GEnome-wide tool for Multi-scale Modeling
data Extraction and Representation
for Saccharomyces cerevisiae

List of interactors

Use the search utility to find the interactor you are looking for. By clicking the column headers the table will be sorted on that column. Use shift+click to sort on multiple columns. Default sorting is on number of experiments, number of unique methods and the number of publications, and alphabetical on standard name, in that order.

Standard name	Systematic name	Name description	Type	#Experiments	#Methods	#Publications	Evidence
FKH2	YNL068C	Forkhead family transcription factor	regulation	2	2	2	chromatin immunoprecipitation- exonuclease evidence, ChEC-Seq experiments
HSP30	YCR021C	Negative regulator of the H(+)-ATPase Pma1p	regulation	2	2	2	chromatin immunoprecipitation-chip evidence, DNA to cDNA expression microarray evidence
TOP1	YOL006C	Topoisomerase I	genetic	2	2	2	Negative Genetic, Synthetic Growth Defect
RPS3	YNL178W	Protein component of the small (40S) ribosomal subunit	regulation	2	1	2	chromatin immunoprecipitation-chip evidence, chromatin immunoprecipitation-chip evidence
PIG2	YIL045W	Putative type-1 protein phosphatase targeting subunit	regulation	2	1	2	chromatin immunoprecipitation-chip evidence, chromatin immunoprecipitation-chip evidence
SMI1	YGR229C	Protein involved in the regulation of cell wall synthesis	physical	2	1	2	Two-hybrid, Two-hybrid
DHH1	YDL160C	Cytoplasmic DEAD-box helicase and mRNA decapping activator	physical	2	1	2	Affinity Capture-RNA, Affinity Capture-RNA
PHO80	YOL001W	Cyclin	genetic	2	1	2	Negative Genetic, Negative Genetic
CMK2	YOL016C	Calmodulin-dependent protein kinase	genetic	2	1	2	Negative Genetic, Negative Genetic
OMS1	YDR316W	Protein integral to the mitochondrial membrane	genetic	2	1	2	Negative Genetic, Negative Genetic
COX23	YHR116W	Protein that functions in mitochondrial copper homeostasis	genetic	2	1	2	Negative Genetic, Negative Genetic
YJL206C	YJL206C	Putative protein of unknown function	genetic	2	1	2	Negative Genetic, Negative Genetic
HTZ1	YOL012C	Histone variant H2AZ	genetic	2	1	2	Negative Genetic, Negative Genetic
SIN3	YOL004W	Component of both the Rpd3S and Rpd3L histone deacetylase complexes	genetic	2	1	2	Negative Genetic, Negative Genetic
BDF1	YLR399C	BET family transcriptional regulator	genetic	2	2	1	Synthetic Rescue, Phenotypic Suppression
ELC1	YPL046C	Elongin C, conserved among eukaryotes	physical	2	2	1	Two-hybrid, Reconstituted Complex
SFP1	YLR403W	Regulates transcription of ribosomal protein and biogenesis genes	regulation	1	1	1	DNA to cDNA expression microarray evidence
SPT10	YJL127C	Histone H3 acetylase with a role in transcriptional regulation	regulation	1	1	1	DNA to cDNA expression microarray evidence
YAP6	YDR259C	Basic leucine zipper (bZIP) transcription factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RIB3	YDR487C	3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ACB1	YGR037C	Acyl-CoA-binding protein	regulation	1	1	1	DNA to cDNA expression microarray evidence
FAS2	YPL231W	Alpha subunit of fatty acid synthetase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ACA1	YER045C	ATF/CREB family basic leucine zipper (bZIP) transcription factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CIN5	YOR028C	Basic leucine zipper (bZIP) transcription factor of the yAP-1 family	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
FAS1	YKL182W	Beta subunit of fatty acid synthetase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
GNP1	YDR508C	Broad specificity amino acid permease	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
AGP1	YCL025C	Broad-specificity, low-affinity amino acid permease	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YPP1	YGR198W	Cargo-transport protein involved in endocytosis	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
VID30	YGL227W	Central component of GID Complex, involved in FBPase degradation	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
VPS25	YJR102C	Component of the ESCRT-II complex	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
VPS53	YJL029C	Component of the GARP (Golgi-associated retrograde protein) complex	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TAO3	YIL129C	Component of the RAM signaling network	regulation	1	1	1	DNA to cDNA expression microarray evidence
EST3	YIL009C-A	Component of the telomerase holoenzyme	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CUP2	YGL166W	Copper-binding transcription factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SMX3	YPR182W	Core Sm protein Sm F	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PHO81	YGR233C	Cyclin-dependent kinase (CDK) inhibitor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CYT2	YKL087C	Cytochrome c1 heme lyase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TRX1	YLR043C	Cytoplasmic thioredoxin isoenzyme	regulation	1	1	1	DNA to cDNA expression microarray evidence
HPA3	YEL066W	D-Amino acid N-acetyltransferase that detoxifies D-amino acids	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TAH11	YJR046W	DNA replication licensing factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
BSC3	YLR465C	Dubious open reading frame	regulation	1	1	1	DNA to cDNA expression microarray evidence
YLR463C	YLR463C	Dubious open reading frame	regulation	1	1	1	DNA to cDNA expression microarray evidence
YKL177W	YKL177W	Dubious open reading frame	regulation	1	1	1	DNA to cDNA expression microarray evidence
ATP15	YPL271W	Epsilon subunit of the F1 sector of mitochondrial F1F0 ATP synthase	regulation	1	1	1	DNA to cDNA expression microarray evidence
YPR063C	YPR063C	ER-localized protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TCB2	YNL087W	ER protein involved in ER-plasma membrane tethering	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TIM10	YHR005C-A	Essential protein of the mitochondrial intermembrane space	regulation	1	1	1	DNA to cDNA expression microarray evidence
PGA2	YNL149C	Essential protein required for maturation of Gas1p and Pho8p	regulation	1	1	1	DNA to cDNA expression microarray evidence
POX1	YGL205W	Fatty-acyl coenzyme A oxidase	regulation	1	1	1	DNA to cDNA expression microarray evidence
FRE4	YNR060W	Ferric reductase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
FRE1	YLR214W	Ferric reductase and cupric reductase	regulation	1	1	1	DNA to cDNA expression microarray evidence
FBP1	YLR377C	Fructose-1,6-bisphosphatase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PRO1	YDR300C	Gamma-glutamyl kinase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
GAP1	YKR039W	General amino acid permease	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ROT2	YBR229C	Glucosidase II catalytic subunit	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TDH3	YGR192C	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 3	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
GSY1	YFR015C	Glycogen synthase	regulation	1	1	1	DNA to cDNA expression microarray evidence
ROX1	YPR065W	Heme-dependent repressor of hypoxic genes	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HXK2	YGL253W	Hexokinase isoenzyme 2	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
KAE1	YKR038C	Highly conserved ATPase of HSP70/DnaK family	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
STE24	YJR117W	Highly conserved zinc metalloprotease	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
LMO1	YLL007C	Homolog of mammalian ELMO (Engulfment and celL MOtility)	regulation	1	1	1	DNA to cDNA expression microarray evidence
MIA40	YKL195W	Import and assembly protein in mitochondrial intermembrane space	regulation	1	1	1	DNA to cDNA expression microarray evidence
TSL1	YML100W	Large subunit of trehalose 6-phosphate synthase/phosphatase complex	regulation	1	1	1	DNA to cDNA expression microarray evidence
FAA4	YMR246W	Long chain fatty acyl-CoA synthetase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PDC1	YLR044C	Major of three pyruvate decarboxylase isozymes	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
FIT2	YOR382W	Mannoprotein that is incorporated into the cell wall	regulation	1	1	1	DNA to cDNA expression microarray evidence
MF(ALPHA)2	YGL089C	Mating pheromone alpha-factor, made by alpha cells	regulation	1	1	1	DNA to cDNA expression microarray evidence
SPO73	YER046W	Meiosis-specific protein required for prospore membrane morphogenesis	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YAR029W	YAR029W	Member of DUP240 gene family but contains no transmembrane domains	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ERP1	YAR002C-A	Member of the p24 family involved in ER to Golgi transport	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
VPS8	YAL002W	Membrane-binding component of the CORVET complex	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MHP1	YJL042W	Microtubule-associated protein involved in microtubule organization	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
URA8	YJR103W	Minor CTP synthase isozyme (see also URA7)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ADH3	YMR083W	Mitochondrial alcohol dehydrogenase isozyme III	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YTA12	YMR089C	Mitochondrial inner membrane m-AAA protease component	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MRX10	YDR282C	Mitochondrial inner membrane protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ACP1	YKL192C	Mitochondrial matrix acyl carrier protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MSM1	YGR171C	Mitochondrial methionyl-tRNA synthetase (MetRS)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RSM7	YJR113C	Mitochondrial ribosomal protein of the small subunit	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
AMN1	YBR158W	Modulator of cell separation and mitotic exit	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ATR1	YML116W	Multidrug efflux pump of the major facilitator superfamily	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
GPD2	YOL059W	NAD-dependent glycerol 3-phosphate dehydrogenase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
NPY1	YGL067W	NADH diphosphatase (pyrophosphatase)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
NMA2	YGR010W	Nicotinic acid mononucleotide adenylyltransferase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YHB1	YGR234W	Nitric oxide oxidoreductase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MAK10	YEL053C	Non-catalytic subunit of the NatC N-terminal acetyltransferase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RHO2	YNL090W	Non-essential small GTPase of the Rho/Rac family of Ras-like proteins	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RHO3	YIL118W	Non-essential small GTPase of the Rho/Rac family of Ras-like proteins	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RHO5	YNL180C	Non-essential small GTPase of the Rho/Rac family of Ras-like proteins	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
DOT1	YDR440W	Nucleosomal histone H3-Lys79 methylase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MET17	YLR303W	O-acetyl homoserine-O-acetyl serine sulfhydrylase	regulation	1	1	1	DNA to cDNA expression microarray evidence
HSP150	YJL159W	O-mannosylated heat shock protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
URA3	YEL021W	Orotidine-5'-phosphate (OMP) decarboxylase	regulation	1	1	1	DNA to cDNA expression microarray evidence
ZEO1	YOL109W	Peripheral membrane protein of the plasma membrane	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TIP20	YGL145W	Peripheral membrane protein required for COPI vesicle fusion to the ER	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PCL7	YIL050W	Pho85p cyclin of the Pho80p subfamily	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PGM1	YKL127W	Phosphoglucomutase, minor isoform	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
GPX1	YKL026C	Phospholipid hydroperoxide glutathione peroxidase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PHO89	YBR296C	Plasma membrane Na+/Pi cotransporter	regulation	1	1	1	DNA to cDNA expression microarray evidence
PMA1	YGL008C	Plasma membrane P2-type H+-ATPase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
FLR1	YBR008C	Plasma membrane transporter of the major facilitator superfamily	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TPO4	YOR273C	Polyamine transporter of the major facilitator superfamily	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
APT2	YDR441C	Potential adenine phosphoribosyltransferase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
DFG16	YOR030W	Probable multiple transmembrane protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HSL7	YBR133C	Protein arginine N-methyltransferase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RPS10B	YMR230W	Protein component of the small (40S) ribosomal subunit	regulation	1	1	1	DNA to cDNA expression microarray evidence
RPS29A	YLR388W	Protein component of the small (40S) ribosomal subunit	regulation	1	1	1	DNA to cDNA expression microarray evidence
RPS29B	YDL061C	Protein component of the small (40S) ribosomal subunit	regulation	1	1	1	DNA to cDNA expression microarray evidence
RPS30A	YLR287C-A	Protein component of the small (40S) ribosomal subunit	regulation	1	1	1	DNA to cDNA expression microarray evidence
RPS7B	YNL096C	Protein component of the small (40S) ribosomal subunit	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RPS4A	YJR145C	Protein component of the small (40S) ribosomal subunit	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
COA6	YMR244C-A	Protein involved in cytochrome c oxidase (Complex IV) assembly	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MAM3	YOL060C	Protein involved in magnesium homeostasis	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SND1	YDR186C	Protein involved in SRP-independent targeting of substrates to the ER	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
VPS45	YGL095C	Protein of the Sec1p/Munc-18 family	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
NCE101	YJL205C	Protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MTC6	YHR151C	Protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
AIM17	YHL021C	Protein of unknown function	regulation	1	1	1	DNA to cDNA expression microarray evidence
CSS1	YIL169C	Protein of unknown function, secreted when constitutively expressed	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YDR514C	YDR514C	Protein of unknown function that localizes to mitochondria	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MNN14	YJR061W	Protein required for N-glycan mannosylphosphorylation	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
URB2	YJR041C	Protein required for normal metabolism of the rRNA primary transcript	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MGA1	YGR249W	Protein similar to heat shock transcription factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SBP1	YHL034C	Protein that binds eIF4G and has a role in repression of translation	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
AFG1	YEL052W	Protein that may act as a chaperone for cytochrome c oxidase subunits	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
KEL2	YGR238C	Protein that negatively regulates mitotic exit	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
KTI12	YKL110C	Protein that plays a role in modification of tRNA wobble nucleosides	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YRO2	YBR054W	Protein with a putative role in response to acid stress	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HMS2	YJR147W	Protein with similarity to heat shock transcription factors	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
AAD3	YCR107W	Putative aryl-alcohol dehydrogenase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YLR126C	YLR126C	Putative glutamine amidotransferase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MMT1	YMR177W	Putative metal transporter involved in mitochondrial iron accumulation	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YAL037C-A	YAL037C-A	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YEL076C-A	YEL076C-A	Putative protein of unknown function	regulation	1	1	1	DNA to cDNA expression microarray evidence
YBR090C	YBR090C	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YIR018C-A	YIR018C-A	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YGL007C-A	YGL007C-A	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YGL006W-A	YGL006W-A	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YBR053C	YBR053C	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YLR464W	YLR464W	Putative protein of unknown function	regulation	1	1	1	DNA to cDNA expression microarray evidence
YDR338C	YDR338C	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YHR214W	YHR214W	Putative protein of unknown function	regulation	1	1	1	DNA to cDNA expression microarray evidence
YMR090W	YMR090W	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YLR001C	YLR001C	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YAL037W	YAL037W	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YLR415C	YLR415C	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YLL054C	YLL054C	Putative protein of unknown function with similarity to Pip2p	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SDD4	YPR022C	Putative transcription factor, as suggested by computational analysis	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CMR3	YPR013C	Putative zinc finger protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
STE3	YKL178C	Receptor for a factor pheromone	regulation	1	1	1	DNA to cDNA expression microarray evidence
GAC1	YOR178C	Regulatory subunit for Glc7p type-1 protein phosphatase (PP1)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
VTC2	YFL004W	Regulatory subunit of the vacuolar transporter chaperone (VTC) complex	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RPL14B	YHL001W	Ribosomal 60S subunit protein L14B	regulation	1	1	1	DNA to cDNA expression microarray evidence
RPL21A	YBR191W	Ribosomal 60S subunit protein L21A	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RPL26B	YGR034W	Ribosomal 60S subunit protein L26B	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RPL29	YFR032C-A	Ribosomal 60S subunit protein L29	regulation	1	1	1	DNA to cDNA expression microarray evidence
RPL33B	YOR234C	Ribosomal 60S subunit protein L33B	regulation	1	1	1	DNA to cDNA expression microarray evidence
RPL37A	YLR185W	Ribosomal 60S subunit protein L37A	regulation	1	1	1	DNA to cDNA expression microarray evidence
RPL41A	YDL184C	Ribosomal 60S subunit protein L41A	regulation	1	1	1	DNA to cDNA expression microarray evidence
RPL41B	YDL133C-A	Ribosomal 60S subunit protein L41B	regulation	1	1	1	DNA to cDNA expression microarray evidence
RPL42A	YNL162W	Ribosomal 60S subunit protein L42A	regulation	1	1	1	DNA to cDNA expression microarray evidence
RPS23A	YGR118W	Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
NOP19	YGR251W	Ribosome biogenesis factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RIE1	YGR250C	RNA binding protein and negative regulator of START	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CFT1	YDR301W	RNA-binding subunit of the mRNA cleavage and polyadenylation factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
AIR2	YDL175C	RNA-binding subunit of the TRAMP nuclear RNA surveillance complex	regulation	1	1	1	DNA to cDNA expression microarray evidence
RPB10	YOR210W	RNA polymerase subunit ABC10-beta	regulation	1	1	1	DNA to cDNA expression microarray evidence
RPB5	YBR154C	RNA polymerase subunit ABC27	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ISF1	YMR081C	Serine-rich, hydrophilic protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CBK1	YNL161W	Serine/threonine protein kinase of the the RAM signaling network	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SET6	YPL165C	SET domain protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HSP42	YDR171W	Small heat shock protein (sHSP) with chaperone activity	regulation	1	1	1	DNA to cDNA expression microarray evidence
HSP26	YBR072W	Small heat shock protein (sHSP) with chaperone activity	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HAL5	YJL165C	Snf1p-related nutrient-responsive protein kinase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SBH2	YER019C-A	Ssh1p-Sss1p-Sbh2p complex component	regulation	1	1	1	DNA to cDNA expression microarray evidence
LAM6	YLR072W	Sterol transporter that transfers sterols between membranes	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TOF1	YNL273W	Subunit of a replication-pausing checkpoint complex	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
NOP10	YHR072W-A	Subunit of box H/ACA snoRNP complex	regulation	1	1	1	DNA to cDNA expression microarray evidence
CCT6	YDR188W	Subunit of the cytosolic chaperonin Cct ring complex	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SSS1	YDR086C	Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p)	regulation	1	1	1	DNA to cDNA expression microarray evidence
SRX1	YKL086W	Sulfiredoxin	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CST9	YLR394W	SUMO E3 ligase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MSN1	YOL116W	Transcriptional activator	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PHD1	YKL043W	Transcriptional activator that enhances pseudohyphal growth	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
WTM1	YOR230W	Transcriptional modulator	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MIG3	YER028C	Transcriptional regulator	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HAP4	YKL109W	Transcription factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PDR8	YLR266C	Transcription factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RPI1	YIL119C	Transcription factor, allelic differences between S288C and Sigma1278b	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SEC9	YGR009C	t-SNARE protein required for secretory vesicle-plasma membrane fusion	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RIP1	YEL024W	Ubiquinol-cytochrome-c reductase	regulation	1	1	1	DNA to cDNA expression microarray evidence
SMT3	YDR510W	Ubiquitin-like protein of the SUMO family	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PMC1	YGL006W	Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
XPT1	YJR133W	Xanthine-guanine phosphoribosyl transferase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CHA4	YLR098C	DNA binding transcriptional activator	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RPD3	YNL330C	Histone deacetylase, component of both the Rpd3S and Rpd3L complexes	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PHD1	YKL043W	Transcriptional activator that enhances pseudohyphal growth	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
AXL2	YIL140W	Integral plasma membrane protein	genetic	1	1	1	Negative Genetic
CCR4	YAL021C	Component of the CCR4-NOT transcriptional complex	physical	1	1	1	Affinity Capture-RNA
BMS1	YPL217C	GTPase required for ribosomal subunit synthesis and rRNA processing	genetic	1	1	1	Negative Genetic
ARP2	YDL029W	Essential component of the Arp2/3 complex	genetic	1	1	1	Negative Genetic
CDC28	YBR160W	Cyclin-dependent kinase (CDK) catalytic subunit	genetic	1	1	1	Dosage Lethality
BUD31	YCR063W	Component of the SF3b subcomplex of the U2 snRNP	genetic	1	1	1	Negative Genetic
BDH2	YAL061W	Putative medium-chain alcohol dehydrogenase with similarity to BDH1	genetic	1	1	1	Negative Genetic
IRC20	YLR247C	E3 ubiquitin ligase and putative helicase	physical	1	1	1	Affinity Capture-MS
TMA22	YJR014W	Protein of unknown function	physical	1	1	1	Affinity Capture-MS
MCK1	YNL307C	Dual-specificity ser/thr and tyrosine protein kinase	physical	1	1	1	Biochemical Activity
PTK2	YJR059W	Serine/threonine protein kinase	physical	1	1	1	Biochemical Activity
PTK2	YJR059W	Serine/threonine protein kinase	genetic	1	1	1	Negative Genetic
STE20	YHL007C	Cdc42p-activated signal transducing kinase	physical	1	1	1	Biochemical Activity
VMA6	YLR447C	Subunit d of the V0 integral membrane domain of V-ATPase	physical	1	1	1	Two-hybrid
MCM16	YPR046W	Component of the Ctf19 complex and the COMA subcomplex	physical	1	1	1	Two-hybrid
RMR1	YGL250W	Protein required for meiotic recombination and gene conversion	physical	1	1	1	Two-hybrid
HEK2	YBL032W	RNA binding protein involved in asymmetric localization of ASH1 mRNA	physical	1	1	1	Affinity Capture-RNA
LOT6	YLR011W	FMN-dependent NAD(P)H:quinone reductase	physical	1	1	1	Reconstituted Complex
NAB2	YGL122C	Nuclear polyadenylated RNA-binding protein	physical	1	1	1	Affinity Capture-RNA
VHS1	YDR247W	Cytoplasmic serine/threonine protein kinase	physical	1	1	1	Affinity Capture-MS
CYC8	YBR112C	General transcriptional co-repressor	physical	1	1	1	Affinity Capture-Western
TUP1	YCR084C	General repressor of transcription in complex with Cyc8p	physical	1	1	1	Affinity Capture-Western
NDL1	YLR254C	Homolog of nuclear distribution factor NudE	physical	1	1	1	Two-hybrid
NDL1	YLR254C	Homolog of nuclear distribution factor NudE	genetic	1	1	1	Negative Genetic
MLH3	YPL164C	Protein involved in DNA mismatch repair and meiotic recombination	physical	1	1	1	Affinity Capture-MS
HOG1	YLR113W	Mitogen-activated protein kinase involved in osmoregulation	genetic	1	1	1	Dosage Rescue
PAC10	YGR078C	Part of the heteromeric co-chaperone GimC/prefoldin complex	genetic	1	1	1	Synthetic Rescue
PFK1	YGR240C	Alpha subunit of heterooctameric phosphofructokinase	genetic	1	1	1	Negative Genetic
PLB3	YOL011W	Phospholipase B (lysophospholipase) involved in lipid metabolism	genetic	1	1	1	Negative Genetic
TSC13	YDL015C	Enoyl reductase	genetic	1	1	1	Negative Genetic
VTC1	YER072W	Regulatory subunit of the vacuolar transporter chaperone (VTC) complex	genetic	1	1	1	Negative Genetic
UBC6	YER100W	Ubiquitin-conjugating enzyme involved in ERAD	genetic	1	1	1	Negative Genetic
QCR8	YJL166W	Subunit 8 of ubiquinol cytochrome-c reductase (Complex III)	genetic	1	1	1	Negative Genetic
MSC1	YML128C	Protein of unknown function	genetic	1	1	1	Negative Genetic
RRP6	YOR001W	Nuclear exosome exonuclease component	genetic	1	1	1	Negative Genetic
SIP4	YJL089W	C6 zinc cluster transcriptional activator	genetic	1	1	1	Negative Genetic
SNT1	YCR033W	Set3C histone deacetylase scaffold	genetic	1	1	1	Negative Genetic
LEO1	YOR123C	Component of the Paf1 complex	genetic	1	1	1	Negative Genetic
IES1	YFL013C	Subunit of the INO80 chromatin remodeling complex	genetic	1	1	1	Negative Genetic
UBP3	YER151C	Ubiquitin-specific protease that cleaves Ub-protein fusions	genetic	1	1	1	Negative Genetic
SRS2	YJL092W	DNA helicase and DNA-dependent ATPase	genetic	1	1	1	Dosage Lethality
SOK2	YMR016C	Nuclear protein that negatively regulates pseudohyphal differentiation	genetic	1	1	1	Positive Genetic
KCS1	YDR017C	Inositol hexakisphosphate and inositol heptakisphosphate kinase	genetic	1	1	1	Negative Genetic
RSC2	YLR357W	Component of the RSC chromatin remodeling complex	genetic	1	1	1	Negative Genetic
RTG3	YBL103C	bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways	genetic	1	1	1	Negative Genetic
MET18	YIL128W	Component of cytosolic iron-sulfur protein assembly (CIA) machinery	genetic	1	1	1	Negative Genetic
VPS71	YML041C	Nucleosome-binding component of the SWR1 complex	genetic	1	1	1	Positive Genetic
RAD52	YML032C	Protein involved in homologous recombination	genetic	1	1	1	Positive Genetic
RAD51	YER095W	Strand exchange protein	genetic	1	1	1	Positive Genetic
SSN3	YPL042C	Component of the RNA polymerase II mediator complex	genetic	1	1	1	Negative Genetic
CLN1	YMR199W	G1 cyclin involved in regulation of the cell cycle	genetic	1	1	1	Negative Genetic
REB1	YBR049C	RNA polymerase I enhancer binding protein	genetic	1	1	1	Positive Genetic
GRS1	YBR121C	Cytoplasmic and mitochondrial glycyl-tRNA synthase	genetic	1	1	1	Positive Genetic
MOB2	YFL034C-B	Activator of Cbk1p kinase	genetic	1	1	1	Positive Genetic
UGP1	YKL035W	UDP-glucose pyrophosphorylase (UGPase)	genetic	1	1	1	Positive Genetic
MRPL27	YBR282W	Mitochondrial ribosomal protein of the large subunit	genetic	1	1	1	Positive Genetic
TFB5	YDR079C-A	Component of RNA polymerase II general transcription factor TFIIH	genetic	1	1	1	Positive Genetic
EKI1	YDR147W	Ethanolamine kinase	genetic	1	1	1	Positive Genetic
PET117	YER058W	Assembly factor that couples heme a synthesis to complex IV assembly	genetic	1	1	1	Positive Genetic
RPS8B	YER102W	Protein component of the small (40S) ribosomal subunit	genetic	1	1	1	Positive Genetic
RPL23B	YER117W	Ribosomal 60S subunit protein L23B	genetic	1	1	1	Positive Genetic
YER187W	YER187W	Putative protein of unknown function	genetic	1	1	1	Positive Genetic
ROF1	YHR177W	Putative transcription factor containing a WOPR domain	genetic	1	1	1	Positive Genetic
SEC28	YIL076W	Epsilon-COP subunit of the coatomer	genetic	1	1	1	Positive Genetic
TCB3	YML072C	Cortical ER protein involved in ER-plasma membrane tethering	genetic	1	1	1	Positive Genetic
ICS2	YBR157C	Protein of unknown function	genetic	1	1	1	Positive Genetic
ENV9	YOR246C	Conserved oxidoreductase involved in lipid droplet morphology	genetic	1	1	1	Positive Genetic
YPL039W	YPL039W	Putative protein of unknown function	genetic	1	1	1	Positive Genetic
RSP5	YER125W	NEDD4 family E3 ubiquitin ligase	genetic	1	1	1	Negative Genetic
ESS1	YJR017C	Peptidylprolyl-cis/trans-isomerase (PPIase)	genetic	1	1	1	Negative Genetic
GPI13	YLL031C	ER membrane localized phosphoryltransferase	genetic	1	1	1	Negative Genetic
RSC58	YLR033W	Component of the RSC chromatin remodeling complex	genetic	1	1	1	Negative Genetic
POL1	YNL102W	Catalytic subunit of the DNA polymerase I alpha-primase complex	genetic	1	1	1	Negative Genetic
RRS1	YOR294W	Essential protein that binds ribosomal protein L11	genetic	1	1	1	Negative Genetic
HRR25	YPL204W	Conserved casein kinase, monopolin subunit	genetic	1	1	1	Negative Genetic
HAP3	YBL021C	Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex	genetic	1	1	1	Negative Genetic
YCR102C	YCR102C	Putative quinone oxidoreductase	genetic	1	1	1	Negative Genetic
ENT1	YDL161W	Epsin-like protein involved in endocytosis and actin patch assembly	genetic	1	1	1	Negative Genetic
TMS1	YDR105C	Vacuolar membrane protein of unknown function	genetic	1	1	1	Negative Genetic
SSN2	YDR443C	Subunit of the RNA polymerase II mediator complex	genetic	1	1	1	Negative Genetic
ICP55	YER078C	Mitochondrial aminopeptidase	genetic	1	1	1	Negative Genetic
IES5	YER092W	Non-essential INO80 chromatin remodeling complex subunit	genetic	1	1	1	Negative Genetic
EDC1	YGL222C	RNA-binding protein that activates mRNA decapping directly	genetic	1	1	1	Negative Genetic
NAS2	YIL007C	Evolutionarily conserved 19S regulatory particle assembly-chaperone	genetic	1	1	1	Negative Genetic
YVH1	YIR026C	Dual specificity protein phosphatase	genetic	1	1	1	Negative Genetic
YJR149W	YJR149W	Putative protein of unknown function	genetic	1	1	1	Negative Genetic
RPL40B	YKR094C	Ubiquitin-ribosomal 60S subunit protein L40B fusion protein	genetic	1	1	1	Negative Genetic
PTC1	YDL006W	Type 2C protein phosphatase (PP2C)	genetic	1	1	1	Dosage Rescue
GRX5	YPL059W	Glutathione-dependent oxidoreductase	genetic	1	1	1	Synthetic Growth Defect
MRPL10	YNL284C	Mitochondrial ribosomal protein of the large subunit	genetic	1	1	1	Negative Genetic
HTA2	YBL003C	Histone H2A	genetic	1	1	1	Negative Genetic
MRX18	YBR056W	Putative glycoside hydrolase of the mitochondrial intermembrane space	genetic	1	1	1	Negative Genetic
YSA1	YBR111C	Nudix hydrolase family member with ADP-ribose pyrophosphatase activity	genetic	1	1	1	Negative Genetic
TRM1	YDR120C	tRNA methyltransferase	genetic	1	1	1	Negative Genetic
LSM6	YDR378C	Lsm (Like Sm) protein	genetic	1	1	1	Negative Genetic
MIG1	YGL035C	Transcription factor involved in glucose repression	genetic	1	1	1	Negative Genetic
TOS3	YGL179C	Protein kinase	genetic	1	1	1	Negative Genetic
UPF3	YGR072W	Component of the nonsense-mediated mRNA decay (NMD) pathway	genetic	1	1	1	Negative Genetic
DBF2	YGR092W	Ser/Thr kinase involved in transcription and stress response	genetic	1	1	1	Negative Genetic
UBR1	YGR184C	E3 ubiquitin ligase (N-recognin)	genetic	1	1	1	Negative Genetic
PMT6	YGR199W	Protein O-mannosyltransferase	genetic	1	1	1	Negative Genetic
VID28	YIL017C	GID Complex subunit, serves as adaptor for regulatory subunit Vid24p	genetic	1	1	1	Negative Genetic
VHS2	YIL135C	Regulator of septin dynamics	genetic	1	1	1	Negative Genetic
DAL2	YIR029W	Allantoicase	genetic	1	1	1	Negative Genetic
YJL043W	YJL043W	Putative protein of unknown function	genetic	1	1	1	Negative Genetic
YJR084W	YJR084W	Protein that forms a complex with Thp3p	genetic	1	1	1	Negative Genetic
DBP7	YKR024C	Putative ATP-dependent RNA helicase of the DEAD-box family	genetic	1	1	1	Negative Genetic
CSF1	YLR087C	Protein with structural similarity to lipid transport protein Vps13p	genetic	1	1	1	Negative Genetic
FMP27	YLR454W	Protein with structural similarity to lipid transport protein Vps13p	genetic	1	1	1	Negative Genetic
GIS4	YML006C	CAAX box containing protein of unknown function	genetic	1	1	1	Negative Genetic
ERG6	YML008C	Delta(24)-sterol C-methyltransferase	genetic	1	1	1	Negative Genetic
NUP188	YML103C	Subunit of the inner ring of the nuclear pore complex (NPC)	genetic	1	1	1	Negative Genetic
TGS1	YPL157W	Trimethyl guanosine synthase, conserved nucleolar methyl transferase	genetic	1	1	1	Negative Genetic
YPL150W	YPL150W	Protein kinase of unknown cellular role	genetic	1	1	1	Negative Genetic
HOB2	YPR117W	Protein with structural similarity to lipid transport protein Vps13p	genetic	1	1	1	Negative Genetic
DBP5	YOR046C	Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family	genetic	1	1	1	Synthetic Growth Defect
AFT1	YGL071W	Transcription factor involved in iron utilization and homeostasis	genetic	1	1	1	Positive Genetic
ASK10	YGR097W	Regulator of the Fps1p glycerol channel	genetic	1	1	1	Negative Genetic
BUB1	YGR188C	Protein kinase involved in the cell cycle checkpoint into anaphase	genetic	1	1	1	Positive Genetic
AQY3	YFL054C	Putative channel-like protein	genetic	1	1	1	Positive Genetic
CBS1	YDL069C	Mitochondrial translational activator of the COB mRNA	genetic	1	1	1	Positive Genetic
APJ1	YNL077W	Hsp40 chaperone with a role in SUMO-mediated protein degradation	physical	1	1	1	Affinity Capture-MS
APS2	YJR058C	Small subunit of the clathrin-associated adaptor complex AP-2	genetic	1	1	1	Negative Genetic
CDC50	YCR094W	Endosomal protein that interacts with phospholipid flippase Drs2p	genetic	1	1	1	Negative Genetic
AIM19	YIL087C	Protein of unknown function	genetic	1	1	1	Negative Genetic