5 | YPL131W | Ribosomal 60S subunit protein L5 | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TMA64 | YDR117C | Protein of unknown function that associates with ribosomes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MZM1 | YDR493W | Protein required for assembly of the cytochrome bc(1) complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ZNF1 | YFL052W | Zinc cluster transcription factor that regulates respiratory growth | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ROF1 | YHR177W | Putative transcription factor containing a WOPR domain | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YJL107C | YJL107C | Putative protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TMH11 | YJR085C | Mitochondrial protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TCB3 | YML072C | Cortical ER protein involved in ER-plasma membrane tethering | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YMR155W | YMR155W | Putative protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PHO91 | YNR013C | Low-affinity vacuolar phosphate transporter | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PRS5 | YOL061W | 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | DNL4 | YOR005C | DNA ligase required for nonhomologous end-joining (NHEJ) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TOM6 | YOR045W | Component of the TOM (translocase of outer membrane) complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YPL039W | YPL039W | Putative protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PCL8 | YPL219W | Cyclin | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | IPP1 | YBR011C | Cytoplasmic inorganic pyrophosphatase (PPase) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | POL30 | YBR088C | Proliferating cell nuclear antigen (PCNA) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TAF12 | YDR145W | Subunit (61/68 kDa) of TFIID and SAGA complexes | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GCD6 | YDR211W | Catalytic epsilon subunit of the translation initiation factor eIF2B | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PMA1 | YGL008C | Plasma membrane P2-type H+-ATPase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TFG2 | YGR005C | TFIIF (Transcription Factor II) middle subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ERG25 | YGR060W | C-4 methyl sterol oxidase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPP1 | YHR062C | Subunit of both RNase MRP and nuclear RNase P | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | QNS1 | YHR074W | Glutamine-dependent NAD(+) synthetase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RRP14 | YKL082C | Essential protein, constituent of 66S pre-ribosomal particles | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DRS1 | YLL008W | Nucleolar DEAD-box protein required for ribosome assembly and function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NSE5 | YML023C | Component of the SMC5-SMC6 complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RRN11 | YML043C | Component of the core factor (CF) rDNA transcription factor complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RRN9 | YMR270C | Protein involved in promoting high level transcription of rDNA | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DBP2 | YNL112W | ATP-dependent RNA helicase of the DEAD-box protein family | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPC31 | YNL151C | RNA polymerase III subunit C31 | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MTR10 | YOR160W | Nuclear import receptor | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MED4 | YOR174W | Subunit of the RNA polymerase II mediator complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | IDI1 | YPL117C | Isopentenyl diphosphate:dimethylallyl diphosphate isomerase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TFB2 | YPL122C | Subunit of TFIIH and nucleotide excision repair factor 3 complexes | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SRP72 | YPL210C | Core component of the signal recognition particle (SRP) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TFB4 | YPR056W | Subunit of TFIIH complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YAR066W | YAR066W | Putative GPI protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GDT1 | YBR187W | Calcium and manganese transporter with higher affinity for Ca2+ | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HSP30 | YCR021C | Negative regulator of the H(+)-ATPase Pma1p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TVS1 | YCR061W | Protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YDR034W-B | YDR034W-B | Predicted tail-anchored plasma membrane protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YDR061W | YDR061W | Protein with similarity to ABC transporter family members | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TFB5 | YDR079C-A | Component of RNA polymerase II general transcription factor TFIIH | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SWI5 | YDR146C | Transcription factor that recruits Mediator and Swi/Snf complexes | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YDR391C | YDR391C | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SPT3 | YDR392W | Subunit of the SAGA and SAGA-like transcriptional regulatory complexes | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HPT1 | YDR399W | Dimeric hypoxanthine-guanine phosphoribosyltransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YHR045W | YHR045W | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SMT1 | YJL147C | Translational repressor of the mitochondrial ATP6/8 mRNA | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CYC1 | YJR048W | Cytochrome c, isoform 1 | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | STE24 | YJR117W | Highly conserved zinc metalloprotease | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VBA5 | YKR105C | Plasma membrane protein of the Major Facilitator Superfamily (MFS) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RCF1 | YML030W | Cytochrome c oxidase subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SUB1 | YMR039C | Transcriptional regulator | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RIM9 | YMR063W | Plasma membrane protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | IMP1 | YMR150C | Catalytic subunit of mitochondrial inner membrane peptidase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GAS3 | YMR215W | Putative 1,3-beta-glucanosyltransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NGL2 | YMR285C | Protein involved in 5.8S rRNA processing | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HHT2 | YNL031C | Histone H3 | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PSD1 | YNL169C | Phosphatidylserine decarboxylase of the mitochondrial inner membrane | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RIM21 | YNL294C | pH sensor molecule, component of the RIM101 pathway | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | IFM1 | YOL023W | Mitochondrial translation initiation factor 2 | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MDM32 | YOR147W | Mitochondrial inner membrane protein with similarity to Mdm31p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | KTR6 | YPL053C | Probable mannosylphosphate transferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | COX16 | YJL003W | Mitochondrial inner membrane protein | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | ATP23 | YNR020C | Putative metalloprotease of the mitochondrial inner membrane | physical | 1 | 1 | 1 | Affinity Capture-MS |