GEnome-wide tool for Multi-scale Modeling
data Extraction and Representation
for Saccharomyces cerevisiae

List of interactors

Use the search utility to find the interactor you are looking for. By clicking the column headers the table will be sorted on that column. Use shift+click to sort on multiple columns. Default sorting is on number of experiments, number of unique methods and the number of publications, and alphabetical on standard name, in that order.

Standard name	Systematic name	Name description	Type	#Experiments	#Methods	#Publications	Evidence
NMD3	YHR170W	Protein involved in nuclear export of the large ribosomal subunit	physical	27	3	24	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Reconstituted Complex, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS
REI1	YBR267W	Cytoplasmic pre-60S factor	physical	23	4	20	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, PCA, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Co-crystal Structure, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
NOG1	YPL093W	Putative GTPase	physical	19	2	16	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS
MEX67	YPL169C	Poly(A)RNA binding protein involved in nuclear mRNA export	physical	17	3	15	Reconstituted Complex, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Reconstituted Complex, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS
NOG2	YNR053C	Putative GTPase	physical	17	2	14	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS
ALB1	YJL122W	Shuttling pre-60S factor	physical	16	5	9	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Two-hybrid, Two-hybrid, Affinity Capture-Western, Co-purification, Co-purification, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Reconstituted Complex
NOP7	YGR103W	Component of several different pre-ribosomal particles	physical	14	2	11	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western
TIF6	YPR016C	Constituent of 66S pre-ribosomal particles	physical	13	2	13	Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS
RIX1	YHR197W	Component of the Rix1 complex and possibly pre-replicative complexes	physical	12	3	10	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS
RPL3	YOR063W	Ribosomal 60S subunit protein L3	physical	12	3	10	Affinity Capture-MS, Reconstituted Complex, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS
NUG1	YER006W	GTPase that associates with nuclear 60S pre-ribosomes	physical	12	2	10	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS
LSG1	YGL099W	Putative GTPase involved in 60S ribosomal subunit biogenesis	physical	11	3	8	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Affinity Capture-Western, Affinity Capture-Western, Co-purification
SDA1	YGR245C	Protein required for actin organization and passage through Start	physical	11	3	8	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
RLP24	YLR009W	Essential protein required for ribosomal large subunit biogenesis	physical	10	3	9	Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Co-purification, Affinity Capture-Western
RSA4	YCR072C	Ribosomal large subunit (60S) assembly factor	physical	10	2	9	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western
NSA2	YER126C	Protein constituent of 66S pre-ribosomal particles	physical	9	2	8	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western
MRT4	YKL009W	Protein involved in mRNA turnover and ribosome assembly	physical	9	2	8	Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western
RPL5	YPL131W	Ribosomal 60S subunit protein L5	physical	8	2	8	Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western
BUD20	YLR074C	C2H2-type zinc finger protein required for ribosome assembly	physical	8	2	6	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western
POM34	YLR018C	Subunit of the transmembrane ring of the nuclear pore complex (NPC)	genetic	8	2	6	Negative Genetic, Synthetic Growth Defect, Negative Genetic, Negative Genetic, Synthetic Growth Defect, Negative Genetic, Negative Genetic, Negative Genetic
POM152	YMR129W	Glycoprotein subunit of transmembrane ring of nuclear pore complex	genetic	8	2	6	Negative Genetic, Synthetic Growth Defect, Negative Genetic, Negative Genetic, Synthetic Growth Defect, Negative Genetic, Negative Genetic, Negative Genetic
ECM1	YAL059W	Pre-ribosomal factor involved in 60S ribosomal protein subunit export	genetic	8	4	5	Negative Genetic, Negative Genetic, Dosage Growth Defect, Synthetic Growth Defect, Synthetic Lethality, Negative Genetic, Negative Genetic, Negative Genetic
NOP53	YPL146C	Nucleolar protein	physical	7	3	7	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Two-hybrid, Affinity Capture-MS, Co-purification, Affinity Capture-MS
MTR2	YKL186C	mRNA transport regulator	physical	7	1	7	Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western
YVH1	YIR026C	Dual specificity protein phosphatase	physical	7	2	6	Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS
RPP0	YLR340W	Conserved ribosomal protein P0 of the ribosomal stalk	physical	6	2	6	Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS
AFG2	YLR397C	ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex	physical	6	2	6	Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western
RPF2	YKR081C	Essential protein involved in rRNA maturation and ribosomal assembly	physical	6	1	6	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
GLE2	YER107C	RNA export factor associated with the nuclear pore complex (NPC)	genetic	6	4	5	Synthetic Growth Defect, Negative Genetic, Synthetic Lethality, Synthetic Growth Defect, Phenotypic Enhancement, Negative Genetic
NUP100	YKL068W	FG-nucleoporin component of central core of the nuclear pore complex	physical	6	3	5	Affinity Capture-MS, Affinity Capture-MS, Two-hybrid, Reconstituted Complex, Two-hybrid, Reconstituted Complex
CIC1	YHR052W	Essential protein that interacts with proteasome components	physical	6	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
NUP42	YDR192C	FG-nucleoporin component of central core of the nuclear pore complex	genetic	5	2	5	Synthetic Growth Defect, Negative Genetic, Synthetic Growth Defect, Synthetic Growth Defect, Synthetic Growth Defect
RLP7	YNL002C	Nucleolar protein similar to large ribosomal subunit L7 proteins	physical	5	1	5	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
MEX67	YPL169C	Poly(A)RNA binding protein involved in nuclear mRNA export	genetic	5	4	3	Dosage Rescue, Synthetic Growth Defect, Synthetic Lethality, Negative Genetic, Negative Genetic
NUP116	YMR047C	FG-nucleoporin component of central core of the nuclear pore complex	genetic	5	3	3	Synthetic Growth Defect, Phenotypic Enhancement, Synthetic Growth Defect, Phenotypic Enhancement, Negative Genetic
NMD3	YHR170W	Protein involved in nuclear export of the large ribosomal subunit	genetic	5	2	3	Dosage Rescue, Synthetic Lethality, Synthetic Lethality, Synthetic Lethality, Synthetic Lethality
NUP133	YKR082W	Subunit of Nup84p subcomplex of nuclear pore complex (NPC)	genetic	5	2	3	Synthetic Growth Defect, Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic
RPL25	YOL127W	Ribosomal 60S subunit protein L25	physical	4	3	4	Affinity Capture-Western, Co-crystal Structure, Affinity Capture-Western, Affinity Capture-MS
PSE1	YMR308C	Karyopherin/importin that interacts with the nuclear pore complex	physical	4	2	4	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS
RPL35A	YDL191W	Ribosomal 60S subunit protein L35A	physical	4	2	4	Affinity Capture-Western, Affinity Capture-Western, Co-crystal Structure, Affinity Capture-Western
JJJ1	YNL227C	Co-chaperone that stimulates the ATPase activity of Ssa1p	genetic	4	2	4	Synthetic Rescue, Synthetic Rescue, Positive Genetic, Synthetic Rescue
POM33	YLL023C	Transmembrane nucleoporin	genetic	4	2	4	Synthetic Growth Defect, Negative Genetic, Negative Genetic, Negative Genetic
REA1	YLR106C	Huge dynein-related AAA-type ATPase (midasin)	physical	4	1	4	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
NUP116	YMR047C	FG-nucleoporin component of central core of the nuclear pore complex	physical	4	3	3	Two-hybrid, Reconstituted Complex, Reconstituted Complex, Affinity Capture-Western
MTR2	YKL186C	mRNA transport regulator	genetic	4	3	3	Dosage Rescue, Synthetic Lethality, Synthetic Lethality, Negative Genetic
REI1	YBR267W	Cytoplasmic pre-60S factor	genetic	4	2	3	Phenotypic Suppression, Synthetic Rescue, Synthetic Rescue, Synthetic Rescue
XRN1	YGL173C	Evolutionarily-conserved 5'-3' exonuclease	genetic	4	1	3	Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic
NUP2	YLR335W	Nucleoporin involved in nucleocytoplasmic transport	genetic	3	2	3	Negative Genetic, Synthetic Growth Defect, Negative Genetic
RPL35B	YDL136W	Ribosomal 60S subunit protein L35B	physical	3	2	3	Affinity Capture-Western, Co-crystal Structure, Affinity Capture-Western
RPL26A	YLR344W	Ribosomal 60S subunit protein L26A	physical	3	2	3	Co-crystal Structure, Affinity Capture-MS, Affinity Capture-MS
RPL16A	YIL133C	Ribosomal 60S subunit protein L16A	physical	3	2	3	Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western
SQS1	YNL224C	Protein that stimulates the ATPase and helicase activities of Prp43p	genetic	3	2	3	Negative Genetic, Synthetic Growth Defect, Negative Genetic
NUP170	YBL079W	Subunit of inner ring of nuclear pore complex (NPC)	genetic	3	2	3	Negative Genetic, Synthetic Growth Defect, Negative Genetic
MRX4	YPL168W	Protein that associates with mitochondrial ribosome	genetic	3	2	3	Synthetic Growth Defect, Negative Genetic, Negative Genetic
RPL4A	YBR031W	Ribosomal 60S subunit protein L4A	physical	3	1	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
IPI3	YNL182C	Component of the Rix1 complex and pre-replicative complexes (pre-RCs)	physical	3	1	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
SQT1	YIR012W	Specific assembly chaperone for ribosomal protein Rpl10p	physical	3	1	3	Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western
RPL8A	YHL033C	Ribosomal 60S subunit protein L8A	physical	3	1	3	Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western
BUD32	YGR262C	Protein kinase	genetic	3	1	3	Negative Genetic, Negative Genetic, Negative Genetic
BUD20	YLR074C	C2H2-type zinc finger protein required for ribosome assembly	genetic	3	3	2	Phenotypic Enhancement, Synthetic Lethality, Synthetic Growth Defect
NUP120	YKL057C	Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC)	genetic	3	3	2	Synthetic Lethality, Synthetic Growth Defect, Negative Genetic
ARB1	YER036C	ATPase of the ATP-binding cassette (ABC) family	physical	3	2	2	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western
RPL2A	YFR031C-A	Ribosomal 60S subunit protein L2A	physical	3	1	2	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
PET122	YER153C	Mitochondrial translational activator specific for the COX3 mRNA	genetic	3	1	2	Negative Genetic, Negative Genetic, Negative Genetic
RHO2	YNL090W	Non-essential small GTPase of the Rho/Rac family of Ras-like proteins	genetic	3	1	2	Negative Genetic, Negative Genetic, Negative Genetic
ARL3	YPL051W	ARF-like small GTPase of the RAS superfamily	genetic	3	1	2	Negative Genetic, Negative Genetic, Negative Genetic
APQ12	YIL040W	Nuclear envelope/ER integral membrane protein	genetic	3	1	2	Negative Genetic, Negative Genetic, Negative Genetic
ARX1	YDR101C	Nuclear export factor for the ribosomal pre-60S subunit	physical	2	2	2	Affinity Capture-MS, Affinity Capture-Western
NUP42	YDR192C	FG-nucleoporin component of central core of the nuclear pore complex	physical	2	2	2	Affinity Capture-MS, Reconstituted Complex
SSB2	YNL209W	Cytoplasmic ATPase that is a ribosome-associated molecular chaperone	physical	2	2	2	Affinity Capture-MS, Co-purification
NUP82	YJL061W	Linker nucleoporin component of the nuclear pore complex (NPC)	genetic	2	2	2	Synthetic Growth Defect, Negative Genetic
NIC96	YFR002W	Linker nucleoporin component of the nuclear pore complex (NPC)	genetic	2	2	2	Synthetic Growth Defect, Negative Genetic
CDC13	YDL220C	Single stranded DNA-binding protein found at TG1-3 telomere G-tails	genetic	2	2	2	Synthetic Rescue, Positive Genetic
SDD3	YOL098C	Putative metalloprotease	genetic	2	2	2	Synthetic Growth Defect, Negative Genetic
RPL8B	YLL045C	Ribosomal 60S subunit protein L8A	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
SDA1	YGR245C	Protein required for actin organization and passage through Start	genetic	2	1	2	Negative Genetic, Negative Genetic
NOP15	YNL110C	Constituent of 66S pre-ribosomal particles	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
NUG1	YER006W	GTPase that associates with nuclear 60S pre-ribosomes	genetic	2	1	2	Negative Genetic, Negative Genetic
RPL31A	YDL075W	Ribosomal 60S subunit protein L31A	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
IPI1	YHR085W	Component of the Rix1 complex and possibly pre-replicative complexes	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
RPL4B	YDR012W	Ribosomal 60S subunit protein L4B	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
NUP57	YGR119C	FG-nucleoporin component of central core of the nuclear pore complex	genetic	2	1	2	Negative Genetic, Negative Genetic
NUP1	YOR098C	FG-nucleoporin component of central core of the nuclear pore complex	physical	2	1	2	Reconstituted Complex, Reconstituted Complex
RPL1A	YPL220W	Ribosomal 60S subunit protein L1A	physical	2	1	2	Affinity Capture-Western, Affinity Capture-Western
RPL10	YLR075W	Ribosomal 60S subunit protein L10	physical	2	1	2	Affinity Capture-Western, Affinity Capture-Western
RPL16B	YNL069C	Ribosomal 60S subunit protein L16B	physical	2	1	2	Affinity Capture-Western, Affinity Capture-Western
SSA1	YAL005C	ATPase involved in protein folding and NLS-directed nuclear transport	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
RPL23A	YBL087C	Ribosomal 60S subunit protein L23A	physical	2	1	2	Affinity Capture-Western, Affinity Capture-Western
TRF5	YNL299W	Non-canonical poly(A) polymerase	genetic	2	1	2	Negative Genetic, Negative Genetic
YKL069W	YKL069W	Methionine-R-sulfoxide reductase	genetic	2	1	2	Negative Genetic, Negative Genetic
NUP157	YER105C	Subunit of the inner ring of the nuclear pore complex (NPC)	genetic	2	1	2	Negative Genetic, Negative Genetic
YVH1	YIR026C	Dual specificity protein phosphatase	genetic	2	2	1	Synthetic Growth Defect, Phenotypic Enhancement
XRN1	YGL173C	Evolutionarily-conserved 5'-3' exonuclease	physical	2	2	1	Affinity Capture-Western, Affinity Capture-MS
SGS1	YMR190C	RecQ family nucleolar DNA helicase	genetic	2	2	1	Positive Genetic, Negative Genetic
RPP0	YLR340W	Conserved ribosomal protein P0 of the ribosomal stalk	genetic	2	1	1	Negative Genetic, Negative Genetic
LAS1	YKR063C	Endonuclease involved in pre-rRNA processing at both ends of ITS2	physical	2	1	1	Affinity Capture-Western, Affinity Capture-Western
CGR1	YGL029W	Protein involved in nucleolar integrity and processing of pre-rRNA	physical	2	1	1	Affinity Capture-MS, Affinity Capture-MS
VBA2	YBR293W	Permease of basic amino acids in the vacuolar membrane	genetic	2	1	1	Negative Genetic, Negative Genetic
PEX18	YHR160C	Peroxin	genetic	2	1	1	Negative Genetic, Negative Genetic
SRS2	YJL092W	DNA helicase and DNA-dependent ATPase	genetic	2	1	1	Dosage Lethality, Dosage Lethality
CDC28	YBR160W	Cyclin-dependent kinase (CDK) catalytic subunit	genetic	2	1	1	Negative Genetic, Negative Genetic
CDC4	YFL009W	F-box protein required for both the G1/S and G2/M phase transitions	genetic	2	1	1	Negative Genetic, Negative Genetic
NUP145	YGL092W	Essential protein with distinct roles in two nuclear pore subcomplexes	genetic	2	1	1	Negative Genetic, Negative Genetic
EXO70	YJL085W	Subunit of the exocyst complex	genetic	2	1	1	Negative Genetic, Negative Genetic
AFG2	YLR397C	ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex	genetic	2	1	1	Negative Genetic, Negative Genetic
SFP1	YLR403W	Regulates transcription of ribosomal protein and biogenesis genes	regulation	1	1	1	DNA to cDNA expression microarray evidence
YAP6	YDR259C	Basic leucine zipper (bZIP) transcription factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SPT3	YDR392W	Subunit of the SAGA and SAGA-like transcriptional regulatory complexes	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
UGA3	YDL170W	Transcriptional activator for GABA-dependent induction of GABA genes	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RPL20B	YOR312C	Ribosomal 60S subunit protein L20B	physical	1	1	1	Affinity Capture-MS
ERP2	YAL007C	Member of the p24 family involved in ER to Golgi transport	physical	1	1	1	Affinity Capture-MS
MYO4	YAL029C	Type V myosin motor involved in actin-based transport of cargos	physical	1	1	1	Affinity Capture-MS
DSS4	YPR017C	Guanine nucleotide dissociation stimulator for Sec4p	physical	1	1	1	Affinity Capture-MS
NOG1	YPL093W	Putative GTPase	genetic	1	1	1	Negative Genetic
RSA4	YCR072C	Ribosomal large subunit (60S) assembly factor	genetic	1	1	1	Negative Genetic
RLP24	YLR009W	Essential protein required for ribosomal large subunit biogenesis	genetic	1	1	1	Negative Genetic
CDC37	YDR168W	Essential Hsp90p co-chaperone	physical	1	1	1	Affinity Capture-MS
MRT4	YKL009W	Protein involved in mRNA turnover and ribosome assembly	genetic	1	1	1	Negative Genetic
RPL3	YOR063W	Ribosomal 60S subunit protein L3	genetic	1	1	1	Dosage Rescue
FPR4	YLR449W	Peptidyl-prolyl cis-trans isomerase (PPIase)	physical	1	1	1	Affinity Capture-MS
NIP7	YPL211W	Nucleolar protein required for 60S ribosome subunit biogenesis	physical	1	1	1	Affinity Capture-MS
NOG2	YNR053C	Putative GTPase	genetic	1	1	1	Negative Genetic
RPL27A	YHR010W	Ribosomal 60S subunit protein L27A	physical	1	1	1	Affinity Capture-MS
RPL30	YGL030W	Ribosomal 60S subunit protein L30	physical	1	1	1	Affinity Capture-MS
RPL36B	YPL249C-A	Ribosomal 60S subunit protein L36B	physical	1	1	1	Affinity Capture-MS
RPL7A	YGL076C	Ribosomal 60S subunit protein L7A	physical	1	1	1	Affinity Capture-MS
RPL20A	YMR242C	Ribosomal 60S subunit protein L20A	physical	1	1	1	Affinity Capture-MS
NOP13	YNL175C	Nucleolar protein found in preribosomal complexes	physical	1	1	1	Affinity Capture-MS
RPL18A	YOL120C	Ribosomal 60S subunit protein L18A	physical	1	1	1	Affinity Capture-MS
PRP43	YGL120C	RNA helicase in the DEAH-box family	physical	1	1	1	Affinity Capture-MS
NOP9	YJL010C	Essential subunit of U3-containing 90S preribosome	physical	1	1	1	Affinity Capture-MS
NOP9	YJL010C	Essential subunit of U3-containing 90S preribosome	genetic	1	1	1	Negative Genetic
NUP57	YGR119C	FG-nucleoporin component of central core of the nuclear pore complex	physical	1	1	1	Two-hybrid
NSP1	YJL041W	FG-nucleoporin component of central core of the nuclear pore complex	physical	1	1	1	Reconstituted Complex
NSP1	YJL041W	FG-nucleoporin component of central core of the nuclear pore complex	genetic	1	1	1	Negative Genetic
NUP159	YIL115C	FG-nucleoporin component of central core of the nuclear pore complex	physical	1	1	1	Reconstituted Complex
NUP49	YGL172W	FG-nucleoporin component of central core of the nuclear pore complex	physical	1	1	1	Reconstituted Complex
NUP60	YAR002W	FG-nucleoporin component of central core of the nuclear pore complex	physical	1	1	1	Reconstituted Complex
NUP2	YLR335W	Nucleoporin involved in nucleocytoplasmic transport	physical	1	1	1	Reconstituted Complex
RPL24A	YGL031C	Ribosomal 60S subunit protein L24A	physical	1	1	1	Affinity Capture-Western
RPN1	YHR027C	Non-ATPase base subunit of the 19S RP of the 26S proteasome	physical	1	1	1	Affinity Capture-MS
RPN10	YHR200W	Proteasome polyubiquitin receptor	physical	1	1	1	Affinity Capture-MS
RPN11	YFR004W	Metalloprotease subunit of 19S regulatory particle	physical	1	1	1	Affinity Capture-MS
ECM1	YAL059W	Pre-ribosomal factor involved in 60S ribosomal protein subunit export	physical	1	1	1	Affinity Capture-Western
JJJ1	YNL227C	Co-chaperone that stimulates the ATPase activity of Ssa1p	physical	1	1	1	Affinity Capture-Western
RRP17	YDR412W	5' exoribonuclease required for 5' end processing of pre-60S rRNA	physical	1	1	1	Affinity Capture-MS
NPL3	YDR432W	RNA-binding protein	physical	1	1	1	Affinity Capture-Western
LAS1	YKR063C	Endonuclease involved in pre-rRNA processing at both ends of ITS2	genetic	1	1	1	Negative Genetic
RPL1B	YGL135W	Ribosomal 60S subunit protein L1B	physical	1	1	1	Affinity Capture-Western
PAB1	YER165W	Poly(A) binding protein	physical	1	1	1	Affinity Capture-MS
PAB1	YER165W	Poly(A) binding protein	genetic	1	1	1	Negative Genetic
RPL11B	YGR085C	Ribosomal 60S subunit protein L11B	physical	1	1	1	Affinity Capture-MS
RPL21A	YBR191W	Ribosomal 60S subunit protein L21A	physical	1	1	1	Affinity Capture-MS
RPL26B	YGR034W	Ribosomal 60S subunit protein L26B	physical	1	1	1	Co-crystal Structure
RPL19A	YBR084C-A	Ribosomal 60S subunit protein L19A	physical	1	1	1	Co-crystal Structure
RPL19B	YBL027W	Ribosomal 60S subunit protein L19B	physical	1	1	1	Co-crystal Structure
RSA1	YPL193W	Protein involved in the assembly of 60S ribosomal subunits	physical	1	1	1	Affinity Capture-MS
PWP1	YLR196W	Protein with WD-40 repeats involved in rRNA processing	physical	1	1	1	Affinity Capture-Western
GLE2	YER107C	RNA export factor associated with the nuclear pore complex (NPC)	physical	1	1	1	Affinity Capture-Western
RPL10	YLR075W	Ribosomal 60S subunit protein L10	genetic	1	1	1	Positive Genetic
VAM6	YDL077C	Guanine nucleotide exchange factor for the GTPase Gtr1p	physical	1	1	1	Affinity Capture-MS
HMT1	YBR034C	Nuclear SAM-dependent mono- and asymmetric methyltransferase	physical	1	1	1	PCA
CRM1	YGR218W	Nuclear export factor, exportin	physical	1	1	1	Affinity Capture-MS
CRM1	YGR218W	Nuclear export factor, exportin	genetic	1	1	1	Synthetic Growth Defect
MMS22	YLR320W	Subunit of E3 ubiquitin ligase complex involved in replication repair	physical	1	1	1	Affinity Capture-MS
TOM1	YDR457W	E3 ubiquitin ligase of the hect-domain class	physical	1	1	1	Affinity Capture-MS
TOM1	YDR457W	E3 ubiquitin ligase of the hect-domain class	genetic	1	1	1	Negative Genetic
RPC82	YPR190C	RNA polymerase III subunit C82	physical	1	1	1	Affinity Capture-MS
PUF6	YDR496C	Pumilio-homology domain protein	physical	1	1	1	Affinity Capture-Western
LOC1	YFR001W	Nucleolar protein involved in the asymmetric localization of ASH1 mRNA	physical	1	1	1	Affinity Capture-Western
RPL43B	YJR094W-A	Ribosomal 60S subunit protein L43B	physical	1	1	1	Affinity Capture-Western
NOC4	YPR144C	Nucleolar protein	physical	1	1	1	Affinity Capture-MS
ESP1	YGR098C	Separase/separin, a caspase-like cysteine protease	physical	1	1	1	Affinity Capture-MS
DHH1	YDL160C	Cytoplasmic DEAD-box helicase and mRNA decapping activator	physical	1	1	1	Affinity Capture-RNA
PUF4	YGL014W	Member of the PUF protein family	physical	1	1	1	Affinity Capture-RNA
MPT5	YGL178W	mRNA-binding protein of the PUF family	physical	1	1	1	Affinity Capture-RNA
KRR1	YCL059C	Nucleolar protein required for rRNA synthesis and ribosomal assembly	physical	1	1	1	Affinity Capture-MS
ECM16	YMR128W	Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP	physical	1	1	1	Affinity Capture-MS
UTP10	YJL109C	Nucleolar protein	physical	1	1	1	Affinity Capture-MS
CAF20	YOR276W	Phosphoprotein of the mRNA cap-binding complex	physical	1	1	1	Affinity Capture-MS
RET1	YOR207C	Second-largest subunit of RNA polymerase III	physical	1	1	1	Affinity Capture-MS
TFC6	YDR362C	Subunit of RNA polymerase III transcription initiation factor complex	physical	1	1	1	Affinity Capture-MS
DBP10	YDL031W	Putative ATP-dependent RNA helicase of the DEAD-box protein family	physical	1	1	1	Affinity Capture-MS
SPB1	YCL054W	AdoMet-dependent methyltransferase	physical	1	1	1	Affinity Capture-MS
ASC1	YMR116C	G-protein beta subunit and guanine dissociation inhibitor for Gpa2p	physical	1	1	1	Affinity Capture-MS
RPS0A	YGR214W	Ribosomal 40S subunit protein S0A	physical	1	1	1	Affinity Capture-MS
RPS1A	YLR441C	Ribosomal protein of the small (40S) subunit	physical	1	1	1	Affinity Capture-MS
RPS2	YGL123W	Protein component of the small (40S) subunit	physical	1	1	1	Affinity Capture-MS
RPS6A	YPL090C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS7A	YOR096W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS8A	YBL072C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS9A	YPL081W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS10A	YOR293W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS12	YOR369C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS13	YDR064W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS15	YOL040C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS17A	YML024W	Ribosomal protein 51 (rp51) of the small (40s) subunit	physical	1	1	1	Affinity Capture-MS
RPS18A	YDR450W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS19A	YOL121C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS20	YHL015W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS22A	YJL190C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS27A	YKL156W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS3	YNL178W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS14A	YCR031C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
PAP2	YOL115W	Non-canonical poly(A) polymerase	physical	1	1	1	Affinity Capture-MS
TRF5	YNL299W	Non-canonical poly(A) polymerase	physical	1	1	1	Affinity Capture-MS
MTQ2	YDR140W	S-adenosylmethionine-dependent methyltransferase	physical	1	1	1	Affinity Capture-MS
HAC1	YFL031W	Basic leucine zipper (bZIP) transcription factor (ATF/CREB1 homolog)	physical	1	1	1	Affinity Capture-RNA
MTR4	YJL050W	RNA duplex-sensing translocase	physical	1	1	1	Affinity Capture-MS
SNF11	YDR073W	Subunit of the SWI/SNF chromatin remodeling complex	genetic	1	1	1	Negative Genetic
CTI6	YPL181W	Component of the Rpd3L histone deacetylase complex	genetic	1	1	1	Negative Genetic
LTE1	YAL024C	Protein similar to GDP/GTP exchange factors	genetic	1	1	1	Synthetic Growth Defect
NUP84	YDL116W	Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC)	genetic	1	1	1	Synthetic Growth Defect
UBI4	YLL039C	Ubiquitin	genetic	1	1	1	Negative Genetic
MEF1	YLR069C	Mitochondrial elongation factor involved in translational elongation	genetic	1	1	1	Negative Genetic
PHO23	YNL097C	Component of the Rpd3L histone deacetylase complex	genetic	1	1	1	Negative Genetic
THP2	YHR167W	Subunit of the THO and TREX complexes	genetic	1	1	1	Negative Genetic
HCR1	YLR192C	eIF3j component of translation initiation factor 3 (eIF3)	genetic	1	1	1	Positive Genetic
NCL1	YBL024W	S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase	genetic	1	1	1	Positive Genetic
STO1	YMR125W	Large subunit of the nuclear mRNA cap-binding protein complex	genetic	1	1	1	Positive Genetic
ELP2	YGR200C	Subunit of Elongator complex	genetic	1	1	1	Positive Genetic
TIF1	YKR059W	Translation initiation factor eIF4A	genetic	1	1	1	Positive Genetic
NMA111	YNL123W	Serine protease and general molecular chaperone	genetic	1	1	1	Synthetic Growth Defect
PAU17	YLL025W	Protein of unknown function	genetic	1	1	1	Synthetic Growth Defect
MRN1	YPL184C	RNA-binding protein that may be involved in translational regulation	genetic	1	1	1	Synthetic Growth Defect
PTA1	YAL043C	Subunit of holo-CPF	genetic	1	1	1	Negative Genetic
RMD8	YFR048W	Cytosolic protein required for sporulation	genetic	1	1	1	Negative Genetic
WBP1	YEL002C	Beta subunit of the oligosaccharyl transferase glycoprotein complex	genetic	1	1	1	Negative Genetic
PMA1	YGL008C	Plasma membrane P2-type H+-ATPase	genetic	1	1	1	Negative Genetic
GCN5	YGR252W	Catalytic subunit of ADA and SAGA histone acetyltransferase complexes	genetic	1	1	1	Positive Genetic
PRP16	YKR086W	DEAH-box RNA helicase	genetic	1	1	1	Negative Genetic
CDC3	YLR314C	Component of the septin ring that is required for cytokinesis	genetic	1	1	1	Negative Genetic
ATP11	YNL315C	Molecular chaperone	genetic	1	1	1	Negative Genetic
NRD1	YNL251C	RNA-binding subunit of Nrd1 complex	genetic	1	1	1	Negative Genetic
RIA1	YNL163C	Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis	genetic	1	1	1	Negative Genetic
ASM4	YDL088C	FG-nucleoporin component of central core of nuclear pore complex (NPC)	genetic	1	1	1	Synthetic Growth Defect
TEL2	YGR099W	Subunit of the ASTRA complex, involved in chromatin remodeling	genetic	1	1	1	Positive Genetic
REB1	YBR049C	RNA polymerase I enhancer binding protein	genetic	1	1	1	Positive Genetic
NOP19	YGR251W	Ribosome biogenesis factor	genetic	1	1	1	Positive Genetic
THS1	YIL078W	Threonyl-tRNA synthetase	genetic	1	1	1	Positive Genetic
TAO3	YIL129C	Component of the RAM signaling network	genetic	1	1	1	Positive Genetic
DHR2	YKL078W	Predominantly nucleolar DEAH-box ATP-dependent RNA helicase	genetic	1	1	1	Positive Genetic
NSE1	YLR007W	Component of the SMC5-SMC6 complex	genetic	1	1	1	Positive Genetic
CBF5	YLR175W	Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs	genetic	1	1	1	Positive Genetic
SMD2	YLR275W	Core Sm protein Sm D2	genetic	1	1	1	Positive Genetic
TIF34	YMR146C	eIF3i subunit of the eukaryotic translation initiation factor 3 (eIF3)	genetic	1	1	1	Positive Genetic
PGA2	YNL149C	Essential protein required for maturation of Gas1p and Pho8p	genetic	1	1	1	Positive Genetic
POP3	YNL282W	Subunit of both RNase MRP and nuclear RNase P	genetic	1	1	1	Positive Genetic
KRI1	YNL308C	Essential nucleolar protein required for 40S ribosome biogenesis	genetic	1	1	1	Positive Genetic
SOG2	YOR353C	Key component of the RAM signaling network	genetic	1	1	1	Positive Genetic
TAF3	YPL011C	TFIID subunit (47 kDa)	genetic	1	1	1	Positive Genetic
BMS1	YPL217C	GTPase required for ribosomal subunit synthesis and rRNA processing	genetic	1	1	1	Positive Genetic
MRD1	YPR112C	Essential conserved small ribosomal subunit (40s) synthesis factor	genetic	1	1	1	Positive Genetic
SMX3	YPR182W	Core Sm protein Sm F	genetic	1	1	1	Positive Genetic
BRN1	YBL097W	Subunit of the condensin complex	genetic	1	1	1	Positive Genetic
RBG1	YAL036C	Member of the DRG family of GTP-binding proteins	genetic	1	1	1	Positive Genetic
TSC3	YBR058C-A	Protein that stimulates the activity of serine palmitoyltransferase	genetic	1	1	1	Positive Genetic
MIC12	YBR262C	Component of the MICOS complex	genetic	1	1	1	Positive Genetic
CNN1	YFR046C	Kinetochore protein	genetic	1	1	1	Positive Genetic
NDT80	YHR124W	Meiosis-specific transcription factor	genetic	1	1	1	Positive Genetic
ROF1	YHR177W	Putative transcription factor containing a WOPR domain	genetic	1	1	1	Positive Genetic
PRM2	YIL037C	Pheromone-regulated protein	genetic	1	1	1	Positive Genetic
AYR1	YIL124W	Bifunctional triacylglycerol lipase and 1-acyl DHAP reductase	genetic	1	1	1	Positive Genetic
PRY1	YJL079C	Lipid binding protein	genetic	1	1	1	Positive Genetic
YJL107C	YJL107C	Putative protein of unknown function	genetic	1	1	1	Positive Genetic
SEG2	YKL105C	Eisosome component	genetic	1	1	1	Positive Genetic
IES3	YLR052W	Subunit of the INO80 chromatin remodeling complex	genetic	1	1	1	Positive Genetic
TCB3	YML072C	Cortical ER protein involved in ER-plasma membrane tethering	genetic	1	1	1	Positive Genetic
YMR155W	YMR155W	Putative protein of unknown function	genetic	1	1	1	Positive Genetic
PHO91	YNR013C	Low-affinity vacuolar phosphate transporter	genetic	1	1	1	Positive Genetic
PRS5	YOL061W	5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase	genetic	1	1	1	Positive Genetic
DNL4	YOR005C	DNA ligase required for nonhomologous end-joining (NHEJ)	genetic	1	1	1	Positive Genetic
CRS5	YOR031W	Copper-binding metallothionein	genetic	1	1	1	Positive Genetic
YOR034C-A	YOR034C-A	Putative protein of unknown function	genetic	1	1	1	Positive Genetic
TOM6	YOR045W	Component of the TOM (translocase of outer membrane) complex	genetic	1	1	1	Positive Genetic
YPL039W	YPL039W	Putative protein of unknown function	genetic	1	1	1	Positive Genetic
PRE7	YBL041W	Beta 6 subunit of the 20S proteasome	genetic	1	1	1	Negative Genetic
RER2	YBR002C	Forms the dehydrodolichyl diphosphate synthase (DDS) complex with NUS1	genetic	1	1	1	Negative Genetic
COP1	YDL145C	Alpha subunit of COPI vesicle coatomer complex	genetic	1	1	1	Negative Genetic
TRS31	YDR472W	Core component of transport protein particle (TRAPP) complexes I-III	genetic	1	1	1	Negative Genetic
SNU13	YEL026W	RNA binding protein	genetic	1	1	1	Negative Genetic
PMI40	YER003C	Mannose-6-phosphate isomerase	genetic	1	1	1	Negative Genetic
BRR2	YER172C	RNA-dependent ATPase RNA helicase (DEIH box)	genetic	1	1	1	Negative Genetic
SCL1	YGL011C	Alpha 1 subunit of the 20S proteasome	genetic	1	1	1	Negative Genetic
VHT1	YGR065C	High-affinity plasma membrane H+-biotin (vitamin H) symporter	genetic	1	1	1	Negative Genetic
DAM1	YGR113W	Essential subunit of the Dam1 complex (aka DASH complex)	genetic	1	1	1	Negative Genetic
UTP8	YGR128C	Nucleolar protein required for export of tRNAs from the nucleus	genetic	1	1	1	Negative Genetic
ERG7	YHR072W	Lanosterol synthase	genetic	1	1	1	Negative Genetic
CFD1	YIL003W	Highly conserved iron-sulfur cluster binding protein	genetic	1	1	1	Negative Genetic
TIM54	YJL054W	Component of the mitochondrial TIM22 complex	genetic	1	1	1	Negative Genetic
CDC11	YJR076C	Component of the septin ring that is required for cytokinesis	genetic	1	1	1	Negative Genetic
MAK11	YKL021C	Protein involved in an early step of 60S ribosomal subunit biogenesis	genetic	1	1	1	Negative Genetic
ATM1	YMR301C	Mitochondrial inner membrane ATP-binding cassette (ABC) transporter	genetic	1	1	1	Negative Genetic
NOP2	YNL061W	rRNA m5C methyltransferase	genetic	1	1	1	Negative Genetic
DBP2	YNL112W	ATP-dependent RNA helicase of the DEAD-box protein family	genetic	1	1	1	Negative Genetic
PBR1	YNL181W	Putative oxidoreductase	genetic	1	1	1	Negative Genetic
ESF2	YNR054C	Essential nucleolar protein involved in pre-18S rRNA processing	genetic	1	1	1	Negative Genetic
BRX1	YOL077C	Nucleolar protein	genetic	1	1	1	Negative Genetic
NOP8	YOL144W	Nucleolar protein required for 60S ribosomal subunit biogenesis	genetic	1	1	1	Negative Genetic
DBP5	YOR046C	Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family	genetic	1	1	1	Negative Genetic
TFB2	YPL122C	Subunit of TFIIH and nucleotide excision repair factor 3 complexes	genetic	1	1	1	Negative Genetic
TAH18	YPR048W	Conserved NAPDH-dependent diflavin reductase	genetic	1	1	1	Negative Genetic
COG4	YPR105C	Essential component of the conserved oligomeric Golgi complex	genetic	1	1	1	Negative Genetic
MAS2	YHR024C	Alpha subunit of the mitochondrial processing protease (MPP)	genetic	1	1	1	Negative Genetic
BRL1	YHR036W	Essential nuclear envelope/ER integral membrane protein	genetic	1	1	1	Negative Genetic
CDC8	YJR057W	Nucleoside monophosphate and nucleoside diphosphate kinase	genetic	1	1	1	Negative Genetic
CDC21	YOR074C	Thymidylate synthase	genetic	1	1	1	Negative Genetic
DFR1	YOR236W	Dihydrofolate reductase involved in tetrahydrofolate biosynthesis	genetic	1	1	1	Negative Genetic
CSG2	YBR036C	Endoplasmic reticulum membrane protein	genetic	1	1	1	Negative Genetic
SMP1	YBR182C	MADS-box transcription factor involved in osmotic stress response	genetic	1	1	1	Negative Genetic
MBA1	YBR185C	Membrane-associated mitochondrial ribosome receptor	genetic	1	1	1	Negative Genetic
MRM2	YGL136C	Mitochondrial 2' O-ribose methyltransferase	genetic	1	1	1	Negative Genetic
TMA23	YMR269W	Nucleolar protein implicated in ribosome biogenesis	genetic	1	1	1	Negative Genetic
EOS1	YNL080C	Protein involved in N-glycosylation	genetic	1	1	1	Negative Genetic
RRP6	YOR001W	Nuclear exosome exonuclease component	genetic	1	1	1	Negative Genetic
YEF1	YEL041W	ATP-NADH kinase	genetic	1	1	1	Negative Genetic
SER3	YER081W	3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase	genetic	1	1	1	Negative Genetic
IRC7	YFR055W	Cysteine desulphydrase, enables growth on cysteine as nitrogen source	genetic	1	1	1	Negative Genetic
YGR016W	YGR016W	Putative protein of unknown function	genetic	1	1	1	Negative Genetic
THI4	YGR144W	Thiazole synthase	genetic	1	1	1	Negative Genetic
GTO1	YGR154C	Omega-class glutathione transferase	genetic	1	1	1	Negative Genetic
BCP1	YDR361C	Essential nuclear chaperone for ribosomal protein Rpl23p	genetic	1	1	1	Synthetic Growth Defect
UBR1	YGR184C	E3 ubiquitin ligase (N-recognin)	genetic	1	1	1	Negative Genetic
FMC1	YIL098C	Mitochondrial matrix protein	genetic	1	1	1	Negative Genetic
COX5B	YIL111W	Subunit Vb of cytochrome c oxidase	genetic	1	1	1	Negative Genetic
YJL047C-A	YJL047C-A	Putative protein of unknown function	genetic	1	1	1	Negative Genetic
PRY3	YJL078C	GPI-anchored cell wall protein involved in export of sterols	genetic	1	1	1	Negative Genetic
DEF1	YKL054C	RNAPII degradation factor	genetic	1	1	1	Negative Genetic
DBP7	YKR024C	Putative ATP-dependent RNA helicase of the DEAD-box family	genetic	1	1	1	Negative Genetic
VBA5	YKR105C	Plasma membrane protein of the Major Facilitator Superfamily (MFS)	genetic	1	1	1	Negative Genetic
YPS1	YLR120C	Aspartic protease	genetic	1	1	1	Negative Genetic
YLR162W	YLR162W	Protein of unknown function	genetic	1	1	1	Negative Genetic
SPT6	YGR116W	Nucleosome remodeling protein	genetic	1	1	1	Synthetic Growth Defect
CIK1	YMR198W	Kinesin-associated protein	genetic	1	1	1	Negative Genetic
GAS3	YMR215W	Putative 1,3-beta-glucanosyltransferase	genetic	1	1	1	Negative Genetic
WSC2	YNL283C	Sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway	genetic	1	1	1	Negative Genetic
STD1	YOR047C	Protein involved in control of glucose-regulated gene expression	genetic	1	1	1	Negative Genetic
SUR1	YPL057C	Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit	genetic	1	1	1	Negative Genetic
BRO1	YPL084W	Cytoplasmic class E vacuolar protein sorting (VPS) factor	genetic	1	1	1	Negative Genetic
DOM34	YNL001W	Protein that facilitates ribosomal subunit dissociation	genetic	1	1	1	Synthetic Growth Defect
YLR363W-A	YLR363W-A	Protein of unknown function	genetic	1	1	1	Negative Genetic
TRM2	YKR056W	tRNA methyltransferase	genetic	1	1	1	Negative Genetic
EAF7	YNL136W	Subunit of the NuA4 histone acetyltransferase complex	genetic	1	1	1	Negative Genetic
SET1	YHR119W	Histone methyltransferase, subunit of the COMPASS (Set1C) complex	genetic	1	1	1	Negative Genetic
MTC1	YJL123C	Protein of unknown function that may interact with ribosomes	genetic	1	1	1	Negative Genetic
UCC1	YLR224W	F-box protein and component of SCF ubiquitin ligase complexes	genetic	1	1	1	Negative Genetic
CST9	YLR394W	SUMO E3 ligase	genetic	1	1	1	Negative Genetic
DAL82	YNL314W	Positive regulator of allophanate inducible genes	genetic	1	1	1	Negative Genetic
EAF3	YPR023C	Component of the Rpd3S histone deacetylase complex	genetic	1	1	1	Positive Genetic
SPC3	YLR066W	Subunit of signal peptidase complex	genetic	1	1	1	Negative Genetic
SPC98	YNL126W	Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex	genetic	1	1	1	Negative Genetic
STE6	YKL209C	Plasma membrane ATP-binding cassette (ABC) transporter	genetic	1	1	1	Negative Genetic
NIS1	YNL078W	Protein involved in axial bud site selection	genetic	1	1	1	Negative Genetic
HRQ1	YDR291W	3'-5' DNA helicase of the conserved RecQ family	genetic	1	1	1	Negative Genetic
ACT1	YFL039C	Actin, structural protein in cytoskeleton	genetic	1	1	1	Positive Genetic
ACS2	YLR153C	Acetyl-coA synthetase isoform	genetic	1	1	1	Negative Genetic
AIM46	YHR199C	Protein of unknown function	genetic	1	1	1	Positive Genetic
AIR1	YIL079C	Zinc knuckle protein	physical	1	1	1	Affinity Capture-MS
ARP1	YHR129C	Actin-related protein of the dynactin complex	genetic	1	1	1	Synthetic Lethality
ART5	YGR068C	Protein proposed to regulate endocytosis of plasma membrane proteins	genetic	1	1	1	Positive Genetic
ARP6	YLR085C	Actin-related protein that binds nucleosomes	genetic	1	1	1	Positive Genetic
ALG1	YBR110W	Mannosyltransferase	genetic	1	1	1	Negative Genetic
AQY3	YFL054C	Putative channel-like protein	genetic	1	1	1	Positive Genetic
ARV1	YLR242C	Cortical ER protein	genetic	1	1	1	Positive Genetic