Standard name Systematic name Name description Description
PUF2 YPR042C PUF family mRNA-binding protein PUF family mRNA-binding protein; Pumilio homology domain confers RNA binding activity; preferentially binds mRNAs encoding membrane-associated proteins; binding site composed of two UAAU tetranucleotides, separated by a 3-nt linker; PUF2 has a paralog, JSN1, that arose from the whole genome duplication
Visualize the interactome of PUF2
Links to external databases:
  SGD   |   KEGG   |  

Cell cycle phase and timing of transcription peak

Cell cycle phase Time (min)

CYCLoPs localization & abundance

WT1 WT2 WT3
Cell Periphery 0.056 NaN NaN
Cytoplasm 0.968 0.957 0.974

GFP localization & abundance

GFP localization GFP abundance
cytoplasm 377

GO term count

Metabolism Cell cycle Cell division Signal transduction DNA replication
PUF2 1 0 0 0 0

List of interactors

Use the search utility to find the interactor you are looking for. By clicking the column headers the table will be sorted on that column. Use shift+click to sort on multiple columns. Default sorting is on number of experiments, number of unique methods and the number of publications, and alphabetical on standard name, in that order.
Standard name Systematic name Name description Type #Experiments #Methods #Publications Evidence
PMP2 YEL017C-A Proteolipid associated with plasma membrane H(+)-ATPase (Pma1p) physical 4 3 2 Protein-RNA, Affinity Capture-RNA, Two-hybrid, Affinity Capture-RNA
DHH1 YDL160C Cytoplasmic DEAD-box helicase and mRNA decapping activator physical 3 1 3 Affinity Capture-RNA, Affinity Capture-RNA, Affinity Capture-RNA
SHO1 YER118C Transmembrane osmosensor for filamentous growth and HOG pathways physical 3 3 1 Affinity Capture-Western, Two-hybrid, PCA
MUD1 YBR119W U1 snRNP A protein physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
CAF40 YNL288W Component of the CCR4-NOT transcriptional complex physical 2 2 2 PCA, Affinity Capture-RNA
CRM1 YGR218W Nuclear export factor, exportin physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
NAM8 YHR086W RNA binding protein, component of the U1 snRNP protein physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
HHT1 YBR010W Histone H3 physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
GIM4 YEL003W Subunit of the heterohexameric cochaperone prefoldin complex genetic 2 2 2 Phenotypic Suppression, Positive Genetic
HHT2 YNL031C Histone H3 physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
SKY1 YMR216C SR protein kinase (SRPK) physical 2 2 2 Biochemical Activity, Affinity Capture-RNA
PUF2 YPR042C PUF family mRNA-binding protein physical 2 2 2 Reconstituted Complex, Affinity Capture-RNA
CCR4 YAL021C Component of the CCR4-NOT transcriptional complex physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
CDC3 YLR314C Component of the septin ring that is required for cytokinesis genetic 2 1 2 Negative Genetic, Negative Genetic
RPD3 YNL330C Histone deacetylase, component of both the Rpd3S and Rpd3L complexes genetic 2 1 2 Negative Genetic, Negative Genetic
BIM1 YER016W Microtubule plus end-tracking protein genetic 2 1 1 Phenotypic Enhancement, Phenotypic Enhancement
FKH2 YNL068C Forkhead family transcription factor regulation 1 1 1 chromatin immunoprecipitation-chip evidence
RGR1 YLR071C Subunit of the RNA polymerase II mediator complex regulation 1 1 1 chromatin immunoprecipitation-chip evidence
XBP1 YIL101C Transcriptional repressor regulation 1 1 1 chromatin immunoprecipitation-chip evidence
RAP1 YNL216W Essential DNA-binding transcription regulator that binds many loci regulation 1 1 1 chromatin immunoprecipitation-chip evidence
REB1 YBR049C RNA polymerase I enhancer binding protein regulation 1 1 1 chromatin immunoprecipitation-chip evidence
YAP5 YIR018W Basic leucine zipper (bZIP) iron-sensing transcription factor regulation 1 1 1 DNA to cDNA expression microarray evidence
CHD1 YER164W Chromatin remodeler that regulates various aspects of transcription physical 1 1 1 Affinity Capture-RNA
CTF19 YPL018W Outer kinetochore protein, needed for accurate chromosome segregation physical 1 1 1 Affinity Capture-RNA
HSP60 YLR259C Tetradecameric mitochondrial chaperonin physical 1 1 1 Affinity Capture-RNA
ERB1 YMR049C Constituent of 66S pre-ribosomal particles physical 1 1 1 Affinity Capture-RNA
HAS1 YMR290C ATP-dependent RNA helicase physical 1 1 1 Affinity Capture-RNA
NIP7 YPL211W Nucleolar protein required for 60S ribosome subunit biogenesis physical 1 1 1 Affinity Capture-RNA
NOG1 YPL093W Putative GTPase physical 1 1 1 Affinity Capture-RNA
NOP2 YNL061W rRNA m5C methyltransferase physical 1 1 1 Affinity Capture-RNA
KAP123 YER110C Karyopherin beta physical 1 1 1 Affinity Capture-RNA
MIA40 YKL195W Import and assembly protein in mitochondrial intermembrane space physical 1 1 1 Affinity Capture-RNA
NUC1 YJL208C Major mitochondrial nuclease physical 1 1 1 Affinity Capture-RNA
AMN1 YBR158W Modulator of cell separation and mitotic exit physical 1 1 1 Affinity Capture-RNA
AXL2 YIL140W Integral plasma membrane protein physical 1 1 1 Affinity Capture-RNA
PFK27 YOL136C 6-phosphofructo-2-kinase physical 1 1 1 Affinity Capture-RNA
PRP43 YGL120C RNA helicase in the DEAH-box family genetic 1 1 1 Negative Genetic
NTR2 YKR022C Essential protein that forms a dimer with Ntr1p genetic 1 1 1 Positive Genetic
BRE1 YDL074C E3 ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
NOP15 YNL110C Constituent of 66S pre-ribosomal particles physical 1 1 1 Affinity Capture-RNA
CIC1 YHR052W Essential protein that interacts with proteasome components physical 1 1 1 Affinity Capture-RNA
MES1 YGR264C Methionyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
DBP3 YGL078C RNA-Dependent ATPase, member of DExD/H-box family physical 1 1 1 Affinity Capture-RNA
NSR1 YGR159C Nucleolin, nucleolar protein that binds nuclear localization sequences physical 1 1 1 Affinity Capture-RNA
GAR1 YHR089C Protein component of the H/ACA snoRNP pseudouridylase complex physical 1 1 1 Affinity Capture-RNA
NHP2 YDL208W Protein related to mammalian high mobility group (HMG) proteins physical 1 1 1 Affinity Capture-RNA
MAK21 YDR060W Constituent of 66S pre-ribosomal particles physical 1 1 1 Affinity Capture-RNA
NAT3 YPR131C Catalytic subunit of the NatB N-terminal acetyltransferase physical 1 1 1 Affinity Capture-RNA
LSM1 YJL124C Lsm (Like Sm) protein physical 1 1 1 Affinity Capture-RNA
PAT1 YCR077C Deadenylation-dependent mRNA-decapping factor physical 1 1 1 Affinity Capture-RNA
PRP3 YDR473C Splicing factor physical 1 1 1 Affinity Capture-RNA
NOP1 YDL014W Histone glutamine methyltransferase, modifies H2A at Q105 in nucleolus physical 1 1 1 Affinity Capture-RNA
DED1 YOR204W ATP-dependent DEAD-box RNA helicase with strand-annealing activity physical 1 1 1 Affinity Capture-RNA
PAB1 YER165W Poly(A) binding protein physical 1 1 1 Affinity Capture-RNA
NPL3 YDR432W RNA-binding protein genetic 1 1 1 Synthetic Rescue
CBC2 YPL178W Small subunit of the heterodimeric cap binding complex with Sto1p physical 1 1 1 Affinity Capture-MS
CBC2 YPL178W Small subunit of the heterodimeric cap binding complex with Sto1p genetic 1 1 1 Negative Genetic
GCD11 YER025W Gamma subunit of the translation initiation factor eIF2 physical 1 1 1 Affinity Capture-RNA
HCR1 YLR192C eIF3j component of translation initiation factor 3 (eIF3) physical 1 1 1 Affinity Capture-RNA
NIP1 YMR309C eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3) physical 1 1 1 Affinity Capture-RNA
GCD1 YOR260W Gamma subunit of the translation initiation factor eIF2B physical 1 1 1 Affinity Capture-RNA
KAP95 YLR347C Karyopherin beta physical 1 1 1 Affinity Capture-RNA
CFT2 YLR115W Subunit of the mRNA cleavage and polyadenlylation factor (CPF) physical 1 1 1 Affinity Capture-RNA
PRE10 YOR362C Alpha 7 subunit of the 20S proteasome physical 1 1 1 Affinity Capture-RNA
ALA1 YOR335C Cytoplasmic and mitochondrial alanyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
NAB2 YGL122C Nuclear polyadenylated RNA-binding protein physical 1 1 1 Affinity Capture-RNA
NAM7 YMR080C ATP-dependent RNA helicase of the SFI superfamily physical 1 1 1 Affinity Capture-RNA
AOS1 YPR180W Subunit of heterodimeric nuclear SUMO activating enzyme E1 with Uba2p physical 1 1 1 Affinity Capture-RNA
ARC18 YLR370C Subunit of the ARP2/3 complex physical 1 1 1 Affinity Capture-RNA
ARC19 YKL013C Subunit of the ARP2/3 complex physical 1 1 1 Affinity Capture-RNA
BAT1 YHR208W Mitochondrial branched-chain amino acid (BCAA) aminotransferase physical 1 1 1 Affinity Capture-RNA
BDF1 YLR399C BET family transcriptional regulator physical 1 1 1 Affinity Capture-RNA
BEM1 YBR200W Protein containing SH3-domains physical 1 1 1 Affinity Capture-RNA
ASC1 YMR116C G-protein beta subunit and guanine dissociation inhibitor for Gpa2p physical 1 1 1 Affinity Capture-RNA
AIM21 YIR003W Subunit of a complex that associates with actin filaments physical 1 1 1 Affinity Capture-RNA
CDC14 YFR028C Protein phosphatase required for mitotic exit physical 1 1 1 Affinity Capture-MS
CDC12 YHR107C Component of the septin ring that is required for cytokinesis physical 1 1 1 Affinity Capture-RNA
ATP11 YNL315C Molecular chaperone physical 1 1 1 Affinity Capture-RNA
ERG26 YGL001C C-3 sterol dehydrogenase physical 1 1 1 Affinity Capture-RNA
NSA2 YER126C Protein constituent of 66S pre-ribosomal particles physical 1 1 1 Affinity Capture-RNA
NOG2 YNR053C Putative GTPase physical 1 1 1 Affinity Capture-RNA
CHC1 YGL206C Clathrin heavy chain physical 1 1 1 Affinity Capture-RNA
COX5A YNL052W Subunit Va of cytochrome c oxidase physical 1 1 1 Affinity Capture-RNA
COX6 YHR051W Subunit VI of cytochrome c oxidase (Complex IV) physical 1 1 1 Affinity Capture-RNA
FPR1 YNL135C Peptidyl-prolyl cis-trans isomerase (PPIase) physical 1 1 1 Affinity Capture-RNA
FET5 YFL041W Multicopper oxidase physical 1 1 1 Affinity Capture-RNA
FKS1 YLR342W Catalytic subunit of 1,3-beta-D-glucan synthase physical 1 1 1 Affinity Capture-RNA
GGA2 YHR108W Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking physical 1 1 1 Affinity Capture-RNA
GTR2 YGR163W Subunit of a TORC1-stimulating GTPase and the EGO/GSE complex physical 1 1 1 Affinity Capture-RNA
GLY1 YEL046C Threonine aldolase physical 1 1 1 Affinity Capture-RNA
HHF1 YBR009C Histone H4 physical 1 1 1 Affinity Capture-RNA
HHF2 YNL030W Histone H4 physical 1 1 1 Affinity Capture-RNA
HTB2 YBL002W Histone H2B physical 1 1 1 Affinity Capture-RNA
ACK1 YDL203C Protein that functions in the cell wall integrity pathway physical 1 1 1 Affinity Capture-RNA
IRR1 YIL026C Subunit of the cohesin complex physical 1 1 1 Affinity Capture-RNA
ISW1 YBR245C ATPase subunit of imitation-switch (ISWI) class chromatin remodelers physical 1 1 1 Affinity Capture-RNA
CLU1 YMR012W Subunit of the eukaryotic translation initiation factor 3 (eIF3) physical 1 1 1 Affinity Capture-RNA
KGD1 YIL125W Subunit of the mitochondrial alpha-ketoglutarate dehydrogenase complex physical 1 1 1 Affinity Capture-RNA
ARB1 YER036C ATPase of the ATP-binding cassette (ABC) family physical 1 1 1 Affinity Capture-RNA
HSL1 YKL101W Nim1p-related protein kinase physical 1 1 1 Affinity Capture-RNA
GFA1 YKL104C Glutamine-fructose-6-phosphate amidotransferase physical 1 1 1 Affinity Capture-RNA
ENO2 YHR174W Enolase II, a phosphopyruvate hydratase physical 1 1 1 Affinity Capture-RNA
KEL1 YHR158C Protein required for proper cell fusion and cell morphology physical 1 1 1 Affinity Capture-RNA
LYS2 YBR115C Alpha aminoadipate reductase physical 1 1 1 Affinity Capture-RNA
MAS1 YLR163C Beta subunit of the mitochondrial processing protease (MPP) physical 1 1 1 Affinity Capture-RNA
MBP1 YDL056W Transcription factor physical 1 1 1 Affinity Capture-RNA
MCM6 YGL201C Protein involved in DNA replication physical 1 1 1 Affinity Capture-RNA
GAL11 YOL051W Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
MOT1 YPL082C Essential protein involved in regulation of transcription physical 1 1 1 Affinity Capture-RNA
MRP1 YDR347W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
MRP13 YGR084C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
MRP4 YHL004W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
HRR25 YPL204W Conserved casein kinase, monopolin subunit physical 1 1 1 Affinity Capture-RNA
IMG1 YCR046C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRPL10 YNL284C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRM1 YOR201C Ribose methyltransferase physical 1 1 1 Affinity Capture-RNA
MRPL1 YDR116C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRPL16 YBL038W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
ATG26 YLR189C UDP-glucose:sterol glucosyltransferase physical 1 1 1 Affinity Capture-RNA
MRP20 YDR405W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRPL19 YNL185C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRPL13 YKR006C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRPL20 YKR085C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRPL24 YMR193W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRPL28 YDR462W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRPL35 YDR322W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRPL36 YBR122C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRPL39 YML009C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRPL4 YLR439W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRPL7 YDR237W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRPL8 YJL063C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRPL9 YGR220C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRH4 YGL064C Mitochondrial ATP-dependent RNA helicase of the DEAD-box family physical 1 1 1 Affinity Capture-RNA
FYV4 YHR059W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRP10 YDL045W-A Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
MRP17 YKL003C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
MRP51 YPL118W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
MRPS28 YDR337W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
MGM101 YJR144W Protein with a role in mitochondrial DNA recombinational repair physical 1 1 1 Affinity Capture-RNA
CMR1 YDL156W Nuclear protein with role in transcription, protein quality control physical 1 1 1 Affinity Capture-MS
MAM33 YIL070C Acidic protein of the mitochondrial matrix physical 1 1 1 Affinity Capture-RNA
GIN4 YDR507C Protein kinase involved in bud growth and assembly of the septin ring physical 1 1 1 Affinity Capture-RNA
MIS1 YBR084W Mitochondrial C1-tetrahydrofolate synthase genetic 1 1 1 Negative Genetic
NCL1 YBL024W S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase physical 1 1 1 Affinity Capture-RNA
NOT3 YIL038C Component of the CCR4-NOT core complex, involved in mRNA decapping physical 1 1 1 Affinity Capture-RNA
MRPL3 YMR024W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
NSP1 YJL041W FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
NUP116 YMR047C FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
NUP60 YAR002W FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
ORC2 YBR060C Subunit of the origin recognition complex (ORC) physical 1 1 1 Affinity Capture-RNA
LPD1 YFL018C Dihydrolipoamide dehydrogenase genetic 1 1 1 Negative Genetic
PDA1 YER178W E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex physical 1 1 1 Affinity Capture-RNA
PDB1 YBR221C E1 beta subunit of the pyruvate dehydrogenase (PDH) complex physical 1 1 1 Affinity Capture-RNA
DIG1 YPL049C MAP kinase-responsive inhibitor of the Ste12p transcription factor physical 1 1 1 Affinity Capture-RNA
AAP1 YHR047C Arginine/alanine amino peptidase physical 1 1 1 Affinity Capture-RNA
PFK1 YGR240C Alpha subunit of heterooctameric phosphofructokinase physical 1 1 1 Affinity Capture-RNA
PGK1 YCR012W 3-phosphoglycerate kinase physical 1 1 1 Affinity Capture-RNA
IDH2 YOR136W Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase physical 1 1 1 Affinity Capture-RNA
POP2 YNR052C Subunit of Ccr4-Not complex that mediates 3' to 5' mRNA deadenylation physical 1 1 1 Affinity Capture-RNA
PPH22 YDL188C Catalytic subunit of protein phosphatase 2A, PP2A physical 1 1 1 Affinity Capture-RNA
PPH3 YDR075W Catalytic subunit of protein phosphatase PP4 complex physical 1 1 1 Affinity Capture-RNA
PRE4 YFR050C Beta 7 subunit of the 20S proteasome physical 1 1 1 Affinity Capture-RNA
GLE2 YER107C RNA export factor associated with the nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
HTA1 YDR225W Histone H2A physical 1 1 1 Affinity Capture-RNA
MDS3 YGL197W Putative component of the TOR regulatory pathway physical 1 1 1 Affinity Capture-RNA
PSE1 YMR308C Karyopherin/importin that interacts with the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
PTC3 YBL056W Type 2C protein phosphatase (PP2C) physical 1 1 1 Affinity Capture-RNA
NAB3 YPL190C RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p) physical 1 1 1 Affinity Capture-RNA
NRD1 YNL251C RNA-binding subunit of Nrd1 complex physical 1 1 1 Affinity Capture-RNA
NRP1 YDL167C Putative RNA binding protein of unknown function physical 1 1 1 Affinity Capture-RNA
PUB1 YNL016W Poly (A)+ RNA-binding protein physical 1 1 1 Affinity Capture-RNA
HTA2 YBL003C Histone H2A physical 1 1 1 Affinity Capture-RNA
MVD1 YNR043W Mevalonate pyrophosphate decarboxylase physical 1 1 1 Affinity Capture-RNA
NOP14 YDL148C Nucleolar protein physical 1 1 1 Affinity Capture-RNA
MIR1 YJR077C Mitochondrial phosphate carrier physical 1 1 1 Affinity Capture-RNA
MET18 YIL128W Component of cytosolic iron-sulfur protein assembly (CIA) machinery physical 1 1 1 Affinity Capture-RNA
CPA2 YJR109C Large subunit of carbamoyl phosphate synthetase physical 1 1 1 Affinity Capture-RNA
GPT2 YKR067W Glycerol-3-phosphate/dihydroxyacetone phosphate sn-1 acyltransferase physical 1 1 1 Affinity Capture-RNA
ADE3 YGR204W Cytoplasmic trifunctional enzyme physical 1 1 1 Affinity Capture-RNA
DBP2 YNL112W ATP-dependent RNA helicase of the DEAD-box protein family genetic 1 1 1 Positive Genetic
OPI1 YHL020C Transcriptional regulator of a variety of genes physical 1 1 1 Affinity Capture-RNA
PIL1 YGR086C Eisosome core component physical 1 1 1 Affinity Capture-RNA
PHO12 YHR215W One of three repressible acid phosphatases physical 1 1 1 Affinity Capture-RNA
AVT4 YNL101W Vacuolar transporter physical 1 1 1 Affinity Capture-RNA
HRK1 YOR267C Protein kinase physical 1 1 1 Affinity Capture-RNA
PRP42 YDR235W U1 snRNP protein involved in splicing physical 1 1 1 Affinity Capture-RNA
PFK2 YMR205C Beta subunit of heterooctameric phosphofructokinase physical 1 1 1 Affinity Capture-RNA
MRPL23 YOR150W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
PTC1 YDL006W Type 2C protein phosphatase (PP2C) physical 1 1 1 Affinity Capture-RNA
HEM13 YDR044W Coproporphyrinogen III oxidase physical 1 1 1 Affinity Capture-RNA
CCT6 YDR188W Subunit of the cytosolic chaperonin Cct ring complex physical 1 1 1 Affinity Capture-RNA
EFB1 YAL003W Translation elongation factor 1 beta physical 1 1 1 Affinity Capture-RNA
NEW1 YPL226W Translation termination and ribosome biogenesis factor physical 1 1 1 Affinity Capture-RNA
BCY1 YIL033C Regulatory subunit of the cyclic AMP-dependent protein kinase (PKA) physical 1 1 1 Affinity Capture-RNA
GLN1 YPR035W Glutamine synthetase (GS) physical 1 1 1 Affinity Capture-RNA
MKS1 YNL076W Pleiotropic negative transcriptional regulator physical 1 1 1 Affinity Capture-RNA
ACE2 YLR131C Transcription factor required for septum destruction after cytokinesis physical 1 1 1 Affinity Capture-RNA
ECM30 YLR436C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ALT2 YDR111C Catalytically inactive alanine transaminase physical 1 1 1 Affinity Capture-RNA
DRE2 YKR071C Component of the cytosolic Fe-S protein assembly (CIA) machinery physical 1 1 1 Affinity Capture-RNA
BRO1 YPL084W Cytoplasmic class E vacuolar protein sorting (VPS) factor physical 1 1 1 Affinity Capture-RNA
HEK2 YBL032W RNA binding protein involved in asymmetric localization of ASH1 mRNA physical 1 1 1 Affinity Capture-RNA
PIN4 YBL051C Protein involved in G2/M phase progression and response to DNA damage physical 1 1 1 Affinity Capture-RNA
BOI1 YBL085W Protein involved in polar growth, functionally redundant with Boi2p physical 1 1 1 Affinity Capture-RNA
PNO1 YOR145C Essential nucleolar protein required for pre-18S rRNA processing physical 1 1 1 Affinity Capture-RNA
GET3 YDL100C Guanine nucleotide exchange factor for Gpa1p physical 1 1 1 Affinity Capture-RNA
CYM1 YDR430C Lysine-specific metalloprotease of the pitrilysin family physical 1 1 1 Affinity Capture-RNA
AIM17 YHL021C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ATP2 YJR121W Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
CRZ1 YNL027W Transcription factor, activates transcription of stress response genes physical 1 1 1 Affinity Capture-RNA
GAS1 YMR307W Beta-1,3-glucanosyltransferase required for cell wall assembly physical 1 1 1 Affinity Capture-RNA
ACO1 YLR304C Aconitase physical 1 1 1 Affinity Capture-RNA
AKL1 YBR059C Ser/Thr protein kinase physical 1 1 1 Affinity Capture-RNA
LSP1 YPL004C Eisosome core component physical 1 1 1 Affinity Capture-RNA
PHO84 YML123C High-affinity inorganic phosphate (Pi) transporter physical 1 1 1 Affinity Capture-RNA
GND1 YHR183W 6-phosphogluconate dehydrogenase (decarboxylating) physical 1 1 1 Affinity Capture-RNA
ISA2 YPR067W Protein required for maturation of mitochondrial [4Fe-4S] proteins physical 1 1 1 Affinity Capture-RNA
PHO85 YPL031C Cyclin-dependent kinase physical 1 1 1 Biochemical Activity
CAF20 YOR276W Phosphoprotein of the mRNA cap-binding complex physical 1 1 1 Affinity Capture-RNA
CDC5 YMR001C Polo-like kinase required for mitotic exit physical 1 1 1 Affinity Capture-RNA
FOL2 YGR267C GTP-cyclohydrolase I, catalyzes first step in folic acid biosynthesis physical 1 1 1 Affinity Capture-RNA
GPP1 YIL053W Constitutively expressed DL-glycerol-3-phosphate phosphatase physical 1 1 1 Affinity Capture-RNA
PRB1 YEL060C Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity physical 1 1 1 Affinity Capture-RNA
AHP1 YLR109W Thiol-specific peroxiredoxin physical 1 1 1 Affinity Capture-RNA
FET3 YMR058W Ferro-O2-oxidoreductase physical 1 1 1 Affinity Capture-RNA
FAA4 YMR246W Long chain fatty acyl-CoA synthetase physical 1 1 1 Affinity Capture-RNA
HSH49 YOR319W U2-snRNP associated splicing factor physical 1 1 1 Affinity Capture-RNA
OYE2 YHR179W Conserved NADPH oxidoreductase containing flavin mononucleotide (FMN) physical 1 1 1 Affinity Capture-RNA
ILV5 YLR355C Acetohydroxyacid reductoisomerase and mtDNA binding protein physical 1 1 1 Affinity Capture-RNA
GID7 YCL039W Subunit of GID Complex that binds directly to central component Vid30p physical 1 1 1 Affinity Capture-RNA
PMA1 YGL008C Plasma membrane P2-type H+-ATPase physical 1 1 1 Affinity Capture-RNA
HXT6 YDR343C High-affinity glucose transporter physical 1 1 1 Affinity Capture-RNA
PMA2 YPL036W Plasma membrane H+-ATPase physical 1 1 1 Affinity Capture-RNA
PIB1 YDR313C RING-type ubiquitin ligase of the endosomal and vacuolar membranes physical 1 1 1 Affinity Capture-RNA
GET2 YER083C Subunit of the GET complex physical 1 1 1 Affinity Capture-RNA
ESL2 YKR096W hEST1A/B (SMG5/6)-like protein physical 1 1 1 Affinity Capture-RNA
BOL2 YGL220W Cytosolic protein involved in repression of iron regulon transcription physical 1 1 1 Affinity Capture-RNA
EGD1 YPL037C Subunit beta1 of the nascent polypeptide-associated complex (NAC) physical 1 1 1 Affinity Capture-RNA
CDC9 YDL164C DNA ligase I found in nucleus and mitochondria physical 1 1 1 Affinity Capture-RNA
ADK1 YDR226W Adenylate kinase, required for purine metabolism physical 1 1 1 Affinity Capture-RNA
PCL7 YIL050W Pho85p cyclin of the Pho80p subfamily physical 1 1 1 Affinity Capture-RNA
DIP5 YPL265W Dicarboxylic amino acid permease physical 1 1 1 Affinity Capture-RNA
HXT7 YDR342C High-affinity glucose transporter physical 1 1 1 Affinity Capture-RNA
GPD2 YOL059W NAD-dependent glycerol 3-phosphate dehydrogenase physical 1 1 1 Affinity Capture-RNA
FAR1 YJL157C CDK inhibitor and nuclear anchor physical 1 1 1 Affinity Capture-RNA
MAE1 YKL029C Mitochondrial malic enzyme physical 1 1 1 Affinity Capture-RNA
INM1 YHR046C Inositol monophosphatase physical 1 1 1 Affinity Capture-RNA
PSR1 YLL010C Plasma membrane-associated protein phosphatase physical 1 1 1 Affinity Capture-RNA
ILV3 YJR016C Dihydroxyacid dehydratase physical 1 1 1 Affinity Capture-RNA
LAF1 YMR102C Sterol-binding beta-propeller protein physical 1 1 1 Affinity Capture-RNA
KNS1 YLL019C Protein kinase involved in negative regulation of PolIII transcription physical 1 1 1 Affinity Capture-RNA
ERG1 YGR175C Squalene epoxidase physical 1 1 1 Affinity Capture-RNA
GPP2 YER062C DL-glycerol-3-phosphate phosphatase involved in glycerol biosynthesis physical 1 1 1 Affinity Capture-RNA
ADH3 YMR083W Mitochondrial alcohol dehydrogenase isozyme III physical 1 1 1 Affinity Capture-RNA
CAT5 YOR125C Protein required for ubiquinone (Coenzyme Q) biosynthesis physical 1 1 1 Affinity Capture-RNA
IMD4 YML056C Inosine monophosphate dehydrogenase physical 1 1 1 Affinity Capture-RNA
FHL1 YPR104C Regulator of ribosomal protein (RP) transcription physical 1 1 1 Affinity Capture-RNA
DSK2 YMR276W Nuclear-enriched ubiquitin-like polyubiquitin-binding protein physical 1 1 1 Affinity Capture-RNA
GRS1 YBR121C Cytoplasmic and mitochondrial glycyl-tRNA synthase physical 1 1 1 Affinity Capture-RNA
PTP3 YER075C Phosphotyrosine-specific protein phosphatase physical 1 1 1 Affinity Capture-RNA
LTP1 YPR073C Protein phosphotyrosine phosphatase of unknown cellular role physical 1 1 1 Affinity Capture-RNA
GPN3 YLR243W Putative GTPase with a role in biogenesis of RNA pol II and polIII physical 1 1 1 Affinity Capture-RNA
MET6 YER091C Cobalamin-independent methionine synthase physical 1 1 1 Affinity Capture-RNA
NTF2 YER009W Nuclear envelope protein physical 1 1 1 Affinity Capture-RNA
LRO1 YNR008W Acyltransferase that converts diacylglycerol to triacylglycerol (TGA) physical 1 1 1 Affinity Capture-RNA
MNP1 YGL068W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
AIM46 YHR199C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
INA1 YLR413W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
LAS1 YKR063C Endonuclease involved in pre-rRNA processing at both ends of ITS2 genetic 1 1 1 Negative Genetic
KIN2 YLR096W S/T protein kinase physical 1 1 1 Affinity Capture-RNA
CHS1 YNL192W Chitin synthase I physical 1 1 1 Affinity Capture-RNA
CBP6 YBR120C Mitochondrial protein required for translation of the COB mRNA physical 1 1 1 Affinity Capture-RNA
ISU1 YPL135W Conserved protein of the mitochondrial matrix physical 1 1 1 Affinity Capture-RNA
HHO1 YPL127C Histone H1, linker histone with roles in meiosis and sporulation physical 1 1 1 Affinity Capture-RNA
CDC123 YLR215C Assembly factor for the eIF2 translation initiation factor complex physical 1 1 1 Affinity Capture-RNA
MNN9 YPL050C Subunit of Golgi mannosyltransferase complex physical 1 1 1 Affinity Capture-RNA
NUS1 YDL193W Forms dehydrodolichyl diphosphate synthase complex with RER2 or SRT1 physical 1 1 1 Affinity Capture-RNA
ILV2 YMR108W Acetolactate synthase physical 1 1 1 Affinity Capture-RNA
FPK1 YNR047W Ser/Thr protein kinase physical 1 1 1 Affinity Capture-RNA
MSS116 YDR194C Mitochondrial transcription elongation factor physical 1 1 1 Affinity Capture-RNA
CIK1 YMR198W Kinesin-associated protein physical 1 1 1 Affinity Capture-RNA
ECM33 YBR078W GPI-anchored protein involved in efficient glucose uptake physical 1 1 1 Affinity Capture-RNA
PTP2 YOR208W Phosphotyrosine-specific phosphatase physical 1 1 1 Affinity Capture-RNA
PAC2 YER007W Microtubule effector required for tubulin heterodimer formation physical 1 1 1 Affinity Capture-RNA
CLB2 YPR119W B-type cyclin involved in cell cycle progression physical 1 1 1 Affinity Capture-RNA
PAP2 YOL115W Non-canonical poly(A) polymerase genetic 1 1 1 Negative Genetic
MDH2 YOL126C Cytoplasmic malate dehydrogenase physical 1 1 1 Affinity Capture-RNA
NUP1 YOR098C FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
LYS1 YIR034C Saccharopine dehydrogenase (NAD+, L-lysine-forming) physical 1 1 1 Affinity Capture-RNA
MCK1 YNL307C Dual-specificity ser/thr and tyrosine protein kinase physical 1 1 1 Affinity Capture-RNA
MFB1 YDR219C Mitochondria-associated F-box protein physical 1 1 1 Affinity Capture-RNA
PTC2 YER089C Type 2C protein phosphatase (PP2C) physical 1 1 1 Affinity Capture-RNA
MAS2 YHR024C Alpha subunit of the mitochondrial processing protease (MPP) physical 1 1 1 Affinity Capture-RNA
MCM4 YPR019W Essential helicase component of heterohexameric MCM2-7 complexes physical 1 1 1 Affinity Capture-RNA
CTR1 YPR124W High-affinity copper transporter of plasma membrane physical 1 1 1 Affinity Capture-RNA
EAP1 YKL204W eIF4E-associated protein, competes with eIF4G for binding to eIF4E physical 1 1 1 Affinity Capture-Western
DUT1 YBR252W Deoxyuridine triphosphate diphosphatase (dUTPase) physical 1 1 1 Affinity Capture-RNA
MIG1 YGL035C Transcription factor involved in glucose repression physical 1 1 1 Affinity Capture-RNA
BUB3 YOR026W Kinetochore checkpoint WD40 repeat protein physical 1 1 1 Affinity Capture-RNA
IST3 YIR005W Component of the U2 snRNP genetic 1 1 1 Negative Genetic
MSG5 YNL053W Dual-specificity protein phosphatase physical 1 1 1 Affinity Capture-RNA
MIC19 YFR011C Component of the MICOS complex physical 1 1 1 Affinity Capture-RNA
DUF1 YOL087C Ubiquitin-binding protein of unknown function physical 1 1 1 Affinity Capture-RNA
CBR1 YIL043C Cytochrome b reductase and NADH-dependent reductase for Dph3p physical 1 1 1 Affinity Capture-RNA
ALD5 YER073W Mitochondrial aldehyde dehydrogenase physical 1 1 1 Affinity Capture-RNA
ADE6 YGR061C Formylglycinamidine-ribonucleotide (FGAM)-synthetase physical 1 1 1 Affinity Capture-RNA
CYS3 YAL012W Cystathionine gamma-lyase physical 1 1 1 Affinity Capture-RNA
PHO86 YJL117W Endoplasmic reticulum (ER) resident protein physical 1 1 1 Affinity Capture-RNA
ERG11 YHR007C Lanosterol 14-alpha-demethylase physical 1 1 1 Affinity Capture-RNA
NUP133 YKR082W Subunit of Nup84p subcomplex of nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
EXG1 YLR300W Major exo-1,3-beta-glucanase of the cell wall physical 1 1 1 Affinity Capture-RNA
MMS22 YLR320W Subunit of E3 ubiquitin ligase complex involved in replication repair physical 1 1 1 Affinity Capture-MS
ATP5 YDR298C Subunit 5 of the stator stalk of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
NBP2 YDR162C Protein involved in the HOG (high osmolarity glycerol) pathway physical 1 1 1 Affinity Capture-RNA
DAD2 YKR083C Essential subunit of the Dam1 complex (aka DASH complex) physical 1 1 1 Affinity Capture-RNA
PRS1 YKL181W 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase physical 1 1 1 Affinity Capture-RNA
DID4 YKL002W Class E Vps protein of the ESCRT-III complex physical 1 1 1 Affinity Capture-RNA
ALR1 YOL130W Plasma membrane Mg(2+) transporter physical 1 1 1 Affinity Capture-RNA
ATG1 YGL180W Protein serine/threonine kinase physical 1 1 1 Affinity Capture-RNA
ATG13 YPR185W Regulatory subunit of the Atg1p signaling complex physical 1 1 1 Affinity Capture-RNA
CDC43 YGL155W Beta subunit of geranylgeranyltransferase type I physical 1 1 1 Affinity Capture-RNA
ARG3 YJL088W Ornithine carbamoyltransferase physical 1 1 1 Affinity Capture-RNA
CIT2 YCR005C Citrate synthase, peroxisomal isozyme involved in glyoxylate cycle physical 1 1 1 Affinity Capture-RNA
EBS1 YDR206W Protein involved in translation inhibition and nonsense-mediated decay physical 1 1 1 Affinity Capture-RNA
CUP2 YGL166W Copper-binding transcription factor physical 1 1 1 Affinity Capture-RNA
GRX5 YPL059W Glutathione-dependent oxidoreductase physical 1 1 1 Affinity Capture-RNA
GDS1 YOR355W Protein involved in histone H4 acetylation at ribosomal protein genes physical 1 1 1 Affinity Capture-RNA
HST3 YOR025W Sirtuin, histone H3 deacetylase physical 1 1 1 Affinity Capture-RNA
INO2 YDR123C Transcription factor physical 1 1 1 Affinity Capture-RNA
IRE1 YHR079C Serine-threonine kinase and endoribonuclease physical 1 1 1 Affinity Capture-RNA
ISU2 YOR226C Mitochondrial protein required for iron-sulfur protein synthesis physical 1 1 1 Affinity Capture-RNA
LEU4 YNL104C Alpha-isopropylmalate synthase (2-isopropylmalate synthase) physical 1 1 1 Affinity Capture-RNA
MCM16 YPR046W Component of the Ctf19 complex and the COMA subcomplex physical 1 1 1 Affinity Capture-RNA
GCN4 YEL009C bZIP transcriptional activator of amino acid biosynthetic genes physical 1 1 1 Affinity Capture-RNA
MSN5 YDR335W Karyopherin physical 1 1 1 Affinity Capture-RNA
HAA1 YPR008W Transcriptional activator involved in adaptation to weak acid stress physical 1 1 1 Affinity Capture-RNA
NDC80 YIL144W Component of the kinetochore-associated Ndc80 complex physical 1 1 1 Affinity Capture-RNA
HSP10 YOR020C Mitochondrial matrix co-chaperonin physical 1 1 1 Affinity Capture-RNA
NUP57 YGR119C FG-nucleoporin component of central core of the nuclear pore complex genetic 1 1 1 Negative Genetic
CLG1 YGL215W Cyclin-like protein that interacts with Pho85p physical 1 1 1 Affinity Capture-RNA
PRP5 YBR237W RNA helicase in the DEAD-box family physical 1 1 1 Affinity Capture-RNA
IME1 YJR094C Master regulator of meiosis that is active only during meiotic events physical 1 1 1 Affinity Capture-RNA
COQ5 YML110C 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase physical 1 1 1 Affinity Capture-RNA
JSN1 YJR091C Member of the Puf family of RNA-binding proteins physical 1 1 1 Affinity Capture-RNA
JSN1 YJR091C Member of the Puf family of RNA-binding proteins genetic 1 1 1 Phenotypic Enhancement
NBA1 YOL070C Protein involved in axial bud site selection physical 1 1 1 Affinity Capture-RNA
DAS2 YDR020C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
BMT2 YBR141C Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase physical 1 1 1 Affinity Capture-RNA
CTL1 YMR180C RNA 5'-triphosphatase, localizes to both the nucleus and cytoplasm physical 1 1 1 Affinity Capture-RNA
PPA2 YMR267W Mitochondrial inorganic pyrophosphatase physical 1 1 1 Affinity Capture-RNA
PNS1 YOR161C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PRR1 YKL116C Serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
ELP6 YMR312W Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex physical 1 1 1 Affinity Capture-RNA
MET14 YKL001C Adenylylsulfate kinase physical 1 1 1 Affinity Capture-RNA
BLI1 YKL061W Subunit of the BLOC-1 complex involved in endosomal maturation physical 1 1 1 Affinity Capture-RNA
BOS1 YLR078C v-SNARE (vesicle specific SNAP receptor) physical 1 1 1 Affinity Capture-RNA
GMH1 YKR030W Golgi membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
CDC27 YBL084C Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) physical 1 1 1 Affinity Capture-RNA
CLB1 YGR108W B-type cyclin involved in cell cycle progression physical 1 1 1 Affinity Capture-RNA
ELP3 YPL086C Subunit of Elongator complex physical 1 1 1 Affinity Capture-RNA
IKI1 YHR187W Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex physical 1 1 1 Affinity Capture-RNA
MRP2 YPR166C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
NFI1 YOR156C SUMO E3 ligase physical 1 1 1 Affinity Capture-RNA
CST6 YIL036W Basic leucine zipper (bZIP) transcription factor from ATF/CREB family physical 1 1 1 Affinity Capture-RNA
AMD1 YML035C AMP deaminase physical 1 1 1 Affinity Capture-RNA
BRE5 YNR051C Ubiquitin protease cofactor physical 1 1 1 Affinity Capture-RNA
CRP1 YHR146W Protein that binds to cruciform DNA structures physical 1 1 1 Affinity Capture-RNA
MSN2 YMR037C Stress-responsive transcriptional activator physical 1 1 1 Affinity Capture-RNA
IES6 YEL044W Component of the INO80 chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
CPT1 YNL130C Cholinephosphotransferase physical 1 1 1 Affinity Capture-RNA
COX2 Q0250 Subunit II of cytochrome c oxidase (Complex IV) physical 1 1 1 Affinity Capture-RNA
BUD4 YJR092W Anillin-like protein involved in bud-site selection physical 1 1 1 Affinity Capture-RNA
MOT2 YER068W Ubiquitin-protein ligase subunit of the CCR4-NOT complex physical 1 1 1 Affinity Capture-RNA
CLC1 YGR167W Clathrin light chain physical 1 1 1 Affinity Capture-RNA
DBP5 YOR046C Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family physical 1 1 1 Affinity Capture-RNA
DCD1 YHR144C Deoxycytidine monophosphate (dCMP) deaminase physical 1 1 1 Affinity Capture-RNA
ELO2 YCR034W Fatty acid elongase, involved in sphingolipid biosynthesis physical 1 1 1 Affinity Capture-RNA
HSP150 YJL159W O-mannosylated heat shock protein physical 1 1 1 Affinity Capture-RNA
HXK2 YGL253W Hexokinase isoenzyme 2 physical 1 1 1 Affinity Capture-RNA
MCM3 YEL032W Protein involved in DNA replication physical 1 1 1 Affinity Capture-RNA
MTH1 YDR277C Negative regulator of the glucose-sensing signal transduction pathway physical 1 1 1 Affinity Capture-RNA
MTR2 YKL186C mRNA transport regulator physical 1 1 1 Affinity Capture-RNA
OST3 YOR085W Gamma subunit of the oligosaccharyltransferase complex of the ER lumen physical 1 1 1 Affinity Capture-RNA
PET111 YMR257C Mitochondrial translational activator specific for the COX2 mRNA physical 1 1 1 Affinity Capture-RNA
PAM18 YLR008C Subunit of the import motor (PAM complex) physical 1 1 1 Affinity Capture-RNA
CNM67 YNL225C Component of the spindle pole body outer plaque physical 1 1 1 Affinity Capture-RNA
COX1 Q0045 Subunit I of cytochrome c oxidase (Complex IV) physical 1 1 1 Affinity Capture-RNA
MRPS9 YBR146W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
NAM9 YNL137C Mitochondrial ribosomal component of the small subunit physical 1 1 1 Affinity Capture-RNA
KAR2 YJL034W ATPase involved in protein import into the ER physical 1 1 1 Affinity Capture-RNA
OST4 YDL232W Subunit of the oligosaccharyltransferase complex of the ER lumen physical 1 1 1 Affinity Capture-RNA
OST6 YML019W Subunit of the oligosaccharyltransferase complex of the ER lumen physical 1 1 1 Affinity Capture-RNA
BUD8 YLR353W Protein involved in bud-site selection physical 1 1 1 Affinity Capture-RNA
EMP47 YFL048C Integral membrane component of ER-derived COPII-coated vesicles physical 1 1 1 Affinity Capture-RNA
GLN3 YER040W Transcriptional activator in nitrogen catabolite repression system physical 1 1 1 Affinity Capture-RNA
HAP4 YKL109W Transcription factor physical 1 1 1 Affinity Capture-RNA
MBF1 YOR298C-A Transcriptional coactivator physical 1 1 1 Affinity Capture-RNA
NUP170 YBL079W Subunit of inner ring of nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
PCL1 YNL289W Cyclin, interacts with cyclin-dependent kinase Pho85p physical 1 1 1 Affinity Capture-RNA
HIP1 YGR191W High-affinity histidine permease physical 1 1 1 Affinity Capture-RNA
MPT5 YGL178W mRNA-binding protein of the PUF family physical 1 1 1 Affinity Capture-RNA
MPT5 YGL178W mRNA-binding protein of the PUF family genetic 1 1 1 Phenotypic Enhancement
GAL80 YML051W Transcriptional regulator involved in the repression of GAL genes physical 1 1 1 Affinity Capture-RNA
EMC1 YCL045C Member of conserved endoplasmic reticulum membrane complex physical 1 1 1 Affinity Capture-RNA
ABF1 YKL112W DNA binding protein with possible chromatin-reorganizing activity physical 1 1 1 Affinity Capture-RNA
MUD2 YKL074C Protein involved in early pre-mRNA splicing genetic 1 1 1 Negative Genetic
GIC1 YHR061C Rho-family GTPase interacting protein and Cdc42p effector physical 1 1 1 Affinity Capture-RNA
NUP100 YKL068W FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
MCM7 YBR202W Component of the Mcm2-7 hexameric helicase complex physical 1 1 1 Affinity Capture-RNA
CHS3 YBR023C Chitin synthase III physical 1 1 1 Affinity Capture-RNA
LRG1 YDL240W GTPase-activating protein (GAP) physical 1 1 1 Affinity Capture-RNA
BCH1 YMR237W Member of the ChAPs family (Chs5p-Arf1p-binding proteins) physical 1 1 1 Affinity Capture-RNA
HMT1 YBR034C Nuclear SAM-dependent mono- and asymmetric methyltransferase physical 1 1 1 Affinity Capture-RNA
MID2 YLR332W O-glycosylated plasma membrane protein physical 1 1 1 Affinity Capture-RNA
PDR5 YOR153W Plasma membrane ATP-binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
GIC2 YDR309C Rho-family GTPase interacting protein and Cdc42p effector physical 1 1 1 Affinity Capture-RNA
MTF2 YDL044C Mitochondrial protein that interacts with mitochondrial RNA polymerase physical 1 1 1 Affinity Capture-RNA
PET494 YNR045W Mitochondrial translational activator specific for the COX3 mRNA physical 1 1 1 Affinity Capture-RNA
GPR1 YDL035C Plasma membrane G protein coupled receptor (GPCR) physical 1 1 1 Affinity Capture-RNA
GFD2 YCL036W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PRP22 YER013W DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase physical 1 1 1 Affinity Capture-RNA
BAT2 YJR148W Cytosolic branched-chain amino acid (BCAA) aminotransferase physical 1 1 1 Affinity Capture-RNA
OSH3 YHR073W Member of an oxysterol-binding protein family physical 1 1 1 Affinity Capture-RNA
MRI1 YPR118W 5'-methylthioribose-1-phosphate isomerase physical 1 1 1 Affinity Capture-RNA
MGA1 YGR249W Protein similar to heat shock transcription factor physical 1 1 1 Affinity Capture-RNA
AZF1 YOR113W Zinc-finger transcription factor physical 1 1 1 Affinity Capture-RNA
MIX17 YMR002W Mitochondrial intermembrane space protein physical 1 1 1 Affinity Capture-RNA
PEX27 YOR193W Peripheral peroxisomal membrane protein physical 1 1 1 Affinity Capture-RNA
PBP1 YGR178C Component of glucose deprivation induced stress granules physical 1 1 1 Affinity Capture-RNA
ATP1 YBL099W Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
OAF1 YAL051W Oleate-activated transcription factor physical 1 1 1 Affinity Capture-RNA
GAT1 YFL021W Transcriptional activator of nitrogen catabolite repression genes physical 1 1 1 Affinity Capture-RNA
ASH1 YKL185W Component of the Rpd3L histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
KEX2 YNL238W Kexin, a subtilisin-like protease (proprotein convertase) physical 1 1 1 Affinity Capture-RNA
MRPS35 YGR165W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
AUR1 YKL004W Phosphatidylinositol:ceramide phosphoinositol transferase physical 1 1 1 Affinity Capture-RNA
MFA2 YNL145W Mating pheromone a-factor physical 1 1 1 Affinity Capture-RNA
PAM16 YJL104W Subunit of the import motor (PAM complex) physical 1 1 1 Affinity Capture-RNA
BCS1 YDR375C Protein translocase and chaperone required for Complex III assembly physical 1 1 1 Affinity Capture-RNA
OXA1 YER154W Mitochondrial inner membrane insertase physical 1 1 1 Affinity Capture-RNA
COB Q0105 Cytochrome b physical 1 1 1 Affinity Capture-RNA
COX3 Q0275 Subunit III of cytochrome c oxidase (Complex IV) physical 1 1 1 Affinity Capture-RNA
PBI2 YNL015W Cytosolic inhibitor of vacuolar proteinase B (PRB1) physical 1 1 1 Affinity Capture-RNA
PMT4 YJR143C Protein O-mannosyltransferase physical 1 1 1 Affinity Capture-RNA
PLB3 YOL011W Phospholipase B (lysophospholipase) involved in lipid metabolism physical 1 1 1 Affinity Capture-RNA
HAC1 YFL031W Basic leucine zipper (bZIP) transcription factor (ATF/CREB1 homolog) physical 1 1 1 Affinity Capture-RNA
PAN3 YKL025C Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex physical 1 1 1 Affinity Capture-RNA
PHB1 YGR132C Subunit of the prohibitin complex (Phb1p-Phb2p) physical 1 1 1 Affinity Capture-RNA
ASN1 YPR145W Asparagine synthetase physical 1 1 1 Affinity Capture-RNA
ENT1 YDL161W Epsin-like protein involved in endocytosis and actin patch assembly physical 1 1 1 Affinity Capture-RNA
HBT1 YDL223C Shmoo tip protein, substrate of Hub1p ubiquitin-like protein physical 1 1 1 Affinity Capture-RNA
COX14 YML129C Mitochondrial cytochrome c oxidase (complex IV) assembly factor physical 1 1 1 Affinity Capture-RNA
ACM1 YPL267W Pseudosubstrate inhibitor of the APC/C physical 1 1 1 Affinity Capture-RNA
CLB3 YDL155W B-type cyclin involved in cell cycle progression physical 1 1 1 Affinity Capture-RNA
PDR12 YPL058C Plasma membrane ATP-binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
AQR1 YNL065W Plasma membrane transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
NOP8 YOL144W Nucleolar protein required for 60S ribosomal subunit biogenesis genetic 1 1 1 Positive Genetic
LEU1 YGL009C Isopropylmalate isomerase physical 1 1 1 Affinity Capture-RNA
INN1 YNL152W Essential protein that associates with contractile actomyosin ring physical 1 1 1 Affinity Capture-RNA
ASG1 YIL130W Zinc cluster protein proposed to be a transcriptional regulator physical 1 1 1 Affinity Capture-RNA
PIN3 YPR154W Negative regulator of actin nucleation-promoting factor activity physical 1 1 1 Affinity Capture-RNA
IXR1 YKL032C Transcriptional repressor that regulates hypoxic genes during normoxia physical 1 1 1 Affinity Capture-RNA
MIT1 YEL007W Transcriptional regulator of pseudohyphal growth physical 1 1 1 Affinity Capture-RNA
HOT13 YKL084W Zinc-binding mitochondrial intermembrane space (IMS) protein physical 1 1 1 Affinity Capture-RNA
CCC1 YLR220W Vacuolar Fe2+/Mn2+ transporter physical 1 1 1 Affinity Capture-RNA
COY1 YKL179C Golgi membrane protein with similarity to mammalian CASP physical 1 1 1 Affinity Capture-RNA
POM152 YMR129W Glycoprotein subunit of transmembrane ring of nuclear pore complex physical 1 1 1 Affinity Capture-RNA
FUR1 YHR128W Uracil phosphoribosyltransferase physical 1 1 1 Affinity Capture-RNA
ATP17 YDR377W Subunit f of the F0 sector of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
IZH4 YOL101C Membrane protein involved in zinc ion homeostasis physical 1 1 1 Affinity Capture-RNA
GPB1 YOR371C Multistep regulator of cAMP-PKA signaling physical 1 1 1 Affinity Capture-RNA
CPS1 YJL172W Vacuolar carboxypeptidase S physical 1 1 1 Affinity Capture-RNA
CAT2 YML042W Carnitine acetyl-CoA transferase physical 1 1 1 Affinity Capture-RNA
HCM1 YCR065W Forkhead transcription factor physical 1 1 1 Affinity Capture-RNA
EXG2 YDR261C Exo-1,3-beta-glucanase physical 1 1 1 Affinity Capture-RNA
BTS1 YPL069C Geranylgeranyl diphosphate synthase (GGPPS) physical 1 1 1 Affinity Capture-RNA
ARR3 YPR201W Plasma membrane metalloid/H+ antiporter physical 1 1 1 Affinity Capture-RNA
HLR1 YDR528W Protein involved in regulation of cell wall composition and integrity physical 1 1 1 Affinity Capture-RNA
PDP3 YLR455W Component of the NuA3b histone acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
COX15 YER141W Heme a synthase physical 1 1 1 Affinity Capture-RNA
EGT2 YNL327W Glycosylphosphatidylinositol (GPI)-anchored cell wall endoglucanase physical 1 1 1 Affinity Capture-RNA
PDR11 YIL013C ATP-binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
HEH2 YDR458C Inner nuclear membrane (INM) protein physical 1 1 1 Affinity Capture-RNA
GAT2 YMR136W Protein containing GATA family zinc finger motifs physical 1 1 1 Affinity Capture-RNA
CAN1 YEL063C Plasma membrane arginine permease physical 1 1 1 Affinity Capture-RNA
MSC2 YDR205W Endoplasmic reticulum zinc transporter physical 1 1 1 Affinity Capture-RNA
ERG2 YMR202W C-8 sterol isomerase physical 1 1 1 Affinity Capture-RNA
AGP2 YBR132C Plasma membrane regulator of polyamine and carnitine transport physical 1 1 1 Affinity Capture-RNA
ESBP6 YNL125C Protein with similarity to monocarboxylate permeases physical 1 1 1 Affinity Capture-RNA
GDA1 YEL042W Guanosine diphosphatase located in the Golgi physical 1 1 1 Affinity Capture-RNA
PAM17 YKR065C Constituent of the TIM23 complex physical 1 1 1 Affinity Capture-RNA
ERI1 YPL096C-A Endoplasmic reticulum membrane protein that binds and inhibits Ras2p physical 1 1 1 Affinity Capture-RNA
MSS11 YMR164C Transcription factor physical 1 1 1 Affinity Capture-RNA
DSF2 YBR007C Deletion suppressor of mpt5 mutation physical 1 1 1 Affinity Capture-RNA
EXP1 YDL121C A cargo receptor protein for Pma1p physical 1 1 1 Affinity Capture-RNA
ATP15 YPL271W Epsilon subunit of the F1 sector of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
MRH1 YDR033W Protein that localizes primarily to the plasma membrane physical 1 1 1 Affinity Capture-RNA
NCE102 YPR149W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PHO11 YAR071W One of three repressible acid phosphatases physical 1 1 1 Affinity Capture-RNA
IRC7 YFR055W Cysteine desulphydrase, enables growth on cysteine as nitrogen source physical 1 1 1 Affinity Capture-RNA
ASE1 YOR058C Mitotic spindle midzone-localized microtubule bundling protein physical 1 1 1 Affinity Capture-RNA
NGR1 YBR212W RNA binding protein that negatively regulates growth rate physical 1 1 1 Affinity Capture-RNA
MRPL11 YDL202W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MBA1 YBR185C Membrane-associated mitochondrial ribosome receptor physical 1 1 1 Affinity Capture-RNA
PBP4 YDL053C Pbp1p binding protein physical 1 1 1 Affinity Capture-RNA
HRQ1 YDR291W 3'-5' DNA helicase of the conserved RecQ family genetic 1 1 1 Positive Genetic
DSE4 YNR067C Daughter cell-specific secreted protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
HXK1 YFR053C Hexokinase isoenzyme 1 physical 1 1 1 Protein-RNA
MSS4 YDR208W Phosphatidylinositol-4-phosphate 5-kinase physical 1 1 1 Affinity Capture-RNA
LYS4 YDR234W Homoaconitase physical 1 1 1 Affinity Capture-RNA
PAM1 YDR251W Essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
AIM22 YJL046W Lipoate-protein ligase physical 1 1 1 Affinity Capture-RNA
AEP3 YPL005W Peripheral mitochondrial inner membrane protein genetic 1 1 1 Negative Genetic
PDC2 YDR081C Transcription factor for thiamine-regulated genes physical 1 1 1 Affinity Capture-RNA
MRPS8 YMR158W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
GEP7 YGL057C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PMR1 YGL167C High affinity Ca2+/Mn2+ P-type ATPase physical 1 1 1 Affinity Capture-RNA
FIG2 YCR089W Cell wall adhesin, expressed specifically during mating physical 1 1 1 Affinity Capture-RNA
IRC3 YDR332W Double-stranded DNA-dependent helicase of the DExH/D-box family physical 1 1 1 Affinity Capture-RNA
MRP35 YNL122C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
ATP12 YJL180C Assembly factor for F1 sector of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
CYB5 YNL111C Cytochrome b5 physical 1 1 1 Affinity Capture-RNA
FTR1 YER145C High affinity iron permease physical 1 1 1 Affinity Capture-RNA
CWP2 YKL096W-A Covalently linked cell wall mannoprotein physical 1 1 1 Affinity Capture-RNA
AQY3 YFL054C Putative channel-like protein physical 1 1 1 Affinity Capture-RNA
CYK3 YDL117W SH3-domain protein located in the bud neck and cytokinetic actin ring physical 1 1 1 Affinity Capture-RNA
COA4 YLR218C Twin Cx(9)C protein involved in cytochrome c oxidase organization physical 1 1 1 Affinity Capture-RNA
PSP2 YML017W Asn rich cytoplasmic protein that contains RGG motifs physical 1 1 1 Affinity Capture-RNA
MRPL40 YPL173W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
ECM3 YOR092W Non-essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
ANY1 YMR010W Protein involved in phospholipid flippase function physical 1 1 1 Affinity Capture-RNA
PKR1 YMR123W V-ATPase assembly factor physical 1 1 1 Affinity Capture-RNA
MRPS17 YMR188C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
IDP1 YDL066W Mitochondrial NADP-specific isocitrate dehydrogenase physical 1 1 1 Affinity Capture-RNA
MRPL22 YNL177C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
GIP4 YAL031C Cytoplasmic protein that regulates protein phosphatase 1 Glc7p physical 1 1 1 Affinity Capture-RNA
MRPS12 YNR036C Mitochondrial protein physical 1 1 1 Affinity Capture-RNA
MSE1 YOL033W Mitochondrial glutamyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
MSB1 YOR188W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
FAS1 YKL182W Beta subunit of fatty acid synthetase physical 1 1 1 Affinity Capture-RNA
JID1 YPR061C Probable Hsp40p co-chaperone physical 1 1 1 Affinity Capture-RNA
AIM23 YJL131C Mitochondrial translation initiation factor 3 (IF3, mIF3) physical 1 1 1 Affinity Capture-RNA
MRPL32 YCR003W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
PST1 YDR055W Cell wall protein that contains a putative GPI-attachment site physical 1 1 1 Affinity Capture-RNA
MUB1 YMR100W MYND domain-containing protein physical 1 1 1 Affinity Capture-RNA
COA3 YJL062W-A Mitochondrial protein required for cytochrome c oxidase assembly physical 1 1 1 Affinity Capture-RNA
PSA1 YDL055C GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase) physical 1 1 1 Affinity Capture-RNA
KTR6 YPL053C Probable mannosylphosphate transferase physical 1 1 1 Affinity Capture-RNA
MRPL27 YBR282W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
IPT1 YDR072C Inositolphosphotransferase physical 1 1 1 Affinity Capture-RNA
HEM1 YDR232W 5-aminolevulinate synthase physical 1 1 1 Affinity Capture-RNA
CMK2 YOL016C Calmodulin-dependent protein kinase physical 1 1 1 Affinity Capture-RNA
CCW22 YDR134C Cell wall protein physical 1 1 1 Affinity Capture-RNA
ADD37 YMR184W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
CAB1 YDR531W Pantothenate kinase, ATP:D-pantothenate 4'-phosphotransferase physical 1 1 1 Affinity Capture-RNA
CMR3 YPR013C Putative zinc finger protein physical 1 1 1 Affinity Capture-RNA
ARN2 YHL047C Transporter physical 1 1 1 Affinity Capture-RNA
FPS1 YLL043W Aquaglyceroporin, plasma membrane channel physical 1 1 1 Affinity Capture-RNA
CTH1 YDR151C mRNA binding protein, member of the CCCH zinc finger family physical 1 1 1 Affinity Capture-RNA
CYC3 YAL039C Cytochrome c heme lyase (holocytochrome c synthase) physical 1 1 1 Affinity Capture-RNA
AST1 YBL069W Lipid raft associated protein physical 1 1 1 Affinity Capture-RNA
MSN4 YKL062W Stress-responsive transcriptional activator physical 1 1 1 Affinity Capture-RNA
PTK2 YJR059W Serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
DIF1 YLR437C Protein that regulates nuclear import of Rnr2p and Rnr4p physical 1 1 1 Affinity Capture-RNA
MLF3 YNL074C Serine-rich protein of unknown function physical 1 1 1 Affinity Capture-RNA
AIM39 YOL053W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
GUP1 YGL084C Plasma membrane protein involved in remodeling GPI anchors physical 1 1 1 Affinity Capture-RNA
PMT6 YGR199W Protein O-mannosyltransferase physical 1 1 1 Affinity Capture-RNA
TIF1 YKR059W Translation initiation factor eIF4A physical 1 1 1 Protein-RNA
ZEO1 YOL109W Peripheral membrane protein of the plasma membrane physical 1 1 1 Affinity Capture-RNA
YDR524C-B YDR524C-B Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YCR024C-B YCR024C-B Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
TPO1 YLL028W Polyamine transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
SED1 YDR077W Major stress-induced structural GPI-cell wall glycoprotein physical 1 1 1 Affinity Capture-RNA
YDR222W YDR222W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
TDH2 YJR009C Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 2 physical 1 1 1 Affinity Capture-RNA
RPL23A YBL087C Ribosomal 60S subunit protein L23A physical 1 1 1 Affinity Capture-RNA
RPL20A YMR242C Ribosomal 60S subunit protein L20A physical 1 1 1 Affinity Capture-RNA
RPS2 YGL123W Protein component of the small (40S) subunit physical 1 1 1 Affinity Capture-RNA
TPO2 YGR138C Polyamine transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
RPS22A YJL190C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPL38 YLR325C Ribosomal 60S subunit protein L38 physical 1 1 1 Affinity Capture-RNA
RPP0 YLR340W Conserved ribosomal protein P0 of the ribosomal stalk physical 1 1 1 Affinity Capture-RNA
SOD1 YJR104C Cytosolic copper-zinc superoxide dismutase physical 1 1 1 Affinity Capture-RNA
RPL37A YLR185W Ribosomal 60S subunit protein L37A physical 1 1 1 Affinity Capture-RNA
TSA1 YML028W Thioredoxin peroxidase physical 1 1 1 Affinity Capture-RNA
RPL7B YPL198W Ribosomal 60S subunit protein L7B physical 1 1 1 Affinity Capture-RNA
RPS15 YOL040C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RBA50 YDR527W Protein involved in transcription physical 1 1 1 Affinity Capture-RNA
YRO2 YBR054W Protein with a putative role in response to acid stress physical 1 1 1 Affinity Capture-RNA
YLR297W YLR297W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RPL28 YGL103W Ribosomal 60S subunit protein L28 physical 1 1 1 Affinity Capture-RNA
RPS11B YBR048W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPS4A YJR145C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
YEF3 YLR249W Translation elongation factor 3 physical 1 1 1 Affinity Capture-RNA
RPS10A YOR293W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPS5 YJR123W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
SSC1 YJR045C Hsp70 family ATPase physical 1 1 1 Affinity Capture-RNA
RPL7A YGL076C Ribosomal 60S subunit protein L7A physical 1 1 1 Affinity Capture-RNA
SSO2 YMR183C Plasma membrane t-SNARE physical 1 1 1 Affinity Capture-RNA
RPL14A YKL006W Ribosomal 60S subunit protein L14A physical 1 1 1 Affinity Capture-RNA
RPL8B YLL045C Ribosomal 60S subunit protein L8A physical 1 1 1 Affinity Capture-RNA
RPP2A YOL039W Ribosomal protein P2 alpha physical 1 1 1 Affinity Capture-RNA
RPL36B YPL249C-A Ribosomal 60S subunit protein L36B physical 1 1 1 Affinity Capture-RNA
RPL40B YKR094C Ubiquitin-ribosomal 60S subunit protein L40B fusion protein physical 1 1 1 Affinity Capture-RNA
YNL190W YNL190W Hydrophilin essential in desiccation-rehydration process physical 1 1 1 Affinity Capture-RNA
TMC1 YOR052C AN1-type zinc finger protein, effector of proteotoxic stress response physical 1 1 1 Affinity Capture-RNA
RPS6B YBR181C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
YOL014W YOL014W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SSB1 YDL229W Cytoplasmic ATPase that is a ribosome-associated molecular chaperone physical 1 1 1 Affinity Capture-RNA
RPS0B YLR048W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPL23B YER117W Ribosomal 60S subunit protein L23B physical 1 1 1 Affinity Capture-RNA
RPL6B YLR448W Ribosomal 60S subunit protein L6B physical 1 1 1 Affinity Capture-RNA
RPL20B YOR312C Ribosomal 60S subunit protein L20B physical 1 1 1 Affinity Capture-RNA
UTR2 YEL040W Chitin transglycosylase physical 1 1 1 Affinity Capture-RNA
TEF1 YPR080W Translational elongation factor EF-1 alpha physical 1 1 1 Affinity Capture-RNA
SSB2 YNL209W Cytoplasmic ATPase that is a ribosome-associated molecular chaperone physical 1 1 1 Affinity Capture-RNA
RPL42B YHR141C Ribosomal 60S subunit protein L42B physical 1 1 1 Affinity Capture-RNA
RPS8B YER102W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RBG1 YAL036C Member of the DRG family of GTP-binding proteins physical 1 1 1 Affinity Capture-RNA
RPL13B YMR142C Ribosomal 60S subunit protein L13B physical 1 1 1 Affinity Capture-RNA
TIM10 YHR005C-A Essential protein of the mitochondrial intermembrane space physical 1 1 1 Affinity Capture-RNA
SSA2 YLL024C HSP70 family ATP-binding protein physical 1 1 1 Affinity Capture-RNA
RPL19A YBR084C-A Ribosomal 60S subunit protein L19A physical 1 1 1 Affinity Capture-RNA
RPL26A YLR344W Ribosomal 60S subunit protein L26A physical 1 1 1 Affinity Capture-RNA
RPS25B YLR333C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
TOS1 YBR162C Covalently-bound cell wall protein of unknown function physical 1 1 1 Affinity Capture-RNA
SPC3 YLR066W Subunit of signal peptidase complex physical 1 1 1 Affinity Capture-RNA
RPI1 YIL119C Transcription factor, allelic differences between S288C and Sigma1278b physical 1 1 1 Affinity Capture-RNA
RPL34A YER056C-A Ribosomal 60S subunit protein L34A physical 1 1 1 Affinity Capture-RNA
RPL35B YDL136W Ribosomal 60S subunit protein L35B physical 1 1 1 Affinity Capture-RNA
TEF4 YKL081W Gamma subunit of translational elongation factor eEF1B physical 1 1 1 Affinity Capture-RNA
SAP1 YER047C Putative ATPase of the AAA family physical 1 1 1 Affinity Capture-RNA
SUN4 YNL066W Cell wall protein related to glucanases localized in birth scars physical 1 1 1 Affinity Capture-RNA
YPS1 YLR120C Aspartic protease physical 1 1 1 Affinity Capture-RNA
SDO1 YLR022C Guanine nucleotide exchange factor (GEF) for Ria1p physical 1 1 1 Affinity Capture-RNA
RPS21A YKR057W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
SVF1 YDR346C Protein with a potential role in cell survival pathways physical 1 1 1 Affinity Capture-RNA
YNL140C YNL140C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RPS26B YER131W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
TIF3 YPR163C Translation initiation factor eIF-4B physical 1 1 1 Affinity Capture-RNA
TIF3 YPR163C Translation initiation factor eIF-4B genetic 1 1 1 Negative Genetic
STE2 YFL026W Receptor for alpha-factor pheromone physical 1 1 1 Affinity Capture-RNA
RPS17B YDR447C Ribosomal protein 51 (rp51) of the small (40s) subunit physical 1 1 1 Affinity Capture-RNA
SCW4 YGR279C Cell wall protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
RPL11B YGR085C Ribosomal 60S subunit protein L11B physical 1 1 1 Affinity Capture-RNA
RPL9A YGL147C Ribosomal 60S subunit protein L9A physical 1 1 1 Affinity Capture-RNA
RPS24A YER074W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPS23A YGR118W Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPL1B YGL135W Ribosomal 60S subunit protein L1B physical 1 1 1 Affinity Capture-RNA
TIF4631 YGR162W Translation initiation factor eIF4G and scaffold protein physical 1 1 1 Affinity Capture-RNA
YKL091C YKL091C Putative phosphatidylinositol/phosphatidylcholine transfer protein physical 1 1 1 Affinity Capture-RNA
RPL27B YDR471W Ribosomal 60S subunit protein L27B physical 1 1 1 Affinity Capture-RNA
RPS7B YNL096C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPS4B YHR203C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
SAM1 YLR180W S-adenosylmethionine synthetase physical 1 1 1 Affinity Capture-RNA
RAS2 YNL098C GTP-binding protein physical 1 1 1 Affinity Capture-RNA
RPS24B YIL069C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
SND3 YBR106W Involved in SRP-independent protein targeting to the ER physical 1 1 1 Affinity Capture-RNA
RSM19 YNR037C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
TPO3 YPR156C Polyamine transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
RRP5 YMR229C RNA binding protein involved in synthesis of 18S and 5.8S rRNAs physical 1 1 1 Affinity Capture-RNA
VTC1 YER072W Regulatory subunit of the vacuolar transporter chaperone (VTC) complex physical 1 1 1 Affinity Capture-RNA
RPL6A YML073C Ribosomal 60S subunit protein L6A physical 1 1 1 Affinity Capture-RNA
RHO1 YPR165W GTP-binding protein of the rho subfamily of Ras-like proteins physical 1 1 1 Affinity Capture-RNA
RPL16B YNL069C Ribosomal 60S subunit protein L16B physical 1 1 1 Affinity Capture-RNA
RPS9A YPL081W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
URA1 YKL216W Dihydroorotate dehydrogenase physical 1 1 1 Affinity Capture-RNA
RPS29B YDL061C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
TUF1 YOR187W Mitochondrial translation elongation factor Tu (EF-Tu) physical 1 1 1 Affinity Capture-RNA
RPS10B YMR230W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPS16B YDL083C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPA43 YOR340C RNA polymerase I subunit A43 physical 1 1 1 Affinity Capture-RNA
REA1 YLR106C Huge dynein-related AAA-type ATPase (midasin) physical 1 1 1 Affinity Capture-RNA
SNA2 YDR525W-A Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RPL36A YMR194W Ribosomal 60S subunit protein L36A physical 1 1 1 Affinity Capture-RNA
RPS7A YOR096W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
YHB1 YGR234W Nitric oxide oxidoreductase physical 1 1 1 Affinity Capture-RNA
TOS6 YNL300W Glycosylphosphatidylinositol-dependent cell wall protein physical 1 1 1 Affinity Capture-RNA
SWI1 YPL016W Subunit of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
RPS18A YDR450W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
SFK1 YKL051W Protein that regulates phospholipid asymmetry at plasma membrane physical 1 1 1 Affinity Capture-RNA
TDA1 YMR291W Protein kinase of unknown cellular role physical 1 1 1 Affinity Capture-RNA
SRL1 YOR247W Mannoprotein that exhibits a tight association with the cell wall physical 1 1 1 Affinity Capture-RNA
RGL1 YPL066W Regulator of Rho1p signaling, cofactor of Tus1p physical 1 1 1 Affinity Capture-RNA
RNR1 YER070W Major isoform of large subunit of ribonucleotide-diphosphate reductase physical 1 1 1 Affinity Capture-RNA
SRP40 YKR092C Nucleolar serine-rich protein physical 1 1 1 Affinity Capture-RNA
VAR1 Q0140 Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
RCR1 YBR005W Plasma membrane (PM) ubiquitin ligase-substrate adaptor physical 1 1 1 Affinity Capture-RNA
RPL22A YLR061W Ribosomal 60S subunit protein L22A physical 1 1 1 Affinity Capture-RNA
URA2 YJL130C Bifunctional carbamoylphosphate synthetase/aspartate transcarbamylase physical 1 1 1 Affinity Capture-RNA
RPL33A YPL143W Ribosomal 60S subunit protein L33A physical 1 1 1 Affinity Capture-RNA
STP4 YDL048C Protein containing a Kruppel-type zinc-finger domain physical 1 1 1 Affinity Capture-RNA
SCW11 YGL028C Cell wall protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
YIP1 YGR172C Integral membrane protein physical 1 1 1 Affinity Capture-RNA
TOM20 YGR082W Component of the TOM (translocase of outer membrane) complex physical 1 1 1 Affinity Capture-RNA
STE6 YKL209C Plasma membrane ATP-binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
YPR170W-B YPR170W-B Putative, non-essential component vacuolar ATPase physical 1 1 1 Affinity Capture-RNA
VMA1 YDL185W Subunit A of the V1 peripheral membrane domain of V-ATPase physical 1 1 1 Affinity Capture-RNA
RPS18B YML026C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
TIP1 YBR067C Major cell wall mannoprotein with possible lipase activity physical 1 1 1 Affinity Capture-RNA
RPL27A YHR010W Ribosomal 60S subunit protein L27A physical 1 1 1 Affinity Capture-RNA
SUP35 YDR172W Translation termination factor eRF3 physical 1 1 1 Affinity Capture-RNA
SUP35 YDR172W Translation termination factor eRF3 genetic 1 1 1 Positive Genetic
SEC53 YFL045C Phosphomannomutase physical 1 1 1 Affinity Capture-RNA
YLR342W-A YLR342W-A Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YBR016W YBR016W Tail-anchored plasma membrane protein with a conserved CYSTM module physical 1 1 1 Affinity Capture-RNA
YML053C YML053C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SIS1 YNL007C Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p physical 1 1 1 Affinity Capture-RNA
XRN1 YGL173C Evolutionarily-conserved 5'-3' exonuclease physical 1 1 1 Affinity Capture-RNA
SNC2 YOR327C Vesicle membrane receptor protein (v-SNARE) physical 1 1 1 Affinity Capture-RNA
SEC31 YDL195W Component of the Sec13p-Sec31p complex of the COPII vesicle coat physical 1 1 1 Affinity Capture-RNA
RPO21 YDL140C RNA polymerase II largest subunit B220 physical 1 1 1 Affinity Capture-RNA
VTC4 YJL012C Vacuolar membrane polyphosphate polymerase physical 1 1 1 Affinity Capture-RNA
TCB3 YML072C Cortical ER protein involved in ER-plasma membrane tethering physical 1 1 1 Affinity Capture-RNA
RPL18B YNL301C Ribosomal 60S subunit protein L18B physical 1 1 1 Affinity Capture-RNA
RSM27 YGR215W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
SUR7 YML052W Plasma membrane protein, component of eisosomes physical 1 1 1 Affinity Capture-RNA
TOM40 YMR203W Component of the TOM (translocase of outer membrane) complex physical 1 1 1 Affinity Capture-RNA
YBT1 YLL048C Transporter of the ATP-binding cassette (ABC) family physical 1 1 1 Affinity Capture-RNA
RSM10 YDR041W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
RPL2A YFR031C-A Ribosomal 60S subunit protein L2A physical 1 1 1 Affinity Capture-RNA
SRP1 YNL189W Karyopherin alpha homolog physical 1 1 1 Affinity Capture-RNA
RPL1A YPL220W Ribosomal 60S subunit protein L1A physical 1 1 1 Affinity Capture-RNA
SUR1 YPL057C Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit physical 1 1 1 Affinity Capture-RNA
SPL2 YHR136C Protein with similarity to cyclin-dependent kinase inhibitors physical 1 1 1 Affinity Capture-RNA
TAT2 YOL020W High affinity tryptophan and tyrosine permease physical 1 1 1 Affinity Capture-RNA
YMR209C YMR209C Putative S-adenosylmethionine-dependent methyltransferase physical 1 1 1 Affinity Capture-RNA
SFL1 YOR140W Transcriptional repressor and activator physical 1 1 1 Affinity Capture-RNA
YPT7 YML001W Rab family GTPase physical 1 1 1 Affinity Capture-RNA
RPL17B YJL177W Ribosomal 60S subunit protein L17B physical 1 1 1 Affinity Capture-RNA
SWI3 YJL176C Subunit of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
TIM17 YJL143W Essential component of the TIM23 complex physical 1 1 1 Affinity Capture-RNA
RPS27A YKL156W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
VHS1 YDR247W Cytoplasmic serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
THR4 YCR053W Threonine synthase physical 1 1 1 Affinity Capture-RNA
TIM23 YNR017W Essential component of the TIM23 complex physical 1 1 1 Affinity Capture-RNA
VHR2 YER064C Non-essential nuclear protein physical 1 1 1 Affinity Capture-RNA
YIP3 YNL044W Protein localized to COPII vesicles physical 1 1 1 Affinity Capture-RNA
YAP6 YDR259C Basic leucine zipper (bZIP) transcription factor physical 1 1 1 Affinity Capture-RNA
RCF1 YML030W Cytochrome c oxidase subunit physical 1 1 1 Affinity Capture-RNA
YBR071W YBR071W Protein of unknown function found in the cytoplasm and bud neck physical 1 1 1 Affinity Capture-RNA
SEC13 YLR208W Structural component of 3 complexes physical 1 1 1 Affinity Capture-RNA
RER2 YBR002C Forms the dehydrodolichyl diphosphate synthase (DDS) complex with NUS1 physical 1 1 1 Affinity Capture-RNA
SNF4 YGL115W Activating gamma subunit of the AMP-activated Snf1p kinase complex physical 1 1 1 Affinity Capture-RNA
WTM2 YOR229W Transcriptional modulator physical 1 1 1 Affinity Capture-RNA
SNQ2 YDR011W Plasma membrane ATP-binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
RLI1 YDR091C Essential Fe-S protein physical 1 1 1 Affinity Capture-RNA
UTP22 YGR090W Component of the small-subunit processome physical 1 1 1 Affinity Capture-RNA
SVL3 YPL032C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PUF3 YLL013C Protein of the mitochondrial outer surface physical 1 1 1 Affinity Capture-RNA
SAP155 YFR040W Protein required for function of the Sit4p protein phosphatase physical 1 1 1 Affinity Capture-RNA
YBR238C YBR238C Mitochondrial membrane protein physical 1 1 1 Affinity Capture-RNA
SKI2 YLR398C Ski complex component and putative RNA helicase physical 1 1 1 Affinity Capture-RNA
VMA5 YKL080W Subunit C of the V1 peripheral membrane domain of V-ATPase physical 1 1 1 Affinity Capture-RNA
TRI1 YMR233W Non-essential sumoylated protein of unknown function physical 1 1 1 Affinity Capture-RNA
RPC19 YNL113W RNA polymerase subunit AC19 physical 1 1 1 Affinity Capture-RNA
SER2 YGR208W Phosphoserine phosphatase of the phosphoglycerate pathway physical 1 1 1 Affinity Capture-RNA
SUI2 YJR007W Alpha subunit of the translation initiation factor eIF2 physical 1 1 1 Affinity Capture-RNA
YDR261C-D YDR261C-D Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
RTN1 YDR233C Reticulon protein physical 1 1 1 Affinity Capture-RNA
YIL089W YIL089W Protein of unknown function found in the ER and vacuole lumen physical 1 1 1 Affinity Capture-RNA
RSM23 YGL129C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
UTP10 YJL109C Nucleolar protein physical 1 1 1 Affinity Capture-RNA
RAX2 YLR084C Protein required for the maintenance of bud site selection physical 1 1 1 Affinity Capture-RNA
YLR177W YLR177W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SKS1 YPL026C Putative serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
YLR278C YLR278C Zinc-cluster protein physical 1 1 1 Affinity Capture-RNA
RSM26 YJR101W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
ZRC1 YMR243C Vacuolar membrane zinc transporter physical 1 1 1 Affinity Capture-RNA
TPS2 YDR074W Phosphatase subunit of the trehalose-6-P synthase/phosphatase complex physical 1 1 1 Affinity Capture-RNA
UBP3 YER151C Ubiquitin-specific protease that cleaves Ub-protein fusions physical 1 1 1 Affinity Capture-RNA
VPS35 YJL154C Endosomal subunit of membrane-associated retromer complex physical 1 1 1 Affinity Capture-RNA
YDJ1 YNL064C Type I HSP40 co-chaperone physical 1 1 1 Affinity Capture-RNA
TUB2 YFL037W Beta-tubulin physical 1 1 1 Affinity Capture-RNA
UTP8 YGR128C Nucleolar protein required for export of tRNAs from the nucleus physical 1 1 1 Affinity Capture-RNA
PUF4 YGL014W Member of the PUF protein family physical 1 1 1 Affinity Capture-RNA
PUF4 YGL014W Member of the PUF protein family genetic 1 1 1 Phenotypic Enhancement
SRO9 YCL037C Cytoplasmic RNA-binding protein physical 1 1 1 Affinity Capture-RNA
TIM11 YDR322C-A Subunit e of mitochondrial F1F0-ATPase physical 1 1 1 Affinity Capture-RNA
SWI4 YER111C DNA binding component of the SBF complex (Swi4p-Swi6p) physical 1 1 1 Affinity Capture-RNA
YOR385W YOR385W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SET2 YJL168C Histone methyltransferase with a role in transcriptional elongation physical 1 1 1 Affinity Capture-RNA
UTP14 YML093W Subunit of U3-containing Small Subunit (SSU) processome complex physical 1 1 1 Affinity Capture-RNA
YCP4 YCR004C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
VPS74 YDR372C Golgi PI4K effector, PtdIns4P sensor, and retention receptor physical 1 1 1 Affinity Capture-RNA
YML6 YML025C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
STD1 YOR047C Protein involved in control of glucose-regulated gene expression physical 1 1 1 Affinity Capture-RNA
SYO1 YDL063C Transport adaptor or symportin physical 1 1 1 Affinity Capture-RNA
TPD3 YAL016W Regulatory subunit A of the heterotrimeric PP2A complex physical 1 1 1 Affinity Capture-RNA
RCK1 YGL158W Protein kinase involved in oxidative stress response physical 1 1 1 Affinity Capture-RNA
YDL129W YDL129W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RSM18 YER050C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
SWI5 YDR146C Transcription factor that recruits Mediator and Swi/Snf complexes physical 1 1 1 Affinity Capture-RNA
YDR210W YDR210W Predicted tail-anchored plasma membrane protein physical 1 1 1 Affinity Capture-RNA
YGR054W YGR054W Eukaryotic initiation factor eIF2A physical 1 1 1 Affinity Capture-RNA
SPA2 YLL021W Component of the polarisome physical 1 1 1 Affinity Capture-RNA
YDR262W YDR262W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
THI7 YLR237W Plasma membrane transporter responsible for the uptake of thiamine physical 1 1 1 Affinity Capture-RNA
VTC2 YFL004W Regulatory subunit of the vacuolar transporter chaperone (VTC) complex physical 1 1 1 Affinity Capture-RNA
UBA1 YKL210W Ubiquitin activating enzyme (E1) physical 1 1 1 Affinity Capture-RNA
SST2 YLR452C GTPase-activating protein for Gpa1p physical 1 1 1 Affinity Capture-RNA
RSM28 YDR494W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
TRM1 YDR120C tRNA methyltransferase physical 1 1 1 Affinity Capture-RNA
URM1 YIL008W Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs physical 1 1 1 Affinity Capture-RNA
URA7 YBL039C Major CTP synthase isozyme (see also URA8) physical 1 1 1 Affinity Capture-RNA
SYP1 YCR030C Negative regulator of WASP-Arp23 complex physical 1 1 1 Affinity Capture-RNA
YGL036W YGL036W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RAD6 YGL058W Ubiquitin-conjugating enzyme (E2) physical 1 1 1 Affinity Capture-RNA
YHR214C-C YHR214C-C Retrotransposon TYA Gag gene co-transcribed with TYB Pol physical 1 1 1 Affinity Capture-RNA
PUP1 YOR157C Beta 2 subunit of the 20S proteasome physical 1 1 1 Affinity Capture-RNA
TDA6 YPR157W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SMD1 YGR074W Core Sm protein Sm D1 physical 1 1 1 Affinity Capture-RNA
YBL028C YBL028C Protein of unknown function that may interact with ribosomes physical 1 1 1 Affinity Capture-RNA
SXM1 YDR395W Nuclear transport factor (karyopherin) physical 1 1 1 Affinity Capture-RNA
THR1 YHR025W Homoserine kinase physical 1 1 1 Affinity Capture-RNA
YHI9 YHR029C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RPC11 YDR045C RNA polymerase III subunit C11 physical 1 1 1 Affinity Capture-RNA
SLM2 YNL047C Phosphoinositide PI4,5P(2) binding protein, forms a complex with Slm1p physical 1 1 1 Affinity Capture-RNA
RPN1 YHR027C Non-ATPase base subunit of the 19S RP of the 26S proteasome physical 1 1 1 Affinity Capture-RNA
RPO41 YFL036W Mitochondrial RNA polymerase physical 1 1 1 Affinity Capture-RNA
SAL1 YNL083W ADP/ATP transporter physical 1 1 1 Affinity Capture-RNA
TRS23 YDR246W Core component of transport protein particle (TRAPP) complexes I-III physical 1 1 1 Affinity Capture-RNA
TAF3 YPL011C TFIID subunit (47 kDa) physical 1 1 1 Affinity Capture-RNA
UPS1 YLR193C Phosphatidic acid transfer protein physical 1 1 1 Affinity Capture-RNA
SDH4 YDR178W Membrane anchor subunit of succinate dehydrogenase (SDH) physical 1 1 1 Affinity Capture-RNA
RPC25 YKL144C RNA polymerase III subunit C25 physical 1 1 1 Affinity Capture-RNA
TRA1 YHR099W Subunit of SAGA and NuA4 histone acetyltransferase complexes physical 1 1 1 Affinity Capture-RNA
SRP72 YPL210C Core component of the signal recognition particle (SRP) physical 1 1 1 Affinity Capture-RNA
TRM7 YBR061C 2'-O-ribose methyltransferase physical 1 1 1 Affinity Capture-RNA
UTP30 YKR060W Subunit of U3-containing 90S preribosome complex physical 1 1 1 Affinity Capture-RNA
SDH2 YLL041C Iron-sulfur protein subunit of succinate dehydrogenase physical 1 1 1 Affinity Capture-RNA
SFG1 YOR315W Nuclear protein putative transcription factor physical 1 1 1 Affinity Capture-RNA
TIM12 YBR091C Essential protein of the inner mitochondrial membrane physical 1 1 1 Affinity Capture-RNA
SKI3 YPR189W Ski complex component and TPR protein physical 1 1 1 Affinity Capture-RNA
SOH1 YGL127C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
YIR018C-A YIR018C-A Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SMF3 YLR034C Putative divalent metal ion transporter involved in iron homeostasis physical 1 1 1 Affinity Capture-RNA
RPA12 YJR063W RNA polymerase I subunit A12.2 physical 1 1 1 Affinity Capture-RNA
UTP20 YBL004W Component of the small-subunit (SSU) processome physical 1 1 1 Affinity Capture-RNA
SPF1 YEL031W P-type ATPase, ion transporter of the ER membrane physical 1 1 1 Affinity Capture-RNA
UTP4 YDR324C Subunit of U3-containing 90S preribosome and SSU processome complexes physical 1 1 1 Affinity Capture-RNA
TRS65 YGR166W Component of transport protein particle (TRAPP) complex II physical 1 1 1 Affinity Capture-RNA
SOP4 YJL192C ER-membrane protein physical 1 1 1 Affinity Capture-RNA
YNR061C YNR061C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SQT1 YIR012W Specific assembly chaperone for ribosomal protein Rpl10p physical 1 1 1 Affinity Capture-RNA
SCH9 YHR205W AGC family protein kinase physical 1 1 1 Affinity Capture-RNA
SWP1 YMR149W Delta subunit of the oligosaccharyl transferase glycoprotein complex physical 1 1 1 Affinity Capture-RNA
YDL012C YDL012C Tail-anchored plasma membrane protein with a conserved CYSTM module physical 1 1 1 Affinity Capture-RNA
RTG2 YGL252C Sensor of mitochondrial dysfunction physical 1 1 1 Affinity Capture-RNA
RSN1 YMR266W Membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
YLF2 YHL014C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YBL081W YBL081W Non-essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
VPS9 YML097C Guanine nucleotide exchange factor (GEF) and ubiquitin receptor physical 1 1 1 Affinity Capture-RNA
YPR089W YPR089W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RRG9 YNL213C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RPB2 YOR151C RNA polymerase II second largest subunit B150 physical 1 1 1 Affinity Capture-RNA
SPC72 YAL047C Gamma-tubulin small complex (gamma-TuSC) receptor physical 1 1 1 Affinity Capture-RNA
TRM82 YDR165W Noncatalytic subunit of a tRNA methyltransferase complex physical 1 1 1 Affinity Capture-RNA
RSC30 YHR056C Component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
SND1 YDR186C Protein involved in SRP-independent targeting of substrates to the ER physical 1 1 1 Affinity Capture-RNA
SHE9 YDR393W Protein required for normal mitochondrial morphology physical 1 1 1 Affinity Capture-RNA
UGO1 YDR470C Outer membrane component of the mitochondrial fusion machinery physical 1 1 1 Affinity Capture-RNA
ZRT2 YLR130C Low-affinity zinc transporter of the plasma membrane physical 1 1 1 Affinity Capture-RNA
SIA1 YOR137C Protein of unassigned function physical 1 1 1 Affinity Capture-RNA
YGR283C YGR283C Putative methyltransferase physical 1 1 1 Affinity Capture-RNA
RPB8 YOR224C RNA polymerase subunit ABC14.5 physical 1 1 1 Affinity Capture-RNA
YCR102C YCR102C Putative quinone oxidoreductase physical 1 1 1 Affinity Capture-RNA
RAP1 YNL216W Essential DNA-binding transcription regulator that binds many loci physical 1 1 1 Affinity Capture-RNA
SWS2 YNL081C Putative mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
USV1 YPL230W Putative transcription factor containing a C2H2 zinc finger physical 1 1 1 Affinity Capture-RNA
UCC1 YLR224W F-box protein and component of SCF ubiquitin ligase complexes physical 1 1 1 Affinity Capture-RNA
SFP1 YLR403W Regulates transcription of ribosomal protein and biogenesis genes physical 1 1 1 Affinity Capture-RNA
ROM2 YLR371W Guanine nucleotide exchange factor (GEF) for Rho1p and Rho2p physical 1 1 1 Affinity Capture-RNA
SEF1 YBL066C Putative transcription factor physical 1 1 1 Affinity Capture-RNA
SOF1 YLL011W Protein required for biogenesis of 40S (small) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RAV2 YDR202C Subunit of RAVE complex (Rav1p, Rav2p, Skp1p) physical 1 1 1 Affinity Capture-RNA
RPB7 YDR404C RNA polymerase II subunit B16 physical 1 1 1 Affinity Capture-RNA
SKT5 YBL061C Activator of Chs3p (chitin synthase III) during vegetative growth physical 1 1 1 Affinity Capture-RNA
YGK1 YGL101W 5'-deoxynucleotidase physical 1 1 1 Affinity Capture-RNA
SKN1 YGR143W Protein involved in sphingolipid biosynthesis physical 1 1 1 Affinity Capture-RNA
SPE1 YKL184W Ornithine decarboxylase physical 1 1 1 Affinity Capture-RNA
YGR122W YGR122W Protein that may be involved in pH regulation physical 1 1 1 Affinity Capture-RNA
YDL241W YDL241W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RFC3 YNL290W Subunit of heteropentameric Replication factor C (RF-C) physical 1 1 1 Affinity Capture-RNA
RDS3 YPR094W Component of the SF3b subcomplex of the U2 snRNP physical 1 1 1 Affinity Capture-RNA
SEC2 YNL272C Guanyl-nucleotide exchange factor for the small G-protein Sec4p physical 1 1 1 Affinity Capture-RNA
SRP14 YDL092W Signal recognition particle (SRP) subunit physical 1 1 1 Affinity Capture-RNA
TAT1 YBR069C Amino acid transporter for valine, leucine, isoleucine, and tyrosine physical 1 1 1 Affinity Capture-RNA
STE7 YDL159W Signal transducing MAP kinase kinase physical 1 1 1 Affinity Capture-RNA
TOF2 YKR010C Protein required for rDNA silencing and mitotic rDNA condensation physical 1 1 1 Affinity Capture-RNA
RGD1 YBR260C GTPase-activating protein (RhoGAP) for Rho3p and Rho4p physical 1 1 1 Affinity Capture-RNA
RSC3 YDR303C Component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
YAH1 YPL252C Ferredoxin of the mitochondrial matrix physical 1 1 1 Affinity Capture-RNA
SAP185 YJL098W Protein that forms a complex with the Sit4p protein phosphatase physical 1 1 1 Affinity Capture-RNA
YGR237C YGR237C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
VPS55 YJR044C Late endosomal protein involved in late endosome to vacuole transport physical 1 1 1 Affinity Capture-RNA
SIT4 YDL047W Ceramide-activated, type 2A-related serine-threonine phosphatase physical 1 1 1 Affinity Capture-RNA
SHE3 YBR130C Protein adaptor between Myo4p and the She2p-mRNA complex physical 1 1 1 Affinity Capture-RNA
YNK1 YKL067W Nucleoside diphosphate kinase physical 1 1 1 Affinity Capture-RNA
VHS2 YIL135C Regulator of septin dynamics physical 1 1 1 Affinity Capture-RNA
TVS1 YCR061W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
VPS51 YKR020W Component of the GARP (Golgi-associated retrograde protein) complex physical 1 1 1 Affinity Capture-RNA
YGR111W YGR111W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SSF2 YDR312W Protein required for ribosomal large subunit maturation physical 1 1 1 Affinity Capture-RNA
WAR1 YML076C Homodimeric Zn2Cys6 zinc finger transcription factor physical 1 1 1 Affinity Capture-RNA
SFT2 YBL102W Tetra-spanning membrane protein found mostly in the late Golgi physical 1 1 1 Affinity Capture-RNA
YBL029W YBL029W Non-essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
SNF1 YDR477W AMP-activated S/T protein kinase physical 1 1 1 Affinity Capture-RNA
RGT2 YDL138W Plasma membrane high glucose sensor that regulates glucose transport physical 1 1 1 Affinity Capture-RNA
RIB7 YBR153W Diaminohydroxyphoshoribosylaminopyrimidine deaminase physical 1 1 1 Affinity Capture-RNA
SEC1 YDR164C Sm-like protein involved in docking and fusion of exocytic vesicles physical 1 1 1 Affinity Capture-RNA
RNH201 YNL072W Ribonuclease H2 catalytic subunit physical 1 1 1 Affinity Capture-RNA
RCF2 YNR018W Cytochrome c oxidase subunit physical 1 1 1 Affinity Capture-RNA
YHL008C YHL008C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SOL1 YNR034W Protein with a possible role in tRNA export physical 1 1 1 Affinity Capture-RNA
TSR3 YOR006C Protein required for 20S pre-rRNA processing physical 1 1 1 Affinity Capture-RNA
RPN14 YGL004C Evolutionarily conserved 19S regulatory particle assembly-chaperone physical 1 1 1 Affinity Capture-RNA
RET2 YFR051C Delta subunit of the coatomer complex (COPI) physical 1 1 1 Affinity Capture-RNA
RKR1 YMR247C RING domain E3 ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
RHO2 YNL090W Non-essential small GTPase of the Rho/Rac family of Ras-like proteins physical 1 1 1 Affinity Capture-RNA
ZRT3 YKL175W Vacuolar membrane zinc transporter physical 1 1 1 Affinity Capture-RNA
SLG1 YOR008C Sensor-transducer of the stress-activated PKC1-MPK1 kinase pathway physical 1 1 1 Affinity Capture-RNA
SEG1 YMR086W Component of eisosome required for proper eisosome assembly physical 1 1 1 Affinity Capture-RNA
RAD51 YER095W Strand exchange protein physical 1 1 1 Affinity Capture-RNA
YLL032C YLL032C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SBE2 YDR351W Protein required for bud growth physical 1 1 1 Affinity Capture-RNA
SPT15 YER148W TATA-binding protein (TBP) physical 1 1 1 Affinity Capture-RNA
YKL068W-A YKL068W-A Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YPL247C YPL247C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
STP1 YDR463W Transcription factor physical 1 1 1 Affinity Capture-RNA
YBR225W YBR225W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
UBP5 YER144C Putative ubiquitin-specific protease physical 1 1 1 Affinity Capture-RNA
YEA4 YEL004W Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter physical 1 1 1 Affinity Capture-RNA
TOH1 YJL171C GPI-anchored cell wall protein of unknown function physical 1 1 1 Affinity Capture-RNA
TMA46 YOR091W Protein of unknown function that associates with translating ribosomes physical 1 1 1 Affinity Capture-RNA
SSL2 YIL143C Component of RNA polymerase transcription factor TFIIH holoenzyme physical 1 1 1 Affinity Capture-RNA
QRI5 YLR204W Mitochondrial inner membrane protein physical 1 1 1 Affinity Capture-RNA
UBX4 YMR067C UBX domain-containing protein that interacts with Cdc48p physical 1 1 1 Affinity Capture-RNA
RRD1 YIL153W Peptidyl-prolyl cis/trans-isomerase physical 1 1 1 Affinity Capture-RNA
UBP7 YIL156W Ubiquitin-specific protease that cleaves ubiquitin-protein fusions physical 1 1 1 Affinity Capture-RNA
SVP26 YHR181W ER exit adaptor for Golgi mannosyltransferases physical 1 1 1 Affinity Capture-RNA
URB2 YJR041C Protein required for normal metabolism of the rRNA primary transcript physical 1 1 1 Affinity Capture-RNA
URK1 YNR012W Uridine/cytidine kinase physical 1 1 1 Affinity Capture-RNA
TPA1 YER049W Prolyl hydroxylase physical 1 1 1 Affinity Capture-RNA
UTP15 YMR093W Nucleolar protein physical 1 1 1 Affinity Capture-RNA
VPS33 YLR396C ATP-binding protein that is a subunit of the HOPS and CORVET complexes physical 1 1 1 Affinity Capture-RNA
RIM20 YOR275C Protein involved in proteolytic activation of Rim101p physical 1 1 1 Affinity Capture-RNA
TOS7 YOL019W Protein involved in secretion and cell wall organization physical 1 1 1 Affinity Capture-RNA
TBS1 YBR150C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YPR071W YPR071W Putative membrane protein physical 1 1 1 Affinity Capture-RNA
SWI6 YLR182W Transcription cofactor physical 1 1 1 Affinity Capture-RNA
PUT2 YHR037W Delta-1-pyrroline-5-carboxylate dehydrogenase physical 1 1 1 Affinity Capture-RNA
YMR181C YMR181C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SLM5 YCR024C Mitochondrial asparaginyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
YDR476C YDR476C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SEC6 YIL068C Essential 88kDa subunit of the exocyst complex physical 1 1 1 Affinity Capture-RNA
TDA11 YHR159W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SPC98 YNL126W Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex physical 1 1 1 Affinity Capture-RNA
RFC5 YBR087W Subunit of heteropentameric Replication factor C (RF-C) physical 1 1 1 Affinity Capture-RNA
SMF2 YHR050W Divalent metal ion transporter involved in manganese homeostasis physical 1 1 1 Affinity Capture-RNA
YPR097W YPR097W Protein that contains a PX domain and binds phosphoinositides physical 1 1 1 Affinity Capture-RNA
RHO4 YKR055W Non-essential small GTPase physical 1 1 1 Affinity Capture-RNA
YJL206C YJL206C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YCK3 YER123W Palmitoylated vacuolar membrane-localized casein kinase I isoform physical 1 1 1 Affinity Capture-RNA
PUT3 YKL015W Transcriptional activator physical 1 1 1 Affinity Capture-RNA
RGD2 YFL047W GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p physical 1 1 1 Affinity Capture-RNA
VIP1 YLR410W Bifunctional inositol pyrophosphate kinase and phosphatase physical 1 1 1 Affinity Capture-RNA
SLK19 YOR195W Kinetochore-associated protein physical 1 1 1 Affinity Capture-RNA
RDH54 YBR073W DNA-dependent ATPase physical 1 1 1 Affinity Capture-RNA
YOL013W-A YOL013W-A Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YOX1 YML027W Homeobox transcriptional repressor physical 1 1 1 Affinity Capture-RNA
SPT8 YLR055C Subunit of the SAGA transcriptional regulatory complex physical 1 1 1 Affinity Capture-RNA
REB1 YBR049C RNA polymerase I enhancer binding protein physical 1 1 1 Affinity Capture-RNA
REB1 YBR049C RNA polymerase I enhancer binding protein genetic 1 1 1 Positive Genetic
WHI3 YNL197C RNA binding protein that modulates mRNA stability physical 1 1 1 Affinity Capture-RNA
TRM112 YNR046W Protein involved in methylation of tRNA, rRNA, and translation factors physical 1 1 1 Affinity Capture-RNA
YLR126C YLR126C Putative glutamine amidotransferase physical 1 1 1 Affinity Capture-RNA
SCM3 YDL139C Nonhistone component of centromeric chromatin physical 1 1 1 Affinity Capture-RNA
TIM18 YOR297C Component of the mitochondrial TIM22 complex physical 1 1 1 Affinity Capture-RNA
VTS1 YOR359W Flap-structured DNA-binding and RNA-binding protein physical 1 1 1 Affinity Capture-RNA
URA3 YEL021W Orotidine-5'-phosphate (OMP) decarboxylase physical 1 1 1 Affinity Capture-RNA
TMA19 YKL056C Protein that associates with ribosomes physical 1 1 1 Affinity Capture-RNA
SPO24 YPR036W-A Small (67 amino acids) protein involved in sporulation physical 1 1 1 Affinity Capture-RNA
YOP1 YPR028W Reticulon-interacting protein physical 1 1 1 Affinity Capture-RNA
TOM6 YOR045W Component of the TOM (translocase of outer membrane) complex physical 1 1 1 Affinity Capture-RNA
RSM7 YJR113C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
SEC23 YPR181C GTPase-activating protein, stimulates the GTPase activity of Sar1p physical 1 1 1 Affinity Capture-RNA
SSD1 YDR293C Translational repressor physical 1 1 1 Affinity Capture-RNA
SSD1 YDR293C Translational repressor genetic 1 1 1 Negative Genetic
UTP6 YDR449C Nucleolar protein physical 1 1 1 Affinity Capture-RNA
TOM71 YHR117W Mitochondrial outer membrane protein physical 1 1 1 Affinity Capture-RNA
SER3 YER081W 3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase physical 1 1 1 Affinity Capture-RNA
RPA190 YOR341W RNA polymerase I largest subunit A190 physical 1 1 1 Affinity Capture-RNA
RRB1 YMR131C Specific assembly chaperone for ribosomal protein Rpl3p physical 1 1 1 Affinity Capture-RNA
TOA2 YKL058W TFIIA small subunit physical 1 1 1 Affinity Capture-RNA
YSP2 YDR326C Sterol-binding protein physical 1 1 1 Affinity Capture-RNA
SMX2 YFL017W-A Core Sm protein Sm G physical 1 1 1 Affinity Capture-RNA
YLR108C YLR108C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RAS1 YOR101W GTPase involved in G-protein signaling in adenylate cyclase activation physical 1 1 1 Affinity Capture-RNA
SDH8 YBR269C Protein required for assembly of succinate dehydrogenase physical 1 1 1 Affinity Capture-RNA
RSM22 YKL155C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
RSP5 YER125W NEDD4 family E3 ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
VNX1 YNL321W Calcium/H+ antiporter localized to the endoplasmic reticulum membrane physical 1 1 1 Affinity Capture-RNA
RAD18 YCR066W E3 ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
YOR192C-C YOR192C-C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YER053C-A YER053C-A Protein of unknown function physical 1 1 1 Affinity Capture-RNA
TMA16 YOR252W Protein of unknown function that associates with ribosomes physical 1 1 1 Affinity Capture-RNA
YLH47 YPR125W Mitochondrial inner membrane protein physical 1 1 1 Affinity Capture-RNA
VPS45 YGL095C Protein of the Sec1p/Munc-18 family physical 1 1 1 Affinity Capture-RNA
WSC3 YOL105C Sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway physical 1 1 1 Affinity Capture-RNA
REV7 YIL139C Accessory subunit of DNA polymerase zeta physical 1 1 1 Affinity Capture-RNA
WSC4 YHL028W Endoplasmic reticulum (ER) membrane protein physical 1 1 1 Affinity Capture-RNA
YGR035C YGR035C Putative protein of unknown function, potential Cdc28p substrate physical 1 1 1 Affinity Capture-RNA
UFD1 YGR048W Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase physical 1 1 1 Affinity Capture-RNA
YTM1 YOR272W Ribosomal assembly factor and 66S pre-ribosomal particle constituent physical 1 1 1 Affinity Capture-RNA
YAP5 YIR018W Basic leucine zipper (bZIP) iron-sensing transcription factor physical 1 1 1 Affinity Capture-RNA
RML2 YEL050C Mitochondrial ribosomal protein of the large subunit (L2) physical 1 1 1 Affinity Capture-RNA
RAD52 YML032C Protein involved in homologous recombination physical 1 1 1 Affinity Capture-RNA
UBC9 YDL064W SUMO-conjugating enzyme involved in the Smt3p conjugation pathway physical 1 1 1 Affinity Capture-RNA
YNL194C YNL194C Integral membrane protein physical 1 1 1 Affinity Capture-RNA
UIP3 YAR027W Putative integral membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
YHP1 YDR451C Homeobox transcriptional repressor physical 1 1 1 Affinity Capture-RNA
YLL053C YLL053C Putative protein physical 1 1 1 Affinity Capture-RNA
PWP2 YCR057C Conserved 90S pre-ribosomal component physical 1 1 1 Affinity Capture-RNA
RPM2 YML091C Protein subunit of mitochondrial RNase P physical 1 1 1 Affinity Capture-RNA
SKN7 YHR206W Nuclear response regulator and transcription factor physical 1 1 1 Affinity Capture-RNA
YDR210C-D YDR210C-D Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
YNL143C YNL143C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SHY1 YGR112W Mitochondrial inner membrane protein required for complex IV assembly physical 1 1 1 Affinity Capture-RNA
SSK1 YLR006C Cytoplasmic phosphorelay intermediate osmosensor and regulator physical 1 1 1 Affinity Capture-RNA
SAN1 YDR143C Ubiquitin-protein ligase physical 1 1 1 Affinity Capture-RNA
RRP12 YPL012W Protein required for export of the ribosomal subunits physical 1 1 1 Affinity Capture-RNA
YML045W YML045W Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
TRM2 YKR056W tRNA methyltransferase physical 1 1 1 Affinity Capture-RNA
RVB1 YDR190C ATP-dependent DNA helicase, also known as pontin physical 1 1 1 Affinity Capture-MS
YPK1 YKL126W S/T protein kinase physical 1 1 1 Biochemical Activity
RMP1 YLR145W Subunit of RNase MRP genetic 1 1 1 Positive Genetic
SHE2 YKL130C RNA-binding protein that binds specific mRNAs and interacts with She3p genetic 1 1 1 Phenotypic Enhancement
TUB4 YLR212C Gamma-tubulin genetic 1 1 1 Synthetic Growth Defect
SGS1 YMR190C RecQ family nucleolar DNA helicase genetic 1 1 1 Positive Genetic
DIA1 YMR316W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MSK1 YNL073W Mitochondrial lysine-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
DOT5 YIL010W Nuclear thiol peroxidase physical 1 1 1 Affinity Capture-RNA
CYC1 YJR048W Cytochrome c, isoform 1 physical 1 1 1 Affinity Capture-RNA
NCR1 YPL006W Vacuolar membrane protein involved with Npc2p in sterol trafficking physical 1 1 1 Affinity Capture-RNA
COX10 YPL172C Heme A:farnesyltransferase physical 1 1 1 Affinity Capture-RNA
NRM1 YNR009W Transcriptional co-repressor of MBF-regulated gene expression physical 1 1 1 Affinity Capture-RNA
GPI19 YDR437W Subunit of GPI-GlcNAc transferase involved in synthesis of GlcNAc-PI physical 1 1 1 Affinity Capture-RNA
MRPL49 YJL096W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MNN5 YJL186W Alpha-1,2-mannosyltransferase physical 1 1 1 Affinity Capture-RNA
CDC50 YCR094W Endosomal protein that interacts with phospholipid flippase Drs2p genetic 1 1 1 Negative Genetic
GIS1 YDR096W Histone demethylase and transcription factor physical 1 1 1 Affinity Capture-RNA
GUT2 YIL155C Mitochondrial glycerol-3-phosphate dehydrogenase physical 1 1 1 Affinity Capture-RNA
ALO1 YML086C D-Arabinono-1,4-lactone oxidase physical 1 1 1 Affinity Capture-RNA
PEX3 YDR329C Peroxisomal membrane protein (PMP) physical 1 1 1 Affinity Capture-RNA
OSH6 YKR003W Oxysterol-binding phosphatidylserine transferase physical 1 1 1 Affinity Capture-RNA
COX11 YPL132W Protein required for delivery of copper to Cox1p physical 1 1 1 Affinity Capture-RNA
FMP45 YDL222C Integral membrane protein localized to mitochondria physical 1 1 1 Affinity Capture-RNA
HEM2 YGL040C Aminolevulinate dehydratase physical 1 1 1 Affinity Capture-RNA
ECL1 YGR146C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PEX31 YGR004W Peroxisomal integral membrane protein physical 1 1 1 Affinity Capture-RNA
CRH1 YGR189C Chitin transglycosylase physical 1 1 1 Affinity Capture-RNA
PHD1 YKL043W Transcriptional activator that enhances pseudohyphal growth physical 1 1 1 Affinity Capture-RNA
CYC2 YOR037W Mitochondrial peripheral inner membrane protein physical 1 1 1 Affinity Capture-RNA
PSR2 YLR019W Putative plasma membrane phosphatase physical 1 1 1 Affinity Capture-RNA
CHS2 YBR038W Chitin synthase II physical 1 1 1 Affinity Capture-RNA
EAR1 YMR171C Specificity factor required for Rsp5p-dependent ubiquitination physical 1 1 1 Affinity Capture-RNA
MDM34 YGL219C Mitochondrial component of the ERMES complex physical 1 1 1 Affinity Capture-RNA
MPS3 YJL019W Nuclear envelope protein physical 1 1 1 Affinity Capture-MS
NPR1 YNL183C Protein kinase physical 1 1 1 Affinity Capture-RNA
NCB2 YDR397C Subunit of a heterodimeric NC2 transcription regulator complex physical 1 1 1 Affinity Capture-RNA
HXT2 YMR011W High-affinity glucose transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
HXT3 YDR345C Low affinity glucose transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
FRE1 YLR214W Ferric reductase and cupric reductase physical 1 1 1 Affinity Capture-RNA
PTR2 YKR093W Integral membrane peptide transporter physical 1 1 1 Affinity Capture-RNA
HXT4 YHR092C High-affinity glucose transporter physical 1 1 1 Affinity Capture-RNA
PHO8 YDR481C Repressible vacuolar alkaline phosphatase physical 1 1 1 Affinity Capture-RNA
ECM13 YBL043W Non-essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
CIS3 YJL158C Mannose-containing glycoprotein constituent of the cell wall physical 1 1 1 Affinity Capture-RNA
MUP1 YGR055W High affinity methionine permease physical 1 1 1 Affinity Capture-RNA
HSP30 YCR021C Negative regulator of the H(+)-ATPase Pma1p physical 1 1 1 Affinity Capture-RNA
GOT1 YMR292W Homodimeric protein that is packaged into COPII vesicles physical 1 1 1 Affinity Capture-RNA
BAP2 YBR068C High-affinity leucine permease physical 1 1 1 Affinity Capture-RNA
FCY2 YER056C Purine-cytosine permease physical 1 1 1 Affinity Capture-RNA
ERP4 YOR016C Member of the p24 family involved in ER to Golgi transport physical 1 1 1 Affinity Capture-RNA
MDM32 YOR147W Mitochondrial inner membrane protein with similarity to Mdm31p physical 1 1 1 Affinity Capture-RNA
CPR4 YCR069W Peptidyl-prolyl cis-trans isomerase (cyclophilin) physical 1 1 1 Affinity Capture-RNA
ERS1 YCR075C Protein involved in cystine transport physical 1 1 1 Affinity Capture-RNA
COX7 YMR256C Subunit VII of cytochrome c oxidase (Complex IV) physical 1 1 1 Affinity Capture-RNA
MRL1 YPR079W Membrane protein physical 1 1 1 Affinity Capture-RNA
MSC3 YLR219W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
CHO2 YGR157W Phosphatidylethanolamine methyltransferase (PEMT) physical 1 1 1 Affinity Capture-RNA
EFR3 YMR212C Protein required for Stt4-containing PI kinase complex localization physical 1 1 1 Affinity Capture-RNA
MRX6 YNL295W Mitochondrial ribosome-associated protein physical 1 1 1 Affinity Capture-RNA
FAA3 YIL009W Long chain fatty acyl-CoA synthetase physical 1 1 1 Affinity Capture-RNA
ALG12 YNR030W Alpha-1,6-mannosyltransferase localized to the ER physical 1 1 1 Affinity Capture-RNA
OAC1 YKL120W Mitochondrial inner membrane transporter physical 1 1 1 Affinity Capture-RNA
CCW12 YLR110C Cell wall mannoprotein physical 1 1 1 Affinity Capture-RNA
MOT3 YMR070W Transcriptional repressor, activator physical 1 1 1 Affinity Capture-RNA
KRE1 YNL322C Cell wall glycoprotein involved in beta-glucan assembly physical 1 1 1 Affinity Capture-RNA
COA2 YPL189C-A Cytochrome oxidase assembly factor physical 1 1 1 Affinity Capture-RNA
CDS1 YBR029C Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase) physical 1 1 1 Affinity Capture-RNA
MRN1 YPL184C RNA-binding protein that may be involved in translational regulation physical 1 1 1 Affinity Capture-RNA
MSN1 YOL116W Transcriptional activator physical 1 1 1 Affinity Capture-RNA
MRX12 YJR003C Protein that associates with mitochondrial ribosome physical 1 1 1 Affinity Capture-RNA
GPI14 YJR013W Glycosylphosphatidylinositol-alpha 1,4 mannosyltransferase I physical 1 1 1 Affinity Capture-RNA
DSE2 YHR143W Daughter cell-specific secreted protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
CCW14 YLR390W-A Covalently linked cell wall glycoprotein physical 1 1 1 Affinity Capture-RNA
AGA2 YGL032C Adhesion subunit of a-agglutinin of a-cells physical 1 1 1 Affinity Capture-RNA
CTS1 YLR286C Endochitinase physical 1 1 1 Affinity Capture-RNA
AGA1 YNR044W Anchorage subunit of a-agglutinin of a-cells physical 1 1 1 Affinity Capture-RNA
FIT3 YOR383C Mannoprotein that is incorporated into the cell wall physical 1 1 1 Affinity Capture-RNA
FLC3 YGL139W Putative FAD transporter, similar to Flc1p and Flc2p physical 1 1 1 Affinity Capture-RNA
FEX1 YOR390W Protein involved in fluoride export physical 1 1 1 Affinity Capture-RNA
FEX2 YPL279C Protein involved in fluoride export physical 1 1 1 Affinity Capture-RNA
ELO1 YJL196C Elongase I, medium-chain acyl elongase physical 1 1 1 Affinity Capture-RNA
FSF1 YOR271C Putative protein physical 1 1 1 Affinity Capture-RNA
COX12 YLR038C Subunit VIb of cytochrome c oxidase physical 1 1 1 Affinity Capture-RNA
MRS4 YKR052C Iron transporter of the mitochondrial carrier family physical 1 1 1 Affinity Capture-RNA
NCW1 YMR122W-A Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MTL1 YGR023W Putative plasma membrane sensor physical 1 1 1 Affinity Capture-RNA
NDD1 YOR372C Transcriptional activator essential for nuclear division physical 1 1 1 Affinity Capture-RNA
OPT1 YJL212C Proton-coupled oligopeptide transporter of the plasma membrane physical 1 1 1 Affinity Capture-RNA
MPC3 YGR243W Highly conserved subunit of the mitochondrial pyruvate carrier (MPC) physical 1 1 1 Affinity Capture-RNA
APT2 YDR441C Potential adenine phosphoribosyltransferase physical 1 1 1 Affinity Capture-RNA
MUP3 YHL036W Low affinity methionine permease physical 1 1 1 Affinity Capture-RNA
MTO1 YGL236C Mitochondrial protein physical 1 1 1 Affinity Capture-RNA
PIR1 YKL164C O-glycosylated protein required for cell wall stability physical 1 1 1 Affinity Capture-RNA
IFM1 YOL023W Mitochondrial translation initiation factor 2 physical 1 1 1 Affinity Capture-RNA
PCA1 YBR295W Cadmium transporting P-type ATPase physical 1 1 1 Affinity Capture-RNA
CCC2 YDR270W Cu(+2)-transporting P-type ATPase physical 1 1 1 Affinity Capture-RNA
ATP8 Q0080 Subunit 8 of the F0 sector of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
MRX14 YDR115W Putative mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MDM35 YKL053C-A Mitochondrial intermembrane space protein physical 1 1 1 Affinity Capture-RNA
MRPL31 YKL138C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MIC12 YBR262C Component of the MICOS complex physical 1 1 1 Affinity Capture-RNA
MHF2 YDL160C-A Component of the heterotetrameric MHF histone-fold complex physical 1 1 1 Affinity Capture-RNA
MIX23 YBL107C Mitochondrial intermembrane space protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRK1 YDL079C Glycogen synthase kinase 3 (GSK-3) homolog physical 1 1 1 Affinity Capture-RNA
KSH1 YNL024C-A Essential protein suggested to function early in the secretory pathway physical 1 1 1 Affinity Capture-RNA
MCP1 YOR228C Mitochondrial protein of unknown function involved in lipid homeostas physical 1 1 1 Affinity Capture-RNA
ATG40 YOR152C Autophagy receptor with a role in endoplasmic reticulum degradation physical 1 1 1 Affinity Capture-RNA
GLD1 YPR109W Component of Dsc E3 ligase complex in Golgi and endosomes physical 1 1 1 Affinity Capture-RNA
MDL2 YPL270W Mitochondrial inner membrane half-type ABC transporter physical 1 1 1 Affinity Capture-RNA
CYT2 YKL087C Cytochrome c1 heme lyase physical 1 1 1 Affinity Capture-RNA
MCH4 YOL119C Protein with similarity to mammalian monocarboxylate permeases physical 1 1 1 Affinity Capture-RNA
DPI8 YJL133C-A Putative mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
AGC1 YPR021C Mitochondrial amino acid transporter physical 1 1 1 Affinity Capture-RNA
HEL1 YKR017C RING finger ubiquitin ligase (E3) physical 1 1 1 Affinity Capture-RNA
MST1 YKL194C Mitochondrial threonyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
MIM2 YLR099W-A Mitochondrial protein required for outer membrane protein import physical 1 1 1 Affinity Capture-RNA
LPX1 YOR084W Peroxisomal matrix-localized lipase physical 1 1 1 Affinity Capture-RNA
MRPL37 YBR268W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
HEM3 YDL205C Porphobilinogen deaminase physical 1 1 1 Affinity Capture-RNA
BER1 YLR412W Protein involved in microtubule-related processes physical 1 1 1 Affinity Capture-RNA
FMP30 YPL103C Protein with a role in maintaining mitochondrial morphology physical 1 1 1 Affinity Capture-RNA
ENB1 YOL158C Ferric enterobactin transmembrane transporter physical 1 1 1 Affinity Capture-RNA
NMA111 YNL123W Serine protease and general molecular chaperone physical 1 1 1 Affinity Capture-RNA
ATG22 YCL038C Vacuolar integral membrane protein required for efflux of amino acids physical 1 1 1 Affinity Capture-RNA
PMP3 YDR276C Small plasma membrane protein physical 1 1 1 Affinity Capture-RNA
FEN2 YCR028C Plasma membrane H+-pantothenate symporter physical 1 1 1 Affinity Capture-RNA
ATO3 YDR384C Plasma membrane protein, putative ammonium transporter physical 1 1 1 Affinity Capture-RNA
NHX1 YDR456W Na+/H+ and K+/H+ exchanger physical 1 1 1 Affinity Capture-RNA
PHO5 YBR093C Repressible acid phosphatase physical 1 1 1 Affinity Capture-RNA
PPN2 YNL217W Zn2+-dependent endopolyphosphatase physical 1 1 1 Affinity Capture-RNA
COA6 YMR244C-A Protein involved in cytochrome c oxidase (Complex IV) assembly physical 1 1 1 Affinity Capture-RNA
ECT1 YGR007W Ethanolamine-phosphate cytidylyltransferase physical 1 1 1 Affinity Capture-RNA
CIS1 YLR346C Protein of unknown function found in mitochondria physical 1 1 1 Affinity Capture-RNA
EFM2 YBR271W S-adenosylmethionine-dependent methyltransferase physical 1 1 1 Affinity Capture-RNA
MRX19 YDL183C Protein that may form an active mitochondrial KHE system physical 1 1 1 Affinity Capture-RNA
PDR16 YNL231C Phosphatidylinositol transfer protein (PITP) physical 1 1 1 Affinity Capture-RNA
BI2 Q0110 Mitochondrial mRNA maturase with a role in splicing physical 1 1 1 Affinity Capture-RNA
NPC2 YDL046W Sterol transport protein and functional homolog of human NPC2/He1 physical 1 1 1 Affinity Capture-RNA
MFA1 YDR461W Mating pheromone a-factor physical 1 1 1 Affinity Capture-RNA
ORT1 YOR130C Ornithine transporter of the mitochondrial inner membrane physical 1 1 1 Affinity Capture-RNA
EAT1 YGR015C Ethanol acetyltransferase physical 1 1 1 Affinity Capture-RNA
NAR1 YNL240C Subunit of the cytosolic iron-sulfur (FeS) protein assembly machinery physical 1 1 1 Affinity Capture-RNA
NDI1 YML120C NADH:ubiquinone oxidoreductase physical 1 1 1 Affinity Capture-RNA
ECM14 YHR132C Conserved fungal protein with similarity to zinc carboxypeptidases genetic 1 1 1 Negative Genetic
ATP23 YNR020C Putative metalloprotease of the mitochondrial inner membrane physical 1 1 1 Affinity Capture-RNA
ICE2 YIL090W Integral ER membrane protein with type-III transmembrane domains physical 1 1 1 Affinity Capture-RNA
LRE1 YCL051W Protein involved in control of cell wall structure and stress response physical 1 1 1 Affinity Capture-RNA
PET117 YER058W Assembly factor that couples heme a synthesis to complex IV assembly physical 1 1 1 Affinity Capture-RNA
NCE101 YJL205C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MSC6 YOR354C Multicopy suppressor of HER2 involved in mitochondrial translation physical 1 1 1 Affinity Capture-RNA
PDE2 YOR360C High-affinity cyclic AMP phosphodiesterase physical 1 1 1 Affinity Capture-RNA
PPM1 YDR435C Carboxyl methyltransferase physical 1 1 1 Affinity Capture-RNA
CTM1 YHR109W Cytochrome c lysine methyltransferase physical 1 1 1 Affinity Capture-RNA
PHM6 YDR281C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
AAT1 YKL106W Mitochondrial aspartate aminotransferase physical 1 1 1 Affinity Capture-RNA
HEM4 YOR278W Uroporphyrinogen III synthase physical 1 1 1 Affinity Capture-RNA
MRX15 YNR040W Membrane-associated mitoribosome receptor physical 1 1 1 Affinity Capture-RNA
MSY1 YPL097W Mitochondrial tyrosyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
PDH1 YPR002W Putative 2-methylcitrate dehydratase physical 1 1 1 Affinity Capture-RNA
PLB2 YMR006C Phospholipase B (lysophospholipase) involved in lipid metabolism physical 1 1 1 Affinity Capture-RNA
MNC1 YBR056W-A Putative membrane protein upregulated in toxic manganese levels physical 1 1 1 Affinity Capture-RNA
PRM5 YIL117C Pheromone-regulated protein, predicted to have 1 transmembrane segment physical 1 1 1 Affinity Capture-RNA
APQ12 YIL040W Nuclear envelope/ER integral membrane protein physical 1 1 1 Affinity Capture-RNA
NPP1 YCR026C Nucleotide pyrophosphatase/phosphodiesterase physical 1 1 1 Affinity Capture-RNA
IZH1 YDR492W Membrane protein involved in zinc ion homeostasis physical 1 1 1 Affinity Capture-RNA
PHM7 YOL084W Protein of unknown function physical 1 1 1 Affinity Capture-RNA