| ARG82 | YDR173C | Inositol polyphosphate multikinase (IPMK) | physical | 5 | 2 | 3 | Two-hybrid, Two-hybrid, Two-hybrid, Reconstituted Complex, Two-hybrid | 
            
                | ARG81 | YML099C | Zinc finger transcription factor involved in arginine-responsive genes | physical | 5 | 2 | 3 | Two-hybrid, Two-hybrid, Two-hybrid, Two-hybrid, Affinity Capture-Western | 
            
                | MCM1 | YMR043W | Transcription factor | physical | 4 | 2 | 3 | Two-hybrid, Two-hybrid, Two-hybrid, Affinity Capture-Western | 
            
                | ARG56 | YER069W | Acetylglutamate kinase and N-acetyl-gamma-glutamyl-phosphate reductase | regulation | 2 | 2 | 2 | chromatin immunoprecipitation-chip evidence, DNA to cDNA expression microarray evidence | 
            
                | ARG8 | YOL140W | Acetylornithine aminotransferase | regulation | 2 | 2 | 2 | chromatin immunoprecipitation-chip evidence, DNA to cDNA expression microarray evidence | 
            
                | ARG3 | YJL088W | Ornithine carbamoyltransferase | regulation | 2 | 2 | 2 | chromatin immunoprecipitation-chip evidence, DNA to cDNA expression microarray evidence | 
            
                | FKH1 | YIL131C | Forkhead family transcription factor | regulation | 2 | 1 | 2 | chromatin immunoprecipitation-chip evidence, chromatin immunoprecipitation-chip evidence | 
            
                | IXR1 | YKL032C | Transcriptional repressor that regulates hypoxic genes during normoxia | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | FKH2 | YNL068C | Forkhead family transcription factor | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | XBP1 | YIL101C | Transcriptional repressor | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | SPT7 | YBR081C | Subunit of the SAGA transcriptional regulatory complex | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | SOL4 | YGR248W | 6-phosphogluconolactonase | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | CAR1 | YPL111W | Arginase, catabolizes arginine to ornithine and urea | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | ARG1 | YOL058W | Arginosuccinate synthetase | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | YGP1 | YNL160W | Cell wall-related secretory glycoprotein | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | EIS1 | YMR031C | Component of the eisosome required for proper eisosome assembly | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | NET1 | YJL076W | Core subunit of the RENT complex | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | YOR302W | YOR302W | CPA1 uORF | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | CIP1 | YPL014W | Cyclin-dependent kinase inhibitor | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | PPN1 | YDR452W | Dual endo- and exopolyphosphatase with a role in phosphate metabolism | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | HOF1 | YMR032W | F-BAR protein that regulates actin cytoskeleton organization | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | GLK1 | YCL040W | Glucokinase | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | GAD1 | YMR250W | Glutamate decarboxylase | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | SPI1 | YER150W | GPI-anchored cell wall protein involved in weak acid resistance | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | YHP1 | YDR451C | Homeobox transcriptional repressor | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | CUP9 | YPL177C | Homeodomain-containing transcriptional repressor | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | TSL1 | YML100W | Large subunit of trehalose 6-phosphate synthase/phosphatase complex | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | CAR2 | YLR438W | L-ornithine transaminase (OTAse) | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | MRPL23 | YOR150W | Mitochondrial ribosomal protein of the large subunit | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | HSP30 | YCR021C | Negative regulator of the H(+)-ATPase Pma1p | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | CAJ1 | YER048C | Nuclear type II J heat shock protein of the E. coli dnaJ family | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | TPO4 | YOR273C | Polyamine transporter of the major facilitator superfamily | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | TPO2 | YGR138C | Polyamine transporter of the major facilitator superfamily | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | STP4 | YDL048C | Protein containing a Kruppel-type zinc-finger domain | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | YLR297W | YLR297W | Protein of unknown function | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | YRO2 | YBR054W | Protein with a putative role in response to acid stress | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | NRE1 | YIR035C | Putative cytoplasmic short-chain dehydrogenase/reductase | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | NOG2 | YNR053C | Putative GTPase | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | YKL097C | YKL097C | Putative protein of unknown function | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | YNL050C | YNL050C | Putative protein of unknown function | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | RIE1 | YGR250C | RNA binding protein and negative regulator of START | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | CPA1 | YOR303W | Small subunit of carbamoyl phosphate synthetase | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | YEH1 | YLL012W | Steryl ester hydrolase | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | EPL1 | YFL024C | Subunit of NuA4, an essential histone H4/H2A acetyltransferase complex | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | GPI17 | YDR434W | Transmembrane protein | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | BUD27 | YFL023W | Unconventional prefoldin protein involved in translation initiation | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | UPC2 | YDR213W | Sterol regulatory element binding protein | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | UME6 | YDR207C | Rpd3L histone deacetylase complex subunit | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | MPT5 | YGL178W | mRNA-binding protein of the PUF family | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | CCR4 | YAL021C | Component of the CCR4-NOT transcriptional complex | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | GCN5 | YGR252W | Catalytic subunit of ADA and SAGA histone acetyltransferase complexes | genetic | 1 | 1 | 1 | Phenotypic Enhancement | 
            
                | HSP82 | YPL240C | Hsp90 chaperone | genetic | 1 | 1 | 1 | Synthetic Growth Defect | 
            
                | HSC82 | YMR186W | Cytoplasmic chaperone of the Hsp90 family | genetic | 1 | 1 | 1 | Synthetic Growth Defect | 
            
                | SLY1 | YDR189W | Hydrophilic protein involved in ER/Golgi vesicle trafficking | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | UBC6 | YER100W | Ubiquitin-conjugating enzyme involved in ERAD | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GRE3 | YHR104W | Aldose reductase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RRP6 | YOR001W | Nuclear exosome exonuclease component | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SOH1 | YGL127C | Subunit of the RNA polymerase II mediator complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SPT3 | YDR392W | Subunit of the SAGA and SAGA-like transcriptional regulatory complexes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | UBP6 | YFR010W | Ubiquitin-specific protease | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | EAF5 | YEL018W | Non-essential subunit of the NuA4 acetyltransferase complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HHF1 | YBR009C | Histone H4 | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | UBP8 | YMR223W | Ubiquitin-specific protease component of the SAGA acetylation complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RPA34 | YJL148W | RNA polymerase I subunit A34.5 | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HHT2 | YNL031C | Histone H3 | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ISW2 | YOR304W | ATP-dependent DNA translocase involved in chromatin remodeling | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | DOA1 | YKL213C | WD-repeat protein involved in ubiquitin-mediated protein degradation | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | LEO1 | YOR123C | Component of the Paf1 complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SEM1 | YDR363W-A | 19S proteasome regulatory particle lid subcomplex component | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PHO23 | YNL097C | Component of the Rpd3L histone deacetylase complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PAF1 | YBR279W | Component of the Paf1p complex involved in transcription elongation | genetic | 1 | 1 | 1 | Phenotypic Enhancement | 
            
                | SMX3 | YPR182W | Core Sm protein Sm F | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PRP6 | YBR055C | Splicing factor | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SLU7 | YDR088C | RNA splicing factor | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CDC37 | YDR168W | Essential Hsp90p co-chaperone | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | NUP159 | YIL115C | FG-nucleoporin component of central core of the nuclear pore complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | KRE9 | YJL174W | Glycoprotein involved in cell wall beta-glucan assembly | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CDC3 | YLR314C | Component of the septin ring that is required for cytokinesis | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TAF13 | YML098W | TFIID subunit (19 kDa) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RRS1 | YOR294W | Essential protein that binds ribosomal protein L11 | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | STP22 | YCL008C | Component of the ESCRT-I complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SEH1 | YGL100W | Subunit of the Nup84 nuclear pore and SEACAT subcomplexes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ATG34 | YOL083W | Receptor protein involved in selective autophagy during starvation | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PKC1 | YBL105C | Protein serine/threonine kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PGA2 | YNL149C | Essential protein required for maturation of Gas1p and Pho8p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPL3 | YOR063W | Ribosomal 60S subunit protein L3 | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | STU1 | YBL034C | Microtubule plus-end-tracking non-motor protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PRP9 | YDL030W | Subunit of the SF3a splicing factor complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | LCB2 | YDR062W | Component of serine palmitoyltransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | STN1 | YDR082W | Telomere end-binding and capping protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RRP1 | YDR087C | Essential evolutionarily conserved nucleolar protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SUP35 | YDR172W | Translation termination factor eRF3 | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CDC1 | YDR182W | Putative mannose-ethanolamine phosphate phosphodiesterase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GPI8 | YDR331W | Catalytic subunit of the ER membrane GPI transamidase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SMT3 | YDR510W | Ubiquitin-like protein of the SUMO family | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MOB2 | YFL034C-B | Activator of Cbk1p kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SMD1 | YGR074W | Core Sm protein Sm D1 | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SMC3 | YJL074C | Subunit of the multiprotein cohesin complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PRP21 | YJL203W | Subunit of the SF3a splicing factor complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | EMG1 | YLR186W | Methyltransferase for rRNA | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DBP9 | YLR276C | DEAD-box protein required for 27S rRNA processing | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GCD7 | YLR291C | Beta subunit of translation initiation factor eIF2B | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PGA3 | YML125C | Putative cytochrome b5 reductase, localized to the plasma membrane | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RNA1 | YMR235C | GTPase activating protein (GAP) for Gsp1p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | POL1 | YNL102W | Catalytic subunit of the DNA polymerase I alpha-primase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HRP1 | YOL123W | Subunit of cleavage factor I | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PFY1 | YOR122C | Profilin | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SMP3 | YOR149C | Alpha 1,2-mannosyltransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DFR1 | YOR236W | Dihydrofolate reductase involved in tetrahydrofolate biosynthesis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CLP1 | YOR250C | Component of the cleavage and polyadenylation factor I (CF I) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MYO2 | YOR326W | Type V myosin motor involved in actin-based transport of cargos | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HRR25 | YPL204W | Conserved casein kinase, monopolin subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PMT5 | YDL093W | Protein O-mannosyltransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MRPL9 | YGR220C | Mitochondrial ribosomal protein of the large subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PIH1 | YHR034C | Component of the conserved R2TP complex (Rvb1-Rvb2-Tah1-Pih1) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YIL152W | YIL152W | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PET191 | YJR034W | Protein required for assembly of cytochrome c oxidase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | COQ5 | YML110C | 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MRPL24 | YMR193W | Mitochondrial ribosomal protein of the large subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MRPL10 | YNL284C | Mitochondrial ribosomal protein of the large subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PIF1 | YML061C | DNA helicase, potent G-quadruplex DNA binder/unwinder | genetic | 1 | 1 | 1 | Synthetic Lethality | 
            
                | RPD3 | YNL330C | Histone deacetylase, component of both the Rpd3S and Rpd3L complexes | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPS19A | YOL121C | Protein component of the small (40S) ribosomal subunit | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SWI3 | YJL176C | Subunit of the SWI/SNF chromatin remodeling complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | LST7 | YGR057C | Subunit of the Lst4p-Lst7p GTPase activating protein complex for Gtr2p | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CDC73 | YLR418C | Component of the Paf1p complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CDH1 | YGL003C | Activator of anaphase-promoting complex/cyclosome (APC/C) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RVB1 | YDR190C | ATP-dependent DNA helicase, also known as pontin | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | UBP12 | YJL197W | Ubiquitin-specific protease | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DCK1 | YLR422W | Dock family protein (Dedicator Of CytoKinesis), homolog of human DOCK1 | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TUB4 | YLR212C | Gamma-tubulin | genetic | 1 | 1 | 1 | Synthetic Rescue |