| PSY2 | YNL201C | Subunit of protein phosphatase PP4 complex | physical | 16 | 3 | 9 | Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Reconstituted Complex, Affinity Capture-Western, Reconstituted Complex | 
            
                | PSY4 | YBL046W | Regulatory subunit of protein phosphatase PP4 | physical | 13 | 3 | 7 | Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Two-hybrid, Two-hybrid, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western | 
            
                | PTC2 | YER089C | Type 2C protein phosphatase (PP2C) | genetic | 9 | 4 | 9 | Phenotypic Enhancement, Negative Genetic, Synthetic Lethality, Synthetic Growth Defect, Synthetic Growth Defect, Negative Genetic, Synthetic Growth Defect, Synthetic Growth Defect, Negative Genetic | 
            
                | SAE2 | YGL175C | Endonuclease required for telomere elongation | genetic | 8 | 4 | 6 | Synthetic Lethality, Negative Genetic, Negative Genetic, Synthetic Growth Defect, Phenotypic Suppression, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | DUN1 | YDL101C | Cell-cycle checkpoint S/T protein kinase | genetic | 7 | 2 | 7 | Negative Genetic, Phenotypic Enhancement, Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | RAD53 | YPL153C | DNA damage response kinase | genetic | 7 | 3 | 6 | Phenotypic Suppression, Dosage Growth Defect, Synthetic Rescue, Synthetic Rescue, Synthetic Rescue, Synthetic Rescue, Synthetic Rescue | 
            
                | RRM3 | YHR031C | DNA helicase involved in rDNA replication and Ty1 transposition | genetic | 7 | 2 | 6 | Synthetic Lethality, Synthetic Lethality, Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | RAD27 | YKL113C | 5' to 3' exonuclease, 5' flap endonuclease | genetic | 6 | 2 | 6 | Synthetic Lethality, Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | DIA2 | YOR080W | Origin-binding F-box protein | genetic | 6 | 3 | 5 | Synthetic Growth Defect, Negative Genetic, Phenotypic Enhancement, Synthetic Growth Defect, Negative Genetic, Negative Genetic | 
            
                | RAD51 | YER095W | Strand exchange protein | genetic | 5 | 3 | 5 | Synthetic Lethality, Negative Genetic, Negative Genetic, Negative Genetic, Phenotypic Enhancement | 
            
                | RAD52 | YML032C | Protein involved in homologous recombination | genetic | 5 | 3 | 5 | Synthetic Lethality, Negative Genetic, Negative Genetic, Positive Genetic, Negative Genetic | 
            
                | TOF1 | YNL273W | Subunit of a replication-pausing checkpoint complex | genetic | 5 | 2 | 5 | Synthetic Lethality, Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | MRE11 | YMR224C | Nuclease subunit of the MRX complex with Rad50p and Xrs2p | genetic | 5 | 2 | 4 | Synthetic Lethality, Negative Genetic, Negative Genetic, Synthetic Lethality, Negative Genetic | 
            
                | HST3 | YOR025W | Sirtuin, histone H3 deacetylase | genetic | 5 | 2 | 4 | Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic, Synthetic Lethality | 
            
                | CHK1 | YBR274W | Serine/threonine kinase and DNA damage checkpoint effector | genetic | 5 | 5 | 1 | Phenotypic Enhancement, Phenotypic Suppression, Synthetic Growth Defect, Negative Genetic, Synthetic Lethality | 
            
                | ASF1 | YJL115W | Nucleosome assembly factor | genetic | 4 | 2 | 4 | Synthetic Lethality, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | MRC1 | YCL061C | S-phase checkpoint protein required for DNA replication | genetic | 4 | 2 | 4 | Synthetic Lethality, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | RTT101 | YJL047C | Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex | genetic | 4 | 1 | 4 | Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | IRA2 | YOL081W | GTPase-activating protein | genetic | 4 | 1 | 4 | Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | CIK1 | YMR198W | Kinesin-associated protein | genetic | 4 | 1 | 4 | Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | ESC2 | YDR363W | Sumo-like domain protein | genetic | 4 | 1 | 4 | Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | BIK1 | YCL029C | Microtubule-associated protein | genetic | 4 | 1 | 3 | Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | PPH22 | YDL188C | Catalytic subunit of protein phosphatase 2A, PP2A | genetic | 3 | 3 | 3 | Phenotypic Enhancement, Synthetic Lethality, Negative Genetic | 
            
                | PPH21 | YDL134C | Catalytic subunit of protein phosphatase 2A, PP2A | genetic | 3 | 3 | 3 | Phenotypic Enhancement, Synthetic Lethality, Negative Genetic | 
            
                | MEC1 | YBR136W | Genome integrity checkpoint protein and PI kinase superfamily member | genetic | 3 | 2 | 3 | Phenotypic Suppression, Phenotypic Suppression, Positive Genetic | 
            
                | RFA2 | YNL312W | Subunit of heterotrimeric Replication Protein A (RPA) | genetic | 3 | 2 | 3 | Positive Genetic, Positive Genetic, Negative Genetic | 
            
                | HTA1 | YDR225W | Histone H2A | physical | 3 | 2 | 3 | Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western | 
            
                | HTA2 | YBL003C | Histone H2A | physical | 3 | 2 | 3 | Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western | 
            
                | DCC1 | YCL016C | Subunit of a complex with Ctf8p and Ctf18p | genetic | 3 | 2 | 3 | Synthetic Lethality, Negative Genetic, Negative Genetic | 
            
                | LSM6 | YDR378C | Lsm (Like Sm) protein | genetic | 3 | 1 | 3 | Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | SPT5 | YML010W | Spt4p/5p (DSIF) transcription elongation factor complex subunit | physical | 3 | 1 | 3 | Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS | 
            
                | SIC1 | YLR079W | Cyclin-dependent kinase inhibitor (CKI) | genetic | 3 | 1 | 3 | Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | PTC3 | YBL056W | Type 2C protein phosphatase (PP2C) | genetic | 3 | 1 | 3 | Synthetic Growth Defect, Synthetic Growth Defect, Synthetic Growth Defect | 
            
                | RTG1 | YOL067C | Transcription factor (bHLH) involved in interorganelle communication | genetic | 3 | 1 | 3 | Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | GET2 | YER083C | Subunit of the GET complex | genetic | 3 | 1 | 3 | Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | BIM1 | YER016W | Microtubule plus end-tracking protein | genetic | 3 | 1 | 3 | Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | MMS1 | YPR164W | Subunit of E3 ubiquitin ligase complex involved in replication repair | genetic | 3 | 1 | 3 | Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | RTT109 | YLL002W | Histone acetyltransferase | genetic | 3 | 3 | 2 | Negative Genetic, Synthetic Rescue, Phenotypic Suppression | 
            
                | RAD9 | YDR217C | DNA damage-dependent checkpoint protein | genetic | 3 | 2 | 2 | Phenotypic Suppression, Synthetic Rescue, Phenotypic Suppression | 
            
                | YKU70 | YMR284W | Subunit of the telomeric Ku complex (Yku70p-Yku80p) | genetic | 3 | 2 | 2 | Synthetic Growth Defect, Negative Genetic, Synthetic Growth Defect | 
            
                | XRS2 | YDR369C | FHA domain-containing component of the Mre11 complex | genetic | 3 | 2 | 2 | Negative Genetic, Synthetic Lethality, Negative Genetic | 
            
                | MTH1 | YDR277C | Negative regulator of the glucose-sensing signal transduction pathway | physical | 3 | 2 | 1 | Affinity Capture-Western, Affinity Capture-Western, Biochemical Activity | 
            
                | DST1 | YGL043W | General transcription elongation factor TFIIS | genetic | 2 | 2 | 2 | Negative Genetic, Positive Genetic | 
            
                | CTF18 | YMR078C | Subunit of a complex with Ctf8p | genetic | 2 | 2 | 2 | Synthetic Lethality, Negative Genetic | 
            
                | TAP42 | YMR028W | Essential protein involved in the TOR signaling pathway | physical | 2 | 2 | 2 | Affinity Capture-Western, Reconstituted Complex | 
            
                | RTG3 | YBL103C | bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | RAD17 | YOR368W | Checkpoint protein | genetic | 2 | 2 | 2 | Phenotypic Suppression, Positive Genetic | 
            
                | SLT2 | YHR030C | Serine/threonine MAP kinase | genetic | 2 | 2 | 2 | Dosage Growth Defect, Positive Genetic | 
            
                | SLX4 | YLR135W | Endonuclease involved in processing DNA | genetic | 2 | 2 | 2 | Negative Genetic, Synthetic Growth Defect | 
            
                | SGS1 | YMR190C | RecQ family nucleolar DNA helicase | genetic | 2 | 2 | 2 | Synthetic Growth Defect, Negative Genetic | 
            
                | CLN1 | YMR199W | G1 cyclin involved in regulation of the cell cycle | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | CSM3 | YMR048W | Replication fork associated factor | genetic | 2 | 2 | 2 | Synthetic Lethality, Negative Genetic | 
            
                | CTF8 | YHR191C | Subunit of a complex with Ctf18p | genetic | 2 | 2 | 2 | Synthetic Lethality, Negative Genetic | 
            
                | NTO1 | YPR031W | Subunit of the NuA3 histone acetyltransferase complex | genetic | 2 | 2 | 2 | Negative Genetic, Positive Genetic | 
            
                | PIF1 | YML061C | DNA helicase, potent G-quadruplex DNA binder/unwinder | genetic | 2 | 2 | 2 | Phenotypic Enhancement, Positive Genetic | 
            
                | CDC73 | YLR418C | Component of the Paf1p complex | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | CEG1 | YGL130W | Guanylyltransferase involved in mRNA 5' capping | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | CKS1 | YBR135W | Cyclin-dependent protein kinase regulatory subunit and adaptor | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | DHH1 | YDL160C | Cytoplasmic DEAD-box helicase and mRNA decapping activator | physical | 2 | 1 | 2 | Affinity Capture-RNA, Affinity Capture-RNA | 
            
                | HTB2 | YBL002W | Histone H2B | physical | 2 | 1 | 2 | Affinity Capture-MS, Affinity Capture-MS | 
            
                | ENO2 | YHR174W | Enolase II, a phosphopyruvate hydratase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | POL12 | YBL035C | B subunit of DNA polymerase alpha-primase complex | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | TDH3 | YGR192C | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 3 | physical | 2 | 1 | 2 | Affinity Capture-MS, Affinity Capture-MS | 
            
                | SSD1 | YDR293C | Translational repressor | physical | 2 | 1 | 2 | Affinity Capture-MS, Affinity Capture-MS | 
            
                | RAD53 | YPL153C | DNA damage response kinase | physical | 2 | 1 | 2 | Biochemical Activity, Biochemical Activity | 
            
                | RAD50 | YNL250W | Subunit of MRX complex with Mre11p and Xrs2p | genetic | 2 | 1 | 2 | Synthetic Lethality, Synthetic Lethality | 
            
                | QCR8 | YJL166W | Subunit 8 of ubiquinol cytochrome-c reductase (Complex III) | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | PRI2 | YKL045W | Subunit of DNA primase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | PSD1 | YNL169C | Phosphatidylserine decarboxylase of the mitochondrial inner membrane | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | ZIP1 | YDR285W | Transverse filament protein of the synaptonemal complex | genetic | 2 | 1 | 2 | Phenotypic Suppression, Phenotypic Suppression | 
            
                | TPK3 | YKL166C | cAMP-dependent protein kinase catalytic subunit | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | TPM1 | YNL079C | Major isoform of tropomyosin | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | ANP1 | YEL036C | Subunit of the alpha-1,6 mannosyltransferase complex | genetic | 2 | 1 | 2 | Positive Genetic, Positive Genetic | 
            
                | CDC20 | YGL116W | Activator of anaphase-promoting complex/cyclosome (APC/C) | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | CSM1 | YCR086W | Nucleolar protein that mediates homolog segregation during meiosis I | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | BAS1 | YKR099W | Myb-related transcription factor | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | NMD2 | YHR077C | Protein involved in the nonsense-mediated mRNA decay (NMD) pathway | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | MPT5 | YGL178W | mRNA-binding protein of the PUF family | physical | 2 | 1 | 2 | Affinity Capture-RNA, Affinity Capture-RNA | 
            
                | DOT1 | YDR440W | Nucleosomal histone H3-Lys79 methylase | genetic | 2 | 1 | 2 | Synthetic Rescue, Synthetic Rescue | 
            
                | PET122 | YER153C | Mitochondrial translational activator specific for the COX3 mRNA | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | ATP10 | YLR393W | Assembly factor for the F0 sector of mitochondrial F1F0 ATP synthase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | KCS1 | YDR017C | Inositol hexakisphosphate and inositol heptakisphosphate kinase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | PMR1 | YGL167C | High affinity Ca2+/Mn2+ P-type ATPase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | MSS1 | YMR023C | Mitochondrial protein | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | COX10 | YPL172C | Heme A:farnesyltransferase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | PDE2 | YOR360C | High-affinity cyclic AMP phosphodiesterase | genetic | 2 | 1 | 2 | Negative Genetic, Negative Genetic | 
            
                | SLD3 | YGL113W | Protein involved in the initiation of DNA replication | genetic | 2 | 2 | 1 | Synthetic Rescue, Phenotypic Suppression | 
            
                | MAF1 | YDR005C | Highly conserved negative regulator of RNA polymerase III | physical | 2 | 2 | 1 | Affinity Capture-Western, Biochemical Activity | 
            
                | CDC13 | YDL220C | Single stranded DNA-binding protein found at TG1-3 telomere G-tails | genetic | 2 | 2 | 1 | Synthetic Growth Defect, Negative Genetic | 
            
                | DBF4 | YDR052C | Regulatory subunit of Cdc7p-Dbf4p kinase complex | genetic | 2 | 2 | 1 | Synthetic Rescue, Phenotypic Suppression | 
            
                | CMR1 | YDL156W | Nuclear protein with role in transcription, protein quality control | genetic | 2 | 1 | 1 | Synthetic Rescue, Synthetic Rescue | 
            
                | SCS7 | YMR272C | Sphingolipid alpha-hydroxylase | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | POL32 | YJR043C | Third subunit of DNA polymerase delta | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | SFP1 | YLR403W | Regulates transcription of ribosomal protein and biogenesis genes | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | MSN2 | YMR037C | Stress-responsive transcriptional activator | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | MIG1 | YGL035C | Transcription factor involved in glucose repression | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | CYC8 | YBR112C | General transcriptional co-repressor | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | POB3 | YML069W | Subunit of the heterodimeric FACT complex (Spt16p-Pob3p) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CKB2 | YOR039W | Beta' regulatory subunit of casein kinase 2 (CK2) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GLC7 | YER133W | Type 1 S/T protein phosphatase (PP1) catalytic subunit | genetic | 1 | 1 | 1 | Synthetic Growth Defect | 
            
                | EAF1 | YDR359C | Component of the NuA4 histone acetyltransferase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CSL4 | YNL232W | Exosome non-catalytic core component | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | FMP52 | YER004W | Protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CBC2 | YPL178W | Small subunit of the heterodimeric cap binding complex with Sto1p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NUT1 | YGL151W | Component of the RNA polymerase II mediator complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CCR4 | YAL021C | Component of the CCR4-NOT transcriptional complex | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | ARO1 | YDR127W | Pentafunctional arom protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | BMH2 | YDR099W | 14-3-3 protein, minor isoform | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | BUD14 | YAR014C | Protein involved in bud-site selection | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CCA1 | YER168C | ATP (CTP):tRNA-specific tRNA nucleotidyltransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CDC36 | YDL165W | Component of the CCR4-NOT core complex, involved in mRNA decapping | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CDC45 | YLR103C | DNA replication initiation factor | genetic | 1 | 1 | 1 | Synthetic Rescue | 
            
                | ERG26 | YGL001C | C-3 sterol dehydrogenase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CDC55 | YGL190C | Regulatory subunit B of protein phosphatase 2A (PP2A) | genetic | 1 | 1 | 1 | Dosage Rescue | 
            
                | CTK1 | YKL139W | Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DNA2 | YHR164C | ATP-dependent 5'-flap endonuclease and DNA helicase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ELP2 | YGR200C | Subunit of Elongator complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | FKS1 | YLR342W | Catalytic subunit of 1,3-beta-D-glucan synthase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GCD7 | YLR291C | Beta subunit of translation initiation factor eIF2B | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DYN1 | YKR054C | Cytoplasmic heavy chain dynein | genetic | 1 | 1 | 1 | Phenotypic Suppression | 
            
                | ISW1 | YBR245C | ATPase subunit of imitation-switch (ISWI) class chromatin remodelers | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | ISW2 | YOR304W | ATP-dependent DNA translocase involved in chromatin remodeling | genetic | 1 | 1 | 1 | Synthetic Growth Defect | 
            
                | END3 | YNL084C | EH domain-containing protein involved in endocytosis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MAL12 | YGR292W | Maltase (alpha-D-glucosidase) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MCM5 | YLR274W | Component of the Mcm2-7 hexameric helicase complex | genetic | 1 | 1 | 1 | Phenotypic Suppression | 
            
                | HSC82 | YMR186W | Cytoplasmic chaperone of the Hsp90 family | genetic | 1 | 1 | 1 | Synthetic Growth Defect | 
            
                | IMG1 | YCR046C | Mitochondrial ribosomal protein of the large subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | IMG2 | YCR071C | Mitochondrial ribosomal protein of the large subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MRPL9 | YGR220C | Mitochondrial ribosomal protein of the large subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GEP3 | YOR205C | Protein required for mitochondrial ribosome small subunit biogenesis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MGM101 | YJR144W | Protein with a role in mitochondrial DNA recombinational repair | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MTR10 | YOR160W | Nuclear import receptor | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MAM33 | YIL070C | Acidic protein of the mitochondrial matrix | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | KAP114 | YGL241W | Karyopherin, responsible for nuclear import of specific proteins | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ARP8 | YOR141C | Nuclear actin-related protein involved in chromatin remodeling | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NHP10 | YDL002C | Non-essential INO80 chromatin remodeling complex subunit | genetic | 1 | 1 | 1 | Synthetic Growth Defect | 
            
                | HSP42 | YDR171W | Small heat shock protein (sHSP) with chaperone activity | genetic | 1 | 1 | 1 | Synthetic Rescue | 
            
                | GIM3 | YNL153C | Subunit of the heterohexameric cochaperone prefoldin complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GIM5 | YML094W | Subunit of the heterohexameric cochaperone prefoldin complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | POL1 | YNL102W | Catalytic subunit of the DNA polymerase I alpha-primase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YHR033W | YHR033W | Putative protein of unknown function | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | TCP1 | YDR212W | Alpha subunit of chaperonin-containing T-complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | STE12 | YHR084W | Transcription factor that is activated by a MAPK signaling cascade | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RRD1 | YIL153W | Peptidyl-prolyl cis/trans-isomerase | physical | 1 | 1 | 1 | Reconstituted Complex | 
            
                | SRS2 | YJL092W | DNA helicase and DNA-dependent ATPase | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | TIP41 | YPR040W | Tap42p-interacting protein | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | SPT4 | YGR063C | Spt4p/5p (DSIF) transcription elongation factor complex subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SSB2 | YNL209W | Cytoplasmic ATPase that is a ribosome-associated molecular chaperone | physical | 1 | 1 | 1 | Co-purification | 
            
                | PUF2 | YPR042C | PUF family mRNA-binding protein | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | TEX1 | YNL253W | Protein involved in mRNA export | genetic | 1 | 1 | 1 | Phenotypic Suppression | 
            
                | SPT23 | YKL020C | ER membrane protein involved in regulation of OLE1 transcription | genetic | 1 | 1 | 1 | Phenotypic Suppression | 
            
                | PRI1 | YIR008C | Subunit of DNA primase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SUS1 | YBR111W-A | Global transcriptional regulator, component of SAGA, TREX-2 complexes | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPN6 | YDL097C | Essential, non-ATPase regulatory subunit of the 26S proteasome lid | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPC40 | YPR110C | RNA polymerase subunit AC40 | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YAF9 | YNL107W | Subunit of NuA4 histone H4 acetyltransferase and SWR1 complexes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RVB2 | YPL235W | ATP-dependent DNA helicase, also known as reptin | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RSC6 | YCR052W | Component of the RSC chromatin remodeling complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RSC8 | YFR037C | Component of the RSC chromatin remodeling complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SPT21 | YMR179W | Protein with a role in transcriptional silencing | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SLX8 | YER116C | Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RAD24 | YER173W | Checkpoint protein | genetic | 1 | 1 | 1 | Phenotypic Suppression | 
            
                | PTC1 | YDL006W | Type 2C protein phosphatase (PP2C) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SIT4 | YDL047W | Ceramide-activated, type 2A-related serine-threonine phosphatase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | REG1 | YDR028C | Regulatory subunit of type 1 protein phosphatase Glc7p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PPN2 | YNL217W | Zn2+-dependent endopolyphosphatase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PTC5 | YOR090C | Mitochondrial type 2C protein phosphatase (PP2C) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RPL13A | YDL082W | Ribosomal 60S subunit protein L13A | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SEC28 | YIL076W | Epsilon-COP subunit of the coatomer | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TOR1 | YJR066W | PIK-related protein kinase and rapamycin target | genetic | 1 | 1 | 1 | Synthetic Rescue | 
            
                | RTS1 | YOR014W | B-type regulatory subunit of protein phosphatase 2A (PP2A) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SPO11 | YHL022C | Meiosis-specific protein required for meiotic recombination | genetic | 1 | 1 | 1 | Phenotypic Suppression | 
            
                | TOP1 | YOL006C | Topoisomerase I | genetic | 1 | 1 | 1 | Synthetic Growth Defect | 
            
                | RPD3 | YNL330C | Histone deacetylase, component of both the Rpd3S and Rpd3L complexes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SMK1 | YPR054W | Middle sporulation-specific mitogen-activated protein kinase (MAPK) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | STB2 | YMR053C | Protein that interacts with Sin3p in a two-hybrid assay | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YCK3 | YER123W | Palmitoylated vacuolar membrane-localized casein kinase I isoform | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TPK1 | YJL164C | cAMP-dependent protein kinase catalytic subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YTA12 | YMR089C | Mitochondrial inner membrane m-AAA protease component | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YDJ1 | YNL064C | Type I HSP40 co-chaperone | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPO31 | YOR116C | RNA polymerase III largest subunit C160 | genetic | 1 | 1 | 1 | Synthetic Rescue | 
            
                | SCH9 | YHR205W | AGC family protein kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RAD14 | YMR201C | Subunit of Nucleotide Excision Repair Factor 1 (NEF1) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RAD33 | YML011C | Protein involved in nucleotide excision repair | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TEL1 | YBL088C | Protein kinase primarily involved in telomere length regulation | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TOP3 | YLR234W | DNA Topoisomerase III | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | REC104 | YHR157W | Protein involved in early stages of meiotic recombination | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | REC114 | YMR133W | Protein involved in early stages of meiotic recombination | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SPT8 | YLR055C | Subunit of the SAGA transcriptional regulatory complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SWD3 | YBR175W | Essential subunit of the COMPASS (Set1C) complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | UBP15 | YMR304W | Ubiquitin-specific protease involved in protein deubiquitination | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | UBP8 | YMR223W | Ubiquitin-specific protease component of the SAGA acetylation complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YKE2 | YLR200W | Subunit of the heterohexameric Gim/prefoldin protein complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SAW1 | YAL027W | 5'- and 3'-flap DNA binding protein | genetic | 1 | 1 | 1 | Synthetic Lethality | 
            
                | RTT107 | YHR154W | BRCA1 C-terminal domain protein needed for recovery from DNA damage | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | STU1 | YBL034C | Microtubule plus-end-tracking non-motor protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SWC3 | YAL011W | Protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | UIP3 | YAR027W | Putative integral membrane protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RPL22A | YLR061W | Ribosomal 60S subunit protein L22A | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VPS5 | YOR069W | Nexin-1 homolog | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PRE4 | YFR050C | Beta 7 subunit of the 20S proteasome | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | UTP25 | YIL091C | Nucleolar protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SEC61 | YLR378C | Conserved ER protein translocation channel | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RFC1 | YOR217W | Subunit of heteropentameric Replication factor C (RF-C) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPT4 | YOR259C | ATPase of the 19S regulatory particle of the 26S proteasome | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPL5 | YPL131W | Ribosomal 60S subunit protein L5 | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SCO1 | YBR037C | Copper-binding protein of mitochondrial inner membrane | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPS6B | YBR181C | Protein component of the small (40S) ribosomal subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YBR284W | YBR284W | Putative metallo-dependent hydrolase superfamily protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SNT1 | YCR033W | Set3C histone deacetylase scaffold | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPP1B | YDL130W | Ribosomal protein P1 beta | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPP2B | YDR382W | Ribosomal protein P2 beta | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPL27B | YDR471W | Ribosomal 60S subunit protein L27B | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VPS60 | YDR486C | Protein involved in late endosome to vacuole transport | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SWI4 | YER111C | DNA binding component of the SBF complex (Swi4p-Swi6p) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SCS2 | YER120W | Integral ER membrane protein, regulates phospholipid metabolism | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YFR018C | YFR018C | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RAD54 | YGL163C | DNA-dependent ATPase that stimulates strand exchange | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RTG2 | YGL252C | Sensor of mitochondrial dysfunction | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | QCR9 | YGR183C | Subunit 9 of ubiquinol cytochrome-c reductase (Complex III) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPS0A | YGR214W | Ribosomal 40S subunit protein S0A | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SSF1 | YHR066W | Constituent of 66S pre-ribosomal particles | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SOL3 | YHR163W | 6-phosphogluconolactonase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SDS3 | YIL084C | Component of the Rpd3L histone deacetylase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VPS53 | YJL029C | Component of the GARP (Golgi-associated retrograde protein) complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VPS24 | YKL041W | One of four subunits of the ESCRT-III complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SAC1 | YKL212W | Phosphatidylinositol phosphate phosphatase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SAP190 | YKR028W | Protein that forms a complex with the Sit4p protein phosphatase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPS21A | YKR057W | Protein component of the small (40S) ribosomal subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VPS13 | YLL040C | Lipid transport protein involved in prospore membrane morphogenesis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | UPS1 | YLR193C | Phosphatidic acid transfer protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPS30A | YLR287C-A | Protein component of the small (40S) ribosomal subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SIW14 | YNL032W | Inositol phosphatase involved in inositol pyrophosphate metabolism | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SWS2 | YNL081C | Putative mitochondrial ribosomal protein of the small subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YNL095C | YNL095C | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YNL140C | YNL140C | Protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YOL057W | YOL057W | Dipeptidyl-peptidase III | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RUP1 | YOR138C | Protein that regulates ubiquitination of Rsp5p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TYW1 | YPL207W | Iron-sulfur protein required for synthesis of wybutosine modified tRNA | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YPR071W | YPR071W | Putative membrane protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SOM1 | YEL059C-A | Subunit of the mitochondrial inner membrane peptidase (IMP) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPO41 | YFL036W | Mitochondrial RNA polymerase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TYW3 | YGL050W | tRNA methyltransferase required for synthesis of wybutosine | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YGL235W | YGL235W | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RSM27 | YGR215W | Mitochondrial ribosomal protein of the small subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PSP2 | YML017W | Asn rich cytoplasmic protein that contains RGG motifs | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPA49 | YNL248C | RNA polymerase I subunit A49 | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TUF1 | YOR187W | Mitochondrial translation elongation factor Tu (EF-Tu) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TAF14 | YPL129W | Subunit of TFIID, TFIIF, INO80, SWI/SNF, and NuA3 complexes | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YNG2 | YHR090C | Subunit of NuA4, an essential histone acetyltransferase complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SIN3 | YOL004W | Component of both the Rpd3S and Rpd3L histone deacetylase complexes | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | UBP12 | YJL197W | Ubiquitin-specific protease | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RSC1 | YGR056W | Component of the RSC chromatin remodeling complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SSN8 | YNL025C | Cyclin-like component of RNA polymerase II holoenzyme | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RAD18 | YCR066W | E3 ubiquitin ligase | genetic | 1 | 1 | 1 | Phenotypic Suppression | 
            
                | SHU2 | YDR078C | Component of Shu complex (aka PCSS complex) | genetic | 1 | 1 | 1 | Synthetic Growth Defect | 
            
                | SHU1 | YHL006C | Component of Shu complex (aka PCSS complex) | genetic | 1 | 1 | 1 | Synthetic Growth Defect | 
            
                | PSY3 | YLR376C | Component of Shu complex (aka PCSS complex) | genetic | 1 | 1 | 1 | Synthetic Growth Defect | 
            
                | TUB4 | YLR212C | Gamma-tubulin | genetic | 1 | 1 | 1 | Synthetic Growth Defect | 
            
                | HSP82 | YPL240C | Hsp90 chaperone | genetic | 1 | 1 | 1 | Synthetic Growth Defect | 
            
                | HTA1 | YDR225W | Histone H2A | genetic | 1 | 1 | 1 | Synthetic Rescue | 
            
                | INO4 | YOL108C | Transcription factor involved in phospholipid synthesis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | POL2 | YNL262W | Catalytic subunit of DNA polymerase (II) epsilon | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MET18 | YIL128W | Component of cytosolic iron-sulfur protein assembly (CIA) machinery | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MRPL6 | YHR147C | Mitochondrial ribosomal protein of the large subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | IWR1 | YDL115C | RNA polymerase II transport factor, conserved from yeast to humans | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DEP1 | YAL013W | Component of the Rpd3L histone deacetylase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PHO23 | YNL097C | Component of the Rpd3L histone deacetylase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MAF1 | YDR005C | Highly conserved negative regulator of RNA polymerase III | genetic | 1 | 1 | 1 | Synthetic Rescue | 
            
                | MNN10 | YDR245W | Subunit of a Golgi mannosyltransferase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CSE1 | YGL238W | Nuclear envelope protein that acts as a recycling factor | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CCT2 | YIL142W | Subunit beta of the cytosolic chaperonin Cct ring complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | HRK1 | YOR267C | Protein kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DIA4 | YHR011W | Probable mitochondrial seryl-tRNA synthetase | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | FAR11 | YNL127W | Protein involved in recovery from cell cycle arrest | physical | 1 | 1 | 1 | PCA | 
            
                | CDC13 | YDL220C | Single stranded DNA-binding protein found at TG1-3 telomere G-tails | physical | 1 | 1 | 1 | Biochemical Activity | 
            
                | CDC5 | YMR001C | Polo-like kinase required for mitotic exit | genetic | 1 | 1 | 1 | Dosage Lethality | 
            
                | ASA1 | YPR085C | Subunit of the ASTRA complex, involved in chromatin remodeling | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HTB1 | YDR224C | Histone H2B | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | HIR3 | YJR140C | Subunit of the HIR complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PBS2 | YJL128C | MAP kinase kinase of the HOG signaling pathway | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MPC54 | YOR177C | Component of the meiotic outer plaque | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | FKH1 | YIL131C | Forkhead family transcription factor | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GET1 | YGL020C | Subunit of the GET complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | COF1 | YLL050C | Cofilin, involved in pH-dependent actin filament depolarization | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PBR1 | YNL181W | Putative oxidoreductase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | DMC1 | YER179W | Meiosis-specific recombinase required for double-strand break repair | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MRS6 | YOR370C | Rab escort protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CCT3 | YJL014W | Subunit of the cytosolic chaperonin Cct ring complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | ELM1 | YKL048C | Serine/threonine protein kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HOG1 | YLR113W | Mitogen-activated protein kinase involved in osmoregulation | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MAG1 | YER142C | 3-methyl-adenine DNA glycosylase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CTF4 | YPR135W | Chromatin-associated protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MEK1 | YOR351C | Meiosis-specific serine/threonine protein kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | BUD7 | YOR299W | Member of the ChAPs family (Chs5p-Arf1p-binding proteins) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MCK1 | YNL307C | Dual-specificity ser/thr and tyrosine protein kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | BTN2 | YGR142W | v-SNARE binding protein | genetic | 1 | 1 | 1 | Synthetic Rescue | 
            
                | DBF2 | YGR092W | Ser/Thr kinase involved in transcription and stress response | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | FUS3 | YBL016W | Mitogen-activated serine/threonine protein kinase involved in mating | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CKI1 | YLR133W | Choline kinase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CDH1 | YGL003C | Activator of anaphase-promoting complex/cyclosome (APC/C) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CDC7 | YDL017W | S/T kinase and catalytic subunit of DDK (Dbf4-dependent kinase) | genetic | 1 | 1 | 1 | Phenotypic Suppression | 
            
                | NUP133 | YKR082W | Subunit of Nup84p subcomplex of nuclear pore complex (NPC) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MMS22 | YLR320W | Subunit of E3 ubiquitin ligase complex involved in replication repair | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NBP2 | YDR162C | Protein involved in the HOG (high osmolarity glycerol) pathway | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CTK3 | YML112W | Gamma subunit of C-terminal domain kinase I | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DCK1 | YLR422W | Dock family protein (Dedicator Of CytoKinesis), homolog of human DOCK1 | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CSM2 | YIL132C | Subunit of the Shu complex (aka PCSS complex) | genetic | 1 | 1 | 1 | Synthetic Growth Defect | 
            
                | ATG1 | YGL180W | Protein serine/threonine kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ATG13 | YPR185W | Regulatory subunit of the Atg1p signaling complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | IPK1 | YDR315C | Inositol 1,3,4,5,6-pentakisphosphate 2-kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MSH5 | YDL154W | Protein of the MutS family | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HSP10 | YOR020C | Mitochondrial matrix co-chaperonin | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PPA2 | YMR267W | Mitochondrial inorganic pyrophosphatase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CNL1 | YDR357C | Subunit of the BLOC-1 complex involved in endosomal maturation | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CDC26 | YFR036W | Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CHL1 | YPL008W | Probable DNA helicase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CBF1 | YJR060W | Basic helix-loop-helix (bHLH) protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PLC1 | YPL268W | Phospholipase C | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | BUB1 | YGR188C | Protein kinase involved in the cell cycle checkpoint into anaphase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CLB5 | YPR120C | B-type cyclin involved in DNA replication during S phase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CTK2 | YJL006C | Beta subunit of C-terminal domain kinase I (CTDK-I) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MDM12 | YOL009C | Mitochondrial outer membrane protein, ERMES complex subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NRG1 | YDR043C | Transcriptional repressor | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PEP7 | YDR323C | Adaptor protein involved in vesicle-mediated vacuolar protein sorting | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MBF1 | YOR298C-A | Transcriptional coactivator | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CSG2 | YBR036C | Endoplasmic reticulum membrane protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MCM7 | YBR202W | Component of the Mcm2-7 hexameric helicase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DBP1 | YPL119C | ATP-dependent RNA helicase of the DEAD-box protein family | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MRI1 | YPR118W | 5'-methylthioribose-1-phosphate isomerase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MNN11 | YJL183W | Subunit of a Golgi mannosyltransferase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | BET4 | YJL031C | Alpha subunit of Type II geranylgeranyltransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MIP1 | YOR330C | Mitochondrial DNA polymerase gamma | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | IXR1 | YKL032C | Transcriptional repressor that regulates hypoxic genes during normoxia | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GLO4 | YOR040W | Mitochondrial glyoxalase II | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HRQ1 | YDR291W | 3'-5' DNA helicase of the conserved RecQ family | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | BUL2 | YML111W | Alpha-arrestin, component of the Rsp5p E3-ubiquitin ligase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PAM1 | YDR251W | Essential protein of unknown function | genetic | 1 | 1 | 1 | Dosage Rescue | 
            
                | MRPL17 | YNL252C | Mitochondrial ribosomal protein of the large subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | LCB5 | YLR260W | Minor sphingoid long-chain base kinase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HOB2 | YPR117W | Protein with structural similarity to lipid transport protein Vps13p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MEF2 | YJL102W | Mitochondrial elongation factor involved in translational elongation | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | KIN4 | YOR233W | Serine/threonine protein kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CYK3 | YDL117W | SH3-domain protein located in the bud neck and cytokinetic actin ring | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MRPS12 | YNR036C | Mitochondrial protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | BSC2 | YDR275W | Protein of unknown function involved in multidrug resistance | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PET130 | YJL023C | Protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | COA3 | YJL062W-A | Mitochondrial protein required for cytochrome c oxidase assembly | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GEP5 | YLR091W | Protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PHB2 | YGR231C | Subunit of the prohibitin complex (Phb1p-Phb2p) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PMS1 | YNL082W | ATP-binding protein required for mismatch repair | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ISR1 | YPR106W | Predicted protein kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HST4 | YDR191W | NAD(+)-dependent protein deacetylase | genetic | 1 | 1 | 1 | Synthetic Lethality | 
            
                | NEJ1 | YLR265C | DNA end-binding protein required for nonhomologous end joining (NHEJ) | genetic | 1 | 1 | 1 | Synthetic Lethality | 
            
                | ALG6 | YOR002W | ER-luminal alpha 1,3 glucosyltransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NCR1 | YPL006W | Vacuolar membrane protein involved with Npc2p in sterol trafficking | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MRPL49 | YJL096W | Mitochondrial ribosomal protein of the large subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ALO1 | YML086C | D-Arabinono-1,4-lactone oxidase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | EST2 | YLR318W | Reverse transcriptase subunit of the telomerase holoenzyme | genetic | 1 | 1 | 1 | Phenotypic Enhancement | 
            
                | PHD1 | YKL043W | Transcriptional activator that enhances pseudohyphal growth | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | NTG2 | YOL043C | DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MDM34 | YGL219C | Mitochondrial component of the ERMES complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HXT2 | YMR011W | High-affinity glucose transporter of the major facilitator superfamily | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PCH2 | YBR186W | Hexameric ring ATPase that remodels chromosome axis protein Hop1p | genetic | 1 | 1 | 1 | Phenotypic Suppression | 
            
                | LGE1 | YPL055C | Protein involved in histone H2B ubiquitination | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MDM32 | YOR147W | Mitochondrial inner membrane protein with similarity to Mdm31p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HER2 | YMR293C | Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | COX23 | YHR116W | Protein that functions in mitochondrial copper homeostasis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | EDS1 | YBR033W | Putative zinc cluster protein, predicted to be a transcription factor | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | IFM1 | YOL023W | Mitochondrial translation initiation factor 2 | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CMI7 | YIL002W-A | Putative mitochondrial protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MPC1 | YGL080W | Highly conserved subunit of mitochondrial pyruvate carrier (MPC) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ECM4 | YKR076W | S-glutathionyl-(chloro)hydroquinone reductase (GS-HQR) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MAL33 | YBR297W | MAL-activator protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ALE1 | YOR175C | Broad-specificity lysophospholipid acyltransferase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MSH1 | YHR120W | DNA-binding protein of the mitochondria | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | LST4 | YKL176C | Subunit of the Lst4p-Lst7p GTPase activating protein complex for Gtr2p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ICE2 | YIL090W | Integral ER membrane protein with type-III transmembrane domains | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ECM8 | YBR076W | Non-essential protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MMO1 | YKL044W | Protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic |