SHE3 |
YBR130C |
Protein adaptor between Myo4p and the She2p-mRNA complex |
physical |
21 |
6 |
17 |
Affinity Capture-MS, Two-hybrid, Two-hybrid, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, PCA, Affinity Capture-Western, Two-hybrid, Affinity Capture-Western, Two-hybrid, Affinity Capture-Western, Reconstituted Complex, Co-crystal Structure, Co-crystal Structure, Reconstituted Complex, Reconstituted Complex, Co-crystal Structure, Reconstituted Complex |
ASH1 |
YKL185W |
Component of the Rpd3L histone deacetylase complex |
physical |
18 |
2 |
17 |
Affinity Capture-RNA, Protein-RNA, Affinity Capture-RNA, Affinity Capture-RNA, Protein-RNA, Protein-RNA, Protein-RNA, Affinity Capture-RNA, Protein-RNA, Affinity Capture-RNA, Protein-RNA, Protein-RNA, Affinity Capture-RNA, Affinity Capture-RNA, Protein-RNA, Protein-RNA, Protein-RNA, Protein-RNA |
MYO4 |
YAL029C |
Type V myosin motor involved in actin-based transport of cargos |
physical |
13 |
6 |
10 |
Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, PCA, Affinity Capture-Western, Affinity Capture-MS, Co-fractionation, Reconstituted Complex, Co-crystal Structure, Reconstituted Complex, Reconstituted Complex |
SHE2 |
YKL130C |
RNA-binding protein that binds specific mRNAs and interacts with She3p |
physical |
6 |
4 |
4 |
Reconstituted Complex, Affinity Capture-MS, Co-crystal Structure, Co-crystal Structure, Reconstituted Complex, Affinity Capture-Western |
LOC1 |
YFR001W |
Nucleolar protein involved in the asymmetric localization of ASH1 mRNA |
physical |
6 |
3 |
3 |
Affinity Capture-Western, Co-localization, Reconstituted Complex, Reconstituted Complex, Affinity Capture-Western, Reconstituted Complex |
PUF6 |
YDR496C |
Pumilio-homology domain protein |
physical |
5 |
3 |
3 |
Affinity Capture-Western, Affinity Capture-Western, Co-localization, Reconstituted Complex, Affinity Capture-Western |
SRP1 |
YNL189W |
Karyopherin alpha homolog |
physical |
4 |
2 |
2 |
Two-hybrid, Two-hybrid, Reconstituted Complex, Reconstituted Complex |
SEC61 |
YLR378C |
Conserved ER protein translocation channel |
physical |
3 |
3 |
2 |
Co-fractionation, Reconstituted Complex, Affinity Capture-MS |
IST2 |
YBR086C |
Cortical ER protein involved in ER-plasma membrane (PM) tethering |
physical |
2 |
2 |
2 |
Protein-RNA, Affinity Capture-RNA |
UBX6 |
YJL048C |
UBX (ubiquitin regulatory X) domain-containing protein |
physical |
2 |
1 |
2 |
Two-hybrid, Two-hybrid |
NCE101 |
YJL205C |
Protein of unknown function |
genetic |
2 |
1 |
2 |
Negative Genetic, Negative Genetic |
MUD1 |
YBR119W |
U1 snRNP A protein |
physical |
2 |
2 |
1 |
Affinity Capture-Western, Affinity Capture-MS |
RPO21 |
YDL140C |
RNA polymerase II largest subunit B220 |
physical |
2 |
1 |
1 |
Affinity Capture-Western, Affinity Capture-Western |
XBP1 |
YIL101C |
Transcriptional repressor |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
STP1 |
YDR463W |
Transcription factor |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
TFC7 |
YOR110W |
RNA pol III transcription initiation factor complex (TFIIIC) subunit |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
DED81 |
YHR019C |
Cytosolic asparaginyl-tRNA synthetase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
POP4 |
YBR257W |
Subunit of both RNase MRP and nuclear RNase P |
genetic |
1 |
1 |
1 |
Negative Genetic |
CDC42 |
YLR229C |
Small rho-like GTPase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
MAK21 |
YDR060W |
Constituent of 66S pre-ribosomal particles |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
PWP1 |
YLR196W |
Protein with WD-40 repeats involved in rRNA processing |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
ACT1 |
YFL039C |
Actin, structural protein in cytoskeleton |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
PRE5 |
YMR314W |
Alpha 6 subunit of the 20S proteasome |
physical |
1 |
1 |
1 |
Two-hybrid |
CCR4 |
YAL021C |
Component of the CCR4-NOT transcriptional complex |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
BMS1 |
YPL217C |
GTPase required for ribosomal subunit synthesis and rRNA processing |
genetic |
1 |
1 |
1 |
Negative Genetic |
BNI1 |
YNL271C |
Formin |
physical |
1 |
1 |
1 |
PCA |
EXO84 |
YBR102C |
Exocyst subunit with dual roles in exocytosis and spliceosome assembly |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
FAP1 |
YNL023C |
Protein that binds to Fpr1p |
physical |
1 |
1 |
1 |
Two-hybrid |
DHH1 |
YDL160C |
Cytoplasmic DEAD-box helicase and mRNA decapping activator |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
LCB1 |
YMR296C |
Component of serine palmitoyltransferase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
MCM5 |
YLR274W |
Component of the Mcm2-7 hexameric helicase complex |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
CMR1 |
YDL156W |
Nuclear protein with role in transcription, protein quality control |
genetic |
1 |
1 |
1 |
Negative Genetic |
CMD1 |
YBR109C |
Calmodulin |
genetic |
1 |
1 |
1 |
Negative Genetic |
MYO2 |
YOR326W |
Type V myosin motor involved in actin-based transport of cargos |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
PAC10 |
YGR078C |
Part of the heteromeric co-chaperone GimC/prefoldin complex |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
ADE3 |
YGR204W |
Cytoplasmic trifunctional enzyme |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
SLM1 |
YIL105C |
Phosphoinositide PI4,5P(2) binding protein, forms a complex with Slm2p |
physical |
1 |
1 |
1 |
Two-hybrid |
SRO7 |
YPR032W |
Effector of Rab GTPase Sec4p |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
SRO77 |
YBL106C |
Protein with roles in exocytosis and cation homeostasis |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
SRL1 |
YOR247W |
Mannoprotein that exhibits a tight association with the cell wall |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
YSP2 |
YDR326C |
Sterol-binding protein |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
WSC2 |
YNL283C |
Sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
SUI1 |
YNL244C |
Translation initiation factor eIF1 |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
TCB2 |
YNL087W |
ER protein involved in ER-plasma membrane tethering |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
TAM41 |
YGR046W |
Mitochondrial phosphatidate cytidylyltransferase (CDP-DAG synthase) |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
TKL1 |
YPR074C |
Transketolase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
YEF3 |
YLR249W |
Translation elongation factor 3 |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
SUN4 |
YNL066W |
Cell wall protein related to glucanases localized in birth scars |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
TEF4 |
YKL081W |
Gamma subunit of translational elongation factor eEF1B |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
YLR179C |
YLR179C |
Protein of unknown function with similarity to Tfs1p |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
STM1 |
YLR150W |
Protein required for optimal translation under nutrient stress |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
SLF1 |
YDR515W |
RNA binding protein that associates with polysomes |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
SRO9 |
YCL037C |
Cytoplasmic RNA-binding protein |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
STE7 |
YDL159W |
Signal transducing MAP kinase kinase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
SUC2 |
YIL162W |
Invertase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
VAM6 |
YDL077C |
Guanine nucleotide exchange factor for the GTPase Gtr1p |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
TIF4631 |
YGR162W |
Translation initiation factor eIF4G and scaffold protein |
genetic |
1 |
1 |
1 |
Negative Genetic |
YSR3 |
YKR053C |
Dihydrosphingosine 1-phosphate phosphatase |
genetic |
1 |
1 |
1 |
Negative Genetic |
TUB2 |
YFL037W |
Beta-tubulin |
genetic |
1 |
1 |
1 |
Negative Genetic |
YIL102C |
YIL102C |
Putative protein of unknown function |
genetic |
1 |
1 |
1 |
Negative Genetic |
TGS1 |
YPL157W |
Trimethyl guanosine synthase, conserved nucleolar methyl transferase |
genetic |
1 |
1 |
1 |
Negative Genetic |
SEC3 |
YER008C |
Subunit of the exocyst complex |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
PUF3 |
YLL013C |
Protein of the mitochondrial outer surface |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
HYP2 |
YEL034W |
Translation elongation factor eIF-5A |
genetic |
1 |
1 |
1 |
Positive Genetic |
GPP1 |
YIL053W |
Constitutively expressed DL-glycerol-3-phosphate phosphatase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
RHO5 |
YNL180C |
Non-essential small GTPase of the Rho/Rac family of Ras-like proteins |
genetic |
1 |
1 |
1 |
Synthetic Rescue |
ILV5 |
YLR355C |
Acetohydroxyacid reductoisomerase and mtDNA binding protein |
genetic |
1 |
1 |
1 |
Negative Genetic |
MDM30 |
YLR368W |
F-box component of an SCF ubiquitin protein ligase complex |
genetic |
1 |
1 |
1 |
Negative Genetic |
IMD4 |
YML056C |
Inosine monophosphate dehydrogenase |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
RAD6 |
YGL058W |
Ubiquitin-conjugating enzyme (E2) |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
NTF2 |
YER009W |
Nuclear envelope protein |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
FRS2 |
YFL022C |
Alpha subunit of cytoplasmic phenylalanyl-tRNA synthetase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
INA1 |
YLR413W |
Protein of unknown function |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
SEC4 |
YFL005W |
Rab family GTPase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
CLB2 |
YPR119W |
B-type cyclin involved in cell cycle progression |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
RTT103 |
YDR289C |
Protein involved in transcription termination by RNA polymerase II |
genetic |
1 |
1 |
1 |
Negative Genetic |
FUS3 |
YBL016W |
Mitogen-activated serine/threonine protein kinase involved in mating |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
HOM2 |
YDR158W |
Aspartic beta semi-aldehyde dehydrogenase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
CYS3 |
YAL012W |
Cystathionine gamma-lyase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
KKQ8 |
YKL168C |
Putative serine/threonine protein kinase with unknown cellular role |
physical |
1 |
1 |
1 |
Reconstituted Complex |
ATP20 |
YPR020W |
Subunit g of the mitochondrial F1F0 ATP synthase |
physical |
1 |
1 |
1 |
Two-hybrid |
LPP1 |
YDR503C |
Lipid phosphate phosphatase |
physical |
1 |
1 |
1 |
Two-hybrid |
NDL1 |
YLR254C |
Homolog of nuclear distribution factor NudE |
genetic |
1 |
1 |
1 |
Positive Genetic |
MMR1 |
YLR190W |
Phosphorylated protein of the mitochondrial outer membrane |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
IKS1 |
YJL057C |
Protein kinase of unknown cellular role |
physical |
1 |
1 |
1 |
Reconstituted Complex |
IKS1 |
YJL057C |
Protein kinase of unknown cellular role |
genetic |
1 |
1 |
1 |
Negative Genetic |
RPS11B |
YBR048W |
Protein component of the small (40S) ribosomal subunit |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
KAR3 |
YPR141C |
Minus-end-directed microtubule motor |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
SEC1 |
YDR164C |
Sm-like protein involved in docking and fusion of exocytic vesicles |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
BUD8 |
YLR353W |
Protein involved in bud-site selection |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
MPT5 |
YGL178W |
mRNA-binding protein of the PUF family |
genetic |
1 |
1 |
1 |
Negative Genetic |
MID2 |
YLR332W |
O-glycosylated plasma membrane protein |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
PMT2 |
YAL023C |
Protein O-mannosyltransferase of the ER membrane |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
AUS1 |
YOR011W |
Plasma membrane sterol transporter of the ATP-binding cassette family |
physical |
1 |
1 |
1 |
Protein-peptide |
CPS1 |
YJL172W |
Vacuolar carboxypeptidase S |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
ERG2 |
YMR202W |
C-8 sterol isomerase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
FRE3 |
YOR381W |
Ferric reductase |
genetic |
1 |
1 |
1 |
Negative Genetic |
ACB1 |
YGR037C |
Acyl-CoA-binding protein |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
PSD2 |
YGR170W |
Phosphatidylserine decarboxylase of the Golgi and vacuolar membranes |
genetic |
1 |
1 |
1 |
Negative Genetic |
RSM24 |
YDR175C |
Mitochondrial ribosomal protein of the small subunit |
genetic |
1 |
1 |
1 |
Negative Genetic |
IRC8 |
YJL051W |
Bud tip localized protein of unknown function |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
SBA1 |
YKL117W |
Co-chaperone that binds and regulates Hsp90 family chaperones |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
FRE8 |
YLR047C |
Protein with sequence similarity to iron/copper reductases |
genetic |
1 |
1 |
1 |
Negative Genetic |
PTK2 |
YJR059W |
Serine/threonine protein kinase |
genetic |
1 |
1 |
1 |
Negative Genetic |
PUF2 |
YPR042C |
PUF family mRNA-binding protein |
genetic |
1 |
1 |
1 |
Phenotypic Enhancement |
RHO3 |
YIL118W |
Non-essential small GTPase of the Rho/Rac family of Ras-like proteins |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
NCB2 |
YDR397C |
Subunit of a heterodimeric NC2 transcription regulator complex |
genetic |
1 |
1 |
1 |
Positive Genetic |
PRY2 |
YKR013W |
Sterol binding protein involved in the export of acetylated sterols |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
AIM34 |
YMR003W |
Protein of unknown function |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
SCY1 |
YGL083W |
Putative kinase |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
CIS3 |
YJL158C |
Mannose-containing glycoprotein constituent of the cell wall |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
PRY1 |
YJL079C |
Lipid binding protein |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
MIM1 |
YOL026C |
Mitochondrial protein required for outer membrane protein import |
physical |
1 |
1 |
1 |
Affinity Capture-Western |
HLJ1 |
YMR161W |
Co-chaperone for Hsp40p |
genetic |
1 |
1 |
1 |
Negative Genetic |
MRN1 |
YPL184C |
RNA-binding protein that may be involved in translational regulation |
genetic |
1 |
1 |
1 |
Positive Genetic |
MSC1 |
YML128C |
Protein of unknown function |
genetic |
1 |
1 |
1 |
Negative Genetic |
RML2 |
YEL050C |
Mitochondrial ribosomal protein of the large subunit (L2) |
genetic |
1 |
1 |
1 |
Negative Genetic |