| PMT1 | YDL095W | Protein O-mannosyltransferase of the ER membrane | genetic | 7 | 4 | 5 | Dosage Rescue, Synthetic Lethality, Synthetic Growth Defect, Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | PMT2 | YAL023C | Protein O-mannosyltransferase of the ER membrane | genetic | 6 | 4 | 4 | Phenotypic Enhancement, Synthetic Lethality, Synthetic Growth Defect, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | SEC66 | YBR171W | Non-essential subunit of Sec63 complex | genetic | 4 | 1 | 3 | Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | BST1 | YFL025C | GPI inositol deacylase of the endoplasmic reticulum (ER) | genetic | 4 | 1 | 3 | Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | GUP1 | YGL084C | Plasma membrane protein involved in remodeling GPI anchors | genetic | 4 | 1 | 3 | Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | LAS21 | YJL062W | Mannose-ethanolamine phosphotransferase | genetic | 4 | 1 | 3 | Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | ERV25 | YML012W | Member of the p24 family involved in ER to Golgi transport | genetic | 3 | 1 | 2 | Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | GAS1 | YMR307W | Beta-1,3-glucanosyltransferase required for cell wall assembly | genetic | 3 | 1 | 2 | Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | SPF1 | YEL031W | P-type ATPase, ion transporter of the ER membrane | genetic | 3 | 1 | 2 | Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | PMR1 | YGL167C | High affinity Ca2+/Mn2+ P-type ATPase | genetic | 3 | 1 | 2 | Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | STE50 | YCL032W | Adaptor protein for various signaling pathways | genetic | 2 | 2 | 2 | Phenotypic Enhancement, Negative Genetic | 
            
                | STE12 | YHR084W | Transcription factor that is activated by a MAPK signaling cascade | genetic | 2 | 2 | 2 | Phenotypic Enhancement, Synthetic Growth Defect | 
            
                | ERP1 | YAR002C-A | Member of the p24 family involved in ER to Golgi transport | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | IRE1 | YHR079C | Serine-threonine kinase and endoribonuclease | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | PMT4 | YJR143C | Protein O-mannosyltransferase | physical | 2 | 1 | 2 | Affinity Capture-Western, Affinity Capture-Western | 
            
                | SEC72 | YLR292C | Non-essential subunit of Sec63 complex | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | HAC1 | YFL031W | Basic leucine zipper (bZIP) transcription factor (ATF/CREB1 homolog) | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | COG8 | YML071C | Component of the conserved oligomeric Golgi complex | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | GIM3 | YNL153C | Subunit of the heterohexameric cochaperone prefoldin complex | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | GSF2 | YML048W | Endoplasmic reticulum (ER) localized integral membrane protein | genetic | 2 | 1 | 1 | Positive Genetic, Positive Genetic | 
            
                | FAR3 | YMR052W | Protein of unknown function | genetic | 2 | 1 | 1 | Positive Genetic, Positive Genetic | 
            
                | GTT1 | YIR038C | ER associated glutathione S-transferase | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | PSD2 | YGR170W | Phosphatidylserine decarboxylase of the Golgi and vacuolar membranes | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | PMT5 | YDL093W | Protein O-mannosyltransferase | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | TOS6 | YNL300W | Glycosylphosphatidylinositol-dependent cell wall protein | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | STE24 | YJR117W | Highly conserved zinc metalloprotease | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | UBC7 | YMR022W | Ubiquitin conjugating enzyme | genetic | 2 | 1 | 1 | Positive Genetic, Positive Genetic | 
            
                | IZH4 | YOL101C | Membrane protein involved in zinc ion homeostasis | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | ATF1 | YOR377W | Alcohol acetyltransferase | genetic | 2 | 1 | 1 | Positive Genetic, Positive Genetic | 
            
                | MSC2 | YDR205W | Endoplasmic reticulum zinc transporter | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | ERG2 | YMR202W | C-8 sterol isomerase | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | DFM1 | YDR411C | Endoplasmic reticulum (ER) localized protein | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | ORM1 | YGR038W | Protein that mediates sphingolipid homeostasis | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | PEX34 | YCL056C | Protein that regulates peroxisome populations | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | EMC10 | YDR056C | Putative protein of unknown function | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | ALG8 | YOR067C | Glucosyl transferase | genetic | 2 | 1 | 1 | Positive Genetic, Positive Genetic | 
            
                | FKH2 | YNL068C | Forkhead family transcription factor | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | GCR1 | YPL075W | Transcriptional activator of genes involved in glycolysis | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | RAP1 | YNL216W | Essential DNA-binding transcription regulator that binds many loci | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | SIN4 | YNL236W | Subunit of the RNA polymerase II mediator complex | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | HSF1 | YGL073W | Trimeric heat shock transcription factor | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | CST6 | YIL036W | Basic leucine zipper (bZIP) transcription factor from ATF/CREB family | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | TUP1 | YCR084C | General repressor of transcription in complex with Cyc8p | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | CDC73 | YLR418C | Component of the Paf1p complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GWT1 | YJL091C | Protein involved in the inositol acylation of GlcN-PI | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | AXL2 | YIL140W | Integral plasma membrane protein | genetic | 1 | 1 | 1 | Dosage Rescue | 
            
                | PEX19 | YDL065C | Chaperone and import receptor for newly-synthesized class I PMPs | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NTR2 | YKR022C | Essential protein that forms a dimer with Ntr1p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | LSM1 | YJL124C | Lsm (Like Sm) protein | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | ECM16 | YMR128W | Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | BEM1 | YBR200W | Protein containing SH3-domains | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CDC24 | YAL041W | Guanine nucleotide exchange factor (GEF) for Cdc42p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CDC10 | YCR002C | Component of the septin ring, required for cytokinesis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | EAF3 | YPR023C | Component of the Rpd3S histone deacetylase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | EMP24 | YGL200C | Component of the p24 complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DHH1 | YDL160C | Cytoplasmic DEAD-box helicase and mRNA decapping activator | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | ACK1 | YDL203C | Protein that functions in the cell wall integrity pathway | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | KRR1 | YCL059C | Nucleolar protein required for rRNA synthesis and ribosomal assembly | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | EHD3 | YDR036C | 3-hydroxyisobutyryl-CoA hydrolase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HRR25 | YPL204W | Conserved casein kinase, monopolin subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | IES5 | YER092W | Non-essential INO80 chromatin remodeling complex subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PDA1 | YER178W | E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PEP4 | YPL154C | Vacuolar aspartyl protease (proteinase A) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MNN10 | YDR245W | Subunit of a Golgi mannosyltransferase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ACE2 | YLR131C | Transcription factor required for septum destruction after cytokinesis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PBS2 | YJL128C | MAP kinase kinase of the HOG signaling pathway | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GET2 | YER083C | Subunit of the GET complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CMK1 | YFR014C | Calmodulin-dependent protein kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ELM1 | YKL048C | Serine/threonine protein kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MOB2 | YFL034C-B | Activator of Cbk1p kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MSB2 | YGR014W | Mucin family member involved in various signaling pathways | genetic | 1 | 1 | 1 | Phenotypic Enhancement | 
            
                | MMR1 | YLR190W | Phosphorylated protein of the mitochondrial outer membrane | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PKC1 | YBL105C | Protein serine/threonine kinase | genetic | 1 | 1 | 1 | Dosage Rescue | 
            
                | PEX14 | YGL153W | Central component of the peroxisomal importomer complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ELP4 | YPL101W | Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MCM1 | YMR043W | Transcription factor | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | BFR1 | YOR198C | Component of mRNP complexes associated with polyribosomes | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | MYO3 | YKL129C | One of two type I myosins | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MOB1 | YIL106W | Component of the mitotic exit network | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HFA1 | YMR207C | Mitochondrial acetyl-coenzyme A carboxylase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MID2 | YLR332W | O-glycosylated plasma membrane protein | genetic | 1 | 1 | 1 | Dosage Rescue | 
            
                | MNN11 | YJL183W | Subunit of a Golgi mannosyltransferase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PMT3 | YOR321W | Protein O-mannosyltransferase | genetic | 1 | 1 | 1 | Synthetic Lethality | 
            
                | PRE9 | YGR135W | Alpha 3 subunit of the 20S proteasome | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | WHI3 | YNL197C | RNA binding protein that modulates mRNA stability | physical | 1 | 1 | 1 | Protein-RNA | 
            
                | VTC4 | YJL012C | Vacuolar membrane polyphosphate polymerase | physical | 1 | 1 | 1 | PCA | 
            
                | SSB1 | YDL229W | Cytoplasmic ATPase that is a ribosome-associated molecular chaperone | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | PUF2 | YPR042C | PUF family mRNA-binding protein | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | PSG1 | YKL077W | Protein that promotes the transport and maturation of Pma1 with Exp1 | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SPF1 | YEL031W | P-type ATPase, ion transporter of the ER membrane | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SLG1 | YOR008C | Sensor-transducer of the stress-activated PKC1-MPK1 kinase pathway | genetic | 1 | 1 | 1 | Dosage Rescue | 
            
                | PMT6 | YGR199W | Protein O-mannosyltransferase | genetic | 1 | 1 | 1 | Phenotypic Enhancement | 
            
                | STE20 | YHL007C | Cdc42p-activated signal transducing kinase | genetic | 1 | 1 | 1 | Phenotypic Enhancement | 
            
                | STE4 | YOR212W | G protein beta subunit | genetic | 1 | 1 | 1 | Phenotypic Enhancement | 
            
                | STE5 | YDR103W | Pheromone-responsive MAPK scaffold protein | genetic | 1 | 1 | 1 | Phenotypic Enhancement | 
            
                | STE11 | YLR362W | Signal transducing MEK kinase | genetic | 1 | 1 | 1 | Phenotypic Enhancement | 
            
                | STE7 | YDL159W | Signal transducing MAP kinase kinase | genetic | 1 | 1 | 1 | Phenotypic Enhancement | 
            
                | PTP2 | YOR208W | Phosphotyrosine-specific phosphatase | genetic | 1 | 1 | 1 | Phenotypic Enhancement | 
            
                | SEC59 | YMR013C | Dolichol kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VPS27 | YNR006W | Endosomal protein that forms a complex with Hse1p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SPT14 | YPL175W | UDP-glycosyltransferase subunit of the GPI-GnT complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VPS8 | YAL002W | Membrane-binding component of the CORVET complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VPS38 | YLR360W | Part of a Vps34p phosphatidylinositol 3-kinase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VPS5 | YOR069W | Nexin-1 homolog | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VPS21 | YOR089C | Endosomal Rab family GTPase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PSA1 | YDL055C | GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SLA1 | YBL007C | Cytoskeletal protein binding protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SSS1 | YDR086C | Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SNU56 | YDR240C | Component of U1 snRNP required for mRNA splicing via spliceosome | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPN11 | YFR004W | Metalloprotease subunit of 19S regulatory particle | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | STT3 | YGL022W | Catalytic subunit of the oligosaccharyltransferase complex of the ER l | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SEC61 | YLR378C | Conserved ER protein translocation channel | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ROT1 | YMR200W | Molecular chaperone involved in protein folding in ER | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SEC63 | YOR254C | Essential subunit of Sec63 complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | QRI7 | YDL104C | Protein involved in threonylcarbamoyl adenosine biosynthesis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YDL180W | YDL180W | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | UBC5 | YDR059C | Ubiquitin-conjugating enzyme | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPA14 | YDR156W | RNA polymerase I subunit A14 | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SAC7 | YDR389W | GTPase activating protein (GAP) for Rho1p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SHE10 | YGL228W | Protein involved in outer spore wall assembly | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YIL055C | YIL055C | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YJL132W | YJL132W | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ROM2 | YLR371W | Guanine nucleotide exchange factor (GEF) for Rho1p and Rho2p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SEG1 | YMR086W | Component of eisosome required for proper eisosome assembly | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPL36A | YMR194W | Ribosomal 60S subunit protein L36A | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SSP2 | YOR242C | Sporulation specific protein that localizes to the spore wall | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YTA6 | YPL074W | Putative ATPase of the CDC48/PAS1/SEC18 (AAA) family | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YPR089W | YPR089W | Protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SKI3 | YPR189W | Ski complex component and TPR protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DPM1 | YPR183W | Dolichol phosphate mannose (Dol-P-Man) synthase of ER membrane | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | FRA1 | YLL029W | Protein involved in negative regulation of iron regulon transcription | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CSF1 | YLR087C | Protein with structural similarity to lipid transport protein Vps13p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ATG32 | YIL146C | Mitochondrial outer membrane protein required to initiate mitophagy | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | FMS1 | YMR020W | Polyamine oxidase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MUB1 | YMR100W | MYND domain-containing protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GPI17 | YDR434W | Transmembrane protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | OPY2 | YPR075C | Integral membrane protein that acts as a membrane anchor for Ste50p | genetic | 1 | 1 | 1 | Phenotypic Enhancement | 
            
                | APJ1 | YNL077W | Hsp40 chaperone with a role in SUMO-mediated protein degradation | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | ARV1 | YLR242C | Cortical ER protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GPI12 | YMR281W | ER membrane protein involved in the second step of GPI anchor assembly | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HUR1 | YGL168W | Protein with a role in DNA repair | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MPS3 | YJL019W | Nuclear envelope protein | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | ERD1 | YDR414C | Predicted membrane protein required for lumenal ER protein retention | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | JHD1 | YER051W | JmjC domain family histone demethylase specific for H3-K36 | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GPI8 | YDR331W | Catalytic subunit of the ER membrane GPI transamidase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PER1 | YCR044C | Protein of the endoplasmic reticulum | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ENV9 | YOR246C | Conserved oxidoreductase involved in lipid droplet morphology | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CIS1 | YLR346C | Protein of unknown function found in mitochondria | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | OPI10 | YOL032W | Protein with a possible role in phospholipid biosynthesis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | IRS4 | YKR019C | EH domain-containing protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | OCA6 | YDR067C | Cytoplasmic protein required for replication of Brome mosaic virus | genetic | 1 | 1 | 1 | Negative Genetic |