GEnome-wide tool for Multi-scale Modeling
data Extraction and Representation
for Saccharomyces cerevisiae

List of interactors

Use the search utility to find the interactor you are looking for. By clicking the column headers the table will be sorted on that column. Use shift+click to sort on multiple columns. Default sorting is on number of experiments, number of unique methods and the number of publications, and alphabetical on standard name, in that order.

Standard name	Systematic name	Name description	Type	#Experiments	#Methods	#Publications	Evidence
ADA2	YDR448W	Transcription coactivator	physical	31	3	25	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western
TAF5	YBR198C	Subunit (90 kDa) of TFIID and SAGA complexes	physical	27	3	20	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Co-purification, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Co-purification, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Co-purification
GCN5	YGR252W	Catalytic subunit of ADA and SAGA histone acetyltransferase complexes	physical	26	3	22	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Co-purification
TAF6	YGL112C	Subunit (60 kDa) of TFIID and SAGA complexes	physical	25	3	18	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Co-purification, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Co-purification, Co-purification
NGG1	YDR176W	Subunit of chromatin modifying histone acetyltransferase complexes	physical	23	4	18	Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Co-fractionation, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Co-purification, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Co-purification
SPT8	YLR055C	Subunit of the SAGA transcriptional regulatory complex	physical	23	3	15	Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Co-purification, Affinity Capture-Western, Affinity Capture-MS, Co-purification, Co-purification
HFI1	YPL254W	Adaptor protein required for structural integrity of the SAGA complex	physical	22	4	17	Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Reconstituted Complex, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Co-purification
TAF10	YDR167W	Subunit (145 kDa) of TFIID and SAGA complexes	physical	22	5	16	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Reconstituted Complex, Two-hybrid, Two-hybrid, Affinity Capture-Western, Affinity Capture-MS, Co-purification, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Co-purification, Affinity Capture-MS, Co-purification, Co-purification
SPT20	YOL148C	Subunit of the SAGA transcriptional regulatory complex	physical	21	3	15	Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Affinity Capture-MS
TRA1	YHR099W	Subunit of SAGA and NuA4 histone acetyltransferase complexes	physical	20	5	16	Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Co-purification, Co-fractionation, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Co-localization, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Co-purification, Co-purification
SGF73	YGL066W	Subunit of DUBm module of SAGA and SLIK	physical	20	4	15	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Reconstituted Complex, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Co-purification
TAF9	YMR236W	Subunit (17 kDa) of TFIID and SAGA complexes	physical	18	3	16	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Co-purification
TAF12	YDR145W	Subunit (61/68 kDa) of TFIID and SAGA complexes	physical	18	3	15	Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Co-purification
SPT3	YDR392W	Subunit of the SAGA and SAGA-like transcriptional regulatory complexes	physical	16	3	14	Affinity Capture-Western, Affinity Capture-MS, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Co-purification, Co-purification
UBP8	YMR223W	Ubiquitin-specific protease component of the SAGA acetylation complex	physical	16	2	14	Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS
SUS1	YBR111W-A	Global transcriptional regulator, component of SAGA, TREX-2 complexes	physical	13	2	12	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
SGF29	YCL010C	Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes	physical	13	2	9	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS
SGF11	YPL047W	Integral subunit of SAGA histone acetyltransferase complex	physical	12	2	9	Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
SPT15	YER148W	TATA-binding protein (TBP)	physical	5	5	4	Affinity Capture-MS, Affinity Capture-Western, Co-localization, Co-purification, Reconstituted Complex
GCN4	YEL009C	bZIP transcriptional activator of amino acid biosynthetic genes	physical	4	2	4	Affinity Capture-Western, Reconstituted Complex, Reconstituted Complex, Reconstituted Complex
YAP1	YML007W	Basic leucine zipper (bZIP) transcription factor	physical	4	1	3	Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
SPT3	YDR392W	Subunit of the SAGA and SAGA-like transcriptional regulatory complexes	genetic	3	2	3	Synthetic Rescue, Synthetic Growth Defect, Synthetic Growth Defect
PHO85	YPL031C	Cyclin-dependent kinase	genetic	3	1	3	Synthetic Lethality, Synthetic Lethality, Synthetic Lethality
RTG2	YGL252C	Sensor of mitochondrial dysfunction	physical	3	3	2	Affinity Capture-Western, Co-purification, Affinity Capture-MS
GCN5	YGR252W	Catalytic subunit of ADA and SAGA histone acetyltransferase complexes	genetic	3	2	2	Phenotypic Enhancement, Synthetic Lethality, Synthetic Lethality
SPT8	YLR055C	Subunit of the SAGA transcriptional regulatory complex	genetic	3	2	2	Phenotypic Enhancement, Phenotypic Enhancement, Phenotypic Suppression
ELP3	YPL086C	Subunit of Elongator complex	genetic	3	1	2	Synthetic Growth Defect, Synthetic Growth Defect, Synthetic Growth Defect
RPT2	YDL007W	ATPase of the 19S regulatory particle of the 26S proteasome	physical	2	2	2	Affinity Capture-MS, Reconstituted Complex
HHT2	YNL031C	Histone H3	physical	2	2	2	Affinity Capture-Western, Affinity Capture-MS
SRB6	YBR253W	Subunit of the RNA polymerase II mediator complex	physical	2	1	2	Affinity Capture-MS, Affinity Capture-MS
MPT5	YGL178W	mRNA-binding protein of the PUF family	physical	2	1	2	Affinity Capture-RNA, Affinity Capture-RNA
RPT6	YGL048C	ATPase of the 19S regulatory particle of the 26S proteasome	physical	2	2	1	Affinity Capture-Western, Reconstituted Complex
ARP4	YJL081C	Nuclear actin-related protein involved in chromatin remodeling	genetic	2	1	1	Synthetic Lethality, Synthetic Lethality
ESA1	YOR244W	Catalytic subunit of the histone acetyltransferase complex (NuA4)	genetic	2	1	1	Synthetic Lethality, Synthetic Lethality
EAF1	YDR359C	Component of the NuA4 histone acetyltransferase complex	genetic	2	1	1	Synthetic Lethality, Synthetic Lethality
HDA1	YNL021W	Catalytic subunit of class II HDA1 histone deacetylase complex	genetic	2	1	1	Synthetic Rescue, Synthetic Rescue
EPL1	YFL024C	Subunit of NuA4, an essential histone H4/H2A acetyltransferase complex	genetic	2	1	1	Synthetic Lethality, Synthetic Lethality
ADA2	YDR448W	Transcription coactivator	genetic	2	1	1	Synthetic Growth Defect, Synthetic Growth Defect
HDA3	YPR179C	Subunit of HDA1 histone deacetylase complex	genetic	2	1	1	Synthetic Rescue, Synthetic Rescue
HDA2	YDR295C	Subunit of HDA1 histone deacetylase complex	genetic	2	1	1	Synthetic Rescue, Synthetic Rescue
PHO23	YNL097C	Component of the Rpd3L histone deacetylase complex	genetic	2	1	1	Synthetic Growth Defect, Synthetic Growth Defect
RPD3	YNL330C	Histone deacetylase, component of both the Rpd3S and Rpd3L complexes	genetic	2	1	1	Synthetic Lethality, Synthetic Lethality
SAP30	YMR263W	Component of Rpd3L histone deacetylase complex	genetic	2	1	1	Synthetic Growth Defect, Synthetic Growth Defect
SIN3	YOL004W	Component of both the Rpd3S and Rpd3L histone deacetylase complexes	genetic	2	1	1	Synthetic Lethality, Synthetic Lethality
TAF9	YMR236W	Subunit (17 kDa) of TFIID and SAGA complexes	genetic	2	1	1	Synthetic Lethality, Synthetic Lethality
SWC4	YGR002C	Component of the Swr1p complex that incorporates Htz1p into chromatin	genetic	2	1	1	Synthetic Lethality, Synthetic Lethality
YNG2	YHR090C	Subunit of NuA4, an essential histone acetyltransferase complex	genetic	2	1	1	Synthetic Lethality, Synthetic Lethality
ACS2	YLR153C	Acetyl-coA synthetase isoform	genetic	2	1	1	Synthetic Lethality, Synthetic Lethality
CDC20	YGL116W	Activator of anaphase-promoting complex/cyclosome (APC/C)	genetic	2	1	1	Synthetic Growth Defect, Synthetic Growth Defect
HHT1	YBR010W	Histone H3	genetic	2	1	1	Synthetic Growth Defect, Synthetic Growth Defect
SAS2	YMR127C	Histone acetyltransferase (HAT) catalytic subunit of the SAS complex	genetic	2	1	1	Synthetic Growth Defect, Synthetic Growth Defect
HPA2	YPR193C	Tetrameric histone acetyltransferase	genetic	2	1	1	Synthetic Growth Defect, Synthetic Growth Defect
FKH1	YIL131C	Forkhead family transcription factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
FKH2	YNL068C	Forkhead family transcription factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
DLD3	YEL071W	2-hydroxyglutarate transhydrogenase, and minor D-lactate dehydrogenase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ERG27	YLR100W	3-keto sterol reductase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PGK1	YCR012W	3-phosphoglycerate kinase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HNT1	YDL125C	Adenosine 5'-monophosphoramidase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ADH1	YOL086C	Alcohol dehydrogenase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YPS1	YLR120C	Aspartic protease	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SSE1	YPL106C	ATPase component of heat shock protein Hsp90 chaperone complex	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SSA1	YAL005C	ATPase involved in protein folding and NLS-directed nuclear transport	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
KAR2	YJL034W	ATPase involved in protein import into the ER	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
AGP1	YCL025C	Broad-specificity, low-affinity amino acid permease	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YPP1	YGR198W	Cargo-transport protein involved in endocytosis	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
STE20	YHL007C	Cdc42p-activated signal transducing kinase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RTT105	YER104W	Chaperone for Replication Protein A complex (RPA)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CIT2	YCR005C	Citrate synthase, peroxisomal isozyme involved in glyoxylate cycle	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HLJ1	YMR161W	Co-chaperone for Hsp40p	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
AHA1	YDR214W	Co-chaperone that binds Hsp82p and activates its ATPase activity	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MDJ1	YFL016C	Co-chaperone that stimulates HSP70 protein Ssc1p ATPase activity	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
VPS36	YLR417W	Component of the ESCRT-II complex	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
IES6	YEL044W	Component of the INO80 chromatin remodeling complex	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SEC31	YDL195W	Component of the Sec13p-Sec31p complex of the COPII vesicle coat	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
OYE2	YHR179W	Conserved NADPH oxidoreductase containing flavin mononucleotide (FMN)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
GPP1	YIL053W	Constitutively expressed DL-glycerol-3-phosphate phosphatase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CIP1	YPL014W	Cyclin-dependent kinase inhibitor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SSB1	YDL229W	Cytoplasmic ATPase that is a ribosome-associated molecular chaperone	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ILS1	YBL076C	Cytoplasmic isoleucine-tRNA synthetase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CPR1	YDR155C	Cytoplasmic peptidyl-prolyl cis-trans isomerase (cyclophilin)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ALD6	YPL061W	Cytosolic aldehyde dehydrogenase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
DIP5	YPL265W	Dicarboxylic amino acid permease	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HSP104	YLL026W	Disaggregase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TAH11	YJR046W	DNA replication licensing factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
IRC20	YLR247C	E3 ubiquitin ligase and putative helicase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ENO1	YGR254W	Enolase I, a phosphopyruvate hydratase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ENO2	YHR174W	Enolase II, a phosphopyruvate hydratase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ZPR1	YGR211W	Essential protein with two zinc fingers	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
STI1	YOR027W	Evolutionarily-conserved Hsp90 cochaperone	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
FBA1	YKL060C	Fructose 1,6-bisphosphate aldolase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PSA1	YDL055C	GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TDH2	YJR009C	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 2	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TDH3	YGR192C	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 3	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SPI1	YER150W	GPI-anchored cell wall protein involved in weak acid resistance	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
IRA2	YOL081W	GTPase-activating protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RAS2	YNL098C	GTP-binding protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HCH1	YNL281W	Heat shock protein regulator	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SSA4	YER103W	Heat shock protein that is highly induced upon stress	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
BAP2	YBR068C	High-affinity leucine permease	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
GIR2	YDR152W	Highly-acidic RWD domain-containing cytoplasmic protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
MPC2	YHR162W	Highly conserved subunit of the mitochondrial pyruvate carrier (MPC)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
STE24	YJR117W	Highly conserved zinc metalloprotease	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
APJ1	YNL077W	Hsp40 chaperone with a role in SUMO-mediated protein degradation	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SSA2	YLL024C	HSP70 family ATP-binding protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
FES1	YBR101C	Hsp70 (Ssa1p) nucleotide exchange factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HSP82	YPL240C	Hsp90 chaperone	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PTR2	YKR093W	Integral membrane peptide transporter	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
KAP95	YLR347C	Karyopherin beta	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HXT3	YDR345C	Low affinity glucose transporter of the major facilitator superfamily	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
NUC1	YJL208C	Major mitochondrial nuclease	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PDC1	YLR044C	Major of three pyruvate decarboxylase isozymes	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SED1	YDR077W	Major stress-induced structural GPI-cell wall glycoprotein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PRP46	YPL151C	Member of the NineTeen Complex (NTC)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ADH3	YMR083W	Mitochondrial alcohol dehydrogenase isozyme III	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CIT1	YNR001C	Mitochondrial citrate synthase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HSP10	YOR020C	Mitochondrial matrix co-chaperonin	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CTH1	YDR151C	mRNA binding protein, member of the CCCH zinc finger family	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YDL124W	YDL124W	NADPH-dependent alpha-keto amide reductase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PIN3	YPR154W	Negative regulator of actin nucleation-promoting factor activity	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
VHR2	YER064C	Non-essential nuclear protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YAR1	YPL239W	Nucleocytoplasmic shuttling assembly chaperone	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ASF1	YJL115W	Nucleosome assembly factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HSP78	YDR258C	Oligomeric mitochondrial matrix chaperone	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ARG3	YJL088W	Ornithine carbamoyltransferase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CPR6	YLR216C	Peptidyl-prolyl cis-trans isomerase (cyclophilin)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ARO10	YDR380W	Phenylpyruvate decarboxylase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PRM4	YPL156C	Pheromone-regulated protein proposed to be involved in mating	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PLB1	YMR008C	Phospholipase B (lysophospholipase) involved in lipid metabolism	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YDR210W	YDR210W	Predicted tail-anchored plasma membrane protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SNG1	YGR197C	Protein involved in resistance to nitrosoguanidine and 6-azauracil	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HRK1	YOR267C	Protein kinase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YAP1801	YHR161C	Protein of the AP180 family, involved in clathrin cage assembly	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YBR085C-A	YBR085C-A	Protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SVL3	YPL032C	Protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
AIM26	YKL037W	Protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ATG41	YPL250C	Protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
BSC5	YNR069C	Protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TMA10	YLR327C	Protein of unknown function that associates with ribosomes	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
LST8	YNL006W	Protein required for the transport of Gap1p	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PER33	YLR064W	Protein that localizes to the endoplasmic reticulum	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PMP2	YEL017C-A	Proteolipid associated with plasma membrane H(+)-ATPase (Pma1p)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
VMA3	YEL027W	Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RTS3	YGR161C	Putative component of the protein phosphatase type 2A complex	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YHL044W	YHL044W	Putative integral membrane protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YGR146C-A	YGR146C-A	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YGR210C	YGR210C	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YGL036W	YGL036W	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YHR007C-A	YHR007C-A	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YDR246W-A	YDR246W-A	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
YGR161W-C	YGR161W-C	Putative protein of unknown function	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SKS1	YPL026C	Putative serine/threonine protein kinase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PYC1	YGL062W	Pyruvate carboxylase isoform	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CDC19	YAL038W	Pyruvate kinase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RIE1	YGR250C	RNA binding protein and negative regulator of START	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
EDC2	YER035W	RNA-binding protein that directly activates mRNA decapping	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
REB1	YBR049C	RNA polymerase I enhancer binding protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RPB9	YGL070C	RNA polymerase II subunit B12.6	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
DPB2	YPR175W	Second largest subunit of DNA polymerase II (DNA polymerase epsilon)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
SPO24	YPR036W-A	Small (67 amino acids) protein involved in sporulation	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HSP42	YDR171W	Small heat shock protein (sHSP) with chaperone activity	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
HSP26	YBR072W	Small heat shock protein (sHSP) with chaperone activity	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CUR1	YPR158W	Sorting factor, central regulator of spatial protein quality control	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ASI3	YNL008C	Subunit of the inner nuclear membrane Asi ubiquitin ligase complex	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TAD2	YJL035C	Subunit of tRNA-specific adenosine-34 deaminase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
GPM1	YKL152C	Tetrameric phosphoglycerate mutase	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ERO1	YML130C	Thiol oxidase required for oxidative protein folding in the ER	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
GCR1	YPL075W	Transcriptional activator of genes involved in glycolysis	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
IXR1	YKL032C	Transcriptional repressor that regulates hypoxic genes during normoxia	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
PDR8	YLR266C	Transcription factor	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
ARG80	YMR042W	Transcription factor involved in regulating arginine-responsive genes	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RPN4	YDL020C	Transcription factor that stimulates expression of proteasome genes	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
TPI1	YDR050C	Triose phosphate isomerase, abundant glycolytic enzyme	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
UBI4	YLL039C	Ubiquitin	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
UBC4	YBR082C	Ubiquitin-conjugating enzyme (E2)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
UGP1	YKL035W	UDP-glucose pyrophosphorylase (UGPase)	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
BTN2	YGR142W	v-SNARE binding protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
RSF2	YJR127C	Zinc-finger protein	regulation	1	1	1	chromatin immunoprecipitation-chip evidence
CHD1	YER164W	Chromatin remodeler that regulates various aspects of transcription	physical	1	1	1	Affinity Capture-MS
CBF5	YLR175W	Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs	physical	1	1	1	Affinity Capture-MS
RTF1	YGL244W	Subunit of RNAPII-associated chromatin remodeling Paf1 complex	physical	1	1	1	Affinity Capture-MS
CKA2	YOR061W	Alpha' catalytic subunit of casein kinase 2 (CK2)	physical	1	1	1	Affinity Capture-MS
IKI3	YLR384C	Subunit of Elongator complex	physical	1	1	1	Affinity Capture-MS
IKI3	YLR384C	Subunit of Elongator complex	genetic	1	1	1	Synthetic Growth Defect
RVB1	YDR190C	ATP-dependent DNA helicase, also known as pontin	physical	1	1	1	Affinity Capture-MS
RVB2	YPL235W	ATP-dependent DNA helicase, also known as reptin	physical	1	1	1	Affinity Capture-MS
BRX1	YOL077C	Nucleolar protein	physical	1	1	1	Affinity Capture-MS
ERB1	YMR049C	Constituent of 66S pre-ribosomal particles	physical	1	1	1	Affinity Capture-MS
RPL30	YGL030W	Ribosomal 60S subunit protein L30	physical	1	1	1	Affinity Capture-MS
ADH1	YOL086C	Alcohol dehydrogenase	physical	1	1	1	Affinity Capture-MS
RIX7	YLL034C	Putative ATPase of the AAA family	physical	1	1	1	Affinity Capture-MS
PRP43	YGL120C	RNA helicase in the DEAH-box family	physical	1	1	1	Affinity Capture-MS
POL5	YEL055C	Protein involved in 60S assembly and pre-40S AFs recycling	physical	1	1	1	Affinity Capture-MS
ARC1	YGL105W	Protein that binds tRNA and methionyl- and glutamyl-tRNA synthetases	physical	1	1	1	Affinity Capture-MS
NOP58	YOR310C	Protein involved in producing mature rRNAs and snoRNAs	physical	1	1	1	Affinity Capture-MS
GAR1	YHR089C	Protein component of the H/ACA snoRNP pseudouridylase complex	physical	1	1	1	Affinity Capture-MS
CDC48	YDL126C	AAA ATPase with protein-unfoldase activity	physical	1	1	1	Affinity Capture-MS
RPC40	YPR110C	RNA polymerase subunit AC40	physical	1	1	1	Affinity Capture-MS
RPB5	YBR154C	RNA polymerase subunit ABC27	physical	1	1	1	Affinity Capture-MS
RPA190	YOR341W	RNA polymerase I largest subunit A190	physical	1	1	1	Affinity Capture-MS
RPB4	YJL140W	RNA polymerase II subunit B32	genetic	1	1	1	Synthetic Lethality
SIN4	YNL236W	Subunit of the RNA polymerase II mediator complex	genetic	1	1	1	Synthetic Lethality
DST1	YGL043W	General transcription elongation factor TFIIS	physical	1	1	1	Affinity Capture-Western
SPT16	YGL207W	Subunit of the heterodimeric FACT complex (Spt16p-Pob3p)	physical	1	1	1	Affinity Capture-MS
RPN2	YIL075C	Subunit of the 26S proteasome	physical	1	1	1	Affinity Capture-MS
CFT1	YDR301W	RNA-binding subunit of the mRNA cleavage and polyadenylation factor	physical	1	1	1	Affinity Capture-MS
CCR4	YAL021C	Component of the CCR4-NOT transcriptional complex	physical	1	1	1	Affinity Capture-RNA
ARO1	YDR127W	Pentafunctional arom protein	physical	1	1	1	Affinity Capture-MS
ARP2	YDL029W	Essential component of the Arp2/3 complex	physical	1	1	1	Affinity Capture-MS
ASF1	YJL115W	Nucleosome assembly factor	physical	1	1	1	Affinity Capture-MS
CAP1	YKL007W	Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p)	physical	1	1	1	Affinity Capture-MS
CCL1	YPR025C	Cyclin partner of the cyclin-dependent kinase (CDK) Kin28p	physical	1	1	1	Affinity Capture-MS
CDC3	YLR314C	Component of the septin ring that is required for cytokinesis	physical	1	1	1	Affinity Capture-MS
ELP2	YGR200C	Subunit of Elongator complex	genetic	1	1	1	Synthetic Growth Defect
HHF1	YBR009C	Histone H4	physical	1	1	1	Affinity Capture-Western
DHH1	YDL160C	Cytoplasmic DEAD-box helicase and mRNA decapping activator	physical	1	1	1	Affinity Capture-RNA
HHF2	YNL030W	Histone H4	physical	1	1	1	Affinity Capture-Western
ISW1	YBR245C	ATPase subunit of imitation-switch (ISWI) class chromatin remodelers	physical	1	1	1	Affinity Capture-RNA
CLU1	YMR012W	Subunit of the eukaryotic translation initiation factor 3 (eIF3)	physical	1	1	1	Affinity Capture-MS
GFA1	YKL104C	Glutamine-fructose-6-phosphate amidotransferase	physical	1	1	1	Affinity Capture-MS
MCM6	YGL201C	Protein involved in DNA replication	physical	1	1	1	Affinity Capture-MS
GAL11	YOL051W	Subunit of the RNA polymerase II mediator complex	genetic	1	1	1	Synthetic Lethality
FAB1	YFR019W	1-phosphatidylinositol-3-phosphate 5-kinase	physical	1	1	1	Affinity Capture-MS
MOT1	YPL082C	Essential protein involved in regulation of transcription	physical	1	1	1	Affinity Capture-MS
MOT1	YPL082C	Essential protein involved in regulation of transcription	genetic	1	1	1	Synthetic Lethality
HSC82	YMR186W	Cytoplasmic chaperone of the Hsp90 family	physical	1	1	1	Affinity Capture-MS
MRPL13	YKR006C	Mitochondrial ribosomal protein of the large subunit	physical	1	1	1	Affinity Capture-MS
MEC1	YBR136W	Genome integrity checkpoint protein and PI kinase superfamily member	physical	1	1	1	Affinity Capture-MS
CMR1	YDL156W	Nuclear protein with role in transcription, protein quality control	genetic	1	1	1	Negative Genetic
CMD1	YBR109C	Calmodulin	physical	1	1	1	Affinity Capture-MS
MYO2	YOR326W	Type V myosin motor involved in actin-based transport of cargos	physical	1	1	1	Affinity Capture-MS
MYO4	YAL029C	Type V myosin motor involved in actin-based transport of cargos	physical	1	1	1	Affinity Capture-MS
HTZ1	YOL012C	Histone variant H2AZ	genetic	1	1	1	Synthetic Growth Defect
NUP116	YMR047C	FG-nucleoporin component of central core of the nuclear pore complex	physical	1	1	1	Affinity Capture-MS
HSP42	YDR171W	Small heat shock protein (sHSP) with chaperone activity	physical	1	1	1	Affinity Capture-MS
HSP82	YPL240C	Hsp90 chaperone	physical	1	1	1	Affinity Capture-MS
GLE2	YER107C	RNA export factor associated with the nuclear pore complex (NPC)	physical	1	1	1	Affinity Capture-MS
PRP28	YDR243C	Pre-mRNA splicing factor	genetic	1	1	1	Synthetic Rescue
LEA1	YPL213W	Component of U2 snRNP complex	genetic	1	1	1	Synthetic Growth Defect
PAA1	YDR071C	Polyamine acetyltransferase	physical	1	1	1	Affinity Capture-MS
PAA1	YDR071C	Polyamine acetyltransferase	genetic	1	1	1	Phenotypic Suppression
HTA2	YBL003C	Histone H2A	physical	1	1	1	Affinity Capture-MS
PEP4	YPL154C	Vacuolar aspartyl protease (proteinase A)	physical	1	1	1	Biochemical Activity
NUT2	YPR168W	Subunit of the RNA polymerase II mediator complex	physical	1	1	1	Affinity Capture-MS
RPB9	YGL070C	RNA polymerase II subunit B12.6	genetic	1	1	1	Synthetic Lethality
RPL2A	YFR031C-A	Ribosomal 60S subunit protein L2A	physical	1	1	1	Affinity Capture-MS
PIL1	YGR086C	Eisosome core component	physical	1	1	1	Affinity Capture-MS
SEC26	YDR238C	Essential beta-coat protein of the COPI coatomer	physical	1	1	1	Affinity Capture-MS
RPP2B	YDR382W	Ribosomal protein P2 beta	physical	1	1	1	Affinity Capture-MS
CSE1	YGL238W	Nuclear envelope protein that acts as a recycling factor	physical	1	1	1	Affinity Capture-MS
RIE1	YGR250C	RNA binding protein and negative regulator of START	physical	1	1	1	Affinity Capture-MS
CCT2	YIL142W	Subunit beta of the cytosolic chaperonin Cct ring complex	physical	1	1	1	Affinity Capture-MS
CCT8	YJL008C	Subunit of the cytosolic chaperonin Cct ring complex	physical	1	1	1	Affinity Capture-MS
SNF2	YOR290C	Catalytic subunit of the SWI/SNF chromatin remodeling complex	genetic	1	1	1	Synthetic Lethality
PFK2	YMR205C	Beta subunit of heterooctameric phosphofructokinase	physical	1	1	1	Affinity Capture-MS
SWI5	YDR146C	Transcription factor that recruits Mediator and Swi/Snf complexes	physical	1	1	1	Affinity Capture-MS
TAF14	YPL129W	Subunit of TFIID, TFIIF, INO80, SWI/SNF, and NuA3 complexes	physical	1	1	1	Affinity Capture-MS
TAF8	YML114C	TFIID subunit (65 kDa)	physical	1	1	1	Affinity Capture-MS
UTP20	YBL004W	Component of the small-subunit (SSU) processome	physical	1	1	1	Affinity Capture-MS
SWH1	YAR042W	Protein similar to mammalian oxysterol-binding protein	physical	1	1	1	Affinity Capture-MS
UBR1	YGR184C	E3 ubiquitin ligase (N-recognin)	physical	1	1	1	Affinity Capture-MS
UBP15	YMR304W	Ubiquitin-specific protease involved in protein deubiquitination	physical	1	1	1	Affinity Capture-MS
SVF1	YDR346C	Protein with a potential role in cell survival pathways	physical	1	1	1	Affinity Capture-MS
SUB2	YDL084W	Component of the TREX complex required for nuclear mRNA export	physical	1	1	1	Affinity Capture-MS
TIF1	YKR059W	Translation initiation factor eIF4A	physical	1	1	1	Affinity Capture-MS
SSZ1	YHR064C	Hsp70 protein that interacts with Zuo1p (a DnaJ homolog)	physical	1	1	1	Affinity Capture-MS
TPS1	YBR126C	Synthase subunit of trehalose-6-P synthase/phosphatase complex	physical	1	1	1	Affinity Capture-MS
TEF4	YKL081W	Gamma subunit of translational elongation factor eEF1B	physical	1	1	1	Affinity Capture-MS
TSA1	YML028W	Thioredoxin peroxidase	physical	1	1	1	Affinity Capture-MS
STE12	YHR084W	Transcription factor that is activated by a MAPK signaling cascade	physical	1	1	1	Affinity Capture-MS
TIF4631	YGR162W	Translation initiation factor eIF4G and scaffold protein	physical	1	1	1	Affinity Capture-MS
SRP1	YNL189W	Karyopherin alpha homolog	physical	1	1	1	Affinity Capture-MS
VPS74	YDR372C	Golgi PI4K effector, PtdIns4P sensor, and retention receptor	physical	1	1	1	Affinity Capture-MS
SRV2	YNL138W	CAP (cyclase-associated protein)	physical	1	1	1	Affinity Capture-MS
VMA8	YEL051W	Subunit D of the V1 peripheral membrane domain of V-ATPase	physical	1	1	1	Affinity Capture-MS
SUP35	YDR172W	Translation termination factor eRF3	physical	1	1	1	Affinity Capture-MS
SSA3	YBL075C	ATPase involved in protein folding and the response to stress	physical	1	1	1	Affinity Capture-MS
VMA6	YLR447C	Subunit d of the V0 integral membrane domain of V-ATPase	physical	1	1	1	Affinity Capture-MS
TUB2	YFL037W	Beta-tubulin	physical	1	1	1	Affinity Capture-MS
SSC1	YJR045C	Hsp70 family ATPase	physical	1	1	1	Affinity Capture-MS
TIM13	YGR181W	Mitochondrial intermembrane space protein	physical	1	1	1	Affinity Capture-MS
YNL208W	YNL208W	Protein of unknown function	physical	1	1	1	Affinity Capture-MS
SPT7	YBR081C	Subunit of the SAGA transcriptional regulatory complex	physical	1	1	1	Affinity Capture-MS
YLR157C-B	YLR157C-B	Retrotransposon TYA Gag and TYB Pol genes	physical	1	1	1	Affinity Capture-MS
YEF3	YLR249W	Translation elongation factor 3	physical	1	1	1	Affinity Capture-MS
TDH2	YJR009C	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 2	physical	1	1	1	Affinity Capture-MS
TIM9	YEL020W-A	Essential protein of the mitochondrial intermembrane space	genetic	1	1	1	Synthetic Lethality
TIM12	YBR091C	Essential protein of the inner mitochondrial membrane	genetic	1	1	1	Synthetic Lethality
SWR1	YDR334W	Swi2/Snf2-related ATPase	genetic	1	1	1	Synthetic Growth Defect
SWC3	YAL011W	Protein of unknown function	genetic	1	1	1	Synthetic Growth Defect
VPS72	YDR485C	Htz1p-binding component of the SWR1 complex	genetic	1	1	1	Synthetic Growth Defect
SWC5	YBR231C	Component of the SWR1 complex	genetic	1	1	1	Synthetic Growth Defect
TAF1	YGR274C	TFIID subunit, involved in RNA pol II transcription initiation	genetic	1	1	1	Synthetic Lethality
YPC1	YBR183W	Alkaline ceramidase	genetic	1	1	1	Positive Genetic
NEW1	YPL226W	Translation termination and ribosome biogenesis factor	physical	1	1	1	Affinity Capture-MS
SPT5	YML010W	Spt4p/5p (DSIF) transcription elongation factor complex subunit	physical	1	1	1	Affinity Capture-MS
SCJ1	YMR214W	One of several homologs of bacterial chaperone DnaJ	physical	1	1	1	Affinity Capture-MS
HEK2	YBL032W	RNA binding protein involved in asymmetric localization of ASH1 mRNA	physical	1	1	1	Affinity Capture-RNA
ROK1	YGL171W	RNA-dependent ATPase	physical	1	1	1	Affinity Capture-MS
PUF3	YLL013C	Protein of the mitochondrial outer surface	physical	1	1	1	Affinity Capture-RNA
ADR1	YDR216W	Carbon source-responsive zinc-finger transcription factor	physical	1	1	1	Affinity Capture-MS
IDH1	YNL037C	Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase	physical	1	1	1	Affinity Capture-MS
CNA1	YLR433C	Calcineurin A	physical	1	1	1	Affinity Capture-MS
CDC53	YDL132W	Cullin	physical	1	1	1	Affinity Capture-MS
FAA4	YMR246W	Long chain fatty acyl-CoA synthetase	physical	1	1	1	Affinity Capture-MS
RVS161	YCR009C	Amphiphysin-like lipid raft protein	physical	1	1	1	Affinity Capture-MS
SEC18	YBR080C	AAA ATPase and SNARE disassembly chaperone	physical	1	1	1	Affinity Capture-MS
CCT3	YJL014W	Subunit of the cytosolic chaperonin Cct ring complex	physical	1	1	1	Affinity Capture-MS
HSL7	YBR133C	Protein arginine N-methyltransferase	genetic	1	1	1	Synthetic Lethality
PDC5	YLR134W	Minor isoform of pyruvate decarboxylase	physical	1	1	1	Affinity Capture-MS
RVS167	YDR388W	Calmodulin-binding actin-associated protein	physical	1	1	1	Affinity Capture-Western
FRS2	YFL022C	Alpha subunit of cytoplasmic phenylalanyl-tRNA synthetase	physical	1	1	1	Affinity Capture-MS
RPP0	YLR340W	Conserved ribosomal protein P0 of the ribosomal stalk	physical	1	1	1	Affinity Capture-MS
HHT1	YBR010W	Histone H3	physical	1	1	1	Affinity Capture-Western
RCK1	YGL158W	Protein kinase involved in oxidative stress response	physical	1	1	1	Affinity Capture-MS
SHS1	YDL225W	Component of the septin ring that is required for cytokinesis	physical	1	1	1	Affinity Capture-MS
PGM1	YKL127W	Phosphoglucomutase, minor isoform	physical	1	1	1	Affinity Capture-MS
NUP1	YOR098C	FG-nucleoporin component of central core of the nuclear pore complex	physical	1	1	1	Affinity Capture-MS
SAN1	YDR143C	Ubiquitin-protein ligase	physical	1	1	1	Affinity Capture-MS
SEF1	YBL066C	Putative transcription factor	physical	1	1	1	Affinity Capture-MS
MDJ1	YFL016C	Co-chaperone that stimulates HSP70 protein Ssc1p ATPase activity	physical	1	1	1	Affinity Capture-MS
ATP7	YKL016C	Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase	physical	1	1	1	Affinity Capture-MS
MPD2	YOL088C	Member of the protein disulfide isomerase (PDI) family	physical	1	1	1	Affinity Capture-MS
FOB1	YDR110W	Nucleolar protein that binds the rDNA replication fork barrier site	genetic	1	1	1	Phenotypic Suppression
ELP6	YMR312W	Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex	genetic	1	1	1	Synthetic Growth Defect
ELP4	YPL101W	Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex	genetic	1	1	1	Synthetic Growth Defect
IKI1	YHR187W	Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex	physical	1	1	1	Affinity Capture-MS
ARP6	YLR085C	Actin-related protein that binds nucleosomes	genetic	1	1	1	Synthetic Growth Defect
RPS1A	YLR441C	Ribosomal protein of the small (40S) subunit	physical	1	1	1	Affinity Capture-MS
RPS8A	YBL072C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS7A	YOR096W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS22A	YJL190C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
CSE4	YKL049C	Centromeric histone H3-like protein	physical	1	1	1	Affinity Capture-MS
PLC1	YPL268W	Phospholipase C	genetic	1	1	1	Synthetic Lethality
CLC1	YGR167W	Clathrin light chain	physical	1	1	1	Affinity Capture-MS
GAL4	YPL248C	DNA-binding transcription factor required for activating GAL genes	physical	1	1	1	Reconstituted Complex
HSF1	YGL073W	Trimeric heat shock transcription factor	physical	1	1	1	Affinity Capture-MS
SPT10	YJL127C	Histone H3 acetylase with a role in transcriptional regulation	physical	1	1	1	Affinity Capture-MS
CLA4	YNL298W	Cdc42p-activated signal transducing kinase	physical	1	1	1	Affinity Capture-MS
RPL25	YOL127W	Ribosomal 60S subunit protein L25	physical	1	1	1	Affinity Capture-MS
AUR1	YKL004W	Phosphatidylinositol:ceramide phosphoinositol transferase	genetic	1	1	1	Negative Genetic
RPS2	YGL123W	Protein component of the small (40S) subunit	physical	1	1	1	Affinity Capture-MS
RPS3	YNL178W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
PDR1	YGL013C	Transcription factor that regulates the pleiotropic drug response	genetic	1	1	1	Phenotypic Enhancement
MOG1	YJR074W	Conserved nuclear protein that interacts with GTP-Gsp1p	physical	1	1	1	Affinity Capture-MS
RPS14A	YCR031C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
SNU13	YEL026W	RNA binding protein	physical	1	1	1	Affinity Capture-MS
RPS18A	YDR450W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
MRC1	YCL061C	S-phase checkpoint protein required for DNA replication	physical	1	1	1	Affinity Capture-MS
HSP26	YBR072W	Small heat shock protein (sHSP) with chaperone activity	physical	1	1	1	Affinity Capture-MS
HCM1	YCR065W	Forkhead transcription factor	physical	1	1	1	Affinity Capture-MS
PUF4	YGL014W	Member of the PUF protein family	physical	1	1	1	Affinity Capture-RNA
CHA1	YCL064C	Catabolic L-serine (L-threonine) deaminase	physical	1	1	1	Affinity Capture-MS
RRP15	YPR143W	Nucleolar protein	physical	1	1	1	Affinity Capture-MS
PPN1	YDR452W	Dual endo- and exopolyphosphatase with a role in phosphate metabolism	physical	1	1	1	Affinity Capture-MS
RPP1A	YDL081C	Ribosomal stalk protein P1 alpha	physical	1	1	1	Affinity Capture-MS
NAM2	YLR382C	Mitochondrial leucyl-tRNA synthetase	genetic	1	1	1	Synthetic Growth Defect
CAJ1	YER048C	Nuclear type II J heat shock protein of the E. coli dnaJ family	physical	1	1	1	Affinity Capture-MS
RPL12A	YEL054C	Ribosomal 60S subunit protein L12A	physical	1	1	1	Affinity Capture-MS
RPS9A	YPL081W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPS10A	YOR293W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
RPP2A	YOL039W	Ribosomal protein P2 alpha	physical	1	1	1	Affinity Capture-MS
RPS19A	YOL121C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
APJ1	YNL077W	Hsp40 chaperone with a role in SUMO-mediated protein degradation	physical	1	1	1	Affinity Capture-MS
PSP1	YDR505C	Asn and gln rich protein of unknown function	physical	1	1	1	Affinity Capture-MS
ECM22	YLR228C	Sterol regulatory element binding protein	physical	1	1	1	Affinity Capture-MS
RPS27A	YKL156W	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
OSH6	YKR003W	Oxysterol-binding phosphatidylserine transferase	physical	1	1	1	Affinity Capture-MS
RPP1B	YDL130W	Ribosomal protein P1 beta	physical	1	1	1	Affinity Capture-MS
PDR3	YBL005W	Transcriptional activator of the pleiotropic drug resistance network	genetic	1	1	1	Phenotypic Enhancement
NCB2	YDR397C	Subunit of a heterodimeric NC2 transcription regulator complex	genetic	1	1	1	Synthetic Lethality
MRL1	YPR079W	Membrane protein	physical	1	1	1	Affinity Capture-MS
ERG3	YLR056W	C-5 sterol desaturase	genetic	1	1	1	Phenotypic Suppression
MOT3	YMR070W	Transcriptional repressor, activator	genetic	1	1	1	Dosage Rescue
DIT1	YDR403W	Sporulation-specific enzyme required for spore wall maturation	physical	1	1	1	Affinity Capture-MS
SPT21	YMR179W	Protein with a role in transcriptional silencing	physical	1	1	1	Affinity Capture-MS
RPS15	YOL040C	Protein component of the small (40S) ribosomal subunit	physical	1	1	1	Affinity Capture-MS
PEX35	YGR168C	Regulator of peroxisome abundance	genetic	1	1	1	Synthetic Growth Defect
CTS2	YDR371W	Putative chitinase	physical	1	1	1	Affinity Capture-MS