| SRB4 |
YER022W |
Subunit of the RNA polymerase II mediator complex |
physical |
26 |
4 |
20 |
Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Co-purification, Co-purification, Co-purification, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Reconstituted Complex, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS |
| MED8 |
YBR193C |
Subunit of the RNA polymerase II mediator complex |
physical |
17 |
6 |
17 |
Two-hybrid, Affinity Capture-Western, Affinity Capture-MS, Two-hybrid, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Co-crystal Structure, Co-purification, Affinity Capture-Western, Affinity Capture-MS, Reconstituted Complex, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western |
| MED7 |
YOL135C |
Subunit of the RNA polymerase II mediator complex |
physical |
15 |
3 |
15 |
Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS |
| GAL11 |
YOL051W |
Subunit of the RNA polymerase II mediator complex |
physical |
15 |
3 |
13 |
Affinity Capture-Western, Affinity Capture-MS, Co-purification, Co-purification, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western |
| RGR1 |
YLR071C |
Subunit of the RNA polymerase II mediator complex |
physical |
14 |
3 |
13 |
Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western |
| SRB2 |
YHR041C |
Subunit of the RNA polymerase II mediator complex |
physical |
14 |
5 |
12 |
Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Co-crystal Structure, Co-purification, Affinity Capture-MS, Reconstituted Complex, Affinity Capture-Western, Affinity Capture-Western |
| MED1 |
YPR070W |
Subunit of the RNA polymerase II mediator complex |
physical |
12 |
3 |
11 |
Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western |
| MED2 |
YDL005C |
Subunit of the RNA polymerase II mediator complex |
physical |
11 |
3 |
11 |
Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western |
| MED6 |
YHR058C |
Subunit of the RNA polymerase II mediator complex |
physical |
10 |
3 |
9 |
Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western |
| NUT1 |
YGL151W |
Component of the RNA polymerase II mediator complex |
physical |
10 |
2 |
9 |
Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS |
| PGD1 |
YGL025C |
Subunit of the RNA polymerase II mediator complex |
physical |
9 |
3 |
9 |
Affinity Capture-MS, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western |
| RPO21 |
YDL140C |
RNA polymerase II largest subunit B220 |
physical |
9 |
4 |
8 |
Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Reconstituted Complex, Affinity Capture-MS, Co-purification, Co-purification, Affinity Capture-Western, Affinity Capture-Western |
| SIN4 |
YNL236W |
Subunit of the RNA polymerase II mediator complex |
physical |
9 |
3 |
8 |
Affinity Capture-MS, Affinity Capture-MS, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western |
| MED4 |
YOR174W |
Subunit of the RNA polymerase II mediator complex |
physical |
8 |
3 |
8 |
Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western |
| SRB6 |
YBR253W |
Subunit of the RNA polymerase II mediator complex |
physical |
8 |
3 |
7 |
Affinity Capture-MS, Affinity Capture-MS, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western |
| MED11 |
YMR112C |
Subunit of the RNA polymerase II mediator complex |
physical |
7 |
3 |
7 |
Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Affinity Capture-MS, Affinity Capture-Western |
| CSE2 |
YNR010W |
Subunit of the RNA polymerase II mediator complex |
physical |
7 |
2 |
7 |
Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western |
| ROX3 |
YBL093C |
Subunit of the RNA polymerase II mediator complex |
physical |
6 |
2 |
6 |
Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western |
| SSN3 |
YPL042C |
Component of the RNA polymerase II mediator complex |
physical |
6 |
3 |
4 |
Affinity Capture-Western, Affinity Capture-Western, Co-purification, Co-purification, Affinity Capture-MS, Affinity Capture-Western |
| NUT2 |
YPR168W |
Subunit of the RNA polymerase II mediator complex |
physical |
5 |
2 |
5 |
Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western |
| SSN2 |
YDR443C |
Subunit of the RNA polymerase II mediator complex |
physical |
4 |
2 |
4 |
Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western |
| SRB7 |
YDR308C |
Subunit of the RNA polymerase II mediator complex |
physical |
4 |
2 |
4 |
Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western |
| SOH1 |
YGL127C |
Subunit of the RNA polymerase II mediator complex |
physical |
4 |
2 |
4 |
Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western |
| SRB8 |
YCR081W |
Subunit of the RNA polymerase II mediator complex |
physical |
3 |
2 |
3 |
Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western |
| TFG2 |
YGR005C |
TFIIF (Transcription Factor II) middle subunit |
physical |
3 |
1 |
3 |
Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western |
| PHO85 |
YPL031C |
Cyclin-dependent kinase |
genetic |
3 |
1 |
3 |
Synthetic Lethality, Synthetic Lethality, Synthetic Lethality |
| SSN8 |
YNL025C |
Cyclin-like component of RNA polymerase II holoenzyme |
physical |
3 |
3 |
2 |
Affinity Capture-MS, Affinity Capture-Western, Co-purification |
| RPB3 |
YIL021W |
RNA polymerase II third largest subunit B44 |
physical |
3 |
2 |
2 |
Affinity Capture-Western, Affinity Capture-Western, Co-purification |
| YLR162W |
YLR162W |
Protein of unknown function |
regulation |
2 |
2 |
2 |
chromatin immunoprecipitation-chip evidence, DNA to cDNA expression microarray evidence |
| GAL11 |
YOL051W |
Subunit of the RNA polymerase II mediator complex |
genetic |
2 |
2 |
2 |
Synthetic Growth Defect, Dosage Rescue |
| CDC73 |
YLR418C |
Component of the Paf1p complex |
physical |
2 |
1 |
2 |
Affinity Capture-Western, Affinity Capture-Western |
| PAF1 |
YBR279W |
Component of the Paf1p complex involved in transcription elongation |
physical |
2 |
1 |
2 |
Affinity Capture-Western, Affinity Capture-Western |
| HHF1 |
YBR009C |
Histone H4 |
physical |
2 |
1 |
2 |
Reconstituted Complex, Reconstituted Complex |
| HHF2 |
YNL030W |
Histone H4 |
physical |
2 |
1 |
2 |
Reconstituted Complex, Reconstituted Complex |
| SPT15 |
YER148W |
TATA-binding protein (TBP) |
physical |
2 |
1 |
2 |
Affinity Capture-Western, Affinity Capture-Western |
| SUA7 |
YPR086W |
Transcription factor TFIIB |
physical |
2 |
2 |
1 |
Affinity Capture-Western, Co-purification |
| TAF9 |
YMR236W |
Subunit (17 kDa) of TFIID and SAGA complexes |
genetic |
2 |
1 |
1 |
Synthetic Lethality, Synthetic Lethality |
| RNA14 |
YMR061W |
Component of the cleavage and polyadenylation factor I (CF I) |
physical |
2 |
1 |
1 |
Affinity Capture-Western, Affinity Capture-Western |
| RNA15 |
YGL044C |
Component of the cleavage and polyadenylation factor I (CF I) |
physical |
2 |
1 |
1 |
Affinity Capture-Western, Affinity Capture-Western |
| GCN5 |
YGR252W |
Catalytic subunit of ADA and SAGA histone acetyltransferase complexes |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| TFC7 |
YOR110W |
RNA pol III transcription initiation factor complex (TFIIIC) subunit |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| PGK1 |
YCR012W |
3-phosphoglycerate kinase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| DET1 |
YDR051C |
Acid phosphatase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| ARE1 |
YCR048W |
Acyl-CoA:sterol acyltransferase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| PPM2 |
YOL141W |
AdoMet-dependent tRNA methyltransferase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| PRE10 |
YOR362C |
Alpha 7 subunit of the 20S proteasome |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| ARG1 |
YOL058W |
Arginosuccinate synthetase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SSA1 |
YAL005C |
ATPase involved in protein folding and NLS-directed nuclear transport |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| KAR2 |
YJL034W |
ATPase involved in protein import into the ER |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| PRE2 |
YPR103W |
Beta 5 subunit of the 20S proteasome |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SIP4 |
YJL089W |
C6 zinc cluster transcriptional activator |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| CAT2 |
YML042W |
Carnitine acetyl-CoA transferase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| IMP2 |
YMR035W |
Catalytic subunit of mitochondrial inner membrane peptidase complex |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| TIR3 |
YIL011W |
Cell wall mannoprotein |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SCW4 |
YGR279C |
Cell wall protein with similarity to glucanases |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RTT105 |
YER104W |
Chaperone for Replication Protein A complex (RPA) |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| UMP1 |
YBR173C |
Chaperone required for correct maturation of the 20S proteasome |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| CIT2 |
YCR005C |
Citrate synthase, peroxisomal isozyme involved in glyoxylate cycle |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| IES6 |
YEL044W |
Component of the INO80 chromatin remodeling complex |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RQC2 |
YPL009C |
Component of the Ribosome Quality Control (RQC) complex |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SEC24 |
YIL109C |
Component of the Sec23p-Sec24p heterodimer of the COPII vesicle coat |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| TRS130 |
YMR218C |
Component of transport protein particle (TRAPP) complex II |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| ALG14 |
YBR070C |
Component of UDP-GlcNAc transferase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| OYE2 |
YHR179W |
Conserved NADPH oxidoreductase containing flavin mononucleotide (FMN) |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| ISU1 |
YPL135W |
Conserved protein of the mitochondrial matrix |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SSF1 |
YHR066W |
Constituent of 66S pre-ribosomal particles |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| IST2 |
YBR086C |
Cortical ER protein involved in ER-plasma membrane (PM) tethering |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SIC1 |
YLR079W |
Cyclin-dependent kinase inhibitor (CKI) |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| CPR1 |
YDR155C |
Cytoplasmic peptidyl-prolyl cis-trans isomerase (cyclophilin) |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| AIM2 |
YAL049C |
Cytoplasmic protein involved in mitochondrial function or organization |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| ADE3 |
YGR204W |
Cytoplasmic trifunctional enzyme |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| CTT1 |
YGR088W |
Cytosolic catalase T |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SOD1 |
YJR104C |
Cytosolic copper-zinc superoxide dismutase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| HPA3 |
YEL066W |
D-Amino acid N-acetyltransferase that detoxifies D-amino acids |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| HSP104 |
YLL026W |
Disaggregase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| HNT3 |
YOR258W |
DNA 5' AMP hydrolase involved in DNA repair |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| DDR48 |
YMR173W |
DNA damage-responsive protein |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RDH54 |
YBR073W |
DNA-dependent ATPase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SEC59 |
YMR013C |
Dolichol kinase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| PDA1 |
YER178W |
E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| ENO1 |
YGR254W |
Enolase I, a phosphopyruvate hydratase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SPT23 |
YKL020C |
ER membrane protein involved in regulation of OLE1 transcription |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SEC15 |
YGL233W |
Essential 113 kDa subunit of the exocyst complex |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| ZPR1 |
YGR211W |
Essential protein with two zinc fingers |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SEC62 |
YPL094C |
Essential subunit of Sec63 complex |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RRP40 |
YOL142W |
Exosome non-catalytic core component |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| ERG9 |
YHR190W |
Farnesyl-diphosphate farnesyl transferase (squalene synthase) |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| FBA1 |
YKL060C |
Fructose 1,6-bisphosphate aldolase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| GCG1 |
YER163C |
Gamma-glutamyl cyclotransferase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| TDH3 |
YGR192C |
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 3 |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SPI1 |
YER150W |
GPI-anchored cell wall protein involved in weak acid resistance |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| GYP8 |
YFL027C |
GTPase-activating protein for yeast Rab family members |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SSA4 |
YER103W |
Heat shock protein that is highly induced upon stress |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| BAP2 |
YBR068C |
High-affinity leucine permease |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YOX1 |
YML027W |
Homeobox transcriptional repressor |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| APJ1 |
YNL077W |
Hsp40 chaperone with a role in SUMO-mediated protein degradation |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| FES1 |
YBR101C |
Hsp70 (Ssa1p) nucleotide exchange factor |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| HSP82 |
YPL240C |
Hsp90 chaperone |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| NIC96 |
YFR002W |
Linker nucleoporin component of the nuclear pore complex (NPC) |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| VPS13 |
YLL040C |
Lipid transport protein involved in prospore membrane morphogenesis |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| HXT3 |
YDR345C |
Low affinity glucose transporter of the major facilitator superfamily |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| PET9 |
YBL030C |
Major ADP/ATP carrier of the mitochondrial inner membrane |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| IRC15 |
YPL017C |
Microtubule associated protein |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| VAS1 |
YGR094W |
Mitochondrial and cytoplasmic valyl-tRNA synthetase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SLM5 |
YCR024C |
Mitochondrial asparaginyl-tRNA synthetase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| COI1 |
YDR381C-A |
Mitochondrial assembly factor |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| COX14 |
YML129C |
Mitochondrial cytochrome c oxidase (complex IV) assembly factor |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| AAC1 |
YMR056C |
Mitochondrial inner membrane ADP/ATP translocator |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| QRI5 |
YLR204W |
Mitochondrial inner membrane protein |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| NAM2 |
YLR382C |
Mitochondrial leucyl-tRNA synthetase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| MAE1 |
YKL029C |
Mitochondrial malic enzyme |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| MIM2 |
YLR099W-A |
Mitochondrial protein required for outer membrane protein import |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| TIS11 |
YLR136C |
mRNA-binding protein expressed during iron starvation |
regulation |
1 |
1 |
1 |
DNA to cDNA expression microarray evidence |
| YLL056C |
YLL056C |
NADH-dependent aldehyde reductase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YDL124W |
YDL124W |
NADPH-dependent alpha-keto amide reductase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| AIM14 |
YGL160W |
NADPH oxidase localized to the perinuclear ER |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| HMT1 |
YBR034C |
Nuclear SAM-dependent mono- and asymmetric methyltransferase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| HSP78 |
YDR258C |
Oligomeric mitochondrial matrix chaperone |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| CTF19 |
YPL018W |
Outer kinetochore protein, needed for accurate chromosome segregation |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| TOK1 |
YJL093C |
Outward-rectifier potassium channel of the plasma membrane |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| PLN1 |
YKR046C |
Perilipin, involved in formation and stability of lipid droplets |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| ATG2 |
YNL242W |
Peripheral membrane protein required for autophagic vesicle formation |
regulation |
1 |
1 |
1 |
DNA to cDNA expression microarray evidence |
| STR3 |
YGL184C |
Peroxisomal cystathionine beta-lyase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| STE5 |
YDR103W |
Pheromone-responsive MAPK scaffold protein |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| PTP3 |
YER075C |
Phosphotyrosine-specific protein phosphatase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SUR7 |
YML052W |
Plasma membrane protein, component of eisosomes |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| APT2 |
YDR441C |
Potential adenine phosphoribosyltransferase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RPS16A |
YMR143W |
Protein component of the small (40S) ribosomal subunit |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RPS24B |
YIL069C |
Protein component of the small (40S) ribosomal subunit |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RPS27A |
YKL156W |
Protein component of the small (40S) ribosomal subunit |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SDS23 |
YGL056C |
Protein involved in cell separation during budding |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RGI1 |
YER067W |
Protein involved in energy metabolism under respiratory conditions |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YMR262W |
YMR262W |
Protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| FMP52 |
YER004W |
Protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| GEP7 |
YGL057C |
Protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| AIM26 |
YKL037W |
Protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| ATG41 |
YPL250C |
Protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YBR071W |
YBR071W |
Protein of unknown function found in the cytoplasm and bud neck |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| TMA10 |
YLR327C |
Protein of unknown function that associates with ribosomes |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| COS111 |
YBR203W |
Protein required for antifungal drug ciclopirox olamine resistance |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| PET191 |
YJR034W |
Protein required for assembly of cytochrome c oxidase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SDH8 |
YBR269C |
Protein required for assembly of succinate dehydrogenase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SPG4 |
YMR107W |
Protein required for high temperature survival during stationary phase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RSF1 |
YMR030W |
Protein required for respiratory growth |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| ADY3 |
YDL239C |
Protein required for spore wall formation |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| UIP4 |
YPL186C |
Protein that interacts with Ulp1p |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| GGA2 |
YHR108W |
Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SDD2 |
YMR074C |
Protein with homology to human PDCD5 |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| ERP5 |
YHR110W |
Protein with similarity to Emp24p and Erv25p |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RTS3 |
YGR161C |
Putative component of the protein phosphatase type 2A complex |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YNL097C-B |
YNL097C-B |
Putative protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YOR111W |
YOR111W |
Putative protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YGR201C |
YGR201C |
Putative protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YIR016W |
YIR016W |
Putative protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YGR210C |
YGR210C |
Putative protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YPL119C-A |
YPL119C-A |
Putative protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YLR285C-A |
YLR285C-A |
Putative protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YBR072C-A |
YBR072C-A |
Putative protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YDR246W-A |
YDR246W-A |
Putative protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YGR161W-C |
YGR161W-C |
Putative protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YGL262W |
YGL262W |
Putative protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YKR070W |
YKR070W |
Putative protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| YLR012C |
YLR012C |
Putative protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| OAF3 |
YKR064W |
Putative transcriptional repressor with Zn(2)-Cys(6) finger |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| UBP5 |
YER144C |
Putative ubiquitin-specific protease |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| CDC19 |
YAL038W |
Pyruvate kinase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| MSB3 |
YNL293W |
Rab GTPase-activating protein |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| STE2 |
YFL026W |
Receptor for alpha-factor pheromone |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RPL11A |
YPR102C |
Ribosomal 60S subunit protein L11A |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RPL19A |
YBR084C-A |
Ribosomal 60S subunit protein L19A |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RPL31B |
YLR406C |
Ribosomal 60S subunit protein L31B |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RPL39 |
YJL189W |
Ribosomal 60S subunit protein L39 |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RPS23A |
YGR118W |
Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| TFC7 |
YOR110W |
RNA pol III transcription initiation factor complex (TFIIIC) subunit |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| HSP42 |
YDR171W |
Small heat shock protein (sHSP) with chaperone activity |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| HSP26 |
YBR072W |
Small heat shock protein (sHSP) with chaperone activity |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| PMP3 |
YDR276C |
Small plasma membrane protein |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| TAF14 |
YPL129W |
Subunit of TFIID, TFIIF, INO80, SWI/SNF, and NuA3 complexes |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| APC9 |
YLR102C |
Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SLM4 |
YBR077C |
Subunit of the EGO/GSE complex |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| GET2 |
YER083C |
Subunit of the GET complex |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SNF11 |
YDR073W |
Subunit of the SWI/SNF chromatin remodeling complex |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| GPM1 |
YKL152C |
Tetrameric phosphoglycerate mutase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| ERO1 |
YML130C |
Thiol oxidase required for oxidative protein folding in the ER |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| GCR1 |
YPL075W |
Transcriptional activator of genes involved in glycolysis |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| XBP1 |
YIL101C |
Transcriptional repressor |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| RPN4 |
YDL020C |
Transcription factor that stimulates expression of proteasome genes |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| TEF1 |
YPR080W |
Translational elongation factor EF-1 alpha |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SUP35 |
YDR172W |
Translation termination factor eRF3 |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| TPI1 |
YDR050C |
Triose phosphate isomerase, abundant glycolytic enzyme |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| SIS1 |
YNL007C |
Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| ATG27 |
YJL178C |
Type I membrane protein involved in autophagy and the Cvt pathway |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| UBI4 |
YLL039C |
Ubiquitin |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| ATG8 |
YBL078C |
Ub-like protein |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| VTC4 |
YJL012C |
Vacuolar membrane polyphosphate polymerase |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| BTN2 |
YGR142W |
v-SNARE binding protein |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| BRE4 |
YDL231C |
Zinc finger protein containing five transmembrane domains |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| STP3 |
YLR375W |
Zinc-finger protein of unknown function |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| HAP4 |
YKL109W |
Transcription factor |
regulation |
1 |
1 |
1 |
chromatin immunoprecipitation-chip evidence |
| CDC73 |
YLR418C |
Component of the Paf1p complex |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| PAF1 |
YBR279W |
Component of the Paf1p complex involved in transcription elongation |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
| RPO21 |
YDL140C |
RNA polymerase II largest subunit B220 |
genetic |
1 |
1 |
1 |
Synthetic Rescue |
| RTF1 |
YGL244W |
Subunit of RNAPII-associated chromatin remodeling Paf1 complex |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
| RPB2 |
YOR151C |
RNA polymerase II second largest subunit B150 |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| BRE1 |
YDL074C |
E3 ubiquitin ligase |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
| MTR4 |
YJL050W |
RNA duplex-sensing translocase |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| CDC48 |
YDL126C |
AAA ATPase with protein-unfoldase activity |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| RPB5 |
YBR154C |
RNA polymerase subunit ABC27 |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| RPB4 |
YJL140W |
RNA polymerase II subunit B32 |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| RPB4 |
YJL140W |
RNA polymerase II subunit B32 |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
| HPR1 |
YDR138W |
Subunit of THO/TREX complexes |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| SIN4 |
YNL236W |
Subunit of the RNA polymerase II mediator complex |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
| SRB5 |
YGR104C |
Subunit of the RNA polymerase II mediator complex |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| SRP1 |
YNL189W |
Karyopherin alpha homolog |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| TAF14 |
YPL129W |
Subunit of TFIID, TFIIF, INO80, SWI/SNF, and NuA3 complexes |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| TUP1 |
YCR084C |
General repressor of transcription in complex with Cyc8p |
physical |
1 |
1 |
1 |
Affinity Capture-Western |
| SWI5 |
YDR146C |
Transcription factor that recruits Mediator and Swi/Snf complexes |
physical |
1 |
1 |
1 |
Co-localization |
| SSA3 |
YBL075C |
ATPase involved in protein folding and the response to stress |
physical |
1 |
1 |
1 |
Affinity Capture-Western |
| TFB4 |
YPR056W |
Subunit of TFIIH complex |
physical |
1 |
1 |
1 |
Co-purification |
| SSB2 |
YNL209W |
Cytoplasmic ATPase that is a ribosome-associated molecular chaperone |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| TEF1 |
YPR080W |
Translational elongation factor EF-1 alpha |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| SWI6 |
YLR182W |
Transcription cofactor |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| TEL2 |
YGR099W |
Subunit of the ASTRA complex, involved in chromatin remodeling |
genetic |
1 |
1 |
1 |
Dosage Rescue |
| TAF1 |
YGR274C |
TFIID subunit, involved in RNA pol II transcription initiation |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
| DST1 |
YGL043W |
General transcription elongation factor TFIIS |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
| CCR4 |
YAL021C |
Component of the CCR4-NOT transcriptional complex |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| CCR4 |
YAL021C |
Component of the CCR4-NOT transcriptional complex |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
| HAT2 |
YEL056W |
Subunit of the Hat1p-Hat2p histone acetyltransferase complex |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| DHH1 |
YDL160C |
Cytoplasmic DEAD-box helicase and mRNA decapping activator |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| ADA2 |
YDR448W |
Transcription coactivator |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| MOT1 |
YPL082C |
Essential protein involved in regulation of transcription |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| ARP8 |
YOR141C |
Nuclear actin-related protein involved in chromatin remodeling |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| NHP6B |
YBR089C-A |
High-mobility group (HMG) protein |
physical |
1 |
1 |
1 |
PCA |
| RPB11 |
YOL005C |
RNA polymerase II subunit B12.5 |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| RPB9 |
YGL070C |
RNA polymerase II subunit B12.6 |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| RPB8 |
YOR224C |
RNA polymerase subunit ABC14.5 |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| RPO26 |
YPR187W |
RNA polymerase subunit ABC23 |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| HFI1 |
YPL254W |
Adaptor protein required for structural integrity of the SAGA complex |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
| NGG1 |
YDR176W |
Subunit of chromatin modifying histone acetyltransferase complexes |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| SPT20 |
YOL148C |
Subunit of the SAGA transcriptional regulatory complex |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
| EGD2 |
YHR193C |
Alpha subunit of the nascent polypeptide-associated complex (NAC) |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| ATP3 |
YBR039W |
Gamma subunit of the F1 sector of mitochondrial F1F0 ATP synthase |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| HTB1 |
YDR224C |
Histone H2B |
physical |
1 |
1 |
1 |
Reconstituted Complex |
| GET1 |
YGL020C |
Subunit of the GET complex |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| GET2 |
YER083C |
Subunit of the GET complex |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
| HSP104 |
YLL026W |
Disaggregase |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| RNQ1 |
YCL028W |
[PIN(+)] prion |
physical |
1 |
1 |
1 |
Affinity Capture-Western |
| RAD6 |
YGL058W |
Ubiquitin-conjugating enzyme (E2) |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| RPP0 |
YLR340W |
Conserved ribosomal protein P0 of the ribosomal stalk |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| CIN8 |
YEL061C |
Bipolar kinesin motor protein |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
| HHT1 |
YBR010W |
Histone H3 |
physical |
1 |
1 |
1 |
Reconstituted Complex |
| DEF1 |
YKL054C |
RNAPII degradation factor |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| MMS22 |
YLR320W |
Subunit of E3 ubiquitin ligase complex involved in replication repair |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| GDH2 |
YDL215C |
NAD(+)-dependent glutamate dehydrogenase |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| NHP6A |
YPR052C |
High-mobility group (HMG) protein |
physical |
1 |
1 |
1 |
PCA |
| RPC10 |
YHR143W-A |
RNA polymerase subunit ABC10-alpha, found in RNA pol I, II, and III |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| BUR6 |
YER159C |
Subunit of a heterodimeric NC2 transcription regulator complex |
genetic |
1 |
1 |
1 |
Synthetic Rescue |
| GAL4 |
YPL248C |
DNA-binding transcription factor required for activating GAL genes |
physical |
1 |
1 |
1 |
Affinity Capture-Western |
| MPT5 |
YGL178W |
mRNA-binding protein of the PUF family |
physical |
1 |
1 |
1 |
Affinity Capture-RNA |
| HHT2 |
YNL031C |
Histone H3 |
physical |
1 |
1 |
1 |
Reconstituted Complex |
| RPS10B |
YMR230W |
Protein component of the small (40S) ribosomal subunit |
physical |
1 |
1 |
1 |
Affinity Capture-MS |
| RTR1 |
YER139C |
Dual specificity protein phosphatase |
genetic |
1 |
1 |
1 |
Synthetic Growth Defect |
| LGE1 |
YPL055C |
Protein involved in histone H2B ubiquitination |
genetic |
1 |
1 |
1 |
Synthetic Lethality |
