Standard name Systematic name Name description Description
HEK2 YBL032W RNA binding protein involved in asymmetric localization of ASH1 mRNA RNA binding protein involved in asymmetric localization of ASH1 mRNA; represses translation of ASH1 mRNA, an effect reversed by Yck1p-dependent phosphoryation; regulates telomere position effect and length; similarity to hnRNP-K
Visualize the interactome of HEK2
Links to external databases:
  SGD   |   KEGG   |  

Cell cycle phase and timing of transcription peak

Cell cycle phase Time (min)
S 72

CYCLoPs localization & abundance

WT1 WT2 WT3
Cytoplasm NaN NaN 0.729
ER NaN NaN 0.170
Golgi NaN NaN 0.087

GFP localization & abundance

GFP localization GFP abundance
cytoplasm 15600

GO term count

Metabolism Cell cycle Cell division Signal transduction DNA replication
HEK2 4 0 0 0 0

List of interactors

Use the search utility to find the interactor you are looking for. By clicking the column headers the table will be sorted on that column. Use shift+click to sort on multiple columns. Default sorting is on number of experiments, number of unique methods and the number of publications, and alphabetical on standard name, in that order.
Standard name Systematic name Name description Type #Experiments #Methods #Publications Evidence
ROM2 YLR371W Guanine nucleotide exchange factor (GEF) for Rho1p and Rho2p genetic 6 3 4 Negative Genetic, Dosage Rescue, Synthetic Lethality, Dosage Rescue, Negative Genetic, Negative Genetic
CCR4 YAL021C Component of the CCR4-NOT transcriptional complex genetic 6 3 3 Synthetic Growth Defect, Synthetic Growth Defect, Synthetic Lethality, Synthetic Growth Defect, Synthetic Growth Defect, Phenotypic Enhancement
ASH1 YKL185W Component of the Rpd3L histone deacetylase complex physical 5 2 4 Affinity Capture-RNA, Protein-RNA, Protein-RNA, Protein-RNA, Affinity Capture-RNA
FKH2 YNL068C Forkhead family transcription factor regulation 4 3 4 chromatin immunoprecipitation-chip evidence, chromatin immunoprecipitation-chip evidence, chromatin immunoprecipitation- exonuclease evidence, ChEC-Seq experiments
FKH1 YIL131C Forkhead family transcription factor regulation 3 3 3 chromatin immunoprecipitation-chip evidence, chromatin immunoprecipitation- exonuclease evidence, ChEC-Seq experiments
TIF4632 YGL049C Translation initiation factor eIF4G and scaffold protein physical 3 2 3 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-RNA
YMR310C YMR310C Putative methyltransferase physical 3 2 3 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-RNA
YCK1 YHR135C Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform physical 3 2 3 Biochemical Activity, Biochemical Activity, Affinity Capture-RNA
POP2 YNR052C Subunit of Ccr4-Not complex that mediates 3' to 5' mRNA deadenylation genetic 3 1 3 Synthetic Growth Defect, Synthetic Growth Defect, Synthetic Growth Defect
MID2 YLR332W O-glycosylated plasma membrane protein physical 3 2 2 Affinity Capture-RNA, Protein-RNA, Affinity Capture-RNA
CSM1 YCR086W Nucleolar protein that mediates homolog segregation during meiosis I genetic 3 1 2 Positive Genetic, Positive Genetic, Positive Genetic
RPS11A YDR025W Protein component of the small (40S) ribosomal subunit physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
SCP160 YJL080C Essential RNA-binding G protein effector of mating response pathway physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
PUB1 YNL016W Poly (A)+ RNA-binding protein physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
TMA108 YIL137C Ribosome-associated, nascent chain binding factor physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
MLP2 YIL149C Myosin-like protein associated with the nuclear envelope physical 2 2 2 Affinity Capture-MS, Affinity Capture-Western
MYO4 YAL029C Type V myosin motor involved in actin-based transport of cargos genetic 2 2 2 Dosage Rescue, Phenotypic Enhancement
YAP1 YML007W Basic leucine zipper (bZIP) transcription factor regulation 2 1 2 chromatin immunoprecipitation-chip evidence, chromatin immunoprecipitation-chip evidence
CBF5 YLR175W Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs physical 2 1 2 Affinity Capture-MS, Affinity Capture-MS
CDC33 YOL139C Translation initiation factor eIF4E physical 2 1 2 Affinity Capture-MS, Affinity Capture-MS
DHH1 YDL160C Cytoplasmic DEAD-box helicase and mRNA decapping activator physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
DBP2 YNL112W ATP-dependent RNA helicase of the DEAD-box protein family physical 2 1 2 Affinity Capture-MS, Affinity Capture-MS
MIS1 YBR084W Mitochondrial C1-tetrahydrofolate synthase physical 2 1 2 Affinity Capture-MS, Affinity Capture-MS
MRP7 YNL005C Mitochondrial ribosomal protein of the large subunit physical 2 1 2 Affinity Capture-MS, Affinity Capture-MS
STM1 YLR150W Protein required for optimal translation under nutrient stress physical 2 1 2 Affinity Capture-MS, Affinity Capture-MS
SUI3 YPL237W Beta subunit of the translation initiation factor eIF2 physical 2 1 2 Affinity Capture-MS, Affinity Capture-MS
NAB6 YML117W Putative RNA-binding protein physical 2 1 2 Affinity Capture-MS, Affinity Capture-MS
SLG1 YOR008C Sensor-transducer of the stress-activated PKC1-MPK1 kinase pathway physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
PRY3 YJL078C GPI-anchored cell wall protein involved in export of sterols physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
NAB2 YGL122C Nuclear polyadenylated RNA-binding protein physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
NUP116 YMR047C FG-nucleoporin component of central core of the nuclear pore complex physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
MSB2 YGR014W Mucin family member involved in various signaling pathways physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
NSP1 YJL041W FG-nucleoporin component of central core of the nuclear pore complex physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
NUP100 YKL068W FG-nucleoporin component of central core of the nuclear pore complex physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
NUP1 YOR098C FG-nucleoporin component of central core of the nuclear pore complex physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
POM34 YLR018C Subunit of the transmembrane ring of the nuclear pore complex (NPC) physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
ASM4 YDL088C FG-nucleoporin component of central core of nuclear pore complex (NPC) physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
CCW14 YLR390W-A Covalently linked cell wall glycoprotein physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
AGA1 YNR044W Anchorage subunit of a-agglutinin of a-cells physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
MTL1 YGR023W Putative plasma membrane sensor physical 2 2 1 Affinity Capture-RNA, Protein-RNA
GLC7 YER133W Type 1 S/T protein phosphatase (PP1) catalytic subunit genetic 2 1 1 Synthetic Growth Defect, Synthetic Growth Defect
ESA1 YOR244W Catalytic subunit of the histone acetyltransferase complex (NuA4) genetic 2 1 1 Synthetic Growth Defect, Synthetic Growth Defect
VTC1 YER072W Regulatory subunit of the vacuolar transporter chaperone (VTC) complex genetic 2 1 1 Negative Genetic, Negative Genetic
HOS1 YPR068C Class I histone deacetylase (HDAC) family member genetic 2 1 1 Dosage Lethality, Dosage Lethality
SFP1 YLR403W Regulates transcription of ribosomal protein and biogenesis genes regulation 1 1 1 DNA to cDNA expression microarray evidence
GCR1 YPL075W Transcriptional activator of genes involved in glycolysis regulation 1 1 1 DNA to cDNA expression microarray evidence
HFI1 YPL254W Adaptor protein required for structural integrity of the SAGA complex regulation 1 1 1 chromatin immunoprecipitation-chip evidence
MED2 YDL005C Subunit of the RNA polymerase II mediator complex regulation 1 1 1 chromatin immunoprecipitation-chip evidence
SPT20 YOL148C Subunit of the SAGA transcriptional regulatory complex regulation 1 1 1 DNA to cDNA expression microarray evidence
BUR6 YER159C Subunit of a heterodimeric NC2 transcription regulator complex regulation 1 1 1 chromatin immunoprecipitation-chip evidence
RAP1 YNL216W Essential DNA-binding transcription regulator that binds many loci regulation 1 1 1 DNA to cDNA expression microarray evidence
STP1 YDR463W Transcription factor regulation 1 1 1 chromatin immunoprecipitation-chip evidence
SIN4 YNL236W Subunit of the RNA polymerase II mediator complex regulation 1 1 1 DNA to cDNA expression microarray evidence
HSF1 YGL073W Trimeric heat shock transcription factor regulation 1 1 1 DNA to cDNA expression microarray evidence
MED4 YOR174W Subunit of the RNA polymerase II mediator complex regulation 1 1 1 chromatin immunoprecipitation-chip evidence
CST6 YIL036W Basic leucine zipper (bZIP) transcription factor from ATF/CREB family regulation 1 1 1 DNA to cDNA expression microarray evidence
TUP1 YCR084C General repressor of transcription in complex with Cyc8p regulation 1 1 1 DNA to cDNA expression microarray evidence
CLF1 YLR117C Member of the NineTeen Complex (NTC) physical 1 1 1 Affinity Capture-RNA
CHL4 YDR254W Outer kinetochore protein required for chromosome stability physical 1 1 1 Affinity Capture-RNA
DSN1 YIR010W Essential component of the outer kinetochore MIND complex physical 1 1 1 Affinity Capture-RNA
GWT1 YJL091C Protein involved in the inositol acylation of GlcN-PI physical 1 1 1 Affinity Capture-RNA
CAB3 YKL088W Subunit of PPCDC and CoA-SPC complexes involved in CoA biosynthesis physical 1 1 1 Affinity Capture-RNA
AXL2 YIL140W Integral plasma membrane protein physical 1 1 1 Affinity Capture-RNA
BRR2 YER172C RNA-dependent ATPase RNA helicase (DEIH box) physical 1 1 1 Affinity Capture-RNA
CWC23 YGL128C Component of a complex containing Cef1p physical 1 1 1 Affinity Capture-RNA
FRT2 YAL028W Tail-anchored ER membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
ARC1 YGL105W Protein that binds tRNA and methionyl- and glutamyl-tRNA synthetases physical 1 1 1 Affinity Capture-MS
GUS1 YGL245W Glutamyl-tRNA synthetase (GluRS) physical 1 1 1 Affinity Capture-MS
CBC2 YPL178W Small subunit of the heterodimeric cap binding complex with Sto1p physical 1 1 1 Affinity Capture-Western
GCD1 YOR260W Gamma subunit of the translation initiation factor eIF2B physical 1 1 1 Affinity Capture-RNA
CCR4 YAL021C Component of the CCR4-NOT transcriptional complex physical 1 1 1 Affinity Capture-RNA
APC2 YLR127C Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) physical 1 1 1 Affinity Capture-RNA
ARC35 YNR035C Subunit of the ARP2/3 complex physical 1 1 1 Affinity Capture-RNA
BAT1 YHR208W Mitochondrial branched-chain amino acid (BCAA) aminotransferase physical 1 1 1 Affinity Capture-RNA
BMH2 YDR099W 14-3-3 protein, minor isoform physical 1 1 1 Affinity Capture-RNA
ASC1 YMR116C G-protein beta subunit and guanine dissociation inhibitor for Gpa2p physical 1 1 1 Proximity Label-MS
CAF40 YNL288W Component of the CCR4-NOT transcriptional complex physical 1 1 1 Affinity Capture-RNA
CDC24 YAL041W Guanine nucleotide exchange factor (GEF) for Cdc42p physical 1 1 1 Affinity Capture-RNA
CDC11 YJR076C Component of the septin ring that is required for cytokinesis genetic 1 1 1 Negative Genetic
CDC3 YLR314C Component of the septin ring that is required for cytokinesis genetic 1 1 1 Negative Genetic
BUD31 YCR063W Component of the SF3b subcomplex of the U2 snRNP physical 1 1 1 Affinity Capture-RNA
CKS1 YBR135W Cyclin-dependent protein kinase regulatory subunit and adaptor physical 1 1 1 Affinity Capture-RNA
CIP1 YPL014W Cyclin-dependent kinase inhibitor physical 1 1 1 Affinity Capture-RNA
CPR1 YDR155C Cytoplasmic peptidyl-prolyl cis-trans isomerase (cyclophilin) physical 1 1 1 Affinity Capture-RNA
DCP1 YOL149W Subunit of the Dcp1p-Dcp2p decapping enzyme complex genetic 1 1 1 Phenotypic Suppression
DCP2 YNL118C Catalytic subunit of Dcp1p-Dcp2p decapping enzyme complex genetic 1 1 1 Phenotypic Suppression
EDE1 YBL047C Scaffold protein involved in the formation of early endocytic sites physical 1 1 1 Affinity Capture-RNA
EMG1 YLR186W Methyltransferase for rRNA physical 1 1 1 Affinity Capture-RNA
EAF3 YPR023C Component of the Rpd3S histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
EPL1 YFL024C Subunit of NuA4, an essential histone H4/H2A acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
FIP1 YJR093C Subunit of cleavage polyadenylation factor (CPF) physical 1 1 1 Affinity Capture-RNA
HAP2 YGL237C Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex physical 1 1 1 Affinity Capture-RNA
HAT2 YEL056W Subunit of the Hat1p-Hat2p histone acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
GLY1 YEL046C Threonine aldolase physical 1 1 1 Affinity Capture-RNA
DHH1 YDL160C Cytoplasmic DEAD-box helicase and mRNA decapping activator genetic 1 1 1 Dosage Rescue
AEP1 YMR064W Protein required for expression of the mitochondrial OLI1 gene physical 1 1 1 Affinity Capture-RNA
DIB1 YPR082C 17-kDa component of the U4/U6aU5 tri-snRNP physical 1 1 1 Affinity Capture-RNA
CSE2 YNR010W Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
GAL11 YOL051W Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
COG3 YER157W Essential component of the conserved oligomeric Golgi complex genetic 1 1 1 Negative Genetic
CCM1 YGR150C Mitochondrial 15S rRNA-binding protein physical 1 1 1 Affinity Capture-RNA
CMR1 YDL156W Nuclear protein with role in transcription, protein quality control physical 1 1 1 Affinity Capture-MS
APM1 YPL259C Mu1-like medium subunit of the AP-1 complex physical 1 1 1 Affinity Capture-MS
DOA4 YDR069C Ubiquitin hydrolase physical 1 1 1 Affinity Capture-RNA
DIG1 YPL049C MAP kinase-responsive inhibitor of the Ste12p transcription factor physical 1 1 1 Affinity Capture-RNA
BUD21 YOR078W Component of small ribosomal subunit (SSU) processosome physical 1 1 1 Affinity Capture-RNA
GPT2 YKR067W Glycerol-3-phosphate/dihydroxyacetone phosphate sn-1 acyltransferase physical 1 1 1 Affinity Capture-RNA
ANP1 YEL036C Subunit of the alpha-1,6 mannosyltransferase complex physical 1 1 1 Affinity Capture-RNA
CDC25 YLR310C Membrane bound guanine nucleotide exchange factor physical 1 1 1 Affinity Capture-RNA
AVT4 YNL101W Vacuolar transporter physical 1 1 1 Affinity Capture-RNA
ECM25 YJL201W Endocytic site protein required for stress-induced cell elongation physical 1 1 1 Affinity Capture-RNA
BSP1 YPR171W Adapter that links synaptojanins to the cortical actin cytoskeleton physical 1 1 1 Affinity Capture-RNA
GCN5 YGR252W Catalytic subunit of ADA and SAGA histone acetyltransferase complexes genetic 1 1 1 Positive Genetic
BET5 YML077W Core component of transport protein particle (TRAPP) complexes I-III genetic 1 1 1 Negative Genetic
BCK1 YJL095W MAPKKK acting in the protein kinase C signaling pathway physical 1 1 1 Affinity Capture-RNA
ECM30 YLR436C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
FDH1 YOR388C NAD(+)-dependent formate dehydrogenase physical 1 1 1 Affinity Capture-RNA
FUN19 YAL034C Non-essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
FLC2 YAL053W Putative calcium channel involved in calcium release under hypotonic physical 1 1 1 Affinity Capture-RNA
HHF2 YNL030W Histone H4 physical 1 1 1 Affinity Capture-MS
STO1 YMR125W Large subunit of the nuclear mRNA cap-binding protein complex physical 1 1 1 Affinity Capture-MS
TIF4631 YGR162W Translation initiation factor eIF4G and scaffold protein physical 1 1 1 Affinity Capture-MS
YLR363W-A YLR363W-A Protein of unknown function physical 1 1 1 Affinity Capture-MS
RPL13B YMR142C Ribosomal 60S subunit protein L13B physical 1 1 1 Affinity Capture-MS
RPS17A YML024W Ribosomal protein 51 (rp51) of the small (40s) subunit physical 1 1 1 Affinity Capture-MS
RPS24B YIL069C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-MS
RPS4A YJR145C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-MS
RPS6A YPL090C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-MS
IMD2 YHR216W Inosine monophosphate dehydrogenase physical 1 1 1 Affinity Capture-MS
IMD3 YLR432W Inosine monophosphate dehydrogenase physical 1 1 1 Affinity Capture-MS
XRN1 YGL173C Evolutionarily-conserved 5'-3' exonuclease physical 1 1 1 Affinity Capture-MS
XRN1 YGL173C Evolutionarily-conserved 5'-3' exonuclease genetic 1 1 1 Phenotypic Suppression
PAB1 YER165W Poly(A) binding protein physical 1 1 1 Affinity Capture-MS
RPL7B YPL198W Ribosomal 60S subunit protein L7B physical 1 1 1 Affinity Capture-MS
RPS8A YBL072C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-MS
RPL11A YPR102C Ribosomal 60S subunit protein L11A physical 1 1 1 Affinity Capture-MS
RPL36B YPL249C-A Ribosomal 60S subunit protein L36B physical 1 1 1 Affinity Capture-MS
TDA7 YNL176C Cell cycle-regulated gene of unknown function physical 1 1 1 Affinity Capture-RNA
SFP1 YLR403W Regulates transcription of ribosomal protein and biogenesis genes physical 1 1 1 Affinity Capture-RNA
STB3 YDR169C Ribosomal RNA processing element (RRPE)-binding protein physical 1 1 1 Affinity Capture-RNA
MFA2 YNL145W Mating pheromone a-factor physical 1 1 1 Affinity Capture-RNA
SKN7 YHR206W Nuclear response regulator and transcription factor physical 1 1 1 Affinity Capture-RNA
SCD5 YOR329C Protein required for normal actin organization and endocytosis physical 1 1 1 Affinity Capture-RNA
SCW11 YGL028C Cell wall protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
IME1 YJR094C Master regulator of meiosis that is active only during meiotic events physical 1 1 1 Affinity Capture-RNA
RTK1 YDL025C Putative protein kinase, potentially phosphorylated by Cdc28p physical 1 1 1 Affinity Capture-RNA
OCA5 YHL029C Cytoplasmic protein required for replication of Brome mosaic virus physical 1 1 1 Affinity Capture-RNA
TIP41 YPR040W Tap42p-interacting protein physical 1 1 1 Affinity Capture-RNA
MSS11 YMR164C Transcription factor physical 1 1 1 Affinity Capture-RNA
RPL5 YPL131W Ribosomal 60S subunit protein L5 physical 1 1 1 Affinity Capture-RNA
PSR1 YLL010C Plasma membrane-associated protein phosphatase physical 1 1 1 Affinity Capture-RNA
HRK1 YOR267C Protein kinase physical 1 1 1 Affinity Capture-RNA
PIN4 YBL051C Protein involved in G2/M phase progression and response to DNA damage physical 1 1 1 Affinity Capture-RNA
IXR1 YKL032C Transcriptional repressor that regulates hypoxic genes during normoxia physical 1 1 1 Affinity Capture-RNA
VPS55 YJR044C Late endosomal protein involved in late endosome to vacuole transport physical 1 1 1 Affinity Capture-RNA
SVL3 YPL032C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
STE24 YJR117W Highly conserved zinc metalloprotease physical 1 1 1 Affinity Capture-RNA
INA1 YLR413W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SUN4 YNL066W Cell wall protein related to glucanases localized in birth scars physical 1 1 1 Affinity Capture-RNA
OST3 YOR085W Gamma subunit of the oligosaccharyltransferase complex of the ER lumen physical 1 1 1 Affinity Capture-RNA
YDL012C YDL012C Tail-anchored plasma membrane protein with a conserved CYSTM module physical 1 1 1 Affinity Capture-RNA
YBR238C YBR238C Mitochondrial membrane protein physical 1 1 1 Affinity Capture-RNA
WSC2 YNL283C Sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway physical 1 1 1 Affinity Capture-RNA
WSC2 YNL283C Sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway genetic 1 1 1 Dosage Rescue
YNL190W YNL190W Hydrophilin essential in desiccation-rehydration process physical 1 1 1 Affinity Capture-RNA
RSM23 YGL129C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
SKO1 YNL167C Basic leucine zipper transcription factor of the ATF/CREB family physical 1 1 1 Affinity Capture-RNA
PPQ1 YPL179W Protein phosphatase that regulates the mating response physical 1 1 1 Affinity Capture-RNA
MOT3 YMR070W Transcriptional repressor, activator physical 1 1 1 Affinity Capture-RNA
TOS7 YOL019W Protein involved in secretion and cell wall organization physical 1 1 1 Affinity Capture-RNA
YBL081W YBL081W Non-essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
WHI3 YNL197C RNA binding protein that modulates mRNA stability physical 1 1 1 Affinity Capture-RNA
SRL1 YOR247W Mannoprotein that exhibits a tight association with the cell wall physical 1 1 1 Affinity Capture-RNA
RPM2 YML091C Protein subunit of mitochondrial RNase P physical 1 1 1 Affinity Capture-RNA
KRE1 YNL322C Cell wall glycoprotein involved in beta-glucan assembly physical 1 1 1 Affinity Capture-RNA
YAR066W YAR066W Putative GPI protein physical 1 1 1 Affinity Capture-RNA
NCE103 YNL036W Carbonic anhydrase physical 1 1 1 Affinity Capture-RNA
MRPL4 YLR439W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
PHD1 YKL043W Transcriptional activator that enhances pseudohyphal growth physical 1 1 1 Affinity Capture-RNA
VTS1 YOR359W Flap-structured DNA-binding and RNA-binding protein physical 1 1 1 Affinity Capture-RNA
YBR016W YBR016W Tail-anchored plasma membrane protein with a conserved CYSTM module physical 1 1 1 Affinity Capture-RNA
TRM112 YNR046W Protein involved in methylation of tRNA, rRNA, and translation factors physical 1 1 1 Affinity Capture-RNA
YML053C YML053C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SLS1 YLR139C Mitochondrial membrane protein physical 1 1 1 Affinity Capture-RNA
RPO21 YDL140C RNA polymerase II largest subunit B220 physical 1 1 1 Affinity Capture-RNA
SLM1 YIL105C Phosphoinositide PI4,5P(2) binding protein, forms a complex with Slm2p physical 1 1 1 Affinity Capture-RNA
SPO12 YHR152W Nucleolar protein of unknown function physical 1 1 1 Affinity Capture-RNA
RGL1 YPL066W Regulator of Rho1p signaling, cofactor of Tus1p physical 1 1 1 Affinity Capture-RNA
RTN1 YDR233C Reticulon protein physical 1 1 1 Affinity Capture-RNA
YPL068C YPL068C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SEC31 YDL195W Component of the Sec13p-Sec31p complex of the COPII vesicle coat physical 1 1 1 Affinity Capture-RNA
PPZ1 YML016C Serine/threonine protein phosphatase Z, isoform of Ppz2p physical 1 1 1 Affinity Capture-RNA
SFL1 YOR140W Transcriptional repressor and activator physical 1 1 1 Affinity Capture-RNA
TGL5 YOR081C Bifunctional triacylglycerol lipase and LPA acyltransferase physical 1 1 1 Affinity Capture-RNA
JSN1 YJR091C Member of the Puf family of RNA-binding proteins physical 1 1 1 Affinity Capture-RNA
RTS1 YOR014W B-type regulatory subunit of protein phosphatase 2A (PP2A) physical 1 1 1 Affinity Capture-RNA
NDD1 YOR372C Transcriptional activator essential for nuclear division physical 1 1 1 Affinity Capture-RNA
VAN1 YML115C Component of the mannan polymerase I physical 1 1 1 Affinity Capture-RNA
RLM1 YPL089C MADS-box transcription factor physical 1 1 1 Affinity Capture-RNA
STP4 YDL048C Protein containing a Kruppel-type zinc-finger domain physical 1 1 1 Affinity Capture-RNA
UBP10 YNL186W Ubiquitin-specific protease, deubiquitinates Ub-protein moieties physical 1 1 1 Affinity Capture-RNA
PRY2 YKR013W Sterol binding protein involved in the export of acetylated sterols physical 1 1 1 Affinity Capture-RNA
SWI1 YPL016W Subunit of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
MYO3 YKL129C One of two type I myosins physical 1 1 1 Affinity Capture-RNA
MAM3 YOL060C Protein involved in magnesium homeostasis physical 1 1 1 Affinity Capture-RNA
YNR014W YNR014W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SIM1 YIL123W Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p) physical 1 1 1 Affinity Capture-RNA
HMS2 YJR147W Protein with similarity to heat shock transcription factors physical 1 1 1 Affinity Capture-RNA
SMX3 YPR182W Core Sm protein Sm F physical 1 1 1 Affinity Capture-RNA
ICY1 YMR195W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MIT1 YEL007W Transcriptional regulator of pseudohyphal growth physical 1 1 1 Affinity Capture-RNA
RFX1 YLR176C Major transcriptional repressor of DNA-damage-regulated genes physical 1 1 1 Affinity Capture-RNA
WSC3 YOL105C Sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway physical 1 1 1 Affinity Capture-RNA
TAF11 YML015C TFIID subunit (40 kDa) physical 1 1 1 Affinity Capture-RNA
TOM40 YMR203W Component of the TOM (translocase of outer membrane) complex physical 1 1 1 Affinity Capture-RNA
PIR1 YKL164C O-glycosylated protein required for cell wall stability physical 1 1 1 Affinity Capture-RNA
NRM1 YNR009W Transcriptional co-repressor of MBF-regulated gene expression physical 1 1 1 Affinity Capture-RNA
ORM2 YLR350W Protein that mediates sphingolipid homeostasis physical 1 1 1 Affinity Capture-RNA
PAN3 YKL025C Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex physical 1 1 1 Affinity Capture-RNA
YAH1 YPL252C Ferredoxin of the mitochondrial matrix physical 1 1 1 Affinity Capture-RNA
HRR25 YPL204W Conserved casein kinase, monopolin subunit physical 1 1 1 Affinity Capture-RNA
SUR1 YPL057C Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit physical 1 1 1 Affinity Capture-RNA
XBP1 YIL101C Transcriptional repressor physical 1 1 1 Affinity Capture-RNA
MSA2 YKR077W Putative transcriptional activator physical 1 1 1 Affinity Capture-RNA
SOK1 YDR006C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SDD4 YPR022C Putative transcription factor, as suggested by computational analysis physical 1 1 1 Affinity Capture-RNA
SDS23 YGL056C Protein involved in cell separation during budding physical 1 1 1 Affinity Capture-RNA
UFO1 YML088W F-box receptor protein physical 1 1 1 Affinity Capture-RNA
MLF3 YNL074C Serine-rich protein of unknown function physical 1 1 1 Affinity Capture-RNA
TRS65 YGR166W Component of transport protein particle (TRAPP) complex II physical 1 1 1 Affinity Capture-RNA
VHS2 YIL135C Regulator of septin dynamics physical 1 1 1 Affinity Capture-RNA
TOD6 YBL054W PAC motif binding protein involved in rRNA and ribosome biogenesis physical 1 1 1 Affinity Capture-RNA
RTS3 YGR161C Putative component of the protein phosphatase type 2A complex physical 1 1 1 Affinity Capture-RNA
PDP3 YLR455W Component of the NuA3b histone acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
YER158C YER158C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SEC23 YPR181C GTPase-activating protein, stimulates the GTPase activity of Sar1p physical 1 1 1 Affinity Capture-RNA
SYP1 YCR030C Negative regulator of WASP-Arp23 complex physical 1 1 1 Affinity Capture-RNA
YAP1801 YHR161C Protein of the AP180 family, involved in clathrin cage assembly physical 1 1 1 Affinity Capture-RNA
TDA4 YJR116W Protein distantly similar to ceramide synthases, Lag1p and Lac1p physical 1 1 1 Affinity Capture-RNA
SCW10 YMR305C Cell wall protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
RSC1 YGR056W Component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
HKR1 YDR420W Mucin family member that functions as an osmosensor in the HOG pathway physical 1 1 1 Affinity Capture-RNA
RFU1 YLR073C Protein that inhibits Doa4p deubiquitinating activity physical 1 1 1 Affinity Capture-RNA
KSS1 YGR040W Mitogen-activated protein kinase (MAPK) physical 1 1 1 Affinity Capture-RNA
PHO2 YDL106C Homeobox transcription factor physical 1 1 1 Affinity Capture-RNA
ZAP1 YJL056C Zinc-regulated transcription factor physical 1 1 1 Affinity Capture-RNA
TOS6 YNL300W Glycosylphosphatidylinositol-dependent cell wall protein physical 1 1 1 Affinity Capture-RNA
UBP3 YER151C Ubiquitin-specific protease that cleaves Ub-protein fusions physical 1 1 1 Affinity Capture-RNA
LAS17 YOR181W Actin assembly factor physical 1 1 1 Affinity Capture-RNA
YHR213W YHR213W Pseudogenic fragment with similarity to flocculins physical 1 1 1 Affinity Capture-RNA
SNF11 YDR073W Subunit of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
SED1 YDR077W Major stress-induced structural GPI-cell wall glycoprotein physical 1 1 1 Affinity Capture-RNA
NGR1 YBR212W RNA binding protein that negatively regulates growth rate physical 1 1 1 Affinity Capture-RNA
SFK1 YKL051W Protein that regulates phospholipid asymmetry at plasma membrane physical 1 1 1 Affinity Capture-RNA
YPL229W YPL229W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
NAB3 YPL190C RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p) physical 1 1 1 Affinity Capture-RNA
IRE1 YHR079C Serine-threonine kinase and endoribonuclease physical 1 1 1 Affinity Capture-RNA
SGF73 YGL066W Subunit of DUBm module of SAGA and SLIK physical 1 1 1 Affinity Capture-RNA
SEC61 YLR378C Conserved ER protein translocation channel physical 1 1 1 Affinity Capture-RNA
YHR214W YHR214W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MPT5 YGL178W mRNA-binding protein of the PUF family physical 1 1 1 Affinity Capture-RNA
YPR202W YPR202W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SIZ1 YDR409W SUMO E3 ligase physical 1 1 1 Affinity Capture-RNA
TIR3 YIL011W Cell wall mannoprotein physical 1 1 1 Affinity Capture-RNA
NCW2 YLR194C GPI-anchored protein involved in cell wall remodeling physical 1 1 1 Affinity Capture-RNA
YOX1 YML027W Homeobox transcriptional repressor physical 1 1 1 Affinity Capture-RNA
YIL055C YIL055C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YHR054C YHR054C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
VID22 YLR373C G-quadruplex (G4) DNA binding protein physical 1 1 1 Affinity Capture-RNA
MIG2 YGL209W Zinc finger transcriptional repressor physical 1 1 1 Affinity Capture-RNA
PRE8 YML092C Alpha 2 subunit of the 20S proteasome physical 1 1 1 Affinity Capture-RNA
NTE1 YML059C Serine esterase physical 1 1 1 Affinity Capture-RNA
SLM2 YNL047C Phosphoinositide PI4,5P(2) binding protein, forms a complex with Slm1p physical 1 1 1 Affinity Capture-RNA
NCE102 YPR149W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
STB1 YNL309W Protein with role in regulation of MBF-specific transcription at Start physical 1 1 1 Affinity Capture-RNA
SRO9 YCL037C Cytoplasmic RNA-binding protein physical 1 1 1 Affinity Capture-RNA
SNF5 YBR289W Subunit of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
SCW4 YGR279C Cell wall protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
PEF1 YGR058W Penta-EF-hand protein physical 1 1 1 Affinity Capture-RNA
SBH1 YER087C-B Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p) physical 1 1 1 Affinity Capture-RNA
VHR1 YIL056W Transcriptional activator physical 1 1 1 Affinity Capture-RNA
YOL153C YOL153C Blocked reading frame, contains two in-frame stops in translation physical 1 1 1 Affinity Capture-RNA
INN1 YNL152W Essential protein that associates with contractile actomyosin ring physical 1 1 1 Affinity Capture-RNA
PBP2 YBR233W RNA binding protein physical 1 1 1 Affinity Capture-RNA
YLR446W YLR446W Putative hexokinase physical 1 1 1 Affinity Capture-RNA
YMR181C YMR181C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
IME4 YGL192W mRNA N6-adenosine methyltransferase physical 1 1 1 Affinity Capture-RNA
TPO3 YPR156C Polyamine transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
PTK1 YKL198C Putative serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
SVS1 YPL163C Cell wall and vacuolar protein physical 1 1 1 Affinity Capture-RNA
VPS27 YNR006W Endosomal protein that forms a complex with Hse1p physical 1 1 1 Affinity Capture-RNA
PRM7 YDL039C Pheromone-regulated protein physical 1 1 1 Affinity Capture-RNA
YGP1 YNL160W Cell wall-related secretory glycoprotein physical 1 1 1 Affinity Capture-RNA
TOR1 YJR066W PIK-related protein kinase and rapamycin target physical 1 1 1 Affinity Capture-RNA
YAL064W-B YAL064W-B Fungal-specific protein of unknown function physical 1 1 1 Affinity Capture-RNA
MED2 YDL005C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
VPS28 YPL065W Component of the ESCRT-I complex physical 1 1 1 Affinity Capture-RNA
YOR342C YOR342C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MSN4 YKL062W Stress-responsive transcriptional activator physical 1 1 1 Affinity Capture-RNA
MRN1 YPL184C RNA-binding protein that may be involved in translational regulation physical 1 1 1 Affinity Capture-RNA
SMP3 YOR149C Alpha 1,2-mannosyltransferase physical 1 1 1 Affinity Capture-RNA
SED5 YLR026C cis-Golgi t-SNARE syntaxin physical 1 1 1 Affinity Capture-RNA
VIK1 YPL253C Protein that forms a kinesin-14 heterodimeric motor with Kar3p physical 1 1 1 Affinity Capture-RNA
YLL066C YLL066C Putative Y' element ATP-dependent helicase physical 1 1 1 Affinity Capture-RNA
YPS3 YLR121C Aspartic protease physical 1 1 1 Affinity Capture-RNA
PUF3 YLL013C Protein of the mitochondrial outer surface physical 1 1 1 Affinity Capture-RNA
YPD1 YDL235C Osmotic stress-responsive phosphorelay intermediate sensor protein physical 1 1 1 Affinity Capture-RNA
RGD3 YHR182W GTPase activating protein (GAP) for Rho3p, involved in cell polarity g physical 1 1 1 Affinity Capture-RNA
YNL058C YNL058C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RGM1 YMR182C Putative zinc finger DNA binding transcription factor physical 1 1 1 Affinity Capture-RNA
SNX41 YDR425W Sorting nexin physical 1 1 1 Affinity Capture-RNA
SOD2 YHR008C Mitochondrial manganese superoxide dismutase physical 1 1 1 Affinity Capture-RNA
YER189W YER189W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SSD1 YDR293C Translational repressor physical 1 1 1 Affinity Capture-RNA
SSD1 YDR293C Translational repressor genetic 1 1 1 Dosage Rescue
VHS3 YOR054C Negative regulatory subunit of protein phosphatase 1 Ppz1p physical 1 1 1 Affinity Capture-RNA
PFK27 YOL136C 6-phosphofructo-2-kinase physical 1 1 1 Affinity Capture-RNA
OM14 YBR230C Mitochondrial outer membrane receptor for cytosolic ribosomes physical 1 1 1 Affinity Capture-RNA
SDS24 YBR214W Protein involved in cell separation during budding physical 1 1 1 Affinity Capture-RNA
ISU1 YPL135W Conserved protein of the mitochondrial matrix physical 1 1 1 Affinity Capture-RNA
RRP7 YCL031C Essential protein involved in rRNA processing and ribosome biogenesis physical 1 1 1 Affinity Capture-RNA
ZRG17 YNR039C Endoplasmic reticulum zinc transporter physical 1 1 1 Affinity Capture-RNA
ILV1 YER086W Threonine deaminase, catalyzes first step in isoleucine biosynthesis physical 1 1 1 Affinity Capture-RNA
PIN3 YPR154W Negative regulator of actin nucleation-promoting factor activity physical 1 1 1 Affinity Capture-RNA
PML39 YML107C Protein required for nuclear retention of unspliced pre-mRNAs physical 1 1 1 Affinity Capture-RNA
TAF12 YDR145W Subunit (61/68 kDa) of TFIID and SAGA complexes physical 1 1 1 Affinity Capture-RNA
NST1 YNL091W Translational inhibitor and suppressor of proteasome-assembly defects physical 1 1 1 Affinity Capture-RNA
SUT1 YGL162W Zn(II)2Cys6 family transcription factor physical 1 1 1 Affinity Capture-RNA
PUF4 YGL014W Member of the PUF protein family physical 1 1 1 Affinity Capture-RNA
YIL177C YIL177C Putative Y' element ATP-dependent helicase physical 1 1 1 Affinity Capture-RNA
ROM2 YLR371W Guanine nucleotide exchange factor (GEF) for Rho1p and Rho2p physical 1 1 1 Affinity Capture-RNA
MSA1 YOR066W Activator of G1-specific transcription factors MBF and SBF physical 1 1 1 Affinity Capture-RNA
MKK1 YOR231W MAPKK involved in the protein kinase C signaling pathway physical 1 1 1 Affinity Capture-RNA
RAD50 YNL250W Subunit of MRX complex with Mre11p and Xrs2p physical 1 1 1 Affinity Capture-RNA
YJL225C YJL225C Putative Y' element ATP-dependent helicase physical 1 1 1 Affinity Capture-RNA
HEK2 YBL032W RNA binding protein involved in asymmetric localization of ASH1 mRNA physical 1 1 1 Affinity Capture-RNA
PSP1 YDR505C Asn and gln rich protein of unknown function physical 1 1 1 Affinity Capture-RNA
YCL068C YCL068C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
ZDS2 YML109W Protein with a role in regulating Swe1p-dependent polarized growth physical 1 1 1 Affinity Capture-RNA
YGL036W YGL036W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SKG3 YLR187W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MGR1 YCL044C Subunit of the mitochondrial (mt) i-AAA protease supercomplex physical 1 1 1 Affinity Capture-RNA
LCL1 YPL056C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YOR302W YOR302W CPA1 uORF physical 1 1 1 Affinity Capture-RNA
PTI1 YGR156W Essential component of CPF (cleavage and polyadenylation factor) physical 1 1 1 Affinity Capture-RNA
PTI1 YGR156W Essential component of CPF (cleavage and polyadenylation factor) genetic 1 1 1 Negative Genetic
ROX1 YPR065W Heme-dependent repressor of hypoxic genes physical 1 1 1 Affinity Capture-RNA
URB1 YKL014C Protein required for the normal accumulation of 25S and 5.8S rRNAs physical 1 1 1 Affinity Capture-RNA
TOS1 YBR162C Covalently-bound cell wall protein of unknown function physical 1 1 1 Affinity Capture-RNA
MDM34 YGL219C Mitochondrial component of the ERMES complex physical 1 1 1 Affinity Capture-RNA
SKP2 YNL311C F-box protein of unknown function physical 1 1 1 Affinity Capture-RNA
NAF1 YNL124W RNA-binding protein required for the assembly of box H/ACA snoRNPs physical 1 1 1 Affinity Capture-RNA
UME6 YDR207C Rpd3L histone deacetylase complex subunit physical 1 1 1 Affinity Capture-RNA
UTH1 YKR042W Mitochondrial inner membrane protein physical 1 1 1 Affinity Capture-RNA
RSC30 YHR056C Component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
URB2 YJR041C Protein required for normal metabolism of the rRNA primary transcript physical 1 1 1 Affinity Capture-RNA
SFC1 YJR095W Mitochondrial succinate-fumarate transporter physical 1 1 1 Affinity Capture-RNA
UBP11 YKR098C Ubiquitin-specific protease physical 1 1 1 Affinity Capture-RNA
IZH1 YDR492W Membrane protein involved in zinc ion homeostasis physical 1 1 1 Affinity Capture-RNA
TPH3 YJL016W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MMF1 YIL051C Mitochondrial protein required for transamination of isoleucine physical 1 1 1 Affinity Capture-RNA
NMA1 YLR328W Nicotinic acid mononucleotide adenylyltransferase physical 1 1 1 Affinity Capture-RNA
ROF1 YHR177W Putative transcription factor containing a WOPR domain physical 1 1 1 Affinity Capture-RNA
YET2 YMR040W Protein of unknown function that may interact with ribosomes physical 1 1 1 Affinity Capture-RNA
UTR2 YEL040W Chitin transglycosylase physical 1 1 1 Affinity Capture-RNA
YBL113C YBL113C Helicase-like protein encoded within the telomeric Y' element physical 1 1 1 Affinity Capture-RNA
HPF1 YOL155C Haze-protective mannoprotein physical 1 1 1 Affinity Capture-RNA
YMR317W YMR317W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PAN1 YIR006C Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p physical 1 1 1 Affinity Capture-RNA
NPR1 YNL183C Protein kinase physical 1 1 1 Affinity Capture-RNA
MSB1 YOR188W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
HXT5 YHR096C Hexose transporter with moderate affinity for glucose physical 1 1 1 Affinity Capture-RNA
TAX4 YJL083W EH domain-containing protein physical 1 1 1 Affinity Capture-RNA
UBC4 YBR082C Ubiquitin-conjugating enzyme (E2) physical 1 1 1 Affinity Capture-RNA
TYE7 YOR344C Serine-rich protein that contains a bHLH DNA binding motif physical 1 1 1 Affinity Capture-RNA
PRP8 YHR165C Component of U4/U6-U5 snRNP complex physical 1 1 1 Affinity Capture-RNA
RPL20A YMR242C Ribosomal 60S subunit protein L20A physical 1 1 1 Affinity Capture-RNA
SPT23 YKL020C ER membrane protein involved in regulation of OLE1 transcription physical 1 1 1 Affinity Capture-RNA
STE5 YDR103W Pheromone-responsive MAPK scaffold protein physical 1 1 1 Affinity Capture-RNA
NNF2 YGR089W Protein that exhibits physical and genetic interactions with Rpb8p physical 1 1 1 Affinity Capture-RNA
YLL067C YLL067C Putative Y' element ATP-dependent helicase physical 1 1 1 Affinity Capture-RNA
LIH1 YJR107W Putative lipase physical 1 1 1 Affinity Capture-RNA
STE20 YHL007C Cdc42p-activated signal transducing kinase physical 1 1 1 Affinity Capture-RNA
YBT1 YLL048C Transporter of the ATP-binding cassette (ABC) family physical 1 1 1 Affinity Capture-RNA
SNF8 YPL002C Component of the ESCRT-II complex physical 1 1 1 Affinity Capture-RNA
PRM5 YIL117C Pheromone-regulated protein, predicted to have 1 transmembrane segment physical 1 1 1 Affinity Capture-RNA
ULP2 YIL031W Peptidase that deconjugates Smt3/SUMO-1 peptides from proteins physical 1 1 1 Affinity Capture-RNA
YJL193W YJL193W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YBR071W YBR071W Protein of unknown function found in the cytoplasm and bud neck physical 1 1 1 Affinity Capture-RNA
VNX1 YNL321W Calcium/H+ antiporter localized to the endoplasmic reticulum membrane physical 1 1 1 Affinity Capture-RNA
POP2 YNR052C Subunit of Ccr4-Not complex that mediates 3' to 5' mRNA deadenylation physical 1 1 1 Affinity Capture-RNA
TMC1 YOR052C AN1-type zinc finger protein, effector of proteotoxic stress response physical 1 1 1 Affinity Capture-RNA
WHI4 YDL224C Putative RNA binding protein physical 1 1 1 Affinity Capture-RNA
RPB4 YJL140W RNA polymerase II subunit B32 physical 1 1 1 Affinity Capture-RNA
PRY1 YJL079C Lipid binding protein physical 1 1 1 Affinity Capture-RNA
YCK2 YNL154C Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform physical 1 1 1 Affinity Capture-RNA
STE13 YOR219C Dipeptidyl aminopeptidase physical 1 1 1 Affinity Capture-RNA
RBS1 YDL189W Protein involved in assembly of the RNA Pol III complex physical 1 1 1 Affinity Capture-RNA
NPR3 YHL023C Subunit of the Iml1p/SEACIT complex physical 1 1 1 Affinity Capture-RNA
TPO2 YGR138C Polyamine transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
IPT1 YDR072C Inositolphosphotransferase physical 1 1 1 Affinity Capture-RNA
SEC16 YPL085W COPII vesicle coat protein required for ER transport vesicle budding physical 1 1 1 Affinity Capture-RNA
NRD1 YNL251C RNA-binding subunit of Nrd1 complex physical 1 1 1 Affinity Capture-RNA
NUD1 YOR373W Mitotic exit network (MEN) scaffold protein physical 1 1 1 Affinity Capture-RNA
YER085C YER085C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SUB1 YMR039C Transcriptional regulator physical 1 1 1 Affinity Capture-RNA
RCE1 YMR274C Type II CAAX prenyl protease physical 1 1 1 Affinity Capture-RNA
ISA1 YLL027W Protein required for maturation of mitochondrial [4Fe-4S] proteins physical 1 1 1 Affinity Capture-RNA
YLR462W YLR462W Putative protein of unknown function with similarity to helicases physical 1 1 1 Affinity Capture-RNA
YHL049C YHL049C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
TVS1 YCR061W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YOL036W YOL036W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MSS4 YDR208W Phosphatidylinositol-4-phosphate 5-kinase physical 1 1 1 Affinity Capture-RNA
IES3 YLR052W Subunit of the INO80 chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
SPG3 YDR504C Protein required for high temperature survival during stationary phase physical 1 1 1 Affinity Capture-RNA
YML083C YML083C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PCF11 YDR228C mRNA 3' end processing factor physical 1 1 1 Affinity Capture-RNA
YGR130C YGR130C Component of the eisosome with unknown function physical 1 1 1 Affinity Capture-RNA
RIM101 YHL027W Cys2His2 zinc-finger transcriptional repressor physical 1 1 1 Affinity Capture-RNA
MRP35 YNL122C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
SAG1 YJR004C Alpha-agglutinin of alpha-cells physical 1 1 1 Affinity Capture-RNA
RGS2 YOR107W Negative regulator of glucose-induced cAMP signaling physical 1 1 1 Affinity Capture-RNA
HXT17 YNR072W Putative transmembrane polyol transporter physical 1 1 1 Affinity Capture-RNA
SWS2 YNL081C Putative mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
SWS2 YNL081C Putative mitochondrial ribosomal protein of the small subunit genetic 1 1 1 Negative Genetic
HOM2 YDR158W Aspartic beta semi-aldehyde dehydrogenase physical 1 1 1 Affinity Capture-RNA
SED4 YCR067C Integral ER membrane protein that stimulates Sar1p GTPase activity physical 1 1 1 Affinity Capture-RNA
USV1 YPL230W Putative transcription factor containing a C2H2 zinc finger physical 1 1 1 Affinity Capture-RNA
SPT7 YBR081C Subunit of the SAGA transcriptional regulatory complex physical 1 1 1 Affinity Capture-RNA
SCY1 YGL083W Putative kinase physical 1 1 1 Affinity Capture-RNA
YPR203W YPR203W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
ZDS1 YMR273C Protein with a role in regulating Swe1p-dependent polarized growth physical 1 1 1 Affinity Capture-RNA
RSF2 YJR127C Zinc-finger protein physical 1 1 1 Affinity Capture-RNA
NPL3 YDR432W RNA-binding protein physical 1 1 1 Affinity Capture-RNA
YJL118W YJL118W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MCH1 YDL054C Protein with similarity to mammalian monocarboxylate permeases physical 1 1 1 Affinity Capture-RNA
MRP4 YHL004W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
VPS24 YKL041W One of four subunits of the ESCRT-III complex physical 1 1 1 Affinity Capture-RNA
WSS1 YHR134W SUMO-ligase and SUMO-targeted metalloprotease physical 1 1 1 Affinity Capture-RNA
WSC4 YHL028W Endoplasmic reticulum (ER) membrane protein physical 1 1 1 Affinity Capture-RNA
POG1 YIL122W DNA-binding transcriptional activator physical 1 1 1 Affinity Capture-RNA
MSL5 YLR116W Component of commitment complex physical 1 1 1 Affinity Capture-RNA
TUS1 YLR425W Guanine nucleotide exchange factor (GEF) that modulates Rho1p activity physical 1 1 1 Affinity Capture-RNA
RAD55 YDR076W Protein that stimulates strand exchange physical 1 1 1 Affinity Capture-RNA
MRS4 YKR052C Iron transporter of the mitochondrial carrier family physical 1 1 1 Affinity Capture-RNA
YPR063C YPR063C ER-localized protein of unknown function physical 1 1 1 Affinity Capture-RNA
SIR4 YDR227W SIR protein involved in assembly of silent chromatin domains physical 1 1 1 Affinity Capture-RNA
YAP1802 YGR241C Protein of the AP180 family, involved in clathrin cage assembly physical 1 1 1 Affinity Capture-RNA
MGA1 YGR249W Protein similar to heat shock transcription factor physical 1 1 1 Affinity Capture-RNA
YCL020W YCL020W Retrotransposon TYA Gag gene co-transcribed with TYB Pol physical 1 1 1 Affinity Capture-RNA
YLR278C YLR278C Zinc-cluster protein physical 1 1 1 Affinity Capture-RNA
KOG1 YHR186C Subunit of TORC1 physical 1 1 1 Affinity Capture-RNA
RCO1 YMR075W Essential component of the Rpd3S histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
PGA1 YNL158W Essential component of GPI-mannosyltransferase II physical 1 1 1 Affinity Capture-RNA
OST4 YDL232W Subunit of the oligosaccharyltransferase complex of the ER lumen physical 1 1 1 Affinity Capture-RNA
MET4 YNL103W Leucine-zipper transcriptional activator physical 1 1 1 Affinity Capture-RNA
TIR4 YOR009W Cell wall mannoprotein physical 1 1 1 Affinity Capture-RNA
SUM1 YDR310C Transcriptional repressor that regulates middle-sporulation genes physical 1 1 1 Affinity Capture-RNA
HER1 YOR227W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SPS2 YDR522C Protein expressed during sporulation physical 1 1 1 Affinity Capture-RNA
YRF1-5 YLR467W Helicase encoded by the Y' element of subtelomeric regions physical 1 1 1 Affinity Capture-RNA
RAD14 YMR201C Subunit of Nucleotide Excision Repair Factor 1 (NEF1) physical 1 1 1 Affinity Capture-RNA
RET2 YFR051C Delta subunit of the coatomer complex (COPI) physical 1 1 1 Affinity Capture-RNA
SEC22 YLR268W R-SNARE protein physical 1 1 1 Affinity Capture-RNA
SWI4 YER111C DNA binding component of the SBF complex (Swi4p-Swi6p) physical 1 1 1 Affinity Capture-RNA
PST1 YDR055W Cell wall protein that contains a putative GPI-attachment site physical 1 1 1 Affinity Capture-RNA
YRF1-6 YNL339C Helicase encoded by the Y' element of subtelomeric regions physical 1 1 1 Affinity Capture-RNA
PUF2 YPR042C PUF family mRNA-binding protein physical 1 1 1 Affinity Capture-RNA
MRH1 YDR033W Protein that localizes primarily to the plasma membrane physical 1 1 1 Affinity Capture-RNA
PBS2 YJL128C MAP kinase kinase of the HOG signaling pathway physical 1 1 1 Affinity Capture-RNA
UBP5 YER144C Putative ubiquitin-specific protease physical 1 1 1 Affinity Capture-RNA
PCL2 YDL127W Cyclin, interacts with cyclin-dependent kinase Pho85p physical 1 1 1 Affinity Capture-RNA
LST7 YGR057C Subunit of the Lst4p-Lst7p GTPase activating protein complex for Gtr2p physical 1 1 1 Affinity Capture-RNA
HXT2 YMR011W High-affinity glucose transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
MAY24 YPR153W Peripheral ER membrane protein physical 1 1 1 Affinity Capture-RNA
SPR1 YOR190W Sporulation-specific exo-1,3-beta-glucanase physical 1 1 1 Affinity Capture-RNA
STB4 YMR019W Putative transcription factor physical 1 1 1 Affinity Capture-RNA
TFA1 YKL028W TFIIE large subunit physical 1 1 1 Affinity Capture-RNA
HUA1 YGR268C Cytoplasmic protein containing a zinc finger domain physical 1 1 1 Affinity Capture-RNA
HSP42 YDR171W Small heat shock protein (sHSP) with chaperone activity physical 1 1 1 Affinity Capture-RNA
LCB1 YMR296C Component of serine palmitoyltransferase physical 1 1 1 Affinity Capture-RNA
SRO7 YPR032W Effector of Rab GTPase Sec4p physical 1 1 1 Affinity Capture-RNA
TRS31 YDR472W Core component of transport protein particle (TRAPP) complexes I-III physical 1 1 1 Affinity Capture-RNA
KNS1 YLL019C Protein kinase involved in negative regulation of PolIII transcription physical 1 1 1 Affinity Capture-RNA
ICS2 YBR157C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
HSP150 YJL159W O-mannosylated heat shock protein physical 1 1 1 Affinity Capture-RNA
PMA2 YPL036W Plasma membrane H+-ATPase physical 1 1 1 Affinity Capture-RNA
SHO1 YER118C Transmembrane osmosensor for filamentous growth and HOG pathways physical 1 1 1 Affinity Capture-RNA
TOS3 YGL179C Protein kinase physical 1 1 1 Affinity Capture-RNA
YPR015C YPR015C Putative zinc finger transcription factor physical 1 1 1 Affinity Capture-RNA
YHL044W YHL044W Putative integral membrane protein physical 1 1 1 Affinity Capture-RNA
SAT4 YCR008W Ser/Thr protein kinase involved in salt tolerance, nutrient response physical 1 1 1 Affinity Capture-RNA
UGA4 YDL210W GABA (gamma-aminobutyrate) permease physical 1 1 1 Affinity Capture-RNA
IML3 YBR107C Outer kinetochore protein and component of the Ctf19 complex physical 1 1 1 Affinity Capture-RNA
YDL211C YDL211C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MIX17 YMR002W Mitochondrial intermembrane space protein physical 1 1 1 Affinity Capture-RNA
JEM1 YJL073W DnaJ-like chaperone required for nuclear membrane fusion during mating physical 1 1 1 Affinity Capture-RNA
YAP6 YDR259C Basic leucine zipper (bZIP) transcription factor physical 1 1 1 Affinity Capture-RNA
YLR464W YLR464W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PTR3 YFR029W Component of the SPS plasma membrane amino acid sensor system physical 1 1 1 Affinity Capture-RNA
OXA1 YER154W Mitochondrial inner membrane insertase physical 1 1 1 Affinity Capture-RNA
SMA2 YML066C Meiosis-specific prospore membrane protein physical 1 1 1 Affinity Capture-RNA
KEX2 YNL238W Kexin, a subtilisin-like protease (proprotein convertase) physical 1 1 1 Affinity Capture-RNA
SSK2 YNR031C MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway physical 1 1 1 Affinity Capture-RNA
RPA14 YDR156W RNA polymerase I subunit A14 physical 1 1 1 Affinity Capture-RNA
SGE1 YPR198W Plasma membrane multidrug transporter physical 1 1 1 Affinity Capture-RNA
RLI1 YDR091C Essential Fe-S protein physical 1 1 1 Affinity Capture-RNA
YJL028W YJL028W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YHL050C YHL050C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YHR213W-A YHR213W-A Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YHR219W YHR219W Putative protein of unknown function with similarity to helicases physical 1 1 1 Affinity Capture-RNA
YEL076C-A YEL076C-A Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SML1 YML058W Ribonucleotide reductase inhibitor physical 1 1 1 Affinity Capture-RNA
SGN1 YIR001C Cytoplasmic RNA-binding protein physical 1 1 1 Affinity Capture-RNA
TEC1 YBR083W Transcription factor targeting filamentation genes and Ty1 expression physical 1 1 1 Affinity Capture-RNA
HLR1 YDR528W Protein involved in regulation of cell wall composition and integrity physical 1 1 1 Affinity Capture-RNA
YML108W YML108W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
TDA1 YMR291W Protein kinase of unknown cellular role physical 1 1 1 Affinity Capture-RNA
NUP188 YML103C Subunit of the inner ring of the nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
SKS1 YPL026C Putative serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
SGV1 YPR161C Cyclin (Bur2p)-dependent protein kinase physical 1 1 1 Affinity Capture-RNA
PER33 YLR064W Protein that localizes to the endoplasmic reticulum physical 1 1 1 Affinity Capture-RNA
TOS2 YGR221C Protein involved in localization of Cdc24p to the site of bud growth physical 1 1 1 Affinity Capture-RNA
HXT16 YJR158W Putative transmembrane polyol transporter physical 1 1 1 Affinity Capture-RNA
YAL065C YAL065C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YAK1 YJL141C Serine-threonine protein kinase physical 1 1 1 Affinity Capture-RNA
SNF2 YOR290C Catalytic subunit of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
SCD6 YPR129W Repressor of translation initiation physical 1 1 1 Affinity Capture-RNA
POL32 YJR043C Third subunit of DNA polymerase delta physical 1 1 1 Affinity Capture-RNA
POL32 YJR043C Third subunit of DNA polymerase delta genetic 1 1 1 Negative Genetic
IRC21 YMR073C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MSG5 YNL053W Dual-specificity protein phosphatase physical 1 1 1 Affinity Capture-RNA
YML6 YML025C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
STE23 YLR389C Metalloprotease physical 1 1 1 Affinity Capture-RNA
MEP1 YGR121C Ammonium permease physical 1 1 1 Affinity Capture-RNA
NAN1 YPL126W U3 snoRNP protein physical 1 1 1 Affinity Capture-RNA
PRM4 YPL156C Pheromone-regulated protein proposed to be involved in mating physical 1 1 1 Affinity Capture-RNA
MPC1 YGL080W Highly conserved subunit of mitochondrial pyruvate carrier (MPC) physical 1 1 1 Affinity Capture-RNA
NKP1 YDR383C Central kinetochore protein and subunit of the Ctf19 complex physical 1 1 1 Affinity Capture-RNA
SNT1 YCR033W Set3C histone deacetylase scaffold physical 1 1 1 Affinity Capture-RNA
YMR050C YMR050C Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
PSK2 YOL045W PAS-domain containing serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
YBR225W YBR225W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MED7 YOL135C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
SAC3 YDR159W mRNA export factor physical 1 1 1 Affinity Capture-RNA
RPH1 YER169W JmjC domain-containing histone demethylase physical 1 1 1 Affinity Capture-RNA
YGR237C YGR237C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
HVG1 YER039C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YBR012W-A YBR012W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol physical 1 1 1 Affinity Capture-RNA
LEE1 YPL054W Zinc-finger protein of unknown function physical 1 1 1 Affinity Capture-RNA
MDM36 YPR083W Mitochondrial protein physical 1 1 1 Affinity Capture-RNA
VAC7 YNL054W Integral vacuolar membrane protein physical 1 1 1 Affinity Capture-RNA
YPR204W YPR204W DNA helicase encoded within the telomeric Y' element physical 1 1 1 Affinity Capture-RNA
PHO80 YOL001W Cyclin physical 1 1 1 Affinity Capture-RNA
VID24 YBR105C GID Complex regulatory subunit physical 1 1 1 Affinity Capture-RNA
ISF1 YMR081C Serine-rich, hydrophilic protein physical 1 1 1 Affinity Capture-RNA
YNL234W YNL234W Protein of unknown function with similarity to globins physical 1 1 1 Affinity Capture-RNA
RNA14 YMR061W Component of the cleavage and polyadenylation factor I (CF I) physical 1 1 1 Affinity Capture-RNA
IME2 YJL106W Serine/threonine protein kinase involved in activation of meiosis physical 1 1 1 Affinity Capture-RNA
HMG1 YML075C HMG-CoA reductase physical 1 1 1 Affinity Capture-RNA
TAF3 YPL011C TFIID subunit (47 kDa) physical 1 1 1 Affinity Capture-RNA
PLB2 YMR006C Phospholipase B (lysophospholipase) involved in lipid metabolism physical 1 1 1 Affinity Capture-RNA
SPS100 YHR139C Protein required for spore wall maturation physical 1 1 1 Affinity Capture-RNA
NBA1 YOL070C Protein involved in axial bud site selection physical 1 1 1 Affinity Capture-RNA
TMA10 YLR327C Protein of unknown function that associates with ribosomes physical 1 1 1 Affinity Capture-RNA
SHQ1 YIL104C Chaperone protein physical 1 1 1 Affinity Capture-RNA
SLX5 YDL013W Subunit of the Slx5-Slx8 SUMO-targeted Ub ligase (STUbL) complex physical 1 1 1 Affinity Capture-RNA
NUP170 YBL079W Subunit of inner ring of nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
MPS3 YJL019W Nuclear envelope protein physical 1 1 1 Affinity Capture-RNA
YRF1-7 YPL283C Helicase encoded by the Y' element of subtelomeric regions physical 1 1 1 Affinity Capture-RNA
RPS23B YPR132W Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
YIL152W YIL152W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
VAM3 YOR106W Syntaxin-like vacuolar t-SNARE physical 1 1 1 Affinity Capture-RNA
MDJ2 YNL328C Constituent of the mitochondrial import motor physical 1 1 1 Affinity Capture-RNA
VTH1 YIL173W Putative membrane glycoprotein physical 1 1 1 Affinity Capture-RNA
MRPS16 YPL013C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
LAC1 YKL008C Ceramide synthase component physical 1 1 1 Affinity Capture-RNA
YMR045C YMR045C Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
PEX6 YNL329C AAA-peroxin physical 1 1 1 Affinity Capture-RNA
UBP16 YPL072W Deubiquitinating enzyme anchored to the outer mitochondrial membrane physical 1 1 1 Affinity Capture-RNA
YBL111C YBL111C Helicase-like protein encoded within the telomeric Y' element physical 1 1 1 Affinity Capture-RNA
NEJ1 YLR265C DNA end-binding protein required for nonhomologous end joining (NHEJ) physical 1 1 1 Affinity Capture-RNA
SWH1 YAR042W Protein similar to mammalian oxysterol-binding protein physical 1 1 1 Affinity Capture-RNA
PIR3 YKL163W O-glycosylated covalently-bound cell wall protein physical 1 1 1 Affinity Capture-RNA
PEX8 YGR077C Intraperoxisomal organizer of the peroxisomal import machinery physical 1 1 1 Affinity Capture-RNA
VRG4 YGL225W Golgi GDP-mannose transporter physical 1 1 1 Affinity Capture-RNA
RPL43A YPR043W Ribosomal 60S subunit protein L43A physical 1 1 1 Affinity Capture-RNA
PGD1 YGL025C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
SSH1 YBR283C Subunit of the Ssh1 translocon complex physical 1 1 1 Affinity Capture-RNA
MFG1 YDL233W Regulator of filamentous growth physical 1 1 1 Affinity Capture-RNA
VPS53 YJL029C Component of the GARP (Golgi-associated retrograde protein) complex physical 1 1 1 Affinity Capture-RNA
PTP2 YOR208W Phosphotyrosine-specific phosphatase physical 1 1 1 Affinity Capture-RNA
YNR065C YNR065C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
LIF1 YGL090W Component of the DNA ligase IV complex physical 1 1 1 Affinity Capture-RNA
MGA2 YIR033W ER membrane protein involved in regulation of OLE1 transcription physical 1 1 1 Affinity Capture-RNA
MGA2 YIR033W ER membrane protein involved in regulation of OLE1 transcription genetic 1 1 1 Negative Genetic
TOR2 YKL203C PIK-related protein kinase and rapamycin target physical 1 1 1 Affinity Capture-RNA
SND1 YDR186C Protein involved in SRP-independent targeting of substrates to the ER physical 1 1 1 Affinity Capture-RNA
PTC1 YDL006W Type 2C protein phosphatase (PP2C) physical 1 1 1 Affinity Capture-RNA
SOH1 YGL127C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
HOL1 YNR055C Putative transporter in the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
NNK1 YKL171W Protein kinase physical 1 1 1 Affinity Capture-RNA
MET2 YNL277W L-homoserine-O-acetyltransferase physical 1 1 1 Affinity Capture-RNA
SMY2 YBR172C GYF domain protein physical 1 1 1 Affinity Capture-RNA
TDA8 YAL064C-A Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
IOC4 YMR044W Member of a complex (Isw1b) with Isw1p and Ioc2p physical 1 1 1 Affinity Capture-RNA
SEG1 YMR086W Component of eisosome required for proper eisosome assembly physical 1 1 1 Affinity Capture-RNA
RGT2 YDL138W Plasma membrane high glucose sensor that regulates glucose transport physical 1 1 1 Affinity Capture-RNA
MKK2 YPL140C MAPKK involved in the protein kinase C signaling pathway physical 1 1 1 Affinity Capture-RNA
TAT2 YOL020W High affinity tryptophan and tyrosine permease physical 1 1 1 Affinity Capture-RNA
PAU20 YOL161C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YKT6 YKL196C Vesicle membrane protein (v-SNARE) with acyltransferase activity physical 1 1 1 Affinity Capture-RNA
TOF2 YKR010C Protein required for rDNA silencing and mitotic rDNA condensation physical 1 1 1 Affinity Capture-RNA
YUR1 YJL139C Mannosyltransferase involved in protein N-glycosylation physical 1 1 1 Affinity Capture-RNA
RPN4 YDL020C Transcription factor that stimulates expression of proteasome genes physical 1 1 1 Affinity Capture-RNA
SAN1 YDR143C Ubiquitin-protein ligase physical 1 1 1 Affinity Capture-RNA
YOR296W YOR296W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
LSM4 YER112W Lsm (Like Sm) protein physical 1 1 1 Affinity Capture-RNA
YPL216W YPL216W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
KHA1 YJL094C Putative K+/H+ antiporter physical 1 1 1 Affinity Capture-RNA
MRX9 YDL027C Protein that associates with mitochondrial ribosome physical 1 1 1 Affinity Capture-RNA
IGD1 YFR017C Cytoplasmic protein that inhibits Gdb1p glycogen debranching activity physical 1 1 1 Affinity Capture-RNA
UPC2 YDR213W Sterol regulatory element binding protein physical 1 1 1 Affinity Capture-RNA
OPT1 YJL212C Proton-coupled oligopeptide transporter of the plasma membrane physical 1 1 1 Affinity Capture-RNA
NRG1 YDR043C Transcriptional repressor physical 1 1 1 Affinity Capture-RNA
YLR419W YLR419W Putative helicase with limited sequence similarity to human Rb protein physical 1 1 1 Affinity Capture-RNA
YKR015C YKR015C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PAU19 YMR325W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ROT2 YBR229C Glucosidase II catalytic subunit physical 1 1 1 Affinity Capture-RNA
KIN2 YLR096W S/T protein kinase physical 1 1 1 Affinity Capture-RNA
YPR078C YPR078C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YHR214C-B YHR214C-B Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
PIL1 YGR086C Eisosome core component physical 1 1 1 Affinity Capture-RNA
PDC2 YDR081C Transcription factor for thiamine-regulated genes physical 1 1 1 Affinity Capture-RNA
STE2 YFL026W Receptor for alpha-factor pheromone physical 1 1 1 Affinity Capture-RNA
YKR045C YKR045C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YKE4 YIL023C Zinc transporter physical 1 1 1 Affinity Capture-RNA
MNP1 YGL068W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
RRT6 YGL146C Integral membrane protein, member of the p24 family physical 1 1 1 Affinity Capture-RNA
SPO1 YNL012W Meiosis-specific prospore protein physical 1 1 1 Affinity Capture-RNA
PDR3 YBL005W Transcriptional activator of the pleiotropic drug resistance network physical 1 1 1 Affinity Capture-RNA
PDR3 YBL005W Transcriptional activator of the pleiotropic drug resistance network genetic 1 1 1 Phenotypic Enhancement
YEL076C YEL076C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YHR218W YHR218W Helicase-like protein encoded within the telomeric Y' element physical 1 1 1 Affinity Capture-RNA
YJR029W YJR029W Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
YIL082W-A YIL082W-A Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
MME1 YMR166C Transporter of the mitochondrial inner membrane that exports magnesium physical 1 1 1 Affinity Capture-RNA
HEL2 YDR266C RING finger ubiquitin ligase (E3) physical 1 1 1 Affinity Capture-RNA
MCT1 YOR221C Predicted malonyl-CoA:ACP transferase physical 1 1 1 Affinity Capture-RNA
NPC2 YDL046W Sterol transport protein and functional homolog of human NPC2/He1 physical 1 1 1 Affinity Capture-RNA
RPL22B YFL034C-A Ribosomal 60S subunit protein L22A physical 1 1 1 Affinity Capture-RNA
SAM1 YLR180W S-adenosylmethionine synthetase physical 1 1 1 Affinity Capture-RNA
YMR206W YMR206W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PIN2 YOR104W Exomer-dependent cargo protein physical 1 1 1 Affinity Capture-RNA
RSC3 YDR303C Component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
PHO4 YFR034C Basic helix-loop-helix (bHLH) transcription factor of the myc-family physical 1 1 1 Affinity Capture-RNA
LDO45 YMR147W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
HFL1 YKR051W Vacuole membrane protein that interacts with Atg8p physical 1 1 1 Affinity Capture-RNA
RPA12 YJR063W RNA polymerase I subunit A12.2 physical 1 1 1 Affinity Capture-RNA
PDR15 YDR406W Plasma membrane ATP binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
RPB10 YOR210W RNA polymerase subunit ABC10-beta physical 1 1 1 Affinity Capture-RNA
SHE1 YBL031W Mitotic spindle protein physical 1 1 1 Affinity Capture-RNA
IST2 YBR086C Cortical ER protein involved in ER-plasma membrane (PM) tethering physical 1 1 1 Affinity Capture-RNA
YPL162C YPL162C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MTR10 YOR160W Nuclear import receptor physical 1 1 1 Affinity Capture-RNA
NRE1 YIR035C Putative cytoplasmic short-chain dehydrogenase/reductase physical 1 1 1 Affinity Capture-RNA
YFL064C YFL064C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SRL3 YKR091W Repressor of transcription at Start physical 1 1 1 Affinity Capture-RNA
TBF1 YPL128C Telobox-containing general regulatory factor physical 1 1 1 Affinity Capture-RNA
LDB19 YOR322C Alpha-arrestin, Ub-ligase adaptor for Rsp5p physical 1 1 1 Affinity Capture-RNA
TKL2 YBR117C Transketolase physical 1 1 1 Affinity Capture-RNA
KIN82 YCR091W Putative serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
YAR010C YAR010C Retrotransposon TYA Gag gene co-transcribed with TYB Pol physical 1 1 1 Affinity Capture-RNA
YNR066C YNR066C Putative membrane-localized protein of unknown function physical 1 1 1 Affinity Capture-RNA
QDR3 YBR043C Multidrug transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
YJR027W YJR027W Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
YHL012W YHL012W Putative UTP glucose-1-phosphate uridylyltransferase physical 1 1 1 Affinity Capture-RNA
NCA3 YJL116C Protein involved in mitochondrion organization physical 1 1 1 Affinity Capture-RNA
YIL014C-A YIL014C-A Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRPS18 YNL306W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
PHO91 YNR013C Low-affinity vacuolar phosphate transporter physical 1 1 1 Affinity Capture-RNA
SFG1 YOR315W Nuclear protein putative transcription factor physical 1 1 1 Affinity Capture-RNA
RTG3 YBL103C bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways physical 1 1 1 Affinity Capture-RNA
YML040W YML040W Retrotransposon TYA Gag gene co-transcribed with TYB Pol physical 1 1 1 Affinity Capture-RNA
SSK22 YCR073C MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway physical 1 1 1 Affinity Capture-RNA
MRK1 YDL079C Glycogen synthase kinase 3 (GSK-3) homolog physical 1 1 1 Affinity Capture-RNA
SSN8 YNL025C Cyclin-like component of RNA polymerase II holoenzyme physical 1 1 1 Affinity Capture-RNA
YRF1-3 YGR296W Helicase encoded by the Y' element of subtelomeric regions physical 1 1 1 Affinity Capture-RNA
LIP2 YLR239C Lipoyl ligase physical 1 1 1 Affinity Capture-RNA
LGE1 YPL055C Protein involved in histone H2B ubiquitination physical 1 1 1 Affinity Capture-RNA
SWF1 YDR126W Palmitoyltransferase that acts on transmembrane proteins physical 1 1 1 Affinity Capture-RNA
PAC11 YDR488C Dynein intermediate chain, microtubule motor protein physical 1 1 1 Affinity Capture-RNA
MUD1 YBR119W U1 snRNP A protein physical 1 1 1 Affinity Capture-RNA
SEC65 YML105C Subunit of the signal recognition particle (SRP) physical 1 1 1 Affinity Capture-RNA
SHU2 YDR078C Component of Shu complex (aka PCSS complex) physical 1 1 1 Affinity Capture-RNA
PHS1 YJL097W Essential 3-hydroxyacyl-CoA dehydratase of the ER membrane physical 1 1 1 Affinity Capture-RNA
YMR155W YMR155W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RIM21 YNL294C pH sensor molecule, component of the RIM101 pathway physical 1 1 1 Affinity Capture-RNA
SMC4 YLR086W Subunit of the condensin complex physical 1 1 1 Affinity Capture-RNA
YKL050C YKL050C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SST2 YLR452C GTPase-activating protein for Gpa1p physical 1 1 1 Affinity Capture-RNA
YCL019W YCL019W Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
SRS2 YJL092W DNA helicase and DNA-dependent ATPase physical 1 1 1 Affinity Capture-RNA
SRS2 YJL092W DNA helicase and DNA-dependent ATPase genetic 1 1 1 Dosage Lethality
ROD1 YOR018W Alpha-arrestin involved in ubiquitin-dependent endocytosis physical 1 1 1 Affinity Capture-RNA
MUP1 YGR055W High affinity methionine permease physical 1 1 1 Affinity Capture-RNA
YRF1-4 YLR466W Helicase encoded by the Y' element of subtelomeric regions physical 1 1 1 Affinity Capture-RNA
LCD1 YDR499W Essential protein required for the DNA integrity checkpoint pathways physical 1 1 1 Affinity Capture-RNA
TPO4 YOR273C Polyamine transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
YPS1 YLR120C Aspartic protease physical 1 1 1 Affinity Capture-RNA
RNR1 YER070W Major isoform of large subunit of ribonucleotide-diphosphate reductase physical 1 1 1 Affinity Capture-RNA
VPS70 YJR126C Protein of unknown function involved in vacuolar protein sorting physical 1 1 1 Affinity Capture-RNA
MBP1 YDL056W Transcription factor physical 1 1 1 Affinity Capture-RNA
SWE1 YJL187C Protein kinase that regulates the G2/M transition physical 1 1 1 Affinity Capture-RNA
VPS64 YDR200C Protein required for cytoplasm to vacuole targeting of proteins physical 1 1 1 Affinity Capture-RNA
STE18 YJR086W G protein gamma subunit physical 1 1 1 Affinity Capture-RNA
MOB2 YFL034C-B Activator of Cbk1p kinase physical 1 1 1 Affinity Capture-RNA
MOB2 YFL034C-B Activator of Cbk1p kinase genetic 1 1 1 Negative Genetic
SNA4 YDL123W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ZWF1 YNL241C Glucose-6-phosphate dehydrogenase (G6PD) physical 1 1 1 Affinity Capture-RNA
UMP1 YBR173C Chaperone required for correct maturation of the 20S proteasome physical 1 1 1 Affinity Capture-RNA
SUE1 YPR151C Protein required for degradation of unstable forms of cytochrome c physical 1 1 1 Affinity Capture-RNA
SIN3 YOL004W Component of both the Rpd3S and Rpd3L histone deacetylase complexes physical 1 1 1 Affinity Capture-RNA
POR1 YNL055C Mitochondrial porin (voltage-dependent anion channel) physical 1 1 1 Affinity Capture-RNA
PPZ2 YDR436W Serine/threonine protein phosphatase Z, isoform of Ppz1p physical 1 1 1 Affinity Capture-RNA
PTC5 YOR090C Mitochondrial type 2C protein phosphatase (PP2C) physical 1 1 1 Affinity Capture-RNA
TDA9 YML081W Transcription factor that regulates acetate production physical 1 1 1 Affinity Capture-RNA
MOR1 YDR366C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YNL194C YNL194C Integral membrane protein physical 1 1 1 Affinity Capture-RNA
YML133C YML133C Putative Y' element ATP-dependent helicase physical 1 1 1 Affinity Capture-RNA
SIA1 YOR137C Protein of unassigned function physical 1 1 1 Affinity Capture-RNA
NAT4 YMR069W N alpha-acetyl-transferase physical 1 1 1 Affinity Capture-RNA
PET8 YNL003C S-adenosylmethionine transporter of the mitochondrial inner membrane physical 1 1 1 Affinity Capture-RNA
YDL206W YDL206W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
ISR1 YPR106W Predicted protein kinase physical 1 1 1 Affinity Capture-RNA
RPN13 YLR421C Subunit of the 19S regulatory particle of the 26S proteasome lid physical 1 1 1 Affinity Capture-RNA
KSP1 YHR082C Serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
YMR1 YJR110W Phosphatidylinositol 3-phosphate (PI3P) phosphatase physical 1 1 1 Affinity Capture-RNA
YPK9 YOR291W Vacuolar protein with a possible role in sequestering heavy metals physical 1 1 1 Affinity Capture-RNA
PDR12 YPL058C Plasma membrane ATP-binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
YET3 YDL072C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YPL113C YPL113C Glyoxylate reductase physical 1 1 1 Affinity Capture-RNA
NUP159 YIL115C FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
YEL075C YEL075C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
THI72 YOR192C Transporter of thiamine or related compound physical 1 1 1 Affinity Capture-RNA
PCD1 YLR151C 8-oxo-dGTP diphosphatase physical 1 1 1 Affinity Capture-RNA
MOT1 YPL082C Essential protein involved in regulation of transcription physical 1 1 1 Affinity Capture-RNA
NCA2 YPR155C Protein that regulates expression of Fo-F1 ATP synthase subunits physical 1 1 1 Affinity Capture-RNA
HPC2 YBR215W Subunit of the HIR complex physical 1 1 1 Affinity Capture-RNA
SKN1 YGR143W Protein involved in sphingolipid biosynthesis physical 1 1 1 Affinity Capture-RNA
LYS1 YIR034C Saccharopine dehydrogenase (NAD+, L-lysine-forming) physical 1 1 1 Affinity Capture-RNA
TUB4 YLR212C Gamma-tubulin physical 1 1 1 Affinity Capture-RNA
PAU4 YLR461W Member of the seripauperin multigene family physical 1 1 1 Affinity Capture-RNA
RAX1 YOR301W Protein involved in establishing bud site selection physical 1 1 1 Affinity Capture-RNA
YLR036C YLR036C Putative protein predicted to have transmembrane domains physical 1 1 1 Affinity Capture-RNA
PSD2 YGR170W Phosphatidylserine decarboxylase of the Golgi and vacuolar membranes physical 1 1 1 Affinity Capture-RNA
KAR1 YNL188W Protein involved in karyogamy and spindle pole body duplication physical 1 1 1 Affinity Capture-RNA
RXT3 YDL076C Component of the Rpd3L histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
IOC2 YLR095C Subunit of the Isw1b complex physical 1 1 1 Affinity Capture-RNA
PAU10 YDR542W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YIA6 YIL006W Mitochondrial NAD+ transporter physical 1 1 1 Affinity Capture-RNA
TFB3 YDR460W Subunit of TFIIH and nucleotide excision repair factor 3 complexes physical 1 1 1 Affinity Capture-RNA
YNG1 YOR064C Subunit of the NuA3 histone acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
SRP40 YKR092C Nucleolar serine-rich protein physical 1 1 1 Affinity Capture-RNA
MOG1 YJR074W Conserved nuclear protein that interacts with GTP-Gsp1p physical 1 1 1 Affinity Capture-RNA
LAS1 YKR063C Endonuclease involved in pre-rRNA processing at both ends of ITS2 physical 1 1 1 Affinity Capture-RNA
SIC1 YLR079W Cyclin-dependent kinase inhibitor (CKI) physical 1 1 1 Affinity Capture-RNA
PMA1 YGL008C Plasma membrane P2-type H+-ATPase physical 1 1 1 Affinity Capture-RNA
IZH4 YOL101C Membrane protein involved in zinc ion homeostasis physical 1 1 1 Affinity Capture-RNA
MNN4 YKL201C Putative positive regulator of mannosylphosphate transferase Mnn6p physical 1 1 1 Affinity Capture-RNA
RAD4 YER162C Damaged-DNA binding subunit of Nuclear Excision Repair Factor 2 physical 1 1 1 Affinity Capture-RNA
YPR084W YPR084W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YKR075C YKR075C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRPL51 YPR100W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MDL1 YLR188W Mitochondrial inner membrane half-type ABC transporter physical 1 1 1 Affinity Capture-RNA
SPT21 YMR179W Protein with a role in transcriptional silencing physical 1 1 1 Affinity Capture-RNA
MDM1 YML104C PtdIns-3-P binding protein that tethers the ER to vacuoles at NVJs physical 1 1 1 Affinity Capture-RNA
YJL027C YJL027C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
LDO16 YMR148W Protein of unknown function with possible role in spore wall assembly physical 1 1 1 Affinity Capture-RNA
OCA2 YNL056W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
NNR2 YKL151C Widely-conserved NADHX dehydratase physical 1 1 1 Affinity Capture-RNA
YPL108W YPL108W Cytoplasmic protein of unknown function physical 1 1 1 Affinity Capture-RNA
NCP1 YHR042W NADP-cytochrome P450 reductase physical 1 1 1 Affinity Capture-RNA
YER160C YER160C Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
SPC25 YER018C Component of the kinetochore-associated Ndc80 complex physical 1 1 1 Affinity Capture-RNA
VPS72 YDR485C Htz1p-binding component of the SWR1 complex physical 1 1 1 Affinity Capture-RNA
HXT15 YDL245C Putative transmembrane polyol transporter physical 1 1 1 Affinity Capture-RNA
YBL005W-A YBL005W-A Retrotransposon TYA Gag gene co-transcribed with TYB Pol physical 1 1 1 Affinity Capture-RNA
VHC1 YBR235W Vacuolar membrane cation-chloride cotransporter (CCC) physical 1 1 1 Affinity Capture-RNA
THI74 YDR438W Mitochondrial transporter repressible by thiamine physical 1 1 1 Affinity Capture-RNA
YCL042W YCL042W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YJL213W YJL213W Protein of unknown function that may interact with ribosomes physical 1 1 1 Affinity Capture-RNA
MRS6 YOR370C Rab escort protein physical 1 1 1 Affinity Capture-RNA
TIM50 YPL063W Essential component of the TIM23 complex physical 1 1 1 Affinity Capture-RNA
YNL046W YNL046W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YBL112C YBL112C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YHR078W YHR078W High osmolarity-regulated gene of unknown function physical 1 1 1 Affinity Capture-RNA
SPT8 YLR055C Subunit of the SAGA transcriptional regulatory complex physical 1 1 1 Affinity Capture-RNA
MRPL10 YNL284C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
JJJ2 YJL162C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
KTI12 YKL110C Protein that plays a role in modification of tRNA wobble nucleosides physical 1 1 1 Affinity Capture-RNA
PDR18 YNR070W Transporter of the ATP-binding cassette (ABC) family physical 1 1 1 Affinity Capture-RNA
MDM32 YOR147W Mitochondrial inner membrane protein with similarity to Mdm31p physical 1 1 1 Affinity Capture-RNA
MYO5 YMR109W One of two type I myosin motors physical 1 1 1 Affinity Capture-RNA
YML045W YML045W Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
YER138C YER138C Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
SPS1 YDR523C STE20-family GCKIII protein kinase physical 1 1 1 Affinity Capture-RNA
PIC2 YER053C Mitochondrial copper and phosphate carrier physical 1 1 1 Affinity Capture-RNA
THI7 YLR237W Plasma membrane transporter responsible for the uptake of thiamine physical 1 1 1 Affinity Capture-RNA
MBR1 YKL093W Protein involved in mitochondrial functions and stress response physical 1 1 1 Affinity Capture-RNA
YEH2 YLR020C Steryl ester hydrolase physical 1 1 1 Affinity Capture-RNA
SWM2 YNR004W Protein with a role in snRNA and snoRNA cap trimethylation physical 1 1 1 Affinity Capture-RNA
URA5 YML106W Major orotate phosphoribosyltransferase (OPRTase) isozyme physical 1 1 1 Affinity Capture-RNA
LDB18 YLL049W Component of the dynactin complex physical 1 1 1 Affinity Capture-RNA
YAR009C YAR009C Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
PHA2 YNL316C Prephenate dehydratase physical 1 1 1 Affinity Capture-RNA
HTC1 YPL067C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PAI3 YMR174C Cytoplasmic proteinase A (Pep4p) inhibitor physical 1 1 1 Affinity Capture-RNA
YOR019W YOR019W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YML039W YML039W Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
TRF5 YNL299W Non-canonical poly(A) polymerase physical 1 1 1 Affinity Capture-RNA
MIG1 YGL035C Transcription factor involved in glucose repression physical 1 1 1 Affinity Capture-RNA
MHP1 YJL042W Microtubule-associated protein involved in microtubule organization physical 1 1 1 Affinity Capture-RNA
RNQ1 YCL028W [PIN(+)] prion physical 1 1 1 Affinity Capture-RNA
YSY6 YBR162W-A Protein of unknown function physical 1 1 1 Affinity Capture-RNA
KAR9 YPL269W Spindle positioning factor physical 1 1 1 Affinity Capture-RNA
SIW14 YNL032W Inositol phosphatase involved in inositol pyrophosphate metabolism physical 1 1 1 Affinity Capture-RNA
MOT2 YER068W Ubiquitin-protein ligase subunit of the CCR4-NOT complex physical 1 1 1 Affinity Capture-RNA
PAU15 YIR041W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PDR11 YIL013C ATP-binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
SGO1 YOR073W Component of the spindle checkpoint physical 1 1 1 Affinity Capture-RNA
OPT2 YPR194C Oligopeptide transporter physical 1 1 1 Affinity Capture-RNA
RGA2 YDR379W GTPase-activating protein for polarity-establishment protein Cdc42p physical 1 1 1 Affinity Capture-RNA
YHR131C YHR131C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SOR1 YJR159W Sorbitol dehydrogenase physical 1 1 1 Affinity Capture-RNA
PGS1 YCL004W Phosphatidylglycerolphosphate synthase physical 1 1 1 Affinity Capture-RNA
YNL146W YNL146W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PXP2 YJR111C Peroxisomal matrix protein with naturally active promoter physical 1 1 1 Affinity Capture-RNA
PGU1 YJR153W Endo-polygalacturonase physical 1 1 1 Affinity Capture-RNA
YIL092W YIL092W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MAL32 YBR299W Maltase (alpha-D-glucosidase) physical 1 1 1 Affinity Capture-RNA
SLA1 YBL007C Cytoskeletal protein binding protein physical 1 1 1 Affinity Capture-RNA
NTG2 YOL043C DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase physical 1 1 1 Affinity Capture-RNA
NIS1 YNL078W Protein involved in axial bud site selection physical 1 1 1 Affinity Capture-RNA
ROT1 YMR200W Molecular chaperone involved in protein folding in ER physical 1 1 1 Affinity Capture-RNA
SSK1 YLR006C Cytoplasmic phosphorelay intermediate osmosensor and regulator physical 1 1 1 Affinity Capture-RNA
UBP7 YIL156W Ubiquitin-specific protease that cleaves ubiquitin-protein fusions physical 1 1 1 Affinity Capture-RNA
HEM1 YDR232W 5-aminolevulinate synthase physical 1 1 1 Affinity Capture-RNA
SLD7 YOR060C Protein with a role in chromosomal DNA replication physical 1 1 1 Affinity Capture-RNA
PTP3 YER075C Phosphotyrosine-specific protein phosphatase physical 1 1 1 Affinity Capture-RNA
SPT4 YGR063C Spt4p/5p (DSIF) transcription elongation factor complex subunit physical 1 1 1 Affinity Capture-RNA
YNL019C YNL019C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PDR1 YGL013C Transcription factor that regulates the pleiotropic drug response physical 1 1 1 Affinity Capture-RNA
PDR1 YGL013C Transcription factor that regulates the pleiotropic drug response genetic 1 1 1 Phenotypic Enhancement
YFL067W YFL067W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
UBP15 YMR304W Ubiquitin-specific protease involved in protein deubiquitination physical 1 1 1 Affinity Capture-RNA
RSA1 YPL193W Protein involved in the assembly of 60S ribosomal subunits physical 1 1 1 Affinity Capture-RNA
PSR2 YLR019W Putative plasma membrane phosphatase physical 1 1 1 Affinity Capture-RNA
REC107 YJR021C Protein involved in early stages of meiotic recombination physical 1 1 1 Affinity Capture-RNA
YFL065C YFL065C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YOR012W YOR012W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
NOC4 YPR144C Nucleolar protein physical 1 1 1 Affinity Capture-RNA
SCH9 YHR205W AGC family protein kinase physical 1 1 1 Affinity Capture-RNA
STP22 YCL008C Component of the ESCRT-I complex physical 1 1 1 Affinity Capture-RNA
SKI7 YOR076C GTP-binding protein that couples the Ski complex and exosome physical 1 1 1 Affinity Capture-RNA
SNZ1 YMR096W Subunit of a two-component pyridoxal-5'-phosphate synthase physical 1 1 1 Affinity Capture-RNA
RPI1 YIL119C Transcription factor, allelic differences between S288C and Sigma1278b physical 1 1 1 Affinity Capture-RNA
YPT53 YNL093W Stress-induced Rab family GTPase physical 1 1 1 Affinity Capture-RNA
RAD18 YCR066W E3 ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
MCH4 YOL119C Protein with similarity to mammalian monocarboxylate permeases physical 1 1 1 Affinity Capture-RNA
YRF1-2 YER190W Helicase encoded by the Y' element of subtelomeric regions physical 1 1 1 Affinity Capture-RNA
MRX21 YPR011C Mitochondrial transporter physical 1 1 1 Affinity Capture-RNA
NUT1 YGL151W Component of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
VPS41 YDR080W Subunit of the HOPS endocytic tethering complex physical 1 1 1 Affinity Capture-RNA
ROQ1 YJL144W Ub-ligase substrate-specificity factor physical 1 1 1 Affinity Capture-RNA
MRPS12 YNR036C Mitochondrial protein physical 1 1 1 Affinity Capture-RNA
WAR1 YML076C Homodimeric Zn2Cys6 zinc finger transcription factor physical 1 1 1 Affinity Capture-RNA
RIM13 YMR154C Calpain-like cysteine protease physical 1 1 1 Affinity Capture-RNA
PKH3 YDR466W Protein kinase with similarity to mammalian PDK1 and yeast Pkh1p/Phk2p physical 1 1 1 Affinity Capture-RNA
STE7 YDL159W Signal transducing MAP kinase kinase physical 1 1 1 Affinity Capture-RNA
RAD10 YML095C Single-stranded DNA endonuclease (with Rad1p) physical 1 1 1 Affinity Capture-RNA
NEW1 YPL226W Translation termination and ribosome biogenesis factor physical 1 1 1 Affinity Capture-RNA
YAT1 YAR035W Outer mitochondrial carnitine acetyltransferase physical 1 1 1 Affinity Capture-RNA
UIP5 YKR044W Protein of unknown function that interacts with Ulp1p physical 1 1 1 Affinity Capture-RNA
YDL199C YDL199C Putative transporter physical 1 1 1 Affinity Capture-RNA
VBA2 YBR293W Permease of basic amino acids in the vacuolar membrane physical 1 1 1 Affinity Capture-RNA
PAU8 YAL068C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YSP3 YOR003W Putative precursor of the subtilisin-like protease III physical 1 1 1 Affinity Capture-RNA
YRM1 YOR172W Zinc finger transcription factor involved in multidrug resistance physical 1 1 1 Affinity Capture-RNA
RSE1 YML049C Protein involved in pre-mRNA splicing physical 1 1 1 Affinity Capture-RNA
PAU13 YHL046C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SDD2 YMR074C Protein with homology to human PDCD5 physical 1 1 1 Affinity Capture-RNA
IKI3 YLR384C Subunit of Elongator complex physical 1 1 1 Affinity Capture-RNA
HSL1 YKL101W Nim1p-related protein kinase physical 1 1 1 Affinity Capture-RNA
OXP1 YKL215C 5-oxoprolinase physical 1 1 1 Affinity Capture-RNA
KAR3 YPR141C Minus-end-directed microtubule motor physical 1 1 1 Affinity Capture-RNA
SIS2 YKR072C Negative regulatory subunit of protein phosphatase 1 (Ppz1p) physical 1 1 1 Affinity Capture-RNA
SUP35 YDR172W Translation termination factor eRF3 physical 1 1 1 Affinity Capture-RNA
OAF1 YAL051W Oleate-activated transcription factor physical 1 1 1 Affinity Capture-RNA
OXR1 YPL196W Protein involved in regulation of vacuolar V-ATPase physical 1 1 1 Affinity Capture-RNA
PDR10 YOR328W ATP-binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
MPH2 YDL247W Alpha-glucoside permease physical 1 1 1 Affinity Capture-RNA
YNL033W YNL033W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YPR089W YPR089W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YFL068W YFL068W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MLC2 YPR188C Regulatory light chain for the type II myosin Myo1p physical 1 1 1 Affinity Capture-RNA
PLM2 YDR501W Putative transcription factor, contains Forkhead Associated domain physical 1 1 1 Affinity Capture-RNA
PTC6 YCR079W Mitochondrial type 2C protein phosphatase (PP2C) physical 1 1 1 Affinity Capture-RNA
LSP1 YPL004C Eisosome core component physical 1 1 1 Affinity Capture-RNA
TSR3 YOR006C Protein required for 20S pre-rRNA processing physical 1 1 1 Affinity Capture-RNA
PUN1 YLR414C Plasma membrane protein with a role in cell wall integrity physical 1 1 1 Affinity Capture-RNA
YMR090W YMR090W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PTA1 YAL043C Subunit of holo-CPF physical 1 1 1 Affinity Capture-RNA
IDP3 YNL009W Peroxisomal NADP-dependent isocitrate dehydrogenase physical 1 1 1 Affinity Capture-RNA
VFA1 YER128W Protein that interacts with Vps4p and has a role in vacuolar sorting physical 1 1 1 Affinity Capture-RNA
PKH2 YOL100W Serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
RPS0B YLR048W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPL43B YJR094W-A Ribosomal 60S subunit protein L43B physical 1 1 1 Affinity Capture-RNA
PHO85 YPL031C Cyclin-dependent kinase physical 1 1 1 Biochemical Activity
HHT1 YBR010W Histone H3 physical 1 1 1 Affinity Capture-MS
HHT2 YNL031C Histone H3 physical 1 1 1 Affinity Capture-MS
HTA1 YDR225W Histone H2A physical 1 1 1 Affinity Capture-MS
HTA2 YBL003C Histone H2A physical 1 1 1 Affinity Capture-MS
HTB1 YDR224C Histone H2B physical 1 1 1 Affinity Capture-MS
HTB2 YBL002W Histone H2B physical 1 1 1 Affinity Capture-MS
VPS20 YMR077C Myristoylated subunit of the ESCRT-III complex physical 1 1 1 Two-hybrid
SSB2 YNL209W Cytoplasmic ATPase that is a ribosome-associated molecular chaperone physical 1 1 1 Co-purification
TOM1 YDR457W E3 ubiquitin ligase of the hect-domain class physical 1 1 1 Affinity Capture-MS
RPB3 YIL021W RNA polymerase II third largest subunit B44 physical 1 1 1 Affinity Capture-MS
TMA46 YOR091W Protein of unknown function that associates with translating ribosomes physical 1 1 1 Affinity Capture-MS
UBC9 YDL064W SUMO-conjugating enzyme involved in the Smt3p conjugation pathway physical 1 1 1 Biochemical Activity
TFC6 YDR362C Subunit of RNA polymerase III transcription initiation factor complex physical 1 1 1 Affinity Capture-MS
LTE1 YAL024C Protein similar to GDP/GTP exchange factors genetic 1 1 1 Synthetic Growth Defect
SIR1 YKR101W Protein involved in silencing at mating-type loci HML and HMR genetic 1 1 1 Phenotypic Suppression
KAR2 YJL034W ATPase involved in protein import into the ER genetic 1 1 1 Positive Genetic
NPT1 YOR209C Nicotinate phosphoribosyltransferase genetic 1 1 1 Synthetic Growth Defect
RAD27 YKL113C 5' to 3' exonuclease, 5' flap endonuclease genetic 1 1 1 Synthetic Growth Defect
LRG1 YDL240W GTPase-activating protein (GAP) genetic 1 1 1 Dosage Rescue
ROM1 YGR070W Guanine nucleotide exchange factor (GEF) for Rho1p genetic 1 1 1 Synthetic Growth Defect
HSC82 YMR186W Cytoplasmic chaperone of the Hsp90 family genetic 1 1 1 Synthetic Growth Defect
HSP82 YPL240C Hsp90 chaperone genetic 1 1 1 Synthetic Growth Defect
TEL2 YGR099W Subunit of the ASTRA complex, involved in chromatin remodeling genetic 1 1 1 Positive Genetic
PBP1 YGR178C Component of glucose deprivation induced stress granules genetic 1 1 1 Synthetic Growth Defect
POP1 YNL221C Subunit of RNase MRP, nuclear RNase P and telomerase complexes genetic 1 1 1 Synthetic Growth Defect
SLT2 YHR030C Serine/threonine MAP kinase genetic 1 1 1 Phenotypic Suppression
RHO1 YPR165W GTP-binding protein of the rho subfamily of Ras-like proteins genetic 1 1 1 Dosage Rescue
PKC1 YBL105C Protein serine/threonine kinase genetic 1 1 1 Dosage Rescue
PBR1 YNL181W Putative oxidoreductase genetic 1 1 1 Positive Genetic
YPR172W YPR172W Protein of unknown function genetic 1 1 1 Positive Genetic
UTP7 YER082C Nucleolar protein genetic 1 1 1 Negative Genetic
SMD2 YLR275W Core Sm protein Sm D2 genetic 1 1 1 Negative Genetic
KRI1 YNL308C Essential nucleolar protein required for 40S ribosome biogenesis genetic 1 1 1 Negative Genetic
RFA2 YNL312W Subunit of heterotrimeric Replication Protein A (RPA) genetic 1 1 1 Negative Genetic
YTM1 YOR272W Ribosomal assembly factor and 66S pre-ribosomal particle constituent genetic 1 1 1 Negative Genetic
SEC8 YPR055W Essential 121 kDa subunit of the exocyst complex genetic 1 1 1 Negative Genetic
MNN10 YDR245W Subunit of a Golgi mannosyltransferase complex genetic 1 1 1 Negative Genetic
MAL33 YBR297W MAL-activator protein genetic 1 1 1 Negative Genetic
YDL114W YDL114W Putative short-chain dehydrogenase/reductase genetic 1 1 1 Negative Genetic
RSM28 YDR494W Mitochondrial ribosomal protein of the small subunit genetic 1 1 1 Negative Genetic
PPE1 YHR075C Protein with carboxyl methyl esterase activity genetic 1 1 1 Negative Genetic
RIC1 YLR039C Protein involved in retrograde transport to the cis-Golgi network genetic 1 1 1 Negative Genetic
NAM7 YMR080C ATP-dependent RNA helicase of the SFI superfamily genetic 1 1 1 Negative Genetic
YMR315W YMR315W Protein with NADP(H) oxidoreductase activity genetic 1 1 1 Negative Genetic
MRPL17 YNL252C Mitochondrial ribosomal protein of the large subunit genetic 1 1 1 Negative Genetic
YNL320W YNL320W Putative protein of unknown function genetic 1 1 1 Negative Genetic
THI21 YPL258C Hydroxymethylpyrimidine (HMP) and HMP-phosphate kinase genetic 1 1 1 Negative Genetic
BOI1 YBL085W Protein involved in polar growth, functionally redundant with Boi2p physical 1 1 1 Affinity Capture-RNA
DIA4 YHR011W Probable mitochondrial seryl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
GPH1 YPR160W Glycogen phosphorylase required for the mobilization of glycogen physical 1 1 1 Affinity Capture-RNA
CRZ1 YNL027W Transcription factor, activates transcription of stress response genes physical 1 1 1 Affinity Capture-RNA
BBC1 YJL020C Protein possibly involved in assembly of actin patches physical 1 1 1 Affinity Capture-RNA
FET4 YMR319C Low-affinity Fe(II) transporter of the plasma membrane physical 1 1 1 Affinity Capture-RNA
FAR7 YFR008W Protein involved in recovery from pheromone-induced cell cycle arrest physical 1 1 1 Affinity Capture-RNA
DMA2 YNL116W Ubiquitin-protein ligase (E3) physical 1 1 1 Affinity Capture-RNA
CNB1 YKL190W Calcineurin B physical 1 1 1 Affinity Capture-RNA
GRR1 YJR090C F-box protein component of an SCF ubiquitin-ligase complex physical 1 1 1 Affinity Capture-RNA
FET3 YMR058W Ferro-O2-oxidoreductase physical 1 1 1 Affinity Capture-RNA
ESL2 YKR096W hEST1A/B (SMG5/6)-like protein physical 1 1 1 Affinity Capture-RNA
BOL2 YGL220W Cytosolic protein involved in repression of iron regulon transcription physical 1 1 1 Affinity Capture-RNA
BFA1 YJR053W Subunit of a two-component GTPase-activating protein, Bfa1p-Bub2p physical 1 1 1 Affinity Capture-RNA
CAF120 YNL278W Part of the CCR4-NOT transcriptional regulatory complex physical 1 1 1 Affinity Capture-RNA
GPD2 YOL059W NAD-dependent glycerol 3-phosphate dehydrogenase physical 1 1 1 Affinity Capture-RNA
FAR1 YJL157C CDK inhibitor and nuclear anchor physical 1 1 1 Affinity Capture-RNA
CYC8 YBR112C General transcriptional co-repressor physical 1 1 1 Affinity Capture-RNA
CBK1 YNL161W Serine/threonine protein kinase of the the RAM signaling network physical 1 1 1 Affinity Capture-RNA
DMC1 YER179W Meiosis-specific recombinase required for double-strand break repair physical 1 1 1 Affinity Capture-RNA
DSS1 YMR287C 3'-5' exoribonuclease physical 1 1 1 Affinity Capture-RNA
ELA1 YNL230C Elongin A physical 1 1 1 Affinity Capture-RNA
CDC20 YGL116W Activator of anaphase-promoting complex/cyclosome (APC/C) genetic 1 1 1 Negative Genetic
GIP2 YER054C Putative regulatory subunit of protein phosphatase Glc7p physical 1 1 1 Affinity Capture-RNA
GDB1 YPR184W Glycogen debranching enzyme physical 1 1 1 Affinity Capture-RNA
COS111 YBR203W Protein required for antifungal drug ciclopirox olamine resistance physical 1 1 1 Affinity Capture-RNA
GAC1 YOR178C Regulatory subunit for Glc7p type-1 protein phosphatase (PP1) physical 1 1 1 Affinity Capture-RNA
DMA1 YHR115C Ubiquitin-protein ligase (E3) physical 1 1 1 Affinity Capture-RNA
GID8 YMR135C Subunit of GID Complex, binds strongly to central component Vid30p physical 1 1 1 Affinity Capture-RNA
DSK2 YMR276W Nuclear-enriched ubiquitin-like polyubiquitin-binding protein physical 1 1 1 Affinity Capture-RNA
BUL1 YMR275C Alpha-arrestin, component of the Rsp5p E3-ubiquitin ligase complex physical 1 1 1 Affinity Capture-RNA
BEM3 YPL115C Rho GTPase activating protein (RhoGAP) physical 1 1 1 Affinity Capture-RNA
CDC15 YAR019C Hippo-like kinase of the Mitotic Exit Network physical 1 1 1 Affinity Capture-RNA
GIS4 YML006C CAAX box containing protein of unknown function physical 1 1 1 Affinity Capture-RNA
CWC21 YDR482C Protein involved in RNA splicing by the spliceosome physical 1 1 1 Affinity Capture-RNA
CHS1 YNL192W Chitin synthase I physical 1 1 1 Affinity Capture-RNA
DPB11 YJL090C DNA replication initiation protein physical 1 1 1 Affinity Capture-RNA
BCK2 YER167W Serine/threonine-rich protein involved in PKC1 signaling pathway physical 1 1 1 Affinity Capture-RNA
FPK1 YNR047W Ser/Thr protein kinase physical 1 1 1 Affinity Capture-RNA
BUD9 YGR041W Protein involved in bud-site selection physical 1 1 1 Affinity Capture-RNA
ECM33 YBR078W GPI-anchored protein involved in efficient glucose uptake physical 1 1 1 Affinity Capture-RNA
CLB2 YPR119W B-type cyclin involved in cell cycle progression physical 1 1 1 Affinity Capture-RNA
AHC1 YOR023C Subunit of the Ada histone acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
FKH2 YNL068C Forkhead family transcription factor physical 1 1 1 Affinity Capture-RNA
EAP1 YKL204W eIF4E-associated protein, competes with eIF4G for binding to eIF4E physical 1 1 1 Affinity Capture-RNA
CPA1 YOR303W Small subunit of carbamoyl phosphate synthetase physical 1 1 1 Affinity Capture-RNA
DEF1 YKL054C RNAPII degradation factor physical 1 1 1 Affinity Capture-RNA
CLN2 YPL256C G1 cyclin involved in regulation of the cell cycle physical 1 1 1 Affinity Capture-RNA
CIN5 YOR028C Basic leucine zipper (bZIP) transcription factor of the yAP-1 family physical 1 1 1 Affinity Capture-RNA
FMP48 YGR052W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
ESS1 YJR017C Peptidylprolyl-cis/trans-isomerase (PPIase) genetic 1 1 1 Negative Genetic
ASI3 YNL008C Subunit of the inner nuclear membrane Asi ubiquitin ligase complex physical 1 1 1 Affinity Capture-RNA
CTK3 YML112W Gamma subunit of C-terminal domain kinase I physical 1 1 1 Affinity Capture-RNA
DID4 YKL002W Class E Vps protein of the ESCRT-III complex physical 1 1 1 Affinity Capture-RNA
ATG1 YGL180W Protein serine/threonine kinase physical 1 1 1 Biochemical Activity
ATG13 YPR185W Regulatory subunit of the Atg1p signaling complex physical 1 1 1 Affinity Capture-RNA
CIN4 YMR138W GTP-binding protein involved in beta-tubulin (Tub2p) folding physical 1 1 1 Affinity Capture-RNA
CLN3 YAL040C G1 cyclin involved in cell cycle progression physical 1 1 1 Affinity Capture-RNA
DAL82 YNL314W Positive regulator of allophanate inducible genes physical 1 1 1 Affinity Capture-RNA
ECM19 YLR390W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
GFD1 YMR255W Coiled-coiled protein of unknown function physical 1 1 1 Affinity Capture-RNA
AFT1 YGL071W Transcription factor involved in iron utilization and homeostasis physical 1 1 1 Affinity Capture-RNA
GTR1 YML121W Subunit of a TORC1-stimulating GTPase and the EGO/GSE complex physical 1 1 1 Affinity Capture-RNA
GZF3 YJL110C GATA zinc finger protein physical 1 1 1 Affinity Capture-RNA
GDS1 YOR355W Protein involved in histone H4 acetylation at ribosomal protein genes physical 1 1 1 Affinity Capture-RNA
GCN4 YEL009C bZIP transcriptional activator of amino acid biosynthetic genes physical 1 1 1 Affinity Capture-RNA
GCN4 YEL009C bZIP transcriptional activator of amino acid biosynthetic genes genetic 1 1 1 Positive Genetic
HAA1 YPR008W Transcriptional activator involved in adaptation to weak acid stress physical 1 1 1 Affinity Capture-RNA
ALY2 YJL084C Alpha arrestin, Ub-ligase adaptor for Rsp5p physical 1 1 1 Affinity Capture-RNA
CLG1 YGL215W Cyclin-like protein that interacts with Pho85p physical 1 1 1 Affinity Capture-RNA
ACA1 YER045C ATF/CREB family basic leucine zipper (bZIP) transcription factor physical 1 1 1 Affinity Capture-RNA
AIM3 YBR108W Protein that inhibits barbed-end actin filament elongation physical 1 1 1 Affinity Capture-RNA
GNP1 YDR508C Broad specificity amino acid permease physical 1 1 1 Affinity Capture-RNA
AIM18 YHR198C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
CTL1 YMR180C RNA 5'-triphosphatase, localizes to both the nucleus and cytoplasm physical 1 1 1 Affinity Capture-RNA
GPI16 YHR188C Subunit of the glycosylphosphatidylinositol transamidase complex physical 1 1 1 Affinity Capture-RNA
ESL1 YIL151C hEST1A/B (SMG5/6)-like protein physical 1 1 1 Affinity Capture-RNA
CUE2 YKL090W Ubiquitin-binding endonuclease involved in mRNA decay physical 1 1 1 Affinity Capture-RNA
ASK10 YGR097W Regulator of the Fps1p glycerol channel physical 1 1 1 Affinity Capture-RNA
ELP6 YMR312W Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex physical 1 1 1 Affinity Capture-RNA
COG1 YGL223C Essential component of the conserved oligomeric Golgi complex physical 1 1 1 Affinity Capture-RNA
GIP3 YPL137C Cytoplasmic protein that regulates protein phosphatase 1 Glc7p physical 1 1 1 Affinity Capture-RNA
GCR1 YPL075W Transcriptional activator of genes involved in glycolysis physical 1 1 1 Affinity Capture-RNA
BUD5 YCR038C GTP/GDP exchange factor for Rsr1p (Bud1p) physical 1 1 1 Affinity Capture-RNA
BUR6 YER159C Subunit of a heterodimeric NC2 transcription regulator complex physical 1 1 1 Affinity Capture-RNA
ALF1 YNL148C Alpha-tubulin folding protein physical 1 1 1 Affinity Capture-RNA
BFR1 YOR198C Component of mRNP complexes associated with polyribosomes physical 1 1 1 Affinity Capture-RNA
BRN1 YBL097W Subunit of the condensin complex physical 1 1 1 Affinity Capture-RNA
DBF4 YDR052C Regulatory subunit of Cdc7p-Dbf4p kinase complex physical 1 1 1 Affinity Capture-RNA
FIG4 YNL325C Phosphatidylinositol 3,5-bisphosphate (PtdIns[3,5]P) phosphatase physical 1 1 1 Affinity Capture-RNA
CST9 YLR394W SUMO E3 ligase physical 1 1 1 Affinity Capture-RNA
CIN1 YOR349W Tubulin folding factor D involved in beta-tubulin (Tub2p) folding physical 1 1 1 Affinity Capture-RNA
HAP1 YLR256W Zinc finger transcription factor physical 1 1 1 Affinity Capture-RNA
GAL4 YPL248C DNA-binding transcription factor required for activating GAL genes physical 1 1 1 Affinity Capture-RNA
EMP46 YLR080W Integral membrane component of ER-derived COPII-coated vesicles physical 1 1 1 Affinity Capture-RNA
GLN3 YER040W Transcriptional activator in nitrogen catabolite repression system physical 1 1 1 Affinity Capture-RNA
HAP4 YKL109W Transcription factor physical 1 1 1 Affinity Capture-RNA
BAG7 YOR134W Rho GTPase activating protein (RhoGAP) physical 1 1 1 Affinity Capture-RNA
GAL10 YBR019C UDP-glucose-4-epimerase physical 1 1 1 Affinity Capture-RNA
GYP1 YOR070C Cis-golgi GTPase-activating protein (GAP) for yeast Rabs physical 1 1 1 Affinity Capture-RNA
GAL80 YML051W Transcriptional regulator involved in the repression of GAL genes physical 1 1 1 Affinity Capture-RNA
ABF1 YKL112W DNA binding protein with possible chromatin-reorganizing activity physical 1 1 1 Affinity Capture-RNA
CCS1 YMR038C Copper chaperone for superoxide dismutase Sod1p physical 1 1 1 Affinity Capture-RNA
ERG25 YGR060W C-4 methyl sterol oxidase physical 1 1 1 Affinity Capture-RNA
ATC1 YDR184C Nuclear protein physical 1 1 1 Affinity Capture-RNA
ALY1 YKR021W Alpha arrestin, substrate of calcineurin physical 1 1 1 Affinity Capture-RNA
ECM27 YJR106W Protein involved in calcium homeostasis and exit from quiescence physical 1 1 1 Affinity Capture-RNA
GIC2 YDR309C Rho-family GTPase interacting protein and Cdc42p effector physical 1 1 1 Affinity Capture-RNA
GPR1 YDL035C Plasma membrane G protein coupled receptor (GPCR) physical 1 1 1 Affinity Capture-RNA
DPC29 YGR021W Putative mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
GYL1 YMR192W Putative GTPase activating protein (GAP) with a role in exocytosis physical 1 1 1 Affinity Capture-RNA
ARK1 YNL020C Ser/Thr protein kinase physical 1 1 1 Affinity Capture-RNA
AZF1 YOR113W Zinc-finger transcription factor physical 1 1 1 Affinity Capture-RNA
ATP10 YLR393W Assembly factor for the F0 sector of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
CLA4 YNL298W Cdc42p-activated signal transducing kinase physical 1 1 1 Affinity Capture-RNA
ACF2 YLR144C Intracellular beta-1,3-endoglucanase physical 1 1 1 Affinity Capture-RNA
ENT2 YLR206W Epsin-like protein required for endocytosis and actin patch assembly physical 1 1 1 Affinity Capture-RNA
FUS1 YCL027W Membrane protein localized to the shmoo tip physical 1 1 1 Affinity Capture-RNA
GAT1 YFL021W Transcriptional activator of nitrogen catabolite repression genes physical 1 1 1 Affinity Capture-RNA
COX17 YLL009C Copper metallochaperone that transfers copper to Sco1p and Cox11p physical 1 1 1 Affinity Capture-RNA
ERT1 YBR239C Transcriptional regulator physical 1 1 1 Affinity Capture-RNA
CYB2 YML054C Cytochrome b2 (L-lactate cytochrome-c oxidoreductase) physical 1 1 1 Affinity Capture-RNA
CAP2 YIL034C Beta subunit of the capping protein heterodimer (Cap1p and Cap2p) physical 1 1 1 Affinity Capture-RNA
ENV11 YGR071C Protein proposed to be involved in vacuolar functions physical 1 1 1 Affinity Capture-RNA
ARL3 YPL051W ARF-like small GTPase of the RAS superfamily physical 1 1 1 Affinity Capture-RNA
ERF2 YLR246W Subunit of a palmitoyltransferase physical 1 1 1 Affinity Capture-RNA
HBT1 YDL223C Shmoo tip protein, substrate of Hub1p ubiquitin-like protein physical 1 1 1 Affinity Capture-RNA
DBP6 YNR038W Essential protein involved in ribosome biogenesis physical 1 1 1 Affinity Capture-RNA
CBP1 YJL209W Mitochondrial protein, regulator of COB mRNA stability and translation physical 1 1 1 Affinity Capture-RNA
FLO8 YER109C Transcription factor physical 1 1 1 Affinity Capture-RNA
ASG1 YIL130W Zinc cluster protein proposed to be a transcriptional regulator physical 1 1 1 Affinity Capture-RNA
CRF1 YDR223W Transcriptional corepressor physical 1 1 1 Affinity Capture-RNA
GAB1 YLR459W Subunit of the glycosylphosphatidylinositol transamidase complex physical 1 1 1 Affinity Capture-RNA
DPM1 YPR183W Dolichol phosphate mannose (Dol-P-Man) synthase of ER membrane physical 1 1 1 Affinity Capture-RNA
ERG5 YMR015C C-22 sterol desaturase physical 1 1 1 Affinity Capture-RNA
BOP3 YNL042W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
AIM44 YPL158C Regulator of Cdc42p and Rho1p physical 1 1 1 Affinity Capture-RNA
ECM21 YBL101C Alpha-arrestin, ubiquitin ligase adaptor for Rsp5p physical 1 1 1 Affinity Capture-RNA
AUS1 YOR011W Plasma membrane sterol transporter of the ATP-binding cassette family physical 1 1 1 Affinity Capture-RNA
EPO1 YMR124W Protein involved in septin-ER tethering physical 1 1 1 Affinity Capture-RNA
GTA1 YEL043W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
CPS1 YJL172W Vacuolar carboxypeptidase S physical 1 1 1 Affinity Capture-RNA
HCM1 YCR065W Forkhead transcription factor physical 1 1 1 Affinity Capture-RNA
ASF2 YDL197C Anti-silencing protein physical 1 1 1 Affinity Capture-RNA
FRK1 YPL141C Protein kinase of unknown cellular role physical 1 1 1 Affinity Capture-RNA
EGT2 YNL327W Glycosylphosphatidylinositol (GPI)-anchored cell wall endoglucanase physical 1 1 1 Affinity Capture-RNA
GTB1 YDR221W Glucosidase II beta subunit, forms a complex with alpha subunit Rot2p physical 1 1 1 Affinity Capture-RNA
GAT2 YMR136W Protein containing GATA family zinc finger motifs physical 1 1 1 Affinity Capture-RNA
GPI2 YPL076W Protein involved in the synthesis of GlcNAc-PI physical 1 1 1 Affinity Capture-RNA
GPI2 YPL076W Protein involved in the synthesis of GlcNAc-PI genetic 1 1 1 Negative Genetic
DSF2 YBR007C Deletion suppressor of mpt5 mutation physical 1 1 1 Affinity Capture-RNA
GAS5 YOL030W 1,3-beta-glucanosyltransferase physical 1 1 1 Affinity Capture-RNA
ATP14 YLR295C Subunit h of the F0 sector of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
GLO4 YOR040W Mitochondrial glyoxalase II physical 1 1 1 Affinity Capture-RNA
DSE4 YNR067C Daughter cell-specific secreted protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
ACP1 YKL192C Mitochondrial matrix acyl carrier protein physical 1 1 1 Affinity Capture-RNA
BRL1 YHR036W Essential nuclear envelope/ER integral membrane protein physical 1 1 1 Affinity Capture-RNA
FCY21 YER060W Putative purine-cytosine permease physical 1 1 1 Affinity Capture-RNA
ARA2 YMR041C NAD-dependent arabinose dehydrogenase physical 1 1 1 Affinity Capture-RNA
FIG2 YCR089W Cell wall adhesin, expressed specifically during mating physical 1 1 1 Affinity Capture-RNA
CSR1 YLR380W Phosphatidylinositol transfer protein physical 1 1 1 Affinity Capture-RNA
ADH7 YCR105W NADPH-dependent medium chain alcohol dehydrogenase physical 1 1 1 Affinity Capture-RNA
ELF1 YKL160W Transcription elongation factor with a conserved zinc finger domain physical 1 1 1 Affinity Capture-RNA
AIM26 YKL037W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ECM3 YOR092W Non-essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
FLO11 YIR019C GPI-anchored cell surface glycoprotein (flocculin) physical 1 1 1 Affinity Capture-RNA
EFM6 YNL024C Putative S-adenosylmethionine-dependent lysine methyltransferase physical 1 1 1 Affinity Capture-RNA
GTT3 YEL017W Protein of unknown function may be involved in glutathione metabolism physical 1 1 1 Affinity Capture-RNA
GIP4 YAL031C Cytoplasmic protein that regulates protein phosphatase 1 Glc7p physical 1 1 1 Affinity Capture-RNA
CSS1 YIL169C Protein of unknown function, secreted when constitutively expressed physical 1 1 1 Affinity Capture-RNA
FAS1 YKL182W Beta subunit of fatty acid synthetase physical 1 1 1 Affinity Capture-RNA
ALT1 YLR089C Alanine transaminase (glutamic pyruvic transaminase) physical 1 1 1 Affinity Capture-RNA
GEP5 YLR091W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
CSA1 YPR174C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
DOS2 YDR068W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
BST1 YFL025C GPI inositol deacylase of the endoplasmic reticulum (ER) physical 1 1 1 Affinity Capture-RNA
AVT3 YKL146W Vacuolar transporter physical 1 1 1 Affinity Capture-RNA
CCW22 YDR134C Cell wall protein physical 1 1 1 Affinity Capture-RNA
CMR3 YPR013C Putative zinc finger protein physical 1 1 1 Affinity Capture-RNA
FPS1 YLL043W Aquaglyceroporin, plasma membrane channel physical 1 1 1 Affinity Capture-RNA
CTH1 YDR151C mRNA binding protein, member of the CCCH zinc finger family physical 1 1 1 Affinity Capture-RNA
ABM1 YJR108W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
DGA1 YOR245C Diacylglycerol acyltransferase physical 1 1 1 Affinity Capture-RNA
DIF1 YLR437C Protein that regulates nuclear import of Rnr2p and Rnr4p physical 1 1 1 Affinity Capture-RNA
EMC4 YGL231C Member of conserved ER transmembrane complex physical 1 1 1 Affinity Capture-RNA
GUP1 YGL084C Plasma membrane protein involved in remodeling GPI anchors physical 1 1 1 Affinity Capture-RNA
GAS3 YMR215W Putative 1,3-beta-glucanosyltransferase physical 1 1 1 Affinity Capture-RNA
ECM22 YLR228C Sterol regulatory element binding protein physical 1 1 1 Affinity Capture-RNA
CHS7 YHR142W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ALG6 YOR002W ER-luminal alpha 1,3 glucosyltransferase physical 1 1 1 Affinity Capture-RNA
EOS1 YNL080C Protein involved in N-glycosylation genetic 1 1 1 Negative Genetic
ATR1 YML116W Multidrug efflux pump of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
DNF2 YDR093W Aminophospholipid translocase (flippase) physical 1 1 1 Affinity Capture-RNA
GIS1 YDR096W Histone demethylase and transcription factor physical 1 1 1 Affinity Capture-RNA
EST2 YLR318W Reverse transcriptase subunit of the telomerase holoenzyme physical 1 1 1 Affinity Capture-RNA
ECL1 YGR146C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
CRH1 YGR189C Chitin transglycosylase physical 1 1 1 Affinity Capture-RNA
BXI1 YNL305C Protein involved in apoptosis physical 1 1 1 Affinity Capture-RNA
ENA2 YDR039C P-type ATPase sodium pump physical 1 1 1 Affinity Capture-RNA
ENA5 YDR038C Protein with similarity to P-type ATPase sodium pumps physical 1 1 1 Affinity Capture-RNA
DFG16 YOR030W Probable multiple transmembrane protein physical 1 1 1 Affinity Capture-RNA
ECM13 YBL043W Non-essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
CIS3 YJL158C Mannose-containing glycoprotein constituent of the cell wall physical 1 1 1 Affinity Capture-RNA
BSC1 YDL037C Protein of unconfirmed function physical 1 1 1 Affinity Capture-RNA
ALG12 YNR030W Alpha-1,6-mannosyltransferase localized to the ER physical 1 1 1 Affinity Capture-RNA
ERG29 YMR134W Protein of unknown function involved in ergosterol biosynthesis physical 1 1 1 Affinity Capture-RNA
GPI13 YLL031C ER membrane localized phosphoryltransferase physical 1 1 1 Affinity Capture-RNA
ERG3 YLR056W C-5 sterol desaturase physical 1 1 1 Affinity Capture-RNA
CDS1 YBR029C Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase) physical 1 1 1 Affinity Capture-RNA
GPC1 YGR149W Glycerophosphocholine acyltransferase (GPCAT) physical 1 1 1 Affinity Capture-RNA
FLO5 YHR211W Lectin-like cell wall protein (flocculin) involved in flocculation physical 1 1 1 Affinity Capture-RNA
DSE2 YHR143W Daughter cell-specific secreted protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
FIT2 YOR382W Mannoprotein that is incorporated into the cell wall physical 1 1 1 Affinity Capture-RNA
EDC1 YGL222C RNA-binding protein that activates mRNA decapping directly physical 1 1 1 Affinity Capture-RNA
DAT1 YML113W DNA binding protein that recognizes oligo(dA).oligo(dT) tracts physical 1 1 1 Affinity Capture-RNA
AGA2 YGL032C Adhesion subunit of a-agglutinin of a-cells physical 1 1 1 Affinity Capture-RNA
CSI2 YOL007C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
AFB1 YLR040C MATalpha-specific a-factor blocker physical 1 1 1 Affinity Capture-RNA
CTS1 YLR286C Endochitinase physical 1 1 1 Affinity Capture-RNA
DAN4 YJR151C Cell wall mannoprotein physical 1 1 1 Affinity Capture-RNA
FLO1 YAR050W Lectin-like protein involved in flocculation physical 1 1 1 Affinity Capture-RNA
DFG10 YIL049W Probable polyprenol reductase physical 1 1 1 Affinity Capture-RNA
GCG1 YER163C Gamma-glutamyl cyclotransferase physical 1 1 1 Affinity Capture-RNA
GPI18 YBR004C Functional ortholog of human PIG-V physical 1 1 1 Affinity Capture-RNA
FRE5 YOR384W Putative ferric reductase with similarity to Fre2p physical 1 1 1 Affinity Capture-RNA
FIT3 YOR383C Mannoprotein that is incorporated into the cell wall physical 1 1 1 Affinity Capture-RNA
FLO9 YAL063C Lectin-like protein with similarity to Flo1p physical 1 1 1 Affinity Capture-RNA
DDL1 YOR022C DDHD domain-containing phospholipase A1 physical 1 1 1 Affinity Capture-RNA
EDS1 YBR033W Putative zinc cluster protein, predicted to be a transcription factor physical 1 1 1 Affinity Capture-RNA
FCY22 YER060W-A Putative purine-cytosine permease physical 1 1 1 Affinity Capture-RNA
ATG41 YPL250C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
DIT1 YDR403W Sporulation-specific enzyme required for spore wall maturation physical 1 1 1 Affinity Capture-RNA
FLC3 YGL139W Putative FAD transporter, similar to Flc1p and Flc2p physical 1 1 1 Affinity Capture-RNA
CWC27 YPL064C Component of a complex containing Cef1p physical 1 1 1 Affinity Capture-RNA
EMI1 YDR512C Non-essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
FIT1 YDR534C Mannoprotein that is incorporated into the cell wall physical 1 1 1 Affinity Capture-RNA
FEX1 YOR390W Protein involved in fluoride export physical 1 1 1 Affinity Capture-RNA
FRE6 YLL051C Putative ferric reductase with similarity to Fre2p physical 1 1 1 Affinity Capture-RNA
FEX2 YPL279C Protein involved in fluoride export physical 1 1 1 Affinity Capture-RNA
BRE4 YDL231C Zinc finger protein containing five transmembrane domains physical 1 1 1 Affinity Capture-RNA
FKS3 YMR306W Protein involved in spore wall assembly physical 1 1 1 Affinity Capture-RNA
BSC4 YNL269W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
DIE2 YGR227W Dolichyl-phosphoglucose-dependent alpha-1,2-glucosyltransferase physical 1 1 1 Affinity Capture-RNA
DIE2 YGR227W Dolichyl-phosphoglucose-dependent alpha-1,2-glucosyltransferase genetic 1 1 1 Negative Genetic
AFT2 YPL202C Iron-regulated transcriptional activator physical 1 1 1 Affinity Capture-RNA
BOR1 YNL275W Boron efflux transporter of the plasma membrane physical 1 1 1 Affinity Capture-RNA
EMA19 YLR050C Integral ER membrane protein involved in protein sorting physical 1 1 1 Affinity Capture-RNA
ATO2 YNR002C Putative transmembrane protein involved in export of ammonia physical 1 1 1 Affinity Capture-RNA
ALK1 YGL021W Atypical protein kinase physical 1 1 1 Affinity Capture-RNA
HAL1 YPR005C Cytoplasmic protein involved in halotolerance physical 1 1 1 Affinity Capture-RNA
ELO1 YJL196C Elongase I, medium-chain acyl elongase physical 1 1 1 Affinity Capture-RNA
AIM14 YGL160W NADPH oxidase localized to the perinuclear ER physical 1 1 1 Affinity Capture-RNA
AAD15 YOL165C Putative aryl-alcohol dehydrogenase physical 1 1 1 Affinity Capture-RNA