| ECM16 | 
                 YMR128W  | 
                 Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP  | 
                 physical | 
                 9  | 
                 4  | 
                 6  | 
                 Two-hybrid, Affinity Capture-Western, Reconstituted Complex, Affinity Capture-MS, Affinity Capture-MS, Reconstituted Complex, Two-hybrid, Two-hybrid, Affinity Capture-MS  | 
            
            
                | MPP10 | 
                 YJR002W  | 
                 Component of the SSU processome and 90S preribosome  | 
                 physical | 
                 4  | 
                 2  | 
                 4  | 
                 Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS  | 
            
            
                | KRR1 | 
                 YCL059C  | 
                 Nucleolar protein required for rRNA synthesis and ribosomal assembly  | 
                 physical | 
                 4  | 
                 2  | 
                 3  | 
                 Affinity Capture-MS, Affinity Capture-MS, Two-hybrid, Two-hybrid  | 
            
            
                | RPS7A | 
                 YOR096W  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 4  | 
                 2  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS, Two-hybrid, Affinity Capture-MS  | 
            
            
                | UTP10 | 
                 YJL109C  | 
                 Nucleolar protein  | 
                 physical | 
                 3  | 
                 2  | 
                 3  | 
                 Affinity Capture-MS, Affinity Capture-MS, Two-hybrid  | 
            
            
                | IMP4 | 
                 YNL075W  | 
                 Component of the SSU processome  | 
                 physical | 
                 3  | 
                 2  | 
                 3  | 
                 Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS  | 
            
            
                | NOP58 | 
                 YOR310C  | 
                 Protein involved in producing mature rRNAs and snoRNAs  | 
                 physical | 
                 3  | 
                 1  | 
                 3  | 
                 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | NOC4 | 
                 YPR144C  | 
                 Nucleolar protein  | 
                 physical | 
                 3  | 
                 1  | 
                 3  | 
                 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | PNO1 | 
                 YOR145C  | 
                 Essential nucleolar protein required for pre-18S rRNA processing  | 
                 physical | 
                 3  | 
                 2  | 
                 2  | 
                 Two-hybrid, Two-hybrid, Affinity Capture-MS  | 
            
            
                | UTP22 | 
                 YGR090W  | 
                 Component of the small-subunit processome  | 
                 physical | 
                 3  | 
                 2  | 
                 2  | 
                 Two-hybrid, Affinity Capture-MS, Two-hybrid  | 
            
            
                | RPS1A | 
                 YLR441C  | 
                 Ribosomal protein of the small (40S) subunit  | 
                 physical | 
                 3  | 
                 2  | 
                 2  | 
                 Two-hybrid, Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | BUD23 | 
                 YCR047C  | 
                 Ribosome biogenesis factor  | 
                 genetic | 
                 3  | 
                 2  | 
                 2  | 
                 Synthetic Rescue, Phenotypic Suppression, Synthetic Rescue  | 
            
            
                | RPS22A | 
                 YJL190C  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 3  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | HAS1 | 
                 YMR290C  | 
                 ATP-dependent RNA helicase  | 
                 physical | 
                 2  | 
                 2  | 
                 2  | 
                 Affinity Capture-MS, Two-hybrid  | 
            
            
                | HCA4 | 
                 YJL033W  | 
                 DEAD box RNA helicase  | 
                 physical | 
                 2  | 
                 2  | 
                 2  | 
                 Affinity Capture-MS, Two-hybrid  | 
            
            
                | KRE33 | 
                 YNL132W  | 
                 Acetyltransferase required for biogenesis of small ribosomal subunit  | 
                 physical | 
                 2  | 
                 2  | 
                 2  | 
                 Affinity Capture-MS, Two-hybrid  | 
            
            
                | UTP6 | 
                 YDR449C  | 
                 Nucleolar protein  | 
                 physical | 
                 2  | 
                 2  | 
                 2  | 
                 Affinity Capture-MS, Two-hybrid  | 
            
            
                | SOF1 | 
                 YLL011W  | 
                 Protein required for biogenesis of 40S (small) ribosomal subunit  | 
                 physical | 
                 2  | 
                 2  | 
                 2  | 
                 PCA, Affinity Capture-MS  | 
            
            
                | DHR2 | 
                 YKL078W  | 
                 Predominantly nucleolar DEAH-box ATP-dependent RNA helicase  | 
                 physical | 
                 2  | 
                 2  | 
                 2  | 
                 Affinity Capture-MS, Two-hybrid  | 
            
            
                | SAS10 | 
                 YDL153C  | 
                 Subunit of U3-containing Small Subunit (SSU) processome complex  | 
                 physical | 
                 2  | 
                 2  | 
                 2  | 
                 Affinity Capture-MS, Two-hybrid  | 
            
            
                | RPF2 | 
                 YKR081C  | 
                 Essential protein involved in rRNA maturation and ribosomal assembly  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | PRP43 | 
                 YGL120C  | 
                 RNA helicase in the DEAH-box family  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | NOC2 | 
                 YOR206W  | 
                 Protein involved in ribosome biogenesis  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | MAK21 | 
                 YDR060W  | 
                 Constituent of 66S pre-ribosomal particles  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | RRP5 | 
                 YMR229C  | 
                 RNA binding protein involved in synthesis of 18S and 5.8S rRNAs  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | MTR4 | 
                 YJL050W  | 
                 RNA duplex-sensing translocase  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | CSL4 | 
                 YNL232W  | 
                 Exosome non-catalytic core component  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | RRP6 | 
                 YOR001W  | 
                 Nuclear exosome exonuclease component  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | NOP14 | 
                 YDL148C  | 
                 Nucleolar protein  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | UTP18 | 
                 YJL069C  | 
                 Small-subunit processome protein involved in pre-18S rRNA maturation  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | UTP4 | 
                 YDR324C  | 
                 Subunit of U3-containing 90S preribosome and SSU processome complexes  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | UTP21 | 
                 YLR409C  | 
                 Subunit of U3-containing 90S preribosome and SSU processome complexes  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | RPS13 | 
                 YDR064W  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | MPT5 | 
                 YGL178W  | 
                 mRNA-binding protein of the PUF family  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-RNA, Affinity Capture-RNA  | 
            
            
                | RPS14A | 
                 YCR031C  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | RPS12 | 
                 YOR369C  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | RPS19A | 
                 YOL121C  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 2  | 
                 1  | 
                 2  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | ENP1 | 
                 YBR247C  | 
                 Protein associated with U3 and U14 snoRNAs  | 
                 physical | 
                 2  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS, Affinity Capture-MS  | 
            
            
                | SFP1 | 
                 YLR403W  | 
                 Regulates transcription of ribosomal protein and biogenesis genes  | 
                 regulation | 
                 1  | 
                 1  | 
                 1  | 
                 DNA to cDNA expression microarray evidence  | 
            
            
                | MED4 | 
                 YOR174W  | 
                 Subunit of the RNA polymerase II mediator complex  | 
                 regulation | 
                 1  | 
                 1  | 
                 1  | 
                 chromatin immunoprecipitation-chip evidence  | 
            
            
                | WTM1 | 
                 YOR230W  | 
                 Transcriptional modulator  | 
                 regulation | 
                 1  | 
                 1  | 
                 1  | 
                 DNA to cDNA expression microarray evidence  | 
            
            
                | CDC73 | 
                 YLR418C  | 
                 Component of the Paf1p complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Synthetic Lethality  | 
            
            
                | DSN1 | 
                 YIR010W  | 
                 Essential component of the outer kinetochore MIND complex  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | CBF5 | 
                 YLR175W  | 
                 Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | CKA1 | 
                 YIL035C  | 
                 Alpha catalytic subunit of casein kinase 2 (CK2)  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Two-hybrid  | 
            
            
                | BFR2 | 
                 YDR299W  | 
                 Component of the SSU and 90S preribosomes  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | ESF1 | 
                 YDR365C  | 
                 Nucleolar protein involved in pre-rRNA processing  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | ENP2 | 
                 YGR145W  | 
                 Component of the SSU  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | ESA1 | 
                 YOR244W  | 
                 Catalytic subunit of the histone acetyltransferase complex (NuA4)  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Biochemical Activity  | 
            
            
                | BRX1 | 
                 YOL077C  | 
                 Nucleolar protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | DBP9 | 
                 YLR276C  | 
                 DEAD-box protein required for 27S rRNA processing  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | DRS1 | 
                 YLL008W  | 
                 Nucleolar DEAD-box protein required for ribosome assembly and function  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | EBP2 | 
                 YKL172W  | 
                 Required for 25S rRNA maturation and 60S ribosomal subunit assembly  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | ERB1 | 
                 YMR049C  | 
                 Constituent of 66S pre-ribosomal particles  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | HAS1 | 
                 YMR290C  | 
                 ATP-dependent RNA helicase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | MAK16 | 
                 YAL025C  | 
                 Essential nuclear protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NOG1 | 
                 YPL093W  | 
                 Putative GTPase  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NOP16 | 
                 YER002W  | 
                 Constituent of 66S pre-ribosomal particles  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NOP2 | 
                 YNL061W  | 
                 rRNA m5C methyltransferase  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NOP4 | 
                 YPL043W  | 
                 Nucleolar protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NSA1 | 
                 YGL111W  | 
                 Constituent of 66S pre-ribosomal particles  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPF1 | 
                 YHR088W  | 
                 Protein involved in assembly and export of the large ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL17A | 
                 YKL180W  | 
                 Ribosomal 60S subunit protein L17A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL30 | 
                 YGL030W  | 
                 Ribosomal 60S subunit protein L30  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RLP7 | 
                 YNL002C  | 
                 Nucleolar protein similar to large ribosomal subunit L7 proteins  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RRP1 | 
                 YDR087C  | 
                 Essential evolutionarily conserved nucleolar protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | SSF1 | 
                 YHR066W  | 
                 Constituent of 66S pre-ribosomal particles  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NOP9 | 
                 YJL010C  | 
                 Essential subunit of U3-containing 90S preribosome  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | POP1 | 
                 YNL221C  | 
                 Subunit of RNase MRP, nuclear RNase P and telomerase complexes  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NUG1 | 
                 YER006W  | 
                 GTPase that associates with nuclear 60S pre-ribosomes  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NAN1 | 
                 YPL126W  | 
                 U3 snoRNP protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | DIP2 | 
                 YLR129W  | 
                 Nucleolar protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | PWP2 | 
                 YCR057C  | 
                 Conserved 90S pre-ribosomal component  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | UTP13 | 
                 YLR222C  | 
                 Nucleolar protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | UTP13 | 
                 YLR222C  | 
                 Nucleolar protein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RRP7 | 
                 YCL031C  | 
                 Essential protein involved in rRNA processing and ribosome biogenesis  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | MRT4 | 
                 YKL009W  | 
                 Protein involved in mRNA turnover and ribosome assembly  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | MRT4 | 
                 YKL009W  | 
                 Protein involved in mRNA turnover and ribosome assembly  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | NOP15 | 
                 YNL110C  | 
                 Constituent of 66S pre-ribosomal particles  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | CIC1 | 
                 YHR052W  | 
                 Essential protein that interacts with proteasome components  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | DBP3 | 
                 YGL078C  | 
                 RNA-Dependent ATPase, member of DExD/H-box family  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NSR1 | 
                 YGR159C  | 
                 Nucleolin, nucleolar protein that binds nuclear localization sequences  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NHP2 | 
                 YDL208W  | 
                 Protein related to mammalian high mobility group (HMG) proteins  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | NOP56 | 
                 YLR197W  | 
                 Essential evolutionarily-conserved nucleolar protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | DBP7 | 
                 YKR024C  | 
                 Putative ATP-dependent RNA helicase of the DEAD-box family  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RRP5 | 
                 YMR229C  | 
                 RNA binding protein involved in synthesis of 18S and 5.8S rRNAs  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | PAT1 | 
                 YCR077C  | 
                 Deadenylation-dependent mRNA-decapping factor  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-RNA  | 
            
            
                | NOP1 | 
                 YDL014W  | 
                 Histone glutamine methyltransferase, modifies H2A at Q105 in nucleolus  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NOP1 | 
                 YDL014W  | 
                 Histone glutamine methyltransferase, modifies H2A at Q105 in nucleolus  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RRP9 | 
                 YPR137W  | 
                 Protein involved in pre-rRNA processing  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | DIS3 | 
                 YOL021C  | 
                 Exosome core complex catalytic subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | LRP1 | 
                 YHR081W  | 
                 Nuclear exosome-associated nucleic acid binding protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | LRP1 | 
                 YHR081W  | 
                 Nuclear exosome-associated nucleic acid binding protein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RRP4 | 
                 YHR069C  | 
                 Exosome non-catalytic core component  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RRP40 | 
                 YOL142W  | 
                 Exosome non-catalytic core component  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RRP43 | 
                 YCR035C  | 
                 Exosome non-catalytic core component  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RRP45 | 
                 YDR280W  | 
                 Exosome non-catalytic core component  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RRP42 | 
                 YDL111C  | 
                 Exosome non-catalytic core component  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RRP46 | 
                 YGR095C  | 
                 Exosome non-catalytic core component  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RRP6 | 
                 YOR001W  | 
                 Nuclear exosome exonuclease component  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RPC82 | 
                 YPR190C  | 
                 RNA polymerase III subunit C82  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPA135 | 
                 YPR010C  | 
                 RNA polymerase I second largest subunit A135  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL3 | 
                 YOR063W  | 
                 Ribosomal 60S subunit protein L3  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NOP12 | 
                 YOL041C  | 
                 Nucleolar protein involved in pre-25S rRNA processing  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | PWP1 | 
                 YLR196W  | 
                 Protein with WD-40 repeats involved in rRNA processing  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | ACT1 | 
                 YFL039C  | 
                 Actin, structural protein in cytoskeleton  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | SRP1 | 
                 YNL189W  | 
                 Karyopherin alpha homolog  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | CCR4 | 
                 YAL021C  | 
                 Component of the CCR4-NOT transcriptional complex  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-RNA  | 
            
            
                | ECM16 | 
                 YMR128W  | 
                 Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Synthetic Rescue  | 
            
            
                | NAB2 | 
                 YGL122C  | 
                 Nuclear polyadenylated RNA-binding protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-RNA  | 
            
            
                | PUF6 | 
                 YDR496C  | 
                 Pumilio-homology domain protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | BMS1 | 
                 YPL217C  | 
                 GTPase required for ribosomal subunit synthesis and rRNA processing  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RCL1 | 
                 YOL010W  | 
                 Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | URB1 | 
                 YKL014C  | 
                 Protein required for the normal accumulation of 25S and 5.8S rRNAs  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | ASC1 | 
                 YMR116C  | 
                 G-protein beta subunit and guanine dissociation inhibitor for Gpa2p  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | CDC11 | 
                 YJR076C  | 
                 Component of the septin ring that is required for cytokinesis  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | NOG2 | 
                 YNR053C  | 
                 Putative GTPase  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | EMG1 | 
                 YLR186W  | 
                 Methyltransferase for rRNA  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | EMG1 | 
                 YLR186W  | 
                 Methyltransferase for rRNA  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | GCN1 | 
                 YGL195W  | 
                 Positive regulator of the Gcn2p kinase activity  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | DHH1 | 
                 YDL160C  | 
                 Cytoplasmic DEAD-box helicase and mRNA decapping activator  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-RNA  | 
            
            
                | HTB2 | 
                 YBL002W  | 
                 Histone H2B  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | MRD1 | 
                 YPR112C  | 
                 Essential conserved small ribosomal subunit (40s) synthesis factor  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | IMP3 | 
                 YHR148W  | 
                 Component of the SSU processome  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | KRR1 | 
                 YCL059C  | 
                 Nucleolar protein required for rRNA synthesis and ribosomal assembly  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | MAK5 | 
                 YBR142W  | 
                 Essential nucleolar protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | HTA1 | 
                 YDR225W  | 
                 Histone H2A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | DAM1 | 
                 YGR113W  | 
                 Essential subunit of the Dam1 complex (aka DASH complex)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | BUD21 | 
                 YOR078W  | 
                 Component of small ribosomal subunit (SSU) processosome  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | BUD21 | 
                 YOR078W  | 
                 Component of small ribosomal subunit (SSU) processosome  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | DBP8 | 
                 YHR169W  | 
                 ATPase, putative RNA helicase of the DEAD-box family  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | HTA2 | 
                 YBL003C  | 
                 Histone H2A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NOP14 | 
                 YDL148C  | 
                 Nucleolar protein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | ESF2 | 
                 YNR054C  | 
                 Essential nucleolar protein involved in pre-18S rRNA processing  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL23A | 
                 YBL087C  | 
                 Ribosomal 60S subunit protein L23A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL2A | 
                 YFR031C-A  | 
                 Ribosomal 60S subunit protein L2A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | MTR3 | 
                 YGR158C  | 
                 Exosome non-catalytic core component  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RSA4 | 
                 YCR072C  | 
                 Ribosomal large subunit (60S) assembly factor  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NUP85 | 
                 YJR042W  | 
                 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RPP2B | 
                 YDR382W  | 
                 Ribosomal protein P2 beta  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | SKI6 | 
                 YGR195W  | 
                 Exosome non-catalytic core component  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | CCT6 | 
                 YDR188W  | 
                 Subunit of the cytosolic chaperonin Cct ring complex  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | SBP1 | 
                 YHL034C  | 
                 Protein that binds eIF4G and has a role in repression of translation  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-RNA  | 
            
            
                | DRS2 | 
                 YAL026C  | 
                 Trans-golgi network aminophospholipid translocase (flippase)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | DIM1 | 
                 YPL266W  | 
                 Essential 18S rRNA dimethylase (dimethyladenosine transferase)  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | PNO1 | 
                 YOR145C  | 
                 Essential nucleolar protein required for pre-18S rRNA processing  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Synthetic Lethality  | 
            
            
                | RRP12 | 
                 YPL012W  | 
                 Protein required for export of the ribosomal subunits  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | ROK1 | 
                 YGL171W  | 
                 RNA-dependent ATPase  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | CMS1 | 
                 YLR003C  | 
                 Putative subunit of the 90S preribosome processome complex  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | PUF3 | 
                 YLL013C  | 
                 Protein of the mitochondrial outer surface  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-RNA  | 
            
            
                | NOB1 | 
                 YOR056C  | 
                 Protein involved in proteasomal and 40S ribosomal subunit biogenesis  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | TRM112 | 
                 YNR046W  | 
                 Protein involved in methylation of tRNA, rRNA, and translation factors  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | TRM112 | 
                 YNR046W  | 
                 Protein involved in methylation of tRNA, rRNA, and translation factors  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Synthetic Rescue  | 
            
            
                | ISA2 | 
                 YPR067W  | 
                 Protein required for maturation of mitochondrial [4Fe-4S] proteins  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | HTB1 | 
                 YDR224C  | 
                 Histone H2B  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NOP6 | 
                 YDL213C  | 
                 rRNA-binding protein required for 40S ribosomal subunit biogenesis  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NOP6 | 
                 YDL213C  | 
                 rRNA-binding protein required for 40S ribosomal subunit biogenesis  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | UTP11 | 
                 YKL099C  | 
                 Subunit of U3-containing Small Subunit (SSU) processome complex  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | UTP5 | 
                 YDR398W  | 
                 Subunit of U3-containing Small Subunit (SSU) processome complex  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | UTP5 | 
                 YDR398W  | 
                 Subunit of U3-containing Small Subunit (SSU) processome complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | UTP6 | 
                 YDR449C  | 
                 Nucleolar protein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | UTP20 | 
                 YBL004W  | 
                 Component of the small-subunit (SSU) processome  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | XRN1 | 
                 YGL173C  | 
                 Evolutionarily-conserved 5'-3' exonuclease  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | UTP8 | 
                 YGR128C  | 
                 Nucleolar protein required for export of tRNAs from the nucleus  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | UTP30 | 
                 YKR060W  | 
                 Subunit of U3-containing 90S preribosome complex  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | UTP30 | 
                 YKR060W  | 
                 Subunit of U3-containing 90S preribosome complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | YTM1 | 
                 YOR272W  | 
                 Ribosomal assembly factor and 66S pre-ribosomal particle constituent  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | UTP25 | 
                 YIL091C  | 
                 Nucleolar protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | UTP14 | 
                 YML093W  | 
                 Subunit of U3-containing Small Subunit (SSU) processome complex  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | UTP15 | 
                 YMR093W  | 
                 Nucleolar protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | UTP15 | 
                 YMR093W  | 
                 Nucleolar protein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | UTP9 | 
                 YHR196W  | 
                 Nucleolar protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | UTP9 | 
                 YHR196W  | 
                 Nucleolar protein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | UTP7 | 
                 YER082C  | 
                 Nucleolar protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | YDL114W | 
                 YDL114W  | 
                 Putative short-chain dehydrogenase/reductase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | YHR045W | 
                 YHR045W  | 
                 Putative protein of unknown function  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | VPS53 | 
                 YJL029C  | 
                 Component of the GARP (Golgi-associated retrograde protein) complex  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | YNL140C | 
                 YNL140C  | 
                 Protein of unknown function  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | YPL068C | 
                 YPL068C  | 
                 Protein of unknown function  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | LCP5 | 
                 YER127W  | 
                 Essential protein involved in maturation of 18S rRNA  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | SGS1 | 
                 YMR190C  | 
                 RecQ family nucleolar DNA helicase  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | SGS1 | 
                 YMR190C  | 
                 RecQ family nucleolar DNA helicase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Synthetic Lethality  | 
            
            
                | SGD1 | 
                 YLR336C  | 
                 Essential nuclear protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | MAK11 | 
                 YKL021C  | 
                 Protein involved in an early step of 60S ribosomal subunit biogenesis  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPP0 | 
                 YLR340W  | 
                 Conserved ribosomal protein P0 of the ribosomal stalk  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | KRI1 | 
                 YNL308C  | 
                 Essential nucleolar protein required for 40S ribosome biogenesis  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | MRE11 | 
                 YMR224C  | 
                 Nuclease subunit of the MRX complex with Rad50p and Xrs2p  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Synthetic Lethality  | 
            
            
                | FAL1 | 
                 YDR021W  | 
                 Nucleolar protein required for maturation of 18S rRNA  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | SOF1 | 
                 YLL011W  | 
                 Protein required for biogenesis of 40S (small) ribosomal subunit  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | FCF1 | 
                 YDR339C  | 
                 PINc domain endonuclease  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | FCF1 | 
                 YDR339C  | 
                 PINc domain endonuclease  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RRP3 | 
                 YHR065C  | 
                 Protein involved in rRNA processing  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RRP3 | 
                 YHR065C  | 
                 Protein involved in rRNA processing  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | MMS22 | 
                 YLR320W  | 
                 Subunit of E3 ubiquitin ligase complex involved in replication repair  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL5 | 
                 YPL131W  | 
                 Ribosomal 60S subunit protein L5  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | TRS85 | 
                 YDR108W  | 
                 Component of transport protein particle (TRAPP) complex III  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | MOB2 | 
                 YFL034C-B  | 
                 Activator of Cbk1p kinase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | BAS1 | 
                 YKR099W  | 
                 Myb-related transcription factor  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | APC11 | 
                 YDL008W  | 
                 Catalytic core subunit, Anaphase-Promoting Complex/Cyclosome (APC/C)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | CDC27 | 
                 YBL084C  | 
                 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RPL4A | 
                 YBR031W  | 
                 Ribosomal 60S subunit protein L4A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RLP24 | 
                 YLR009W  | 
                 Essential protein required for ribosomal large subunit biogenesis  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS4A | 
                 YJR145C  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS5 | 
                 YJR123W  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | BRF1 | 
                 YGR246C  | 
                 TFIIIB B-related factor  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | SAC3 | 
                 YDR159W  | 
                 mRNA export factor  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RPP1 | 
                 YHR062C  | 
                 Subunit of both RNase MRP and nuclear RNase P  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS8A | 
                 YBL072C  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS17A | 
                 YML024W  | 
                 Ribosomal protein 51 (rp51) of the small (40s) subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS17B | 
                 YDR447C  | 
                 Ribosomal protein 51 (rp51) of the small (40s) subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS1B | 
                 YML063W  | 
                 Ribosomal protein of the small (40S) subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS9B | 
                 YBR189W  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL22A | 
                 YLR061W  | 
                 Ribosomal 60S subunit protein L22A  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | CSG2 | 
                 YBR036C  | 
                 Endoplasmic reticulum membrane protein  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | HMT1 | 
                 YBR034C  | 
                 Nuclear SAM-dependent mono- and asymmetric methyltransferase  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | SNM1 | 
                 YDR478W  | 
                 Ribonuclease MRP complex subunit  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RPL1A | 
                 YPL220W  | 
                 Ribosomal 60S subunit protein L1A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL25 | 
                 YOL127W  | 
                 Ribosomal 60S subunit protein L25  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL31A | 
                 YDL075W  | 
                 Ribosomal 60S subunit protein L31A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | SUR1 | 
                 YPL057C  | 
                 Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | TOM1 | 
                 YDR457W  | 
                 E3 ubiquitin ligase of the hect-domain class  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS2 | 
                 YGL123W  | 
                 Protein component of the small (40S) subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS3 | 
                 YNL178W  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-Western  | 
            
            
                | DOM34 | 
                 YNL001W  | 
                 Protein that facilitates ribosomal subunit dissociation  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | DBP6 | 
                 YNR038W  | 
                 Essential protein involved in ribosome biogenesis  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | FAF1 | 
                 YIL019W  | 
                 Protein required for pre-rRNA processing  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | STB5 | 
                 YHR178W  | 
                 Transcription factor  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | NOP8 | 
                 YOL144W  | 
                 Nucleolar protein required for 60S ribosomal subunit biogenesis  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS20 | 
                 YHL015W  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RRS1 | 
                 YOR294W  | 
                 Essential protein that binds ribosomal protein L11  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL13A | 
                 YDL082W  | 
                 Ribosomal 60S subunit protein L13A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | SNU13 | 
                 YEL026W  | 
                 RNA binding protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL7A | 
                 YGL076C  | 
                 Ribosomal 60S subunit protein L7A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL15A | 
                 YLR029C  | 
                 Ribosomal 60S subunit protein L15A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS0A | 
                 YGR214W  | 
                 Ribosomal 40S subunit protein S0A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS18A | 
                 YDR450W  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | HBS1 | 
                 YKR084C  | 
                 GTPase with similarity to translation release factors  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RPL36B | 
                 YPL249C-A  | 
                 Ribosomal 60S subunit protein L36B  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | BUD23 | 
                 YCR047C  | 
                 Ribosome biogenesis factor  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-Western  | 
            
            
                | AVT1 | 
                 YJR001W  | 
                 Vacuolar transporter  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | BUL2 | 
                 YML111W  | 
                 Alpha-arrestin, component of the Rsp5p E3-ubiquitin ligase complex  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | FCF2 | 
                 YLR051C  | 
                 Nucleolar protein involved in the early steps of 35S rRNA processing  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | PUF4 | 
                 YGL014W  | 
                 Member of the PUF protein family  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-RNA  | 
            
            
                | PDC2 | 
                 YDR081C  | 
                 Transcription factor for thiamine-regulated genes  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | CSR1 | 
                 YLR380W  | 
                 Phosphatidylinositol transfer protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | URB2 | 
                 YJR041C  | 
                 Protein required for normal metabolism of the rRNA primary transcript  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | ROT1 | 
                 YMR200W  | 
                 Molecular chaperone involved in protein folding in ER  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | GIS2 | 
                 YNL255C  | 
                 Translational activator for mRNAs with internal ribosome entry sites  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-RNA  | 
            
            
                | RPS6A | 
                 YPL090C  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS9A | 
                 YPL081W  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | PHB2 | 
                 YGR231C  | 
                 Subunit of the prohibitin complex (Phb1p-Phb2p)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Positive Genetic  | 
            
            
                | RPL20A | 
                 YMR242C  | 
                 Ribosomal 60S subunit protein L20A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS16A | 
                 YMR143W  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL8B | 
                 YLL045C  | 
                 Ribosomal 60S subunit protein L8A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS7B | 
                 YNL096C  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS10A | 
                 YOR293W  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL6B | 
                 YLR448W  | 
                 Ribosomal 60S subunit protein L6B  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL8A | 
                 YHL033C  | 
                 Ribosomal 60S subunit protein L8A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | NUP192 | 
                 YJL039C  | 
                 Essential subunit of inner ring of nuclear pore complex (NPC)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RSA3 | 
                 YLR221C  | 
                 Protein with a likely role in ribosomal maturation  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPP2A | 
                 YOL039W  | 
                 Ribosomal protein P2 alpha  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL26A | 
                 YLR344W  | 
                 Ribosomal 60S subunit protein L26A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL26B | 
                 YGR034W  | 
                 Ribosomal 60S subunit protein L26B  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | PUF2 | 
                 YPR042C  | 
                 PUF family mRNA-binding protein  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-RNA  | 
            
            
                | TES1 | 
                 YJR019C  | 
                 Peroxisomal acyl-CoA thioesterase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RPS18B | 
                 YML026C  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS27A | 
                 YKL156W  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPL14A | 
                 YKL006W  | 
                 Ribosomal 60S subunit protein L14A  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | EFG1 | 
                 YGR271C-A  | 
                 Ribosome biogenesis factor required for maturation of 18S rRNA  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | CHO2 | 
                 YGR157W  | 
                 Phosphatidylethanolamine methyltransferase (PEMT)  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | PEX34 | 
                 YCL056C  | 
                 Protein that regulates peroxisome populations  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RPL12B | 
                 YDR418W  | 
                 Ribosomal 60S subunit protein L12B  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | RPS6B | 
                 YBR181C  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | MRM2 | 
                 YGL136C  | 
                 Mitochondrial 2' O-ribose methyltransferase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | MDL2 | 
                 YPL270W  | 
                 Mitochondrial inner membrane half-type ABC transporter  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | CDC1 | 
                 YDR182W  | 
                 Putative mannose-ethanolamine phosphate phosphodiesterase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | RPS15 | 
                 YOL040C  | 
                 Protein component of the small (40S) ribosomal subunit  | 
                 physical | 
                 1  | 
                 1  | 
                 1  | 
                 Affinity Capture-MS  | 
            
            
                | BCD1 | 
                 YHR040W  | 
                 Essential protein required for the accumulation of box C/D snoRNA  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | TDA11 | 
                 YHR159W  | 
                 Putative protein of unknown function  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  | 
            
            
                | CTM1 | 
                 YHR109W  | 
                 Cytochrome c lysine methyltransferase  | 
                 genetic | 
                 1  | 
                 1  | 
                 1  | 
                 Negative Genetic  |