Standard name Systematic name Name description Description
MSN4 YKL062W Stress-responsive transcriptional activator Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes, inducing gene expression; involved in diauxic shift
Visualize the interactome of MSN4
Links to external databases:
  SGD   |   KEGG   |  

Cell cycle phase and timing of transcription peak

Cell cycle phase Time (min)
G2 125

CYCLoPs localization & abundance

WT1 WT2 WT3
no data no data no data

GFP localization & abundance

GFP localization GFP abundance
no data no data

GO term count

Metabolism Cell cycle Cell division Signal transduction DNA replication
MSN4 19 0 0 0 0

List of interactors

Use the search utility to find the interactor you are looking for. By clicking the column headers the table will be sorted on that column. Use shift+click to sort on multiple columns. Default sorting is on number of experiments, number of unique methods and the number of publications, and alphabetical on standard name, in that order.
Standard name Systematic name Name description Type #Experiments #Methods #Publications Evidence
MSN2 YMR037C Stress-responsive transcriptional activator genetic 34 6 32 Dosage Rescue, Phenotypic Enhancement, Phenotypic Enhancement, Phenotypic Enhancement, Phenotypic Enhancement, Phenotypic Enhancement, Phenotypic Enhancement, Phenotypic Enhancement, Phenotypic Enhancement, Phenotypic Enhancement, Phenotypic Enhancement, Synthetic Growth Defect, Phenotypic Enhancement, Synthetic Rescue, Synthetic Lethality, Synthetic Growth Defect, Phenotypic Enhancement, Phenotypic Enhancement, Negative Genetic, Synthetic Rescue, Phenotypic Enhancement, Synthetic Growth Defect, Phenotypic Enhancement, Phenotypic Enhancement, Phenotypic Enhancement, Synthetic Growth Defect, Phenotypic Enhancement, Synthetic Growth Defect, Phenotypic Enhancement, Synthetic Growth Defect, Phenotypic Enhancement, Phenotypic Enhancement, Phenotypic Enhancement, Phenotypic Enhancement
GIS1 YDR096W Histone demethylase and transcription factor genetic 8 4 6 Synthetic Growth Defect, Phenotypic Suppression, Phenotypic Enhancement, Negative Genetic, Phenotypic Enhancement, Phenotypic Enhancement, Synthetic Growth Defect, Phenotypic Enhancement
CTT1 YGR088W Cytosolic catalase T regulation 5 3 5 chromatin immunoprecipitation-chip evidence, northern blot evidence, northern blot evidence, quantitative reverse transcription polymerase chain reaction evidence, quantitative reverse transcription polymerase chain reaction evidence
RAS2 YNL098C GTP-binding protein genetic 4 4 4 Phenotypic Suppression, Synthetic Rescue, Dosage Growth Defect, Negative Genetic
HSP12 YFL014W Plasma membrane protein involved in maintaining membrane organization regulation 3 2 3 quantitative reverse transcription polymerase chain reaction evidence, quantitative reverse transcription polymerase chain reaction evidence, RNA-sequencing evidence
SCH9 YHR205W AGC family protein kinase genetic 3 2 3 Phenotypic Suppression, Phenotypic Suppression, Negative Genetic
HSP82 YPL240C Hsp90 chaperone physical 3 1 3 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
ARL1 YBR164C Soluble GTPase with a role in regulation of membrane traffic genetic 3 1 2 Negative Genetic, Negative Genetic, Negative Genetic
HDA3 YPR179C Subunit of HDA1 histone deacetylase complex genetic 3 1 2 Negative Genetic, Negative Genetic, Negative Genetic
INO2 YDR123C Transcription factor genetic 3 1 2 Negative Genetic, Negative Genetic, Negative Genetic
RTG3 YBL103C bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways genetic 3 1 2 Negative Genetic, Negative Genetic, Negative Genetic
VAM6 YDL077C Guanine nucleotide exchange factor for the GTPase Gtr1p genetic 3 1 2 Negative Genetic, Negative Genetic, Negative Genetic
RPA14 YDR156W RNA polymerase I subunit A14 genetic 3 1 2 Negative Genetic, Negative Genetic, Negative Genetic
RPA12 YJR063W RNA polymerase I subunit A12.2 physical 3 3 1 PCA, Affinity Capture-Western, Reconstituted Complex
FKH2 YNL068C Forkhead family transcription factor regulation 2 2 2 chromatin immunoprecipitation-chip evidence, ChEC-Seq experiments
MSN2 YMR037C Stress-responsive transcriptional activator regulation 2 2 2 chromatin immunoprecipitation-chip evidence, RNA-sequencing evidence
SSA1 YAL005C ATPase involved in protein folding and NLS-directed nuclear transport regulation 2 2 2 chromatin immunoprecipitation-chip evidence, RNA-sequencing evidence
YGP1 YNL160W Cell wall-related secretory glycoprotein regulation 2 2 2 chromatin immunoprecipitation-chip evidence, RNA-sequencing evidence
ALD3 YMR169C Cytoplasmic aldehyde dehydrogenase regulation 2 2 2 northern blot evidence, quantitative reverse transcription polymerase chain reaction evidence
TDH3 YGR192C Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 3 regulation 2 2 2 chromatin immunoprecipitation-chip evidence, RNA-sequencing evidence
TSL1 YML100W Large subunit of trehalose 6-phosphate synthase/phosphatase complex regulation 2 2 2 chromatin immunoprecipitation-chip evidence, RNA-sequencing evidence
HSP78 YDR258C Oligomeric mitochondrial matrix chaperone regulation 2 2 2 chromatin immunoprecipitation-chip evidence, RNA-sequencing evidence
CUE4 YML101C Protein of unknown function regulation 2 2 2 chromatin immunoprecipitation-chip evidence, RNA-sequencing evidence
RTC3 YHR087W Protein of unknown function involved in RNA metabolism regulation 2 2 2 chromatin immunoprecipitation-chip evidence, quantitative reverse transcription polymerase chain reaction evidence
HSP26 YBR072W Small heat shock protein (sHSP) with chaperone activity regulation 2 2 2 chromatin immunoprecipitation-chip evidence, RNA-sequencing evidence
ESA1 YOR244W Catalytic subunit of the histone acetyltransferase complex (NuA4) physical 2 2 2 Reconstituted Complex, Affinity Capture-MS
TPK1 YJL164C cAMP-dependent protein kinase catalytic subunit genetic 2 2 2 Synthetic Growth Defect, Phenotypic Enhancement
TPK2 YPL203W cAMP-dependent protein kinase catalytic subunit genetic 2 2 2 Synthetic Rescue, Synthetic Growth Defect
RIM15 YFL033C Protein kinase involved in cell proliferation in response to nutrients genetic 2 2 2 Phenotypic Enhancement, Phenotypic Suppression
SOD1 YJR104C Cytosolic copper-zinc superoxide dismutase genetic 2 2 2 Negative Genetic, Phenotypic Enhancement
TPK3 YKL166C cAMP-dependent protein kinase catalytic subunit genetic 2 2 2 Synthetic Growth Defect, Phenotypic Enhancement
SNF1 YDR477W AMP-activated S/T protein kinase genetic 2 2 2 Synthetic Growth Defect, Phenotypic Enhancement
WHI2 YOR043W Negative regulator of TORC1 in response to limiting leucine genetic 2 2 2 Phenotypic Enhancement, Dosage Rescue
GCN5 YGR252W Catalytic subunit of ADA and SAGA histone acetyltransferase complexes physical 2 1 2 Affinity Capture-MS, Affinity Capture-MS
IXR1 YKL032C Transcriptional repressor that regulates hypoxic genes during normoxia genetic 2 1 2 Negative Genetic, Negative Genetic
SSA1 YAL005C ATPase involved in protein folding and NLS-directed nuclear transport physical 2 1 2 Affinity Capture-MS, Affinity Capture-MS
SPT23 YKL020C ER membrane protein involved in regulation of OLE1 transcription genetic 2 1 2 Negative Genetic, Negative Genetic
GRE1 YPL223C Hydrophilin essential in desiccation-rehydration process regulation 2 2 1 chromatin immunoprecipitation-qPCR evidence, northern blot evidence
SPS100 YHR139C Protein required for spore wall maturation regulation 2 2 1 chromatin immunoprecipitation-qPCR evidence, northern blot evidence
RTN2 YDL204W Reticulon protein regulation 2 2 1 chromatin immunoprecipitation-qPCR evidence, northern blot evidence
PNC1 YGL037C Nicotinamidase that converts nicotinamide to nicotinic acid genetic 2 2 1 Dosage Rescue, Phenotypic Suppression
PET122 YER153C Mitochondrial translational activator specific for the COX3 mRNA genetic 2 1 1 Negative Genetic, Negative Genetic
OCA2 YNL056W Protein of unknown function genetic 2 1 1 Negative Genetic, Negative Genetic
FKH1 YIL131C Forkhead family transcription factor regulation 1 1 1 chromatin immunoprecipitation-chip evidence
SFP1 YLR403W Regulates transcription of ribosomal protein and biogenesis genes regulation 1 1 1 DNA to cDNA expression microarray evidence
MET32 YDR253C Zinc-finger DNA-binding transcription factor regulation 1 1 1 chromatin immunoprecipitation-chip evidence
MET4 YNL103W Leucine-zipper transcriptional activator regulation 1 1 1 chromatin immunoprecipitation-chip evidence
RAP1 YNL216W Essential DNA-binding transcription regulator that binds many loci regulation 1 1 1 DNA to cDNA expression microarray evidence
CDC28 YBR160W Cyclin-dependent kinase (CDK) catalytic subunit regulation 1 1 1 quantitative mass spectrometry evidence
APD1 YBR151W 2Fe-2S cytosolic protein of unknown function regulation 1 1 1 RNA-sequencing evidence
PGK1 YCR012W 3-phosphoglycerate kinase regulation 1 1 1 RNA-sequencing evidence
GND1 YHR183W 6-phosphogluconate dehydrogenase (decarboxylating) regulation 1 1 1 RNA-sequencing evidence
ADY2 YCR010C Acetate transporter required for normal sporulation regulation 1 1 1 RNA-sequencing evidence
ARF1 YDL192W ADP-ribosylation factor regulation 1 1 1 chromatin immunoprecipitation-chip evidence
ADH1 YOL086C Alcohol dehydrogenase regulation 1 1 1 RNA-sequencing evidence
GRE3 YHR104W Aldose reductase regulation 1 1 1 chromatin immunoprecipitation-chip evidence
ROD1 YOR018W Alpha-arrestin involved in ubiquitin-dependent endocytosis regulation 1 1 1 chromatin immunoprecipitation-chip evidence
PDR10 YOR328W ATP-binding cassette (ABC) transporter regulation 1 1 1 RNA-sequencing evidence
MET3 YJR010W ATP sulfurylase regulation 1 1 1 RNA-sequencing evidence
GAS1 YMR307W Beta-1,3-glucanosyltransferase required for cell wall assembly regulation 1 1 1 RNA-sequencing evidence
PRE2 YPR103W Beta 5 subunit of the 20S proteasome regulation 1 1 1 chromatin immunoprecipitation-chip evidence
BOR1 YNL275W Boron efflux transporter of the plasma membrane regulation 1 1 1 RNA-sequencing evidence
GNP1 YDR508C Broad specificity amino acid permease regulation 1 1 1 RNA-sequencing evidence
AGP1 YCL025C Broad-specificity, low-affinity amino acid permease regulation 1 1 1 RNA-sequencing evidence
ERG4 YGL012W C-24(28) sterol reductase regulation 1 1 1 RNA-sequencing evidence
NCE103 YNL036W Carbonic anhydrase regulation 1 1 1 RNA-sequencing evidence
CCW12 YLR110C Cell wall mannoprotein regulation 1 1 1 RNA-sequencing evidence
CCW22 YDR134C Cell wall protein regulation 1 1 1 RNA-sequencing evidence
SUN4 YNL066W Cell wall protein related to glucanases localized in birth scars regulation 1 1 1 RNA-sequencing evidence
SCW10 YMR305C Cell wall protein with similarity to glucanases regulation 1 1 1 RNA-sequencing evidence
RAD17 YOR368W Checkpoint protein regulation 1 1 1 RNA-sequencing evidence
YHM2 YMR241W Citrate and oxoglutarate carrier protein regulation 1 1 1 RNA-sequencing evidence
UPF3 YGR072W Component of the nonsense-mediated mRNA decay (NMD) pathway regulation 1 1 1 chromatin immunoprecipitation-chip evidence
OYE3 YPL171C Conserved NADPH oxidoreductase containing flavin mononucleotide (FMN) regulation 1 1 1 RNA-sequencing evidence
CWP2 YKL096W-A Covalently linked cell wall mannoprotein regulation 1 1 1 RNA-sequencing evidence
CIP1 YPL014W Cyclin-dependent kinase inhibitor regulation 1 1 1 northern blot evidence
PCL1 YNL289W Cyclin, interacts with cyclin-dependent kinase Pho85p regulation 1 1 1 RNA-sequencing evidence
CYB2 YML054C Cytochrome b2 (L-lactate cytochrome-c oxidoreductase) regulation 1 1 1 RNA-sequencing evidence
RCF2 YNR018W Cytochrome c oxidase subunit regulation 1 1 1 RNA-sequencing evidence
PAI3 YMR174C Cytoplasmic proteinase A (Pep4p) inhibitor regulation 1 1 1 RNA-sequencing evidence
SOD1 YJR104C Cytosolic copper-zinc superoxide dismutase regulation 1 1 1 RNA-sequencing evidence
DAK1 YML070W Dihydroxyacetone kinase regulation 1 1 1 quantitative reverse transcription polymerase chain reaction evidence
POG1 YIL122W DNA-binding transcriptional activator regulation 1 1 1 RNA-sequencing evidence
DDR48 YMR173W DNA damage-responsive protein regulation 1 1 1 chromatin immunoprecipitation-chip evidence
YLR279W YLR279W Dubious open reading frame regulation 1 1 1 RNA-sequencing evidence
YLR280C YLR280C Dubious open reading frame regulation 1 1 1 RNA-sequencing evidence
YML101C-A YML101C-A Dubious open reading frame regulation 1 1 1 RNA-sequencing evidence
YMR135W-A YMR135W-A Dubious open reading frame regulation 1 1 1 RNA-sequencing evidence
YMR307C-A YMR307C-A Dubious open reading frame regulation 1 1 1 RNA-sequencing evidence
YAL004W YAL004W Dubious open reading frame regulation 1 1 1 RNA-sequencing evidence
YLR154W-F YLR154W-F Dubious open reading frame regulation 1 1 1 RNA-sequencing evidence
YLR154W-E YLR154W-E Dubious open reading frame regulation 1 1 1 RNA-sequencing evidence
YAL037C-B YAL037C-B Dubious open reading frame regulation 1 1 1 RNA-sequencing evidence
YBL113W-A YBL113W-A Dubious open reading frame regulation 1 1 1 RNA-sequencing evidence
YNL179C YNL179C Dubious open reading frame regulation 1 1 1 RNA-sequencing evidence
YMR173W-A YMR173W-A Dubious open reading frame regulation 1 1 1 RNA-sequencing evidence
YDR133C YDR133C Dubious open reading frame regulation 1 1 1 RNA-sequencing evidence
YCR013C YCR013C Dubious open reading frame regulation 1 1 1 RNA-sequencing evidence
WSC4 YHL028W Endoplasmic reticulum (ER) membrane protein regulation 1 1 1 RNA-sequencing evidence
YHR140W YHR140W Endoplasmic reticulum protein regulation 1 1 1 northern blot evidence
ENO1 YGR254W Enolase I, a phosphopyruvate hydratase regulation 1 1 1 RNA-sequencing evidence
ENO2 YHR174W Enolase II, a phosphopyruvate hydratase regulation 1 1 1 RNA-sequencing evidence
YPR063C YPR063C ER-localized protein of unknown function regulation 1 1 1 chromatin immunoprecipitation-chip evidence
HOF1 YMR032W F-BAR protein that regulates actin cytoskeleton organization regulation 1 1 1 RNA-sequencing evidence
CLN1 YMR199W G1 cyclin involved in regulation of the cell cycle regulation 1 1 1 RNA-sequencing evidence
GLK1 YCL040W Glucokinase regulation 1 1 1 RNA-sequencing evidence
ZWF1 YNL241C Glucose-6-phosphate dehydrogenase (G6PD) regulation 1 1 1 chromatin immunoprecipitation-chip evidence
GLN1 YPR035W Glutamine synthetase (GS) regulation 1 1 1 RNA-sequencing evidence
TDH1 YJL052W Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 1 regulation 1 1 1 RNA-sequencing evidence
TDH2 YJR009C Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 2 regulation 1 1 1 RNA-sequencing evidence
GPT2 YKR067W Glycerol-3-phosphate/dihydroxyacetone phosphate sn-1 acyltransferase regulation 1 1 1 chromatin immunoprecipitation-chip evidence
GDB1 YPR184W Glycogen debranching enzyme regulation 1 1 1 RNA-sequencing evidence
TOS6 YNL300W Glycosylphosphatidylinositol-dependent cell wall protein regulation 1 1 1 RNA-sequencing evidence
ECM33 YBR078W GPI-anchored protein involved in efficient glucose uptake regulation 1 1 1 RNA-sequencing evidence
HPF1 YOL155C Haze-protective mannoprotein regulation 1 1 1 RNA-sequencing evidence
SSA4 YER103W Heat shock protein that is highly induced upon stress regulation 1 1 1 chromatin immunoprecipitation-chip evidence
ROX1 YPR065W Heme-dependent repressor of hypoxic genes regulation 1 1 1 chromatin immunoprecipitation-chip evidence
HXK1 YFR053C Hexokinase isoenzyme 1 regulation 1 1 1 RNA-sequencing evidence
YCT1 YLL055W High-affinity cysteine-specific transporter regulation 1 1 1 RNA-sequencing evidence
FTR1 YER145C High affinity iron permease regulation 1 1 1 RNA-sequencing evidence
MUP1 YGR055W High affinity methionine permease regulation 1 1 1 RNA-sequencing evidence
SUL1 YBR294W High affinity sulfate permease of the SulP anion transporter family regulation 1 1 1 RNA-sequencing evidence
TAT2 YOL020W High affinity tryptophan and tyrosine permease regulation 1 1 1 RNA-sequencing evidence
YOX1 YML027W Homeobox transcriptional repressor regulation 1 1 1 RNA-sequencing evidence
TOS8 YGL096W Homeodomain-containing protein and putative transcription factor regulation 1 1 1 RNA-sequencing evidence
CUP9 YPL177C Homeodomain-containing transcriptional repressor regulation 1 1 1 RNA-sequencing evidence
HSP82 YPL240C Hsp90 chaperone regulation 1 1 1 RNA-sequencing evidence
INO1 YJL153C Inositol-3-phosphate synthase regulation 1 1 1 RNA-sequencing evidence
PTR2 YKR093W Integral membrane peptide transporter regulation 1 1 1 RNA-sequencing evidence
TVP23 YDR084C Integral membrane protein regulation 1 1 1 chromatin immunoprecipitation-chip evidence
YNL194C YNL194C Integral membrane protein regulation 1 1 1 RNA-sequencing evidence
MRS4 YKR052C Iron transporter of the mitochondrial carrier family regulation 1 1 1 chromatin immunoprecipitation-chip evidence
LEU1 YGL009C Isopropylmalate isomerase regulation 1 1 1 RNA-sequencing evidence
RPH1 YER169W JmjC domain-containing histone demethylase regulation 1 1 1 RNA-sequencing evidence
PRY1 YJL079C Lipid binding protein regulation 1 1 1 RNA-sequencing evidence
LSM3 YLR438C-A Lsm (Like Sm) protein regulation 1 1 1 chromatin immunoprecipitation-chip evidence
PHM8 YER037W Lysophosphatidic acid (LPA) phosphatase, nucleotidase regulation 1 1 1 chromatin immunoprecipitation-qPCR evidence
PDC1 YLR044C Major of three pyruvate decarboxylase isozymes regulation 1 1 1 RNA-sequencing evidence
MAL32 YBR299W Maltase (alpha-D-glucosidase) regulation 1 1 1 RNA-sequencing evidence
MAL31 YBR298C Maltose permease regulation 1 1 1 RNA-sequencing evidence
SRL1 YOR247W Mannoprotein that exhibits a tight association with the cell wall regulation 1 1 1 RNA-sequencing evidence
CIS3 YJL158C Mannose-containing glycoprotein constituent of the cell wall regulation 1 1 1 RNA-sequencing evidence
KTR2 YKR061W Mannosyltransferase involved in N-linked protein glycosylation regulation 1 1 1 RNA-sequencing evidence
PDC6 YGR087C Minor isoform of pyruvate decarboxylase regulation 1 1 1 chromatin immunoprecipitation-chip evidence
CCP1 YKR066C Mitochondrial cytochrome-c peroxidase regulation 1 1 1 chromatin immunoprecipitation-chip evidence
UTH1 YKR042W Mitochondrial inner membrane protein regulation 1 1 1 RNA-sequencing evidence
MDH1 YKL085W Mitochondrial malate dehydrogenase regulation 1 1 1 chromatin immunoprecipitation-chip evidence
SOD2 YHR008C Mitochondrial manganese superoxide dismutase regulation 1 1 1 RNA-sequencing evidence
RSO55 YLR281C Mitochondrial protein of unknown function regulation 1 1 1 RNA-sequencing evidence
MCP1 YOR228C Mitochondrial protein of unknown function involved in lipid homeostas regulation 1 1 1 chromatin immunoprecipitation-chip evidence
ISU2 YOR226C Mitochondrial protein required for iron-sulfur protein synthesis regulation 1 1 1 chromatin immunoprecipitation-chip evidence
MMF1 YIL051C Mitochondrial protein required for transamination of isoleucine regulation 1 1 1 chromatin immunoprecipitation-chip evidence
MRPL4 YLR439W Mitochondrial ribosomal protein of the large subunit regulation 1 1 1 chromatin immunoprecipitation-chip evidence
MSB2 YGR014W Mucin family member involved in various signaling pathways regulation 1 1 1 RNA-sequencing evidence
DDR2 YOL052C-A Multi-stress response protein regulation 1 1 1 RNA-sequencing evidence
FDH1 YOR388C NAD(+)-dependent formate dehydrogenase regulation 1 1 1 RNA-sequencing evidence
NNR1 YNL200C NADHX epimerase regulation 1 1 1 DNA to cDNA expression microarray evidence
MTH1 YDR277C Negative regulator of the glucose-sensing signal transduction pathway regulation 1 1 1 RNA-sequencing evidence
HSP30 YCR021C Negative regulator of the H(+)-ATPase Pma1p regulation 1 1 1 chromatin immunoprecipitation-chip evidence
PNC1 YGL037C Nicotinamidase that converts nicotinamide to nicotinic acid regulation 1 1 1 RNA-sequencing evidence
RHO5 YNL180C Non-essential small GTPase of the Rho/Rac family of Ras-like proteins regulation 1 1 1 RNA-sequencing evidence
SOK2 YMR016C Nuclear protein that negatively regulates pseudohyphal differentiation regulation 1 1 1 RNA-sequencing evidence
CSR2 YPR030W Nuclear ubiquitin protein ligase binding protein regulation 1 1 1 RNA-sequencing evidence
HSP150 YJL159W O-mannosylated heat shock protein regulation 1 1 1 RNA-sequencing evidence
YAT1 YAR035W Outer mitochondrial carnitine acetyltransferase regulation 1 1 1 RNA-sequencing evidence
PEX32 YBR168W Peroxisomal integral membrane protein regulation 1 1 1 chromatin immunoprecipitation-chip evidence
ARO10 YDR380W Phenylpyruvate decarboxylase regulation 1 1 1 RNA-sequencing evidence
PCL7 YIL050W Pho85p cyclin of the Pho80p subfamily regulation 1 1 1 chromatin immunoprecipitation-chip evidence
TPS2 YDR074W Phosphatase subunit of the trehalose-6-P synthase/phosphatase complex regulation 1 1 1 RNA-sequencing evidence
PCK1 YKR097W Phosphoenolpyruvate carboxykinase regulation 1 1 1 RNA-sequencing evidence
PGM1 YKL127W Phosphoglucomutase, minor isoform regulation 1 1 1 RNA-sequencing evidence
SIP18 YMR175W Phospholipid-binding hydrophilin regulation 1 1 1 chromatin immunoprecipitation-qPCR evidence
PDR15 YDR406W Plasma membrane ATP binding cassette (ABC) transporter regulation 1 1 1 chromatin immunoprecipitation-qPCR evidence
PDR12 YPL058C Plasma membrane ATP-binding cassette (ABC) transporter regulation 1 1 1 RNA-sequencing evidence
TPO2 YGR138C Polyamine transporter of the major facilitator superfamily regulation 1 1 1 RNA-sequencing evidence
SIM1 YIL123W Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p) regulation 1 1 1 RNA-sequencing evidence
PHM7 YOL084W Protein of unknown function regulation 1 1 1 RNA-sequencing evidence
YBL029C-A YBL029C-A Protein of unknown function regulation 1 1 1 RNA-sequencing evidence
YBR085C-A YBR085C-A Protein of unknown function regulation 1 1 1 RNA-sequencing evidence
CSI2 YOL007C Protein of unknown function regulation 1 1 1 RNA-sequencing evidence
PNS1 YOR161C Protein of unknown function regulation 1 1 1 northern blot evidence
RGI2 YIL057C Protein of unknown function regulation 1 1 1 RNA-sequencing evidence
YKR041W YKR041W Protein of unknown function regulation 1 1 1 RNA-sequencing evidence
YLR162W YLR162W Protein of unknown function regulation 1 1 1 RNA-sequencing evidence
HOR7 YMR251W-A Protein of unknown function regulation 1 1 1 chromatin immunoprecipitation-chip evidence
HER1 YOR227W Protein of unknown function regulation 1 1 1 chromatin immunoprecipitation-chip evidence
TMA10 YLR327C Protein of unknown function that associates with ribosomes regulation 1 1 1 RNA-sequencing evidence
ENV11 YGR071C Protein proposed to be involved in vacuolar functions regulation 1 1 1 chromatin immunoprecipitation-chip evidence
AFR1 YDR085C Protein required for pheromone-induced projection (shmoo) formation regulation 1 1 1 chromatin immunoprecipitation-chip evidence
LST8 YNL006W Protein required for the transport of Gap1p regulation 1 1 1 chromatin immunoprecipitation-chip evidence
MGA1 YGR249W Protein similar to heat shock transcription factor regulation 1 1 1 RNA-sequencing evidence
OPT1 YJL212C Proton-coupled oligopeptide transporter of the plasma membrane regulation 1 1 1 RNA-sequencing evidence
YHR213W-B YHR213W-B Pseudogenic fragment with similarity to flocculins regulation 1 1 1 RNA-sequencing evidence
YER188C-A YER188C-A Putative protein of unknown function regulation 1 1 1 RNA-sequencing evidence
YOR343C YOR343C Putative protein of unknown function regulation 1 1 1 RNA-sequencing evidence
YCL042W YCL042W Putative protein of unknown function regulation 1 1 1 RNA-sequencing evidence
YHR033W YHR033W Putative protein of unknown function regulation 1 1 1 chromatin immunoprecipitation-chip evidence
YNL193W YNL193W Putative protein of unknown function regulation 1 1 1 RNA-sequencing evidence
YHR086W-A YHR086W-A Putative protein of unknown function regulation 1 1 1 chromatin immunoprecipitation-chip evidence
RRT15 YLR162W-A Putative protein of unknown function regulation 1 1 1 RNA-sequencing evidence
YML100W-A YML100W-A Putative protein of unknown function regulation 1 1 1 chromatin immunoprecipitation-chip evidence
YBR298C-A YBR298C-A Putative protein of unknown function regulation 1 1 1 RNA-sequencing evidence
YNL144C YNL144C Putative protein of unknown function regulation 1 1 1 RNA-sequencing evidence
YMR206W YMR206W Putative protein of unknown function regulation 1 1 1 RNA-sequencing evidence
YDR524C-B YDR524C-B Putative protein of unknown function regulation 1 1 1 RNA-sequencing evidence
FMP48 YGR052W Putative protein of unknown function regulation 1 1 1 chromatin immunoprecipitation-chip evidence
YHR022C YHR022C Putative protein of unknown function regulation 1 1 1 chromatin immunoprecipitation-qPCR evidence
YJR115W YJR115W Putative protein of unknown function regulation 1 1 1 RNA-sequencing evidence
GIP2 YER054C Putative regulatory subunit of protein phosphatase Glc7p regulation 1 1 1 RNA-sequencing evidence
PYK2 YOR347C Pyruvate kinase regulation 1 1 1 RNA-sequencing evidence
CDC19 YAL038W Pyruvate kinase regulation 1 1 1 RNA-sequencing evidence
YLR157C-B YLR157C-B Retrotransposon TYA Gag and TYB Pol genes regulation 1 1 1 RNA-sequencing evidence
GIC2 YDR309C Rho-family GTPase interacting protein and Cdc42p effector regulation 1 1 1 RNA-sequencing evidence
RPL11A YPR102C Ribosomal 60S subunit protein L11A regulation 1 1 1 chromatin immunoprecipitation-chip evidence
PEX2 YJL210W RING-finger peroxin and E3 ubiquitin ligase regulation 1 1 1 RNA-sequencing evidence
PKH1 YDR490C Serine/threonine protein kinase regulation 1 1 1 RNA-sequencing evidence
HBT1 YDL223C Shmoo tip protein, substrate of Hub1p ubiquitin-like protein regulation 1 1 1 RNA-sequencing evidence
HSP42 YDR171W Small heat shock protein (sHSP) with chaperone activity regulation 1 1 1 RNA-sequencing evidence
AQY1 YPR192W Spore-specific water channel regulation 1 1 1 chromatin immunoprecipitation-qPCR evidence
TSA2 YDR453C Stress inducible cytoplasmic thioredoxin peroxidase regulation 1 1 1 chromatin immunoprecipitation-chip evidence
MSN4 YKL062W Stress-responsive transcriptional activator regulation 1 1 1 RNA-sequencing evidence
GID8 YMR135C Subunit of GID Complex, binds strongly to central component Vid30p regulation 1 1 1 RNA-sequencing evidence
IDH1 YNL037C Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase regulation 1 1 1 RNA-sequencing evidence
POP7 YBR167C Subunit of RNase MRP, nuclear RNase P and telomerase regulation 1 1 1 chromatin immunoprecipitation-chip evidence
ASI1 YMR119W Subunit of the inner nuclear membrane Asi ubiquitin ligase complex regulation 1 1 1 chromatin immunoprecipitation-chip evidence
UTP11 YKL099C Subunit of U3-containing Small Subunit (SSU) processome complex regulation 1 1 1 DNA to cDNA expression microarray evidence
SOA1 YIL166C Sulfonate and inorganic sulfur transporter regulation 1 1 1 RNA-sequencing evidence
TPS1 YBR126C Synthase subunit of trehalose-6-P synthase/phosphatase complex regulation 1 1 1 northern blot evidence
GPM1 YKL152C Tetrameric phosphoglycerate mutase regulation 1 1 1 RNA-sequencing evidence
HAA1 YPR008W Transcriptional activator involved in adaptation to weak acid stress regulation 1 1 1 RNA-sequencing evidence
WTM2 YOR229W Transcriptional modulator regulation 1 1 1 chromatin immunoprecipitation-chip evidence
TEC1 YBR083W Transcription factor targeting filamentation genes and Ty1 expression regulation 1 1 1 RNA-sequencing evidence
EFB1 YAL003W Translation elongation factor 1 beta regulation 1 1 1 chromatin immunoprecipitation-chip evidence
SIS1 YNL007C Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p regulation 1 1 1 chromatin immunoprecipitation-chip evidence
URH1 YDR400W Uridine nucleosidase (uridine-cytidine N-ribohydrolase) regulation 1 1 1 RNA-sequencing evidence
PRC1 YMR297W Vacuolar carboxypeptidase Y (proteinase C, CPY) regulation 1 1 1 RNA-sequencing evidence
SKN7 YHR206W Nuclear response regulator and transcription factor regulation 1 1 1 chromatin immunoprecipitation-chip evidence
TUP1 YCR084C General repressor of transcription in complex with Cyc8p regulation 1 1 1 DNA to cDNA expression microarray evidence
SOK2 YMR016C Nuclear protein that negatively regulates pseudohyphal differentiation regulation 1 1 1 chromatin immunoprecipitation-chip evidence
PHD1 YKL043W Transcriptional activator that enhances pseudohyphal growth regulation 1 1 1 chromatin immunoprecipitation-chip evidence
CKA1 YIL035C Alpha catalytic subunit of casein kinase 2 (CK2) genetic 1 1 1 Phenotypic Suppression
CKA2 YOR061W Alpha' catalytic subunit of casein kinase 2 (CK2) physical 1 1 1 Biochemical Activity
CKA2 YOR061W Alpha' catalytic subunit of casein kinase 2 (CK2) genetic 1 1 1 Phenotypic Suppression
EAF1 YDR359C Component of the NuA4 histone acetyltransferase complex genetic 1 1 1 Phenotypic Suppression
EAF5 YEL018W Non-essential subunit of the NuA4 acetyltransferase complex genetic 1 1 1 Dosage Growth Defect
CCR4 YAL021C Component of the CCR4-NOT transcriptional complex physical 1 1 1 Affinity Capture-RNA
ABD1 YBR236C Methyltransferase genetic 1 1 1 Negative Genetic
ARO1 YDR127W Pentafunctional arom protein genetic 1 1 1 Negative Genetic
BUD14 YAR014C Protein involved in bud-site selection genetic 1 1 1 Negative Genetic
COX6 YHR051W Subunit VI of cytochrome c oxidase (Complex IV) genetic 1 1 1 Negative Genetic
CTK1 YKL139W Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I) genetic 1 1 1 Negative Genetic
CYR1 YJL005W Adenylate cyclase genetic 1 1 1 Synthetic Rescue
DCP2 YNL118C Catalytic subunit of Dcp1p-Dcp2p decapping enzyme complex genetic 1 1 1 Negative Genetic
ERP2 YAL007C Member of the p24 family involved in ER to Golgi transport genetic 1 1 1 Negative Genetic
HHF1 YBR009C Histone H4 genetic 1 1 1 Phenotypic Suppression
DHH1 YDL160C Cytoplasmic DEAD-box helicase and mRNA decapping activator physical 1 1 1 Affinity Capture-RNA
ISW1 YBR245C ATPase subunit of imitation-switch (ISWI) class chromatin remodelers physical 1 1 1 Affinity Capture-RNA
HSL1 YKL101W Nim1p-related protein kinase genetic 1 1 1 Negative Genetic
COG3 YER157W Essential component of the conserved oligomeric Golgi complex genetic 1 1 1 Negative Genetic
FAB1 YFR019W 1-phosphatidylinositol-3-phosphate 5-kinase genetic 1 1 1 Negative Genetic
HRR25 YPL204W Conserved casein kinase, monopolin subunit physical 1 1 1 Affinity Capture-MS
CMR1 YDL156W Nuclear protein with role in transcription, protein quality control physical 1 1 1 Affinity Capture-MS
INO4 YOL108C Transcription factor involved in phospholipid synthesis genetic 1 1 1 Synthetic Growth Defect
MET18 YIL128W Component of cytosolic iron-sulfur protein assembly (CIA) machinery genetic 1 1 1 Negative Genetic
MNN10 YDR245W Subunit of a Golgi mannosyltransferase complex genetic 1 1 1 Negative Genetic
CDC25 YLR310C Membrane bound guanine nucleotide exchange factor genetic 1 1 1 Phenotypic Suppression
BCY1 YIL033C Regulatory subunit of the cyclic AMP-dependent protein kinase (PKA) physical 1 1 1 PCA
HEK2 YBL032W RNA binding protein involved in asymmetric localization of ASH1 mRNA physical 1 1 1 Affinity Capture-RNA
GET3 YDL100C Guanine nucleotide exchange factor for Gpa1p physical 1 1 1 Affinity Capture-MS
CDC13 YDL220C Single stranded DNA-binding protein found at TG1-3 telomere G-tails genetic 1 1 1 Synthetic Rescue
GAS1 YMR307W Beta-1,3-glucanosyltransferase required for cell wall assembly genetic 1 1 1 Phenotypic Suppression
IRA2 YOL081W GTPase-activating protein genetic 1 1 1 Synthetic Rescue
CNA1 YLR433C Calcineurin A genetic 1 1 1 Negative Genetic
CDC4 YFL009W F-box protein required for both the G1/S and G2/M phase transitions genetic 1 1 1 Phenotypic Suppression
HOG1 YLR113W Mitogen-activated protein kinase involved in osmoregulation genetic 1 1 1 Synthetic Growth Defect
HHT1 YBR010W Histone H3 physical 1 1 1 Affinity Capture-MS
FPK1 YNR047W Ser/Thr protein kinase physical 1 1 1 Biochemical Activity
MMS22 YLR320W Subunit of E3 ubiquitin ligase complex involved in replication repair physical 1 1 1 Affinity Capture-MS
CTK3 YML112W Gamma subunit of C-terminal domain kinase I genetic 1 1 1 Negative Genetic
IRE1 YHR079C Serine-threonine kinase and endoribonuclease genetic 1 1 1 Negative Genetic
BOS1 YLR078C v-SNARE (vesicle specific SNAP receptor) genetic 1 1 1 Negative Genetic
CEP3 YMR168C Essential kinetochore protein genetic 1 1 1 Negative Genetic
HOT1 YMR172W Transcription factor for glycerol biosynthetic genes physical 1 1 1 Two-hybrid
HOT1 YMR172W Transcription factor for glycerol biosynthetic genes genetic 1 1 1 Phenotypic Enhancement
BRE5 YNR051C Ubiquitin protease cofactor genetic 1 1 1 Negative Genetic
IES2 YNL215W Protein that associates with the INO80 chromatin remodeling complex genetic 1 1 1 Negative Genetic
DCD1 YHR144C Deoxycytidine monophosphate (dCMP) deaminase genetic 1 1 1 Positive Genetic
HSF1 YGL073W Trimeric heat shock transcription factor physical 1 1 1 Co-localization
GLN3 YER040W Transcriptional activator in nitrogen catabolite repression system genetic 1 1 1 Negative Genetic
MPT5 YGL178W mRNA-binding protein of the PUF family physical 1 1 1 Affinity Capture-RNA
CSG2 YBR036C Endoplasmic reticulum membrane protein genetic 1 1 1 Negative Genetic
HHT2 YNL031C Histone H3 physical 1 1 1 Affinity Capture-MS
ERT1 YBR239C Transcriptional regulator genetic 1 1 1 Negative Genetic
AUR1 YKL004W Phosphatidylinositol:ceramide phosphoinositol transferase genetic 1 1 1 Synthetic Growth Defect
EAF6 YJR082C Subunit of the NuA4 acetyltransferase complex genetic 1 1 1 Dosage Growth Defect
EAF7 YNL136W Subunit of the NuA4 histone acetyltransferase complex physical 1 1 1 Affinity Capture-Western
MRC1 YCL061C S-phase checkpoint protein required for DNA replication genetic 1 1 1 Phenotypic Suppression
DCC1 YCL016C Subunit of a complex with Ctf8p and Ctf18p genetic 1 1 1 Negative Genetic
HRQ1 YDR291W 3'-5' DNA helicase of the conserved RecQ family genetic 1 1 1 Negative Genetic
KCS1 YDR017C Inositol hexakisphosphate and inositol heptakisphosphate kinase genetic 1 1 1 Negative Genetic
CBS1 YDL069C Mitochondrial translational activator of the COB mRNA genetic 1 1 1 Phenotypic Suppression
PRK1 YIL095W Ser/Thr protein kinase physical 1 1 1 Biochemical Activity
PTK2 YJR059W Serine/threonine protein kinase physical 1 1 1 Biochemical Activity
TPK1 YJL164C cAMP-dependent protein kinase catalytic subunit physical 1 1 1 Biochemical Activity
PKP2 YGL059W Mitochondrial protein kinase physical 1 1 1 Biochemical Activity
TPK2 YPL203W cAMP-dependent protein kinase catalytic subunit physical 1 1 1 Affinity Capture-MS
TRA1 YHR099W Subunit of SAGA and NuA4 histone acetyltransferase complexes physical 1 1 1 Affinity Capture-MS
SMP1 YBR182C MADS-box transcription factor involved in osmotic stress response physical 1 1 1 Two-hybrid
SGF29 YCL010C Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes physical 1 1 1 Affinity Capture-MS
SGF29 YCL010C Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes genetic 1 1 1 Negative Genetic
TAF6 YGL112C Subunit (60 kDa) of TFIID and SAGA complexes physical 1 1 1 Affinity Capture-MS
RPF2 YKR081C Essential protein involved in rRNA maturation and ribosomal assembly physical 1 1 1 Affinity Capture-MS
SPT10 YJL127C Histone H3 acetylase with a role in transcriptional regulation physical 1 1 1 Affinity Capture-MS
SRP54 YPR088C Signal recognition particle (SRP) subunit (homolog of mammalian SRP54) physical 1 1 1 Co-purification
SSB2 YNL209W Cytoplasmic ATPase that is a ribosome-associated molecular chaperone physical 1 1 1 Co-purification
PUF2 YPR042C PUF family mRNA-binding protein physical 1 1 1 Affinity Capture-RNA
WAR1 YML076C Homodimeric Zn2Cys6 zinc finger transcription factor genetic 1 1 1 Synthetic Lethality
RPD3 YNL330C Histone deacetylase, component of both the Rpd3S and Rpd3L complexes genetic 1 1 1 Phenotypic Enhancement
TOR1 YJR066W PIK-related protein kinase and rapamycin target genetic 1 1 1 Synthetic Rescue
SMT3 YDR510W Ubiquitin-like protein of the SUMO family genetic 1 1 1 Positive Genetic
RBK1 YCR036W Ribokinase, phosphorylates ribose to ribose-5-phosphate genetic 1 1 1 Negative Genetic
VPS21 YOR089C Endosomal Rab family GTPase genetic 1 1 1 Negative Genetic
PRP16 YKR086W DEAH-box RNA helicase genetic 1 1 1 Negative Genetic
POB3 YML069W Subunit of the heterodimeric FACT complex (Spt16p-Pob3p) genetic 1 1 1 Negative Genetic
YAK1 YJL141C Serine-threonine protein kinase genetic 1 1 1 Dosage Rescue
SWI5 YDR146C Transcription factor that recruits Mediator and Swi/Snf complexes genetic 1 1 1 Synthetic Growth Defect
SWI6 YLR182W Transcription cofactor genetic 1 1 1 Synthetic Growth Defect
SSN3 YPL042C Component of the RNA polymerase II mediator complex genetic 1 1 1 Positive Genetic
PPG1 YNR032W Serine protein phosphatase involved in formation of FAR complex genetic 1 1 1 Negative Genetic
XBP1 YIL101C Transcriptional repressor genetic 1 1 1 Negative Genetic
PBS2 YJL128C MAP kinase kinase of the HOG signaling pathway genetic 1 1 1 Negative Genetic
RTT109 YLL002W Histone acetyltransferase genetic 1 1 1 Positive Genetic
RAD51 YER095W Strand exchange protein genetic 1 1 1 Positive Genetic
PUT3 YKL015W Transcriptional activator genetic 1 1 1 Negative Genetic
UPC2 YDR213W Sterol regulatory element binding protein genetic 1 1 1 Negative Genetic
UMP1 YBR173C Chaperone required for correct maturation of the 20S proteasome genetic 1 1 1 Synthetic Growth Defect
PSR1 YLL010C Plasma membrane-associated protein phosphatase genetic 1 1 1 Phenotypic Enhancement
PSR2 YLR019W Putative plasma membrane phosphatase genetic 1 1 1 Phenotypic Enhancement
SOD2 YHR008C Mitochondrial manganese superoxide dismutase genetic 1 1 1 Phenotypic Enhancement
RIC1 YLR039C Protein involved in retrograde transport to the cis-Golgi network genetic 1 1 1 Negative Genetic
REV3 YPL167C Catalytic subunit of DNA polymerase zeta genetic 1 1 1 Phenotypic Suppression
YKU80 YMR106C Subunit of telomeric Ku complex (Yku70p-Yku80p) genetic 1 1 1 Phenotypic Suppression
SGT1 YOR057W Cochaperone protein genetic 1 1 1 Positive Genetic
RDI1 YDL135C Rho GDP dissociation inhibitor genetic 1 1 1 Positive Genetic
POL30 YBR088C Proliferating cell nuclear antigen (PCNA) genetic 1 1 1 Negative Genetic
SEC26 YDR238C Essential beta-coat protein of the COPI coatomer genetic 1 1 1 Negative Genetic
SNM1 YDR478W Ribonuclease MRP complex subunit genetic 1 1 1 Negative Genetic
PTI1 YGR156W Essential component of CPF (cleavage and polyadenylation factor) genetic 1 1 1 Negative Genetic
PIN4 YBL051C Protein involved in G2/M phase progression and response to DNA damage genetic 1 1 1 Negative Genetic
PBP4 YDL053C Pbp1p binding protein genetic 1 1 1 Negative Genetic
YER134C YER134C Magnesium-dependent acid phosphatase genetic 1 1 1 Negative Genetic
RMD9 YGL107C Mitochondrial protein that controls mitochondrial gene expression genetic 1 1 1 Negative Genetic
YIL092W YIL092W Putative protein of unknown function genetic 1 1 1 Negative Genetic
PAN6 YIL145C Pantothenate synthase genetic 1 1 1 Negative Genetic
YJR084W YJR084W Protein that forms a complex with Thp3p genetic 1 1 1 Negative Genetic
PEX1 YKL197C AAA-peroxin genetic 1 1 1 Negative Genetic
OMA1 YKR087C Metalloendopeptidase of the mitochondrial inner membrane genetic 1 1 1 Phenotypic Suppression
YPT6 YLR262C Rab family GTPase genetic 1 1 1 Negative Genetic
ROM2 YLR371W Guanine nucleotide exchange factor (GEF) for Rho1p and Rho2p genetic 1 1 1 Negative Genetic
RSN1 YMR266W Membrane protein of unknown function genetic 1 1 1 Negative Genetic
SSN8 YNL025C Cyclin-like component of RNA polymerase II holoenzyme genetic 1 1 1 Negative Genetic
TEA1 YOR337W Ty1 enhancer activator involved in Ty enhancer-mediated transcription genetic 1 1 1 Negative Genetic
YAP5 YIR018W Basic leucine zipper (bZIP) iron-sensing transcription factor genetic 1 1 1 Phenotypic Enhancement
NAT4 YMR069W N alpha-acetyl-transferase genetic 1 1 1 Phenotypic Suppression
YPK1 YKL126W S/T protein kinase genetic 1 1 1 Phenotypic Suppression
UME6 YDR207C Rpd3L histone deacetylase complex subunit genetic 1 1 1 Phenotypic Suppression
SIW14 YNL032W Inositol phosphatase involved in inositol pyrophosphate metabolism genetic 1 1 1 Phenotypic Suppression
SKO1 YNL167C Basic leucine zipper transcription factor of the ATF/CREB family genetic 1 1 1 Phenotypic Enhancement
SGS1 YMR190C RecQ family nucleolar DNA helicase genetic 1 1 1 Negative Genetic
ERG24 YNL280C C-14 sterol reductase genetic 1 1 1 Negative Genetic
FRM2 YCL026C-A Type II nitroreductase, using NADH as reductant genetic 1 1 1 Negative Genetic
ERR1 YOR393W Putative phosphopyruvate hydratase genetic 1 1 1 Negative Genetic
GIS3 YLR094C Protein of unknown function genetic 1 1 1 Negative Genetic
MSH1 YHR120W DNA-binding protein of the mitochondria genetic 1 1 1 Positive Genetic
MRX4 YPL168W Protein that associates with mitochondrial ribosome genetic 1 1 1 Negative Genetic