| SIL1 | YOL031C | Nucleotide exchange factor for the ER lumenal Hsp70 chaperone Kar2p | physical | 9 | 4 | 6 | Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Reconstituted Complex, Two-hybrid, Affinity Capture-Western, Reconstituted Complex, Reconstituted Complex, Co-crystal Structure | 
            
                | IRE1 | YHR079C | Serine-threonine kinase and endoribonuclease | physical | 8 | 1 | 6 | Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western | 
            
                | IRE1 | YHR079C | Serine-threonine kinase and endoribonuclease | genetic | 7 | 3 | 5 | Dosage Rescue, Negative Genetic, Negative Genetic, Phenotypic Suppression, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | LHS1 | YKL073W | Molecular chaperone of the endoplasmic reticulum lumen | physical | 6 | 3 | 5 | Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Reconstituted Complex, Two-hybrid | 
            
                | LHS1 | YKL073W | Molecular chaperone of the endoplasmic reticulum lumen | genetic | 6 | 3 | 4 | Dosage Lethality, Synthetic Lethality, Synthetic Lethality, Synthetic Lethality, Negative Genetic, Negative Genetic | 
            
                | SEC63 | YOR254C | Essential subunit of Sec63 complex | genetic | 6 | 3 | 4 | Synthetic Lethality, Synthetic Rescue, Synthetic Rescue, Negative Genetic, Negative Genetic, Negative Genetic | 
            
                | SEC63 | YOR254C | Essential subunit of Sec63 complex | physical | 6 | 3 | 3 | Biochemical Activity, Reconstituted Complex, Reconstituted Complex, Biochemical Activity, Reconstituted Complex, Affinity Capture-Western | 
            
                | SPC2 | YML055W | Subunit of signal peptidase complex | genetic | 5 | 2 | 4 | Negative Genetic, Negative Genetic, Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | OST3 | YOR085W | Gamma subunit of the oligosaccharyltransferase complex of the ER lumen | genetic | 5 | 2 | 3 | Negative Genetic, Negative Genetic, Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | ALG5 | YPL227C | UDP-glucose:dolichyl-phosphate glucosyltransferase | genetic | 5 | 2 | 3 | Negative Genetic, Negative Genetic, Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | SCJ1 | YMR214W | One of several homologs of bacterial chaperone DnaJ | genetic | 4 | 3 | 3 | Synthetic Lethality, Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | ROT2 | YBR229C | Glucosidase II catalytic subunit | genetic | 4 | 3 | 3 | Synthetic Growth Defect, Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | CWH41 | YGL027C | Processing alpha glucosidase I | genetic | 4 | 3 | 3 | Synthetic Growth Defect, Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | SEC66 | YBR171W | Non-essential subunit of Sec63 complex | genetic | 4 | 2 | 3 | Negative Genetic, Negative Genetic, Positive Genetic, Negative Genetic | 
            
                | SPF1 | YEL031W | P-type ATPase, ion transporter of the ER membrane | genetic | 4 | 2 | 3 | Negative Genetic, Negative Genetic, Positive Genetic, Negative Genetic | 
            
                | PRC1 | YMR297W | Vacuolar carboxypeptidase Y (proteinase C, CPY) | physical | 3 | 1 | 3 | Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western | 
            
                | SSA1 | YAL005C | ATPase involved in protein folding and NLS-directed nuclear transport | physical | 3 | 1 | 3 | Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS | 
            
                | BRE5 | YNR051C | Ubiquitin protease cofactor | genetic | 3 | 2 | 2 | Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | ROT1 | YMR200W | Molecular chaperone involved in protein folding in ER | genetic | 3 | 2 | 2 | Synthetic Lethality, Synthetic Lethality, Negative Genetic | 
            
                | SPC1 | YJR010C-A | Subunit of the signal peptidase complex (SPC) | genetic | 3 | 2 | 2 | Negative Genetic, Negative Genetic, Positive Genetic | 
            
                | MNN2 | YBR015C | Alpha-1,2-mannosyltransferase | genetic | 3 | 2 | 2 | Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | SEC22 | YLR268W | R-SNARE protein | genetic | 3 | 2 | 2 | Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | TRS65 | YGR166W | Component of transport protein particle (TRAPP) complex II | genetic | 3 | 2 | 2 | Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | JEM1 | YJL073W | DnaJ-like chaperone required for nuclear membrane fusion during mating | physical | 3 | 2 | 2 | Reconstituted Complex, Reconstituted Complex, Affinity Capture-Western | 
            
                | HAC1 | YFL031W | Basic leucine zipper (bZIP) transcription factor (ATF/CREB1 homolog) | genetic | 3 | 2 | 2 | Dosage Rescue, Negative Genetic, Negative Genetic | 
            
                | HRD3 | YLR207W | ER membrane protein that plays a central role in ERAD | genetic | 3 | 2 | 2 | Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | ALG3 | YBL082C | Dolichol-P-Man dependent alpha(1-3) mannosyltransferase | genetic | 3 | 2 | 2 | Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | ALG6 | YOR002W | ER-luminal alpha 1,3 glucosyltransferase | genetic | 3 | 2 | 2 | Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | DER1 | YBR201W | ER membrane protein that promotes export of misfolded polypeptides | genetic | 3 | 2 | 2 | Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | DIE2 | YGR227W | Dolichyl-phosphoglucose-dependent alpha-1,2-glucosyltransferase | genetic | 3 | 2 | 2 | Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | CDC1 | YDR182W | Putative mannose-ethanolamine phosphate phosphodiesterase | genetic | 3 | 2 | 2 | Synthetic Lethality, Negative Genetic, Negative Genetic | 
            
                | ALG8 | YOR067C | Glucosyl transferase | genetic | 3 | 2 | 2 | Positive Genetic, Negative Genetic, Negative Genetic | 
            
                | HSF1 | YGL073W | Trimeric heat shock transcription factor | regulation | 2 | 2 | 2 | chromatin immunoprecipitation-chip evidence, DNA to cDNA expression microarray evidence | 
            
                | GLO3 | YER122C | ADP-ribosylation factor GTPase activating protein (ARF GAP) | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | IES1 | YFL013C | Subunit of the INO80 chromatin remodeling complex | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | FUN30 | YAL019W | Snf2p family member with ATP-dependent chromatin remodeling activity | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | SIL1 | YOL031C | Nucleotide exchange factor for the ER lumenal Hsp70 chaperone Kar2p | genetic | 2 | 2 | 2 | Synthetic Lethality, Positive Genetic | 
            
                | KAR2 | YJL034W | ATPase involved in protein import into the ER | physical | 2 | 2 | 2 | Co-purification, Two-hybrid | 
            
                | VPS52 | YDR484W | Component of the GARP (Golgi-associated retrograde protein) complex | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | VPS53 | YJL029C | Component of the GARP (Golgi-associated retrograde protein) complex | physical | 2 | 2 | 2 | Affinity Capture-MS, Two-hybrid | 
            
                | MYO1 | YHR023W | Type II myosin heavy chain | physical | 2 | 2 | 2 | Two-hybrid, Affinity Capture-MS | 
            
                | MPS3 | YJL019W | Nuclear envelope protein | physical | 2 | 2 | 2 | Two-hybrid, Affinity Capture-MS | 
            
                | WBP1 | YEL002C | Beta subunit of the oligosaccharyl transferase glycoprotein complex | genetic | 2 | 2 | 2 | Synthetic Lethality, Negative Genetic | 
            
                | SEC11 | YIR022W | 18kDa catalytic subunit of the Signal Peptidase Complex (SPC) | genetic | 2 | 2 | 2 | Synthetic Lethality, Negative Genetic | 
            
                | PEF1 | YGR058W | Penta-EF-hand protein | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | PHO80 | YOL001W | Cyclin | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | OST5 | YGL226C-A | Zeta subunit of the oligosaccharyltransferase complex of the ER lumen | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | UBC7 | YMR022W | Ubiquitin conjugating enzyme | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | MGA2 | YIR033W | ER membrane protein involved in regulation of OLE1 transcription | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | LPD1 | YFL018C | Dihydrolipoamide dehydrogenase | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | SLA1 | YBL007C | Cytoskeletal protein binding protein | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | RER1 | YCL001W | Protein involved in retention of membrane proteins | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | LCL2 | YLR104W | Putative protein of unknown function | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | UBX4 | YMR067C | UBX domain-containing protein that interacts with Cdc48p | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | SGS1 | YMR190C | RecQ family nucleolar DNA helicase | genetic | 2 | 2 | 2 | Synthetic Lethality, Negative Genetic | 
            
                | JEM1 | YJL073W | DnaJ-like chaperone required for nuclear membrane fusion during mating | genetic | 2 | 2 | 2 | Dosage Rescue, Positive Genetic | 
            
                | HRD3 | YLR207W | ER membrane protein that plays a central role in ERAD | physical | 2 | 2 | 2 | Co-fractionation, Affinity Capture-Western | 
            
                | GUP1 | YGL084C | Plasma membrane protein involved in remodeling GPI anchors | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | ALG12 | YNR030W | Alpha-1,6-mannosyltransferase localized to the ER | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | ERD1 | YDR414C | Predicted membrane protein required for lumenal ER protein retention | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | DGK1 | YOR311C | Diacylglycerol kinase | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | CNE1 | YAL058W | Calnexin | genetic | 2 | 2 | 2 | Synthetic Growth Defect, Positive Genetic | 
            
                | ERJ5 | YFR041C | Type I membrane protein with a J domain | genetic | 2 | 2 | 2 | Synthetic Lethality, Positive Genetic | 
            
                | EMP65 | YER140W | Integral membrane protein of the ER | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | ICE2 | YIL090W | Integral ER membrane protein with type-III transmembrane domains | genetic | 2 | 2 | 2 | Positive Genetic, Negative Genetic | 
            
                | DHH1 | YDL160C | Cytoplasmic DEAD-box helicase and mRNA decapping activator | physical | 2 | 1 | 2 | Affinity Capture-RNA, Affinity Capture-RNA | 
            
                | SCJ1 | YMR214W | One of several homologs of bacterial chaperone DnaJ | physical | 2 | 1 | 2 | Affinity Capture-MS, Affinity Capture-MS | 
            
                | ROT1 | YMR200W | Molecular chaperone involved in protein folding in ER | physical | 2 | 1 | 2 | Affinity Capture-Western, Affinity Capture-Western | 
            
                | RPN11 | YFR004W | Metalloprotease subunit of 19S regulatory particle | physical | 2 | 1 | 2 | Affinity Capture-MS, Affinity Capture-MS | 
            
                | RPS2 | YGL123W | Protein component of the small (40S) subunit | physical | 2 | 1 | 2 | Affinity Capture-MS, Affinity Capture-MS | 
            
                | PMT2 | YAL023C | Protein O-mannosyltransferase of the ER membrane | genetic | 2 | 1 | 2 | Positive Genetic, Positive Genetic | 
            
                | ILM1 | YJR118C | Protein of unknown function | genetic | 2 | 1 | 2 | Positive Genetic, Positive Genetic | 
            
                | GCN5 | YGR252W | Catalytic subunit of ADA and SAGA histone acetyltransferase complexes | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | EGD2 | YHR193C | Alpha subunit of the nascent polypeptide-associated complex (NAC) | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | EGD1 | YPL037C | Subunit beta1 of the nascent polypeptide-associated complex (NAC) | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | IPK1 | YDR315C | Inositol 1,3,4,5,6-pentakisphosphate 2-kinase | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | YOS9 | YDR057W | ER quality-control lectin | physical | 2 | 2 | 1 | Affinity Capture-MS, Affinity Capture-Western | 
            
                | SSA2 | YLL024C | HSP70 family ATP-binding protein | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | RPS6B | YBR181C | Protein component of the small (40S) ribosomal subunit | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | PEP7 | YDR323C | Adaptor protein involved in vesicle-mediated vacuolar protein sorting | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | RPS11A | YDR025W | Protein component of the small (40S) ribosomal subunit | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | RPL19B | YBL027W | Ribosomal 60S subunit protein L19B | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | PBP1 | YGR178C | Component of glucose deprivation induced stress granules | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | RPS28B | YLR264W | Protein component of the small (40S) ribosomal subunit | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | SEC28 | YIL076W | Epsilon-COP subunit of the coatomer | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | SRP40 | YKR092C | Nucleolar serine-rich protein | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | RPS23A | YGR118W | Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | VPS75 | YNL246W | NAP family histone chaperone | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | VIP1 | YLR410W | Bifunctional inositol pyrophosphate kinase and phosphatase | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | MPS1 | YDL028C | Dual-specificity kinase | genetic | 2 | 2 | 1 | Positive Genetic, Negative Genetic | 
            
                | ACL4 | YDR161W | Specific assembly chaperone for ribosomal protein Rpl4a/Rpl4b | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | CRD1 | YDL142C | Cardiolipin synthase | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | FLX1 | YIL134W | Mitochondrial flavin adenine dinucleotide transporter | genetic | 2 | 2 | 1 | Negative Genetic, Positive Genetic | 
            
                | ACT1 | YFL039C | Actin, structural protein in cytoskeleton | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | ARC15 | YIL062C | Subunit of the ARP2/3 complex | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | ARC35 | YNR035C | Subunit of the ARP2/3 complex | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | ERO1 | YML130C | Thiol oxidase required for oxidative protein folding in the ER | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | COG3 | YER157W | Essential component of the conserved oligomeric Golgi complex | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | GAS1 | YMR307W | Beta-1,3-glucanosyltransferase required for cell wall assembly | physical | 2 | 1 | 1 | Affinity Capture-Western, Affinity Capture-Western | 
            
                | GAS1 | YMR307W | Beta-1,3-glucanosyltransferase required for cell wall assembly | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | GPI16 | YHR188C | Subunit of the glycosylphosphatidylinositol transamidase complex | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | GEA1 | YJR031C | Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs) | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | SPC3 | YLR066W | Subunit of signal peptidase complex | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | YJR015W | YJR015W | Putative protein of unknown function | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | PKC1 | YBL105C | Protein serine/threonine kinase | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | SSS1 | YDR086C | Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p) | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | STT3 | YGL022W | Catalytic subunit of the oligosaccharyltransferase complex of the ER l | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | YIP1 | YGR172C | Integral membrane protein | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | MSL5 | YLR116W | Component of commitment complex | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | RNA1 | YMR235C | GTPase activating protein (GAP) for Gsp1p | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | SRV2 | YNL138W | CAP (cyclase-associated protein) | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | TPT1 | YOL102C | tRNA 2'-phosphotransferase that catalyzes final step in tRNA splicing | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | KRE5 | YOR336W | Protein required for beta-1,6 glucan biosynthesis | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | SEC62 | YPL094C | Essential subunit of Sec63 complex | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | SAP155 | YFR040W | Protein required for function of the Sit4p protein phosphatase | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | NPR3 | YHL023C | Subunit of the Iml1p/SEACIT complex | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | OCA5 | YHL029C | Cytoplasmic protein required for replication of Brome mosaic virus | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | SLT2 | YHR030C | Serine/threonine MAP kinase | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | OCA2 | YNL056W | Protein of unknown function | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | SWM2 | YNR004W | Protein with a role in snRNA and snoRNA cap trimethylation | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | PET494 | YNR045W | Mitochondrial translational activator specific for the COX3 mRNA | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | GYP1 | YOR070C | Cis-golgi GTPase-activating protein (GAP) for yeast Rabs | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | ABF1 | YKL112W | DNA binding protein with possible chromatin-reorganizing activity | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | GAB1 | YLR459W | Subunit of the glycosylphosphatidylinositol transamidase complex | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | ALG14 | YBR070C | Component of UDP-GlcNAc transferase | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | BIG1 | YHR101C | Integral membrane protein of the endoplasmic reticulum | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | GPI15 | YNL038W | Protein involved in the synthesis of GlcNAc-PI | genetic | 2 | 1 | 1 | Negative Genetic, Negative Genetic | 
            
                | FKH1 | YIL131C | Forkhead family transcription factor | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | HAC1 | YFL031W | Basic leucine zipper (bZIP) transcription factor (ATF/CREB1 homolog) | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | SFP1 | YLR403W | Regulates transcription of ribosomal protein and biogenesis genes | regulation | 1 | 1 | 1 | DNA to cDNA expression microarray evidence | 
            
                | GCN5 | YGR252W | Catalytic subunit of ADA and SAGA histone acetyltransferase complexes | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | RFX1 | YLR176C | Major transcriptional repressor of DNA-damage-regulated genes | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | FKH2 | YNL068C | Forkhead family transcription factor | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | MED2 | YDL005C | Subunit of the RNA polymerase II mediator complex | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | RGR1 | YLR071C | Subunit of the RNA polymerase II mediator complex | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | XBP1 | YIL101C | Transcriptional repressor | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | YAP6 | YDR259C | Basic leucine zipper (bZIP) transcription factor | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | SUA7 | YPR086W | Transcription factor TFIIB | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | MED6 | YHR058C | Subunit of the RNA polymerase II mediator complex | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | SPT3 | YDR392W | Subunit of the SAGA and SAGA-like transcriptional regulatory complexes | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | SPT7 | YBR081C | Subunit of the SAGA transcriptional regulatory complex | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | FHL1 | YPR104C | Regulator of ribosomal protein (RP) transcription | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | SPT6 | YGR116W | Nucleosome remodeling protein | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | UME6 | YDR207C | Rpd3L histone deacetylase complex subunit | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | TUP1 | YCR084C | General repressor of transcription in complex with Cyc8p | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | SRB5 | YGR104C | Subunit of the RNA polymerase II mediator complex | regulation | 1 | 1 | 1 | chromatin immunoprecipitation-chip evidence | 
            
                | DSN1 | YIR010W | Essential component of the outer kinetochore MIND complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | CKA1 | YIL035C | Alpha catalytic subunit of casein kinase 2 (CK2) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CKA2 | YOR061W | Alpha' catalytic subunit of casein kinase 2 (CK2) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | EMW1 | YNL313C | Essential conserved protein with a role in cell wall integrity | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | ARL1 | YBR164C | Soluble GTPase with a role in regulation of membrane traffic | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | DBP7 | YKR024C | Putative ATP-dependent RNA helicase of the DEAD-box family | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DED1 | YOR204W | ATP-dependent DEAD-box RNA helicase with strand-annealing activity | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | CDC48 | YDL126C | AAA ATPase with protein-unfoldase activity | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ECM16 | YMR128W | Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | ARC18 | YLR370C | Subunit of the ARP2/3 complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ARO1 | YDR127W | Pentafunctional arom protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ASC1 | YMR116C | G-protein beta subunit and guanine dissociation inhibitor for Gpa2p | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | CAP1 | YKL007W | Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CCL1 | YPR025C | Cyclin partner of the cyclin-dependent kinase (CDK) Kin28p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CDC28 | YBR160W | Cyclin-dependent kinase (CDK) catalytic subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | CDC55 | YGL190C | Regulatory subunit B of protein phosphatase 2A (PP2A) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | COP1 | YDL145C | Alpha subunit of COPI vesicle coatomer complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CYS4 | YGR155W | Cystathionine beta-synthase | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | EDE1 | YBL047C | Scaffold protein involved in the formation of early endocytic sites | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ELP2 | YGR200C | Subunit of Elongator complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ERP1 | YAR002C-A | Member of the p24 family involved in ER to Golgi transport | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ERP2 | YAL007C | Member of the p24 family involved in ER to Golgi transport | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | ERP2 | YAL007C | Member of the p24 family involved in ER to Golgi transport | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GCN2 | YDR283C | Protein kinase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ERV25 | YML012W | Member of the p24 family involved in ER to Golgi transport | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ESP1 | YGR098C | Separase/separin, a caspase-like cysteine protease | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | CTO1 | YCR015C | Protein required for cold tolerance | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HAT2 | YEL056W | Subunit of the Hat1p-Hat2p histone acetyltransferase complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HHF1 | YBR009C | Histone H4 | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HSM3 | YBR272C | Evolutionarily conserved 19S regulatory particle assembly-chaperone | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HTB2 | YBL002W | Histone H2B | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | COG8 | YML071C | Component of the conserved oligomeric Golgi complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ISW1 | YBR245C | ATPase subunit of imitation-switch (ISWI) class chromatin remodelers | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ISW2 | YOR304W | ATP-dependent DNA translocase involved in chromatin remodeling | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | END3 | YNL084C | EH domain-containing protein involved in endocytosis | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | CSE2 | YNR010W | Subunit of the RNA polymerase II mediator complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CMD1 | YBR109C | Calmodulin | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HTZ1 | YOL012C | Histone variant H2AZ | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | IES5 | YER092W | Non-essential INO80 chromatin remodeling complex subunit | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GIM3 | YNL153C | Subunit of the heterohexameric cochaperone prefoldin complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HSP82 | YPL240C | Hsp90 chaperone | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | GLE2 | YER107C | RNA export factor associated with the nuclear pore complex (NPC) | genetic | 1 | 1 | 1 | Synthetic Growth Defect | 
            
                | HTA2 | YBL003C | Histone H2A | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | GCN20 | YFR009W | Positive regulator of the Gcn2p kinase activity | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | FYV8 | YGR196C | Protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | BZZ1 | YHR114W | SH3 domain protein implicated in regulating actin polymerization | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | INP52 | YNL106C | Polyphosphatidylinositol phosphatase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GCN5 | YGR252W | Catalytic subunit of ADA and SAGA histone acetyltransferase complexes | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | ECM30 | YLR436C | Protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | DRS2 | YAL026C | Trans-golgi network aminophospholipid translocase (flippase) | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | DRS2 | YAL026C | Trans-golgi network aminophospholipid translocase (flippase) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | FLC2 | YAL053W | Putative calcium channel involved in calcium release under hypotonic | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HEK2 | YBL032W | RNA binding protein involved in asymmetric localization of ASH1 mRNA | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GET3 | YDL100C | Guanine nucleotide exchange factor for Gpa1p | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GET4 | YOR164C | Protein involved in inserting tail-anchored proteins into ER membranes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ATP4 | YPL078C | Subunit b of the stator stalk of mitochondrial F1F0 ATP synthase | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | FAR8 | YMR029C | Protein involved in recovery from arrest in response to pheromone | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | IRA2 | YOL081W | GTPase-activating protein | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | IRA2 | YOL081W | GTPase-activating protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CAF20 | YOR276W | Phosphoprotein of the mRNA cap-binding complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | IDH1 | YNL037C | Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CPR6 | YLR216C | Peptidyl-prolyl cis-trans isomerase (cyclophilin) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HIR3 | YJR140C | Subunit of the HIR complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CNB1 | YKL190W | Calcineurin B | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | FKH1 | YIL131C | Forkhead family transcription factor | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GET1 | YGL020C | Subunit of the GET complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GET2 | YER083C | Subunit of the GET complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | AGX1 | YFL030W | Alanine:glyoxylate aminotransferase (AGT) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ADK1 | YDR226W | Adenylate kinase, required for purine metabolism | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DAS1 | YJL149W | Putative SCF ubiquitin ligase F-box protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CDC37 | YDR168W | Essential Hsp90p co-chaperone | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | EST1 | YLR233C | TLC1 RNA-associated factor involved in telomere length regulation | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GYP5 | YPL249C | GTPase-activating protein (GAP) for yeast Rab family members | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | ADD66 | YKL206C | Protein involved in 20S proteasome assembly | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HIR1 | YBL008W | Subunit of the HIR complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HOG1 | YLR113W | Mitogen-activated protein kinase involved in osmoregulation | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | HOG1 | YLR113W | Mitogen-activated protein kinase involved in osmoregulation | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CAC2 | YML102W | Subunit of chromatin assembly factor I (CAF-1), with Rlf2p and Msi1p | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CBP6 | YBR120C | Mitochondrial protein required for translation of the COB mRNA | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HHT1 | YBR010W | Histone H3 | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | BOP2 | YLR267W | Protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | BEM4 | YPL161C | Protein involved in establishment of cell polarity and bud emergence | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ECM33 | YBR078W | GPI-anchored protein involved in efficient glucose uptake | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CPA1 | YOR303W | Small subunit of carbamoyl phosphate synthetase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | DUF1 | YOL087C | Ubiquitin-binding protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GCR2 | YNL199C | Transcriptional activator of genes involved in glycolysis | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | APE3 | YBR286W | Vacuolar aminopeptidase Y | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | DAD2 | YKR083C | Essential subunit of the Dam1 complex (aka DASH complex) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | DUO1 | YGL061C | Essential subunit of the Dam1 complex (aka DASH complex) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HOF1 | YMR032W | F-BAR protein that regulates actin cytoskeleton organization | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | DID4 | YKL002W | Class E Vps protein of the ESCRT-III complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ATG1 | YGL180W | Protein serine/threonine kinase | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | ENT3 | YJR125C | Protein containing an N-terminal epsin-like domain | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | FAR3 | YMR052W | Protein of unknown function | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | GTR1 | YML121W | Subunit of a TORC1-stimulating GTPase and the EGO/GSE complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ASM4 | YDL088C | FG-nucleoporin component of central core of nuclear pore complex (NPC) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GNP1 | YDR508C | Broad specificity amino acid permease | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | GNP1 | YDR508C | Broad specificity amino acid permease | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | IRC6 | YFR043C | Clathrin coat accessory factor | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | FIS1 | YIL065C | Protein involved in mitochondrial fission and peroxisome abundance | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | COG4 | YPR105C | Essential component of the conserved oligomeric Golgi complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | BOS1 | YLR078C | v-SNARE (vesicle specific SNAP receptor) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | COG6 | YNL041C | Component of the conserved oligomeric Golgi complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | COG5 | YNL051W | Component of the conserved oligomeric Golgi complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ELP3 | YPL086C | Subunit of Elongator complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | BRE5 | YNR051C | Ubiquitin protease cofactor | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | ARP6 | YLR085C | Actin-related protein that binds nucleosomes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | DAL81 | YIR023W | Positive regulator of genes in multiple nitrogen degradation pathways | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | IES3 | YLR052W | Subunit of the INO80 chromatin remodeling complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | IES4 | YOR189W | Component of the INO80 chromatiin remodeling complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HPC2 | YBR215W | Subunit of the HIR complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CSE4 | YKL049C | Centromeric histone H3-like protein | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | BUR6 | YER159C | Subunit of a heterodimeric NC2 transcription regulator complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ALF1 | YNL148C | Alpha-tubulin folding protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ATG8 | YBL078C | Ub-like protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | BFR1 | YOR198C | Component of mRNP complexes associated with polyribosomes | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | ELO3 | YLR372W | Elongase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HOP2 | YGL033W | Meiosis-specific protein that localizes to chromosomes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HXK2 | YGL253W | Hexokinase isoenzyme 2 | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ERV41 | YML067C | Protein localized to COPII-coated vesicles | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GOS1 | YHL031C | v-SNARE protein involved in Golgi transport | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PSA1 | YDL055C | GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase) | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SOD1 | YJR104C | Cytosolic copper-zinc superoxide dismutase | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SBA1 | YKL117W | Co-chaperone that binds and regulates Hsp90 family chaperones | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | TGL5 | YOR081C | Bifunctional triacylglycerol lipase and LPA acyltransferase | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | VPS54 | YDR027C | Component of the GARP (Golgi-associated retrograde protein) complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | VPS54 | YDR027C | Component of the GARP (Golgi-associated retrograde protein) complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VPS52 | YDR484W | Component of the GARP (Golgi-associated retrograde protein) complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | TDH1 | YJL052W | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 1 | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | TDH2 | YJR009C | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 2 | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SEC31 | YDL195W | Component of the Sec13p-Sec31p complex of the COPII vesicle coat | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SEC16 | YPL085W | COPII vesicle coat protein required for ER transport vesicle budding | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SEC23 | YPR181C | GTPase-activating protein, stimulates the GTPase activity of Sar1p | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | LYS9 | YNR050C | Saccharopine dehydrogenase (NADP+, L-glutamate-forming) | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SKP1 | YDR328C | Evolutionarily conserved kinetochore protein | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SEC10 | YLR166C | Essential 100kDa subunit of the exocyst complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | YOS9 | YDR057W | ER quality-control lectin | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RPT1 | YKL145W | ATPase of the 19S regulatory particle of the 26S proteasome | physical | 1 | 1 | 1 | Affinity Capture-Western | 
            
                | KRE6 | YPR159W | Glucosyl hydrolase required for beta-1,6-glucan biosynthesis | physical | 1 | 1 | 1 | Affinity Capture-Western | 
            
                | KRE6 | YPR159W | Glucosyl hydrolase required for beta-1,6-glucan biosynthesis | genetic | 1 | 1 | 1 | Synthetic Lethality | 
            
                | RPO41 | YFL036W | Mitochondrial RNA polymerase | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | NAB2 | YGL122C | Nuclear polyadenylated RNA-binding protein | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | SSH1 | YBR283C | Subunit of the Ssh1 translocon complex | physical | 1 | 1 | 1 | PCA | 
            
                | SEC61 | YLR378C | Conserved ER protein translocation channel | physical | 1 | 1 | 1 | PCA | 
            
                | SEC61 | YLR378C | Conserved ER protein translocation channel | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SEC66 | YBR171W | Non-essential subunit of Sec63 complex | physical | 1 | 1 | 1 | Affinity Capture-Western | 
            
                | SEC72 | YLR292C | Non-essential subunit of Sec63 complex | physical | 1 | 1 | 1 | Affinity Capture-Western | 
            
                | SEC72 | YLR292C | Non-essential subunit of Sec63 complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ORC1 | YML065W | Largest subunit of the origin recognition complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SLG1 | YOR008C | Sensor-transducer of the stress-activated PKC1-MPK1 kinase pathway | physical | 1 | 1 | 1 | Affinity Capture-Western | 
            
                | LRS4 | YDR439W | Nucleolar protein that forms a complex with Csm1p | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | LRS4 | YDR439W | Nucleolar protein that forms a complex with Csm1p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SGF29 | YCL010C | Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SUS1 | YBR111W-A | Global transcriptional regulator, component of SAGA, TREX-2 complexes | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SGF73 | YGL066W | Subunit of DUBm module of SAGA and SLIK | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | TAF5 | YBR198C | Subunit (90 kDa) of TFIID and SAGA complexes | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | TAF6 | YGL112C | Subunit (60 kDa) of TFIID and SAGA complexes | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | TAF9 | YMR236W | Subunit (17 kDa) of TFIID and SAGA complexes | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | TAF12 | YDR145W | Subunit (61/68 kDa) of TFIID and SAGA complexes | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | NBP1 | YLR457C | Spindle pole body (SPB) component | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | MIC60 | YKR016W | Component of the MICOS complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | MMM1 | YLL006W | ER integral membrane protein, ERMES complex subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | TEF2 | YBR118W | Translational elongation factor EF-1 alpha | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SSE1 | YPL106C | ATPase component of heat shock protein Hsp90 chaperone complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | TDH3 | YGR192C | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 3 | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SSB1 | YDL229W | Cytoplasmic ATPase that is a ribosome-associated molecular chaperone | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SSA2 | YLL024C | HSP70 family ATP-binding protein | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SPC3 | YLR066W | Subunit of signal peptidase complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | MDM32 | YOR147W | Mitochondrial inner membrane protein with similarity to Mdm31p | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SCC2 | YDR180W | Subunit of cohesin loading factor (Scc2p-Scc4p) | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | RTT103 | YDR289C | Protein involved in transcription termination by RNA polymerase II | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | RTT103 | YDR289C | Protein involved in transcription termination by RNA polymerase II | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MAD1 | YGL086W | Coiled-coil protein involved in spindle-assembly checkpoint | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | VAS1 | YGR094W | Mitochondrial and cytoplasmic valyl-tRNA synthetase | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | YTA7 | YGR270W | Chromatin-binding ATPase that regulates histone gene expression | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | TAF1 | YGR274C | TFIID subunit, involved in RNA pol II transcription initiation | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | TDA11 | YHR159W | Putative protein of unknown function | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | SKN7 | YHR206W | Nuclear response regulator and transcription factor | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | OM45 | YIL136W | Mitochondrial outer membrane protein of unknown function | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | MPP10 | YJR002W | Component of the SSU processome and 90S preribosome | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | RAD26 | YJR035W | Protein involved in transcription-coupled nucleotide excision repair | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | YKL050C | YKL050C | Protein of unknown function | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | YKE2 | YLR200W | Subunit of the heterohexameric Gim/prefoldin protein complex | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | VPS20 | YMR077C | Myristoylated subunit of the ESCRT-III complex | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | NOP2 | YNL061W | rRNA m5C methyltransferase | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | SEC2 | YNL272C | Guanyl-nucleotide exchange factor for the small G-protein Sec4p | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | SEC2 | YNL272C | Guanyl-nucleotide exchange factor for the small G-protein Sec4p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MGM1 | YOR211C | Mitochondrial GTPase, present in complex with Ugo1p and Fzo1p | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | SNF2 | YOR290C | Catalytic subunit of the SWI/SNF chromatin remodeling complex | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | SNF2 | YOR290C | Catalytic subunit of the SWI/SNF chromatin remodeling complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SCD5 | YOR329C | Protein required for normal actin organization and endocytosis | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | SKS1 | YPL026C | Putative serine/threonine protein kinase | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | LGE1 | YPL055C | Protein involved in histone H2B ubiquitination | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | YTA6 | YPL074W | Putative ATPase of the CDC48/PAS1/SEC18 (AAA) family | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | SPC29 | YPL124W | Inner plaque spindle pole body (SPB) component | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | NIP100 | YPL174C | Large subunit of the dynactin complex | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | YPL216W | YPL216W | Putative protein of unknown function | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | SBP1 | YHL034C | Protein that binds eIF4G and has a role in repression of translation | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | PEP4 | YPL154C | Vacuolar aspartyl protease (proteinase A) | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | PEP4 | YPL154C | Vacuolar aspartyl protease (proteinase A) | genetic | 1 | 1 | 1 | Phenotypic Enhancement | 
            
                | PUF3 | YLL013C | Protein of the mitochondrial outer surface | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | PXA1 | YPL147W | Subunit of heterodimeric peroxisomal ABC transport complex, with Pxa2p | physical | 1 | 1 | 1 | PCA | 
            
                | YBT1 | YLL048C | Transporter of the ATP-binding cassette (ABC) family | physical | 1 | 1 | 1 | PCA | 
            
                | PUF2 | YPR042C | PUF family mRNA-binding protein | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | TOM1 | YDR457W | E3 ubiquitin ligase of the hect-domain class | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RVB2 | YPL235W | ATP-dependent DNA helicase, also known as reptin | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RVB1 | YDR190C | ATP-dependent DNA helicase, also known as pontin | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | PMP1 | YCR024C-A | Regulatory subunit for the plasma membrane H(+)-ATPase Pma1p | physical | 1 | 1 | 1 | Affinity Capture-RNA | 
            
                | PMP1 | YCR024C-A | Regulatory subunit for the plasma membrane H(+)-ATPase Pma1p | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SCP160 | YJL080C | Essential RNA-binding G protein effector of mating response pathway | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | TMA46 | YOR091W | Protein of unknown function that associates with translating ribosomes | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | MID1 | YNL291C | Stretch-activated Ca2+-permeable cation channel | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SUP35 | YDR172W | Translation termination factor eRF3 | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | NUP1 | YOR098C | FG-nucleoporin component of central core of the nuclear pore complex | physical | 1 | 1 | 1 | Affinity Capture-Western | 
            
                | SAM50 | YNL026W | Component of the Sorting and Assembly Machinery (SAM) complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RCK2 | YLR248W | Protein kinase involved in response to oxidative and osmotic stress | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | UTP10 | YJL109C | Nucleolar protein | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SLP1 | YOR154W | Glycosylated integral ER membrane protein of unknown function | physical | 1 | 1 | 1 | Affinity Capture-Western | 
            
                | SLP1 | YOR154W | Glycosylated integral ER membrane protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MOG1 | YJR074W | Conserved nuclear protein that interacts with GTP-Gsp1p | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | TOM22 | YNL131W | Component of the TOM (Translocase of Outer Membrane) complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SMC6 | YLR383W | Subunit of the SMC5-SMC6 complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SIS1 | YNL007C | Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS0A | YGR214W | Ribosomal 40S subunit protein S0A | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS1A | YLR441C | Ribosomal protein of the small (40S) subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS6A | YPL090C | Protein component of the small (40S) ribosomal subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS7A | YOR096W | Protein component of the small (40S) ribosomal subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS8A | YBL072C | Protein component of the small (40S) ribosomal subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS9A | YPL081W | Protein component of the small (40S) ribosomal subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS10A | YOR293W | Protein component of the small (40S) ribosomal subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS12 | YOR369C | Protein component of the small (40S) ribosomal subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS12 | YOR369C | Protein component of the small (40S) ribosomal subunit | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RPS13 | YDR064W | Protein component of the small (40S) ribosomal subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS15 | YOL040C | Protein component of the small (40S) ribosomal subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS17A | YML024W | Ribosomal protein 51 (rp51) of the small (40s) subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS18A | YDR450W | Protein component of the small (40S) ribosomal subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS19A | YOL121C | Protein component of the small (40S) ribosomal subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS20 | YHL015W | Protein component of the small (40S) ribosomal subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS22A | YJL190C | Protein component of the small (40S) ribosomal subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPL25 | YOL127W | Ribosomal 60S subunit protein L25 | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPL26A | YLR344W | Ribosomal 60S subunit protein L26A | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS27A | YKL156W | Protein component of the small (40S) ribosomal subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPL31A | YDL075W | Ribosomal 60S subunit protein L31A | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS3 | YNL178W | Protein component of the small (40S) ribosomal subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | RPS14A | YCR031C | Protein component of the small (40S) ribosomal subunit | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | SKN1 | YGR143W | Protein involved in sphingolipid biosynthesis | genetic | 1 | 1 | 1 | Synthetic Lethality | 
            
                | STP22 | YCL008C | Component of the ESCRT-I complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RUD3 | YOR216C | Golgi matrix protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SKY1 | YMR216C | SR protein kinase (SRPK) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MSC1 | YML128C | Protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VPS38 | YLR360W | Part of a Vps34p phosphatidylinositol 3-kinase complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PMR1 | YGL167C | High affinity Ca2+/Mn2+ P-type ATPase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MPD1 | YOR288C | Member of the protein disulfide isomerase (PDI) family | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | LEM3 | YNL323W | Membrane protein of the plasma membrane and ER | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SIF2 | YBR103W | WD40 repeat-containing subunit of Set3C histone deacetylase complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VPS72 | YDR485C | Htz1p-binding component of the SWR1 complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | UBC4 | YBR082C | Ubiquitin-conjugating enzyme (E2) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VPS1 | YKR001C | Dynamin-like GTPase required for vacuolar sorting | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VPS28 | YPL065W | Component of the ESCRT-I complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SNT1 | YCR033W | Set3C histone deacetylase scaffold | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VPS30 | YPL120W | Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | NHX1 | YDR456W | Na+/H+ and K+/H+ exchanger | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RTT106 | YNL206C | Histone chaperone | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VPS74 | YDR372C | Golgi PI4K effector, PtdIns4P sensor, and retention receptor | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TSR2 | YLR435W | Protein with a potential role in pre-rRNA processing | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SWC5 | YBR231C | Component of the SWR1 complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | UFD2 | YDL190C | Ubiquitin (Ub) chain assembly factor (E4) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SUM1 | YDR310C | Transcriptional repressor that regulates middle-sporulation genes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VPS3 | YDR495C | Component of CORVET membrane tethering complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PMT1 | YDL095W | Protein O-mannosyltransferase of the ER membrane | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | OPI10 | YOL032W | Protein with a possible role in phospholipid biosynthesis | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | USA1 | YML029W | Scaffold subunit of the Hrd1p ubiquitin ligase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VPS51 | YKR020W | Component of the GARP (Golgi-associated retrograde protein) complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TED1 | YIL039W | GPI-glycan remodelase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PSD2 | YGR170W | Phosphatidylserine decarboxylase of the Golgi and vacuolar membranes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | UBX2 | YML013W | Bridging factor involved in ER-associated protein degradation (ERAD) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VHR2 | YER064C | Non-essential nuclear protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SOP4 | YJL192C | ER-membrane protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RPS16A | YMR143W | Protein component of the small (40S) ribosomal subunit | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | NMD4 | YLR363C | Protein that may be involved in nonsense-mediated mRNA decay | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TMA19 | YKL056C | Protein that associates with ribosomes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MYG1 | YER156C | Protein involved in mitochondrial function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YPL068C | YPL068C | Protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | OLA1 | YBR025C | P-loop ATPase with similarity to human OLA1 and bacterial YchF | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TRP3 | YKL211C | Indole-3-glycerol-phosphate synthase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | KTI12 | YKL110C | Protein that plays a role in modification of tRNA wobble nucleosides | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RPN10 | YHR200W | Proteasome polyubiquitin receptor | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YJR084W | YJR084W | Protein that forms a complex with Thp3p | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | THI6 | YPL214C | Thiamine-phosphate diphosphorylase and hydroxyethylthiazole kinase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | UBR1 | YGR184C | E3 ubiquitin ligase (N-recognin) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MEH1 | YKR007W | Subunit of the EGO/GSE complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YML108W | YML108W | Protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TOF2 | YKR010C | Protein required for rDNA silencing and mitotic rDNA condensation | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VMS1 | YDR049W | Peptidyl-tRNA hydrolase that releases stalled peptides from ribosomes, | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TRM1 | YDR120C | tRNA methyltransferase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PTK2 | YJR059W | Serine/threonine protein kinase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PRM2 | YIL037C | Pheromone-regulated protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | UBR2 | YLR024C | Cytoplasmic ubiquitin-protein ligase (E3) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YDL157C | YDL157C | Putative protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RPS4B | YHR203C | Protein component of the small (40S) ribosomal subunit | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PTR2 | YKR093W | Integral membrane peptide transporter | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | OYE2 | YHR179W | Conserved NADPH oxidoreductase containing flavin mononucleotide (FMN) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | NPL4 | YBR170C | Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SQS1 | YNL224C | Protein that stimulates the ATPase and helicase activities of Prp43p | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RLF2 | YPR018W | Largest subunit (p90) of the Chromatin Assembly Complex (CAF-1) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ROX1 | YPR065W | Heme-dependent repressor of hypoxic genes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MSI1 | YBR195C | Subunit of chromatin assembly factor I (CAF-1) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SSA3 | YBL075C | ATPase involved in protein folding and the response to stress | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PTC2 | YER089C | Type 2C protein phosphatase (PP2C) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YPR084W | YPR084W | Putative protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MDY2 | YOL111C | Protein involved in inserting tail-anchored proteins into ER membranes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YMR209C | YMR209C | Putative S-adenosylmethionine-dependent methyltransferase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YBR137W | YBR137W | Protein with a role in ER delivery of tail-anchored membrane proteins | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | REX4 | YOL080C | Putative RNA exonuclease | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SET3 | YKR029C | Defining member of the SET3 histone deacetylase complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YCK1 | YHR135C | Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SPE3 | YPR069C | Spermidine synthase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PHO86 | YJL117W | Endoplasmic reticulum (ER) resident protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SGT2 | YOR007C | Glutamine-rich cytoplasmic cochaperone | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SBH2 | YER019C-A | Ssh1p-Sss1p-Sbh2p complex component | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RTT10 | YPL183C | WD40 domain-containing protein involved in endosomal recycling | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RTN1 | YDR233C | Reticulon protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VTC1 | YER072W | Regulatory subunit of the vacuolar transporter chaperone (VTC) complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YLR287C | YLR287C | Putative protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MVP1 | YMR004W | Protein required for sorting proteins to the vacuole | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | NFT1 | YKR103W | Putative transporter of the MRP subfamily | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | LEU3 | YLR451W | Zinc-knuckle transcription factor, repressor and activator | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MRX20 | YFR045W | Putative mitochondrial transport protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SWP82 | YFL049W | Member of the SWI/SNF chromatin remodeling complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PTP1 | YDL230W | Phosphotyrosine-specific protein phosphatase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VPS71 | YML041C | Nucleosome-binding component of the SWR1 complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | UME1 | YPL139C | Component of both the Rpd3S and Rpd3L histone deacetylase complexes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SGM1 | YJR134C | Protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RAD23 | YEL037C | Protein with ubiquitin-like N terminus | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YPR063C | YPR063C | ER-localized protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | WSC4 | YHL028W | Endoplasmic reticulum (ER) membrane protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | LOG1 | YJL055W | Putative protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MKC7 | YDR144C | GPI-anchored aspartyl protease | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SHB17 | YKR043C | Sedoheptulose bisphosphatase involved in riboneogenesis | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VTC4 | YJL012C | Vacuolar membrane polyphosphate polymerase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TRM7 | YBR061C | 2'-O-ribose methyltransferase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SRF1 | YDL133W | Regulator of phospholipase D (Spo14p) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SWC3 | YAL011W | Protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YET1 | YKL065C | Endoplasmic reticulum transmembrane protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YIL055C | YIL055C | Putative protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PPH21 | YDL134C | Catalytic subunit of protein phosphatase 2A, PP2A | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SSA4 | YER103W | Heat shock protein that is highly induced upon stress | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SPE4 | YLR146C | Spermine synthase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YIP3 | YNL044W | Protein localized to COPII vesicles | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | NHP6A | YPR052C | High-mobility group (HMG) protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MTC5 | YDR128W | Subunit of SEACAT, a subcomplex of the SEA complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MNN4 | YKL201C | Putative positive regulator of mannosylphosphate transferase Mnn6p | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YAP5 | YIR018W | Basic leucine zipper (bZIP) iron-sensing transcription factor | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YCK2 | YNL154C | Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MAF1 | YDR005C | Highly conserved negative regulator of RNA polymerase III | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MNN5 | YJL186W | Alpha-1,2-mannosyltransferase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SSM4 | YIL030C | Membrane-embedded ubiquitin-protein ligase and retrotranslocase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TIR3 | YIL011W | Cell wall mannoprotein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MNS1 | YJR131W | Alpha-1,2-mannosidase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RAV1 | YJR033C | Subunit of RAVE complex (Rav1p, Rav2p, Skp1p) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PET18 | YCR020C | Protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MNL1 | YHR204W | Alpha-1,2-specific exomannosidase of the endoplasmic reticulum | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PEP8 | YJL053W | Vacuolar protein component of the retromer | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SVP26 | YHR181W | ER exit adaptor for Golgi mannosyltransferases | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RGP1 | YDR137W | Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SFB2 | YNL049C | Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PPT1 | YGR123C | Protein serine/threonine phosphatase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YLR278C | YLR278C | Zinc-cluster protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TRS85 | YDR108W | Component of transport protein particle (TRAPP) complex III | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SED4 | YCR067C | Integral ER membrane protein that stimulates Sar1p GTPase activity | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | VPS29 | YHR012W | Subunit of the membrane-associated retromer complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | OPI3 | YJR073C | Methylene-fatty-acyl-phospholipid synthase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MNN9 | YPL050C | Subunit of Golgi mannosyltransferase complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TCD1 | YHR003C | tRNA threonylcarbamoyladenosine dehydratase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MTC1 | YJL123C | Protein of unknown function that may interact with ribosomes | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | KEL1 | YHR158C | Protein required for proper cell fusion and cell morphology | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RCO1 | YMR075W | Essential component of the Rpd3S histone deacetylase complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YBR238C | YBR238C | Mitochondrial membrane protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SMI1 | YGR229C | Protein involved in the regulation of cell wall synthesis | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SAC7 | YDR389W | GTPase activating protein (GAP) for Rho1p | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PCT1 | YGR202C | Cholinephosphate cytidylyltransferase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YFR018C | YFR018C | Putative protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TLG2 | YOL018C | Syntaxin-like t-SNARE | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SYS1 | YJL004C | Integral membrane protein of the Golgi | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SEY1 | YOR165W | Dynamin-like GTPase that mediates homotypic ER fusion | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | RPA14 | YDR156W | RNA polymerase I subunit A14 | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | KIN3 | YAR018C | Nonessential serine/threonine protein kinase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | KRE1 | YNL322C | Cell wall glycoprotein involved in beta-glucan assembly | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YHR078W | YHR078W | High osmolarity-regulated gene of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | NEM1 | YHR004C | Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | UTH1 | YKR042W | Mitochondrial inner membrane protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YUR1 | YJL139C | Mannosyltransferase involved in protein N-glycosylation | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | LAS21 | YJL062W | Mannose-ethanolamine phosphotransferase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | STE24 | YJR117W | Highly conserved zinc metalloprotease | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | TTI1 | YKL033W | Subunit of the ASTRA complex, involved in chromatin remodeling | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PBR1 | YNL181W | Putative oxidoreductase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | PEX19 | YDL065C | Chaperone and import receptor for newly-synthesized class I PMPs | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SCS7 | YMR272C | Sphingolipid alpha-hydroxylase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | YDJ1 | YNL064C | Type I HSP40 co-chaperone | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | SPT21 | YMR179W | Protein with a role in transcriptional silencing | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | NST1 | YNL091W | Translational inhibitor and suppressor of proteasome-assembly defects | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | MTW1 | YAL034W-A | Essential component of the MIND kinetochore complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RER2 | YBR002C | Forms the dehydrodolichyl diphosphate synthase (DDS) complex with NUS1 | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PDI1 | YCL043C | Protein disulfide isomerase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SNU56 | YDR240C | Component of U1 snRNP required for mRNA splicing via spliceosome | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TRS23 | YDR246W | Core component of transport protein particle (TRAPP) complexes I-III | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RBA50 | YDR527W | Protein involved in transcription | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PRP22 | YER013W | DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MOB2 | YFL034C-B | Activator of Cbk1p kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | KEG1 | YFR042W | Integral membrane protein of the ER | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPF1 | YHR088W | Protein involved in assembly and export of the large ribosomal subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NEO1 | YIL048W | Phospholipid translocase (flippase) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PAN1 | YIR006C | Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | POP7 | YBR167C | Subunit of RNase MRP, nuclear RNase P and telomerase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | OST2 | YOR103C | Epsilon subunit of the oligosaccharyltransferase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SNU114 | YKL173W | GTPase component of U5 snRNP involved in mRNA splicing via spliceosome | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PRP16 | YKR086W | DEAH-box RNA helicase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SSL1 | YLR005W | Subunit of the core form of RNA polymerase transcription factor TFIIH | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SMC4 | YLR086W | Subunit of the condensin complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TUB4 | YLR212C | Gamma-tubulin | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SMD2 | YLR275W | Core Sm protein Sm D2 | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YHC1 | YLR298C | Component of the U1 snRNP complex required for pre-mRNA splicing | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NSE5 | YML023C | Component of the SMC5-SMC6 complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | UTP15 | YMR093W | Nucleolar protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SWP1 | YMR149W | Delta subunit of the oligosaccharyl transferase glycoprotein complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NAF1 | YNL124W | RNA-binding protein required for the assembly of box H/ACA snoRNPs | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NAR1 | YNL240C | Subunit of the cytosolic iron-sulfur (FeS) protein assembly machinery | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SMP3 | YOR149C | Alpha 1,2-mannosyltransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | LAS17 | YOR181W | Actin assembly factor | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TFB2 | YPL122C | Subunit of TFIIH and nucleotide excision repair factor 3 complexes | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPL33A | YPL143W | Ribosomal 60S subunit protein L33A | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PRP4 | YPR178W | Splicing factor | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SMX3 | YPR182W | Core Sm protein Sm F | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YSY6 | YBR162W-A | Protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | OCA4 | YCR095C | Cytoplasmic protein required for replication of Brome mosaic virus | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NHP10 | YDL002C | Non-essential INO80 chromatin remodeling complex subunit | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | OST4 | YDL232W | Subunit of the oligosaccharyltransferase complex of the ER lumen | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | OCA6 | YDR067C | Cytoplasmic protein required for replication of Brome mosaic virus | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SNF1 | YDR477W | AMP-activated S/T protein kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SCS3 | YGL126W | Protein required for normal ER membrane biosynthesis in response to ER | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MRM2 | YGL136C | Mitochondrial 2' O-ribose methyltransferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SAY1 | YGR263C | Sterol deacetylase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MBR1 | YKL093W | Protein involved in mitochondrial functions and stress response | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SIW14 | YNL032W | Inositol phosphatase involved in inositol pyrophosphate metabolism | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | OCA1 | YNL099C | Putative protein tyrosine phosphatase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SNC2 | YOR327C | Vesicle membrane receptor protein (v-SNARE) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RLM1 | YPL089C | MADS-box transcription factor | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SRO7 | YPR032W | Effector of Rab GTPase Sec4p | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SYT1 | YPR095C | Guanine nucleotide exchange factor (GEF) for Arf proteins | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PIN4 | YBL051C | Protein involved in G2/M phase progression and response to DNA damage | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NUP170 | YBL079W | Subunit of inner ring of nuclear pore complex (NPC) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YBL086C | YBL086C | Protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VMA9 | YCL005W-A | Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MAK32 | YCR019W | Protein necessary for stability of L-A dsRNA-containing particles | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SAC6 | YDR129C | Fimbrin, actin-bundling protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | KGD2 | YDR148C | Dihydrolipoyl transsuccinylase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SWA2 | YDR320C | Auxilin-like protein involved in vesicular transport | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YPQ2 | YDR352W | Putative vacuolar membrane transporter for cationic amino acids | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YDR524C-B | YDR524C-B | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YDR524W-C | YDR524W-C | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VAC8 | YEL013W | Vacuole-specific Myo2p receptor | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RIP1 | YEL024W | Ubiquinol-cytochrome-c reductase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VMA3 | YEL027W | Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | VMA8 | YEL051W | Subunit D of the V1 peripheral membrane domain of V-ATPase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NPR2 | YEL062W | Subunit of the Iml1p/SEACIT complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | UBP3 | YER151C | Ubiquitin-specific protease that cleaves Ub-protein fusions | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YFL065C | YFL065C | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SNF4 | YGL115W | Activating gamma subunit of the AMP-activated Snf1p kinase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YGR204C-A | YGR204C-A | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PTH1 | YHR189W | One of two mitochondrially-localized peptidyl-tRNA hydrolases | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PPX1 | YHR201C | Exopolyphosphatase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SCH9 | YHR205W | AGC family protein kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MET18 | YIL128W | Component of cytosolic iron-sulfur protein assembly (CIA) machinery | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PBS2 | YJL128C | MAP kinase kinase of the HOG signaling pathway | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MRT4 | YKL009W | Protein involved in mRNA turnover and ribosome assembly | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MUD2 | YKL074C | Protein involved in early pre-mRNA splicing | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SDH2 | YLL041C | Iron-sulfur protein subunit of succinate dehydrogenase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PER33 | YLR064W | Protein that localizes to the endoplasmic reticulum | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | TDA5 | YLR426W | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RPL6A | YML073C | Ribosomal 60S subunit protein L6A | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | NAB6 | YML117W | Putative RNA-binding protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MAC1 | YMR021C | Copper-sensing transcription factor | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | KEX2 | YNL238W | Kexin, a subtilisin-like protease (proprotein convertase) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | SLA2 | YNL243W | Adaptor protein that links actin to clathrin and endocytosis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MON2 | YNL297C | Protein with a role in endocytosis and vacuole integrity | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YPT11 | YNL304W | Rab GTPase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MCK1 | YNL307C | Dual-specificity ser/thr and tyrosine protein kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PRS5 | YOL061W | 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | MOD5 | YOR274W | Delta 2-isopentenyl pyrophosphate:tRNA isopentenyl transferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YOR296W | YOR296W | Putative protein of unknown function | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | PYK2 | YOR347C | Pyruvate kinase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | YPL060C-A | YPL060C-A | TyA Gag protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | RAD5 | YLR032W | DNA helicase/Ubiquitin ligase | genetic | 1 | 1 | 1 | Dosage Lethality | 
            
                | EMP47 | YFL048C | Integral membrane component of ER-derived COPII-coated vesicles | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ERV46 | YAL042W | Protein localized to COPII-coated vesicles | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CSG2 | YBR036C | Endoplasmic reticulum membrane protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | EMC1 | YCL045C | Member of conserved endoplasmic reticulum membrane complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | BNR1 | YIL159W | Formin | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | EMC5 | YIL027C | Member of conserved ER transmembrane complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | INP53 | YOR109W | Polyphosphatidylinositol phosphatase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | EMA17 | YIL029C | Protein involved in targeting mitochondrial membrane protein precursor | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ENT2 | YLR206W | Epsin-like protein required for endocytosis and actin patch assembly | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | CHS5 | YLR330W | Component of the exomer complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HHT2 | YNL031C | Histone H3 | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HRD1 | YOL013C | Ubiquitin-protein ligase involved in ER-associated degradation (ERAD) | physical | 1 | 1 | 1 | Affinity Capture-Western | 
            
                | HRD1 | YOL013C | Ubiquitin-protein ligase involved in ER-associated degradation (ERAD) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ERV29 | YGR284C | Protein localized to COPII-coated vesicles | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HSV2 | YGR223C | Phosphatidylinositol 3,5-bisphosphate-binding protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | DID2 | YKR035W-A | Class E protein of the vacuolar protein-sorting (Vps) pathway | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | DOM34 | YNL001W | Protein that facilitates ribosomal subunit dissociation | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ERV14 | YGL054C | COPII-coated vesicle protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | IXR1 | YKL032C | Transcriptional repressor that regulates hypoxic genes during normoxia | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | EMC6 | YLL014W | Member of conserved ER transmembrane complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | COY1 | YKL179C | Golgi membrane protein with similarity to mammalian CASP | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | BUG1 | YDL099W | Cis-golgi localized protein involved in ER to Golgi transport | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HMG1 | YML075C | HMG-CoA reductase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | BTS1 | YPL069C | Geranylgeranyl diphosphate synthase (GGPPS) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CSF1 | YLR087C | Protein with structural similarity to lipid transport protein Vps13p | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | DUS3 | YLR401C | Dihydrouridine synthase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GTB1 | YDR221W | Glucosidase II beta subunit, forms a complex with alpha subunit Rot2p | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ERG2 | YMR202W | C-8 sterol isomerase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GDA1 | YEL042W | Guanosine diphosphatase located in the Golgi | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HAM1 | YJR069C | Nucleoside triphosphate pyrophosphohydrolase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GPI2 | YPL076W | Protein involved in the synthesis of GlcNAc-PI | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CUE1 | YMR264W | Ubiquitin-binding protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | FAT1 | YBR041W | Very long chain fatty acyl-CoA synthetase and fatty acid transporter | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HRQ1 | YDR291W | 3'-5' DNA helicase of the conserved RecQ family | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ADE16 | YLR028C | Enzyme of 'de novo' purine biosynthesis | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ELF1 | YKL160W | Transcription elongation factor with a conserved zinc finger domain | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | COA4 | YLR218C | Twin Cx(9)C protein involved in cytochrome c oxidase organization | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GCV3 | YAL044C | H subunit of the mitochondrial glycine decarboxylase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | CAJ1 | YER048C | Nuclear type II J heat shock protein of the E. coli dnaJ family | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | FRD1 | YEL047C | Soluble fumarate reductase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GIS2 | YNL255C | Translational activator for mRNAs with internal ribosome entry sites | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | AHC2 | YCR082W | Component of the ADA histone acetyltransferase complex | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | AHC2 | YCR082W | Component of the ADA histone acetyltransferase complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GPI17 | YDR434W | Transmembrane protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ISR1 | YPR106W | Predicted protein kinase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GCS1 | YDL226C | ADP-ribosylation factor GTPase activating protein (ARF GAP) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | BST1 | YFL025C | GPI inositol deacylase of the endoplasmic reticulum (ER) | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | FYV6 | YNL133C | Protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ARV1 | YLR242C | Cortical ER protein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | DFM1 | YDR411C | Endoplasmic reticulum (ER) localized protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | AGE2 | YIL044C | ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HUT1 | YPL244C | Protein with a role in UDP-galactose transport to the Golgi lumen | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GPI12 | YMR281W | ER membrane protein involved in the second step of GPI anchor assembly | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | EUG1 | YDR518W | Protein disulfide isomerase of the endoplasmic reticulum lumen | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | EMC4 | YGL231C | Member of conserved ER transmembrane complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | HUR1 | YGL168W | Protein with a role in DNA repair | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CWH43 | YCR017C | GPI lipid remodelase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GPI19 | YDR437W | Subunit of GPI-GlcNAc transferase involved in synthesis of GlcNAc-PI | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | COQ2 | YNR041C | Para hydroxybenzoate polyprenyl transferase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GOT1 | YMR292W | Homodimeric protein that is packaged into COPII vesicles | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ITR1 | YDR497C | Myo-inositol transporter | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | COS7 | YDL248W | Endosomal protein involved in turnover of plasma membrane proteins | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | COX7 | YMR256C | Subunit VII of cytochrome c oxidase (Complex IV) | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HLJ1 | YMR161W | Co-chaperone for Hsp40p | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ALG12 | YNR030W | Alpha-1,6-mannosyltransferase localized to the ER | physical | 1 | 1 | 1 | PCA | 
            
                | CCW12 | YLR110C | Cell wall mannoprotein | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | FRT1 | YOR324C | Tail-anchored ER membrane protein of unknown function | physical | 1 | 1 | 1 | Two-hybrid | 
            
                | ISC1 | YER019W | Inositol phosphosphingolipid phospholipase C | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ALG9 | YNL219C | Mannosyltransferase, involved in N-linked glycosylation | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | DFG10 | YIL049W | Probable polyprenol reductase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GPI18 | YBR004C | Functional ortholog of human PIG-V | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | COX12 | YLR038C | Subunit VIb of cytochrome c oxidase | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | COX20 | YDR231C | Mitochondrial inner membrane protein | physical | 1 | 1 | 1 | Affinity Capture-MS | 
            
                | COX20 | YDR231C | Mitochondrial inner membrane protein | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | EMC10 | YDR056C | Putative protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | FRE4 | YNR060W | Ferric reductase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GSH2 | YOL049W | Glutathione synthetase | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | EMC3 | YKL207W | Member of conserved ER transmembrane complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ATG22 | YCL038C | Vacuolar integral membrane protein required for efflux of amino acids | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | GPI8 | YDR331W | Catalytic subunit of the ER membrane GPI transamidase complex | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | ERD2 | YBL040C | HDEL receptor | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | HXT8 | YJL214W | Protein of unknown function with similarity to hexose transporters | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | EMC2 | YJR088C | Member of conserved ER transmembrane complex | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | CSS3 | YOL159C | Protein of unknown function, secreted when constitutively expressed | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GYP8 | YFL027C | GTPase-activating protein for yeast Rab family members | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | GPI11 | YDR302W | ER membrane protein involved in a late step of GPI anchor assembly | genetic | 1 | 1 | 1 | Negative Genetic | 
            
                | IRC21 | YMR073C | Protein of unknown function | genetic | 1 | 1 | 1 | Positive Genetic | 
            
                | ASP3-3 | YLR158C | Cell-wall L-asparaginase II involved in asparagine catabolism | genetic | 1 | 1 | 1 | Negative Genetic |