Standard name Systematic name Name description Description
SBP1 YHL034C Protein that binds eIF4G and has a role in repression of translation Protein that binds eIF4G and has a role in repression of translation; has an RGG motif; found in cytoplasmic P bodies; binds to mRNAs under glucose starvation stress, most often in the 5' UTR; found associated with small nucleolar RNAs snR10 and snR11; SBP1 has a paralog, RNP1, that arose from the whole genome duplication
Visualize the interactome of SBP1
Links to external databases:
  SGD   |   KEGG   |  

Cell cycle phase and timing of transcription peak

Cell cycle phase Time (min)

CYCLoPs localization & abundance

WT1 WT2 WT3
Cytoplasm 0.984 0.981 0.955
ER NaN NaN 0.056

GFP localization & abundance

GFP localization GFP abundance
cytoplasm 12800

GO term count

Metabolism Cell cycle Cell division Signal transduction DNA replication
SBP1 2 0 0 0 0

List of interactors

Use the search utility to find the interactor you are looking for. By clicking the column headers the table will be sorted on that column. Use shift+click to sort on multiple columns. Default sorting is on number of experiments, number of unique methods and the number of publications, and alphabetical on standard name, in that order.
Standard name Systematic name Name description Type #Experiments #Methods #Publications Evidence
TIF4631 YGR162W Translation initiation factor eIF4G and scaffold protein physical 7 4 6 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Reconstituted Complex, Affinity Capture-RNA, Reconstituted Complex, Affinity Capture-Western
PAB1 YER165W Poly(A) binding protein physical 6 5 6 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-RNA, Co-fractionation, Protein-RNA, Affinity Capture-Western
CBF5 YLR175W Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs physical 4 2 4 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-RNA
GIS2 YNL255C Translational activator for mRNAs with internal ribosome entry sites physical 4 2 4 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-RNA, Affinity Capture-RNA
DHH1 YDL160C Cytoplasmic DEAD-box helicase and mRNA decapping activator physical 4 2 3 Affinity Capture-RNA, Affinity Capture-RNA, Affinity Capture-MS, Affinity Capture-RNA
COG3 YER157W Essential component of the conserved oligomeric Golgi complex genetic 4 2 3 Dosage Rescue, Negative Genetic, Negative Genetic, Negative Genetic
TEF1 YPR080W Translational elongation factor EF-1 alpha physical 4 2 3 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-RNA
COG6 YNL041C Component of the conserved oligomeric Golgi complex genetic 4 1 3 Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic
COG5 YNL051W Component of the conserved oligomeric Golgi complex genetic 4 1 3 Negative Genetic, Negative Genetic, Negative Genetic, Negative Genetic
TIF4632 YGL049C Translation initiation factor eIF4G and scaffold protein physical 3 3 3 Affinity Capture-MS, Reconstituted Complex, Affinity Capture-RNA
RPL25 YOL127W Ribosomal 60S subunit protein L25 physical 3 3 3 Affinity Capture-RNA, Co-fractionation, Affinity Capture-MS
BRX1 YOL077C Nucleolar protein physical 3 2 3 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-RNA
IMD3 YLR432W Inosine monophosphate dehydrogenase physical 3 2 3 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-RNA
XRN1 YGL173C Evolutionarily-conserved 5'-3' exonuclease physical 3 2 3 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-RNA
SSA1 YAL005C ATPase involved in protein folding and NLS-directed nuclear transport physical 3 2 3 Affinity Capture-RNA, Affinity Capture-MS, Affinity Capture-MS
RPS20 YHL015W Protein component of the small (40S) ribosomal subunit physical 3 2 3 Affinity Capture-MS, Affinity Capture-RNA, Affinity Capture-MS
RPS14A YCR031C Protein component of the small (40S) ribosomal subunit physical 3 2 3 Affinity Capture-MS, Affinity Capture-RNA, Affinity Capture-MS
PSK2 YOL045W PAS-domain containing serine/threonine protein kinase genetic 3 1 3 Negative Genetic, Negative Genetic, Negative Genetic
CAF20 YOR276W Phosphoprotein of the mRNA cap-binding complex physical 3 3 2 Affinity Capture-RNA, Affinity Capture-Western, Affinity Capture-MS
RIC1 YLR039C Protein involved in retrograde transport to the cis-Golgi network genetic 3 1 2 Negative Genetic, Negative Genetic, Negative Genetic
CDC33 YOL139C Translation initiation factor eIF4E physical 3 1 2 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS
SYS1 YJL004C Integral membrane protein of the Golgi genetic 3 1 2 Negative Genetic, Negative Genetic, Negative Genetic
COG7 YGL005C Component of the conserved oligomeric Golgi complex genetic 3 1 2 Negative Genetic, Negative Genetic, Negative Genetic
ARO2 YGL148W Bifunctional chorismate synthase and flavin reductase genetic 3 1 2 Negative Genetic, Negative Genetic, Negative Genetic
CHO2 YGR157W Phosphatidylethanolamine methyltransferase (PEMT) genetic 3 1 2 Negative Genetic, Negative Genetic, Negative Genetic
GCR1 YPL075W Transcriptional activator of genes involved in glycolysis regulation 2 2 2 chromatin immunoprecipitation-chip evidence, DNA to cDNA expression microarray evidence
DSN1 YIR010W Essential component of the outer kinetochore MIND complex physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
ESA1 YOR244W Catalytic subunit of the histone acetyltransferase complex (NuA4) physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
NOP4 YPL043W Nucleolar protein physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
NSA1 YGL111W Constituent of 66S pre-ribosomal particles physical 2 2 2 Affinity Capture-RNA, Affinity Capture-Western
RLP7 YNL002C Nucleolar protein similar to large ribosomal subunit L7 proteins physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
PRP43 YGL120C RNA helicase in the DEAH-box family physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
NOP58 YOR310C Protein involved in producing mature rRNAs and snoRNAs physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
RRP5 YMR229C RNA binding protein involved in synthesis of 18S and 5.8S rRNAs physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
NOP1 YDL014W Histone glutamine methyltransferase, modifies H2A at Q105 in nucleolus physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
NPL3 YDR432W RNA-binding protein physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
RRP43 YCR035C Exosome non-catalytic core component physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
RRP6 YOR001W Nuclear exosome exonuclease component physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
PWP1 YLR196W Protein with WD-40 repeats involved in rRNA processing physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
ECM16 YMR128W Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
NAB2 YGL122C Nuclear polyadenylated RNA-binding protein physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
PUF6 YDR496C Pumilio-homology domain protein physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
KRE33 YNL132W Acetyltransferase required for biogenesis of small ribosomal subunit physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
KRR1 YCL059C Nucleolar protein required for rRNA synthesis and ribosomal assembly physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
CRM1 YGR218W Nuclear export factor, exportin physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
HSP82 YPL240C Hsp90 chaperone physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
HTA2 YBL003C Histone H2A physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
TEF2 YBR118W Translational elongation factor EF-1 alpha physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
SRO9 YCL037C Cytoplasmic RNA-binding protein physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
STO1 YMR125W Large subunit of the nuclear mRNA cap-binding protein complex physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
SSB2 YNL209W Cytoplasmic ATPase that is a ribosome-associated molecular chaperone physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
TOM1 YDR457W E3 ubiquitin ligase of the hect-domain class physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
SBP1 YHL034C Protein that binds eIF4G and has a role in repression of translation physical 2 2 2 Affinity Capture-RNA, Reconstituted Complex
SCP160 YJL080C Essential RNA-binding G protein effector of mating response pathway physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
UTP10 YJL109C Nucleolar protein physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
VMA21 YGR105W Integral membrane protein required for V-ATPase function genetic 2 2 2 Synthetic Growth Defect, Negative Genetic
RRP12 YPL012W Protein required for export of the ribosomal subunits physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
GBP2 YCL011C Poly(A+) RNA-binding protein physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
MLP2 YIL149C Myosin-like protein associated with the nuclear envelope physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
RPS24B YIL069C Protein component of the small (40S) ribosomal subunit physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
BRE5 YNR051C Ubiquitin protease cofactor physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
RPS1A YLR441C Ribosomal protein of the small (40S) subunit physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
RPL20B YOR312C Ribosomal 60S subunit protein L20B physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
RPS17A YML024W Ribosomal protein 51 (rp51) of the small (40s) subunit physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
DBP5 YOR046C Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family genetic 2 2 2 Synthetic Lethality, Negative Genetic
HMT1 YBR034C Nuclear SAM-dependent mono- and asymmetric methyltransferase physical 2 2 2 Biochemical Activity, Affinity Capture-MS
RPL31A YDL075W Ribosomal 60S subunit protein L31A physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
RPS2 YGL123W Protein component of the small (40S) subunit physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
RPS3 YNL178W Protein component of the small (40S) ribosomal subunit physical 2 2 2 Affinity Capture-Western, Affinity Capture-MS
RPS10B YMR230W Protein component of the small (40S) ribosomal subunit physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
FAS1 YKL182W Beta subunit of fatty acid synthetase physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
RPL13B YMR142C Ribosomal 60S subunit protein L13B physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
RPS16A YMR143W Protein component of the small (40S) ribosomal subunit physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
RPL8B YLL045C Ribosomal 60S subunit protein L8A physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
RPS10A YOR293W Protein component of the small (40S) ribosomal subunit physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
RPS27A YKL156W Protein component of the small (40S) ribosomal subunit physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
RPL2B YIL018W Ribosomal 60S subunit protein L2B physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
EFG1 YGR271C-A Ribosome biogenesis factor required for maturation of 18S rRNA physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
RPS15 YOL040C Protein component of the small (40S) ribosomal subunit physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
FKH1 YIL131C Forkhead family transcription factor regulation 2 1 2 chromatin immunoprecipitation-chip evidence, chromatin immunoprecipitation-chip evidence
LSM1 YJL124C Lsm (Like Sm) protein genetic 2 1 2 Negative Genetic, Negative Genetic
PAT1 YCR077C Deadenylation-dependent mRNA-decapping factor genetic 2 1 2 Negative Genetic, Negative Genetic
RPD3 YNL330C Histone deacetylase, component of both the Rpd3S and Rpd3L complexes genetic 2 1 2 Negative Genetic, Negative Genetic
SNT1 YCR033W Set3C histone deacetylase scaffold genetic 2 1 2 Positive Genetic, Positive Genetic
USO1 YDL058W Essential protein involved in vesicle-mediated ER to Golgi transport genetic 2 1 2 Negative Genetic, Negative Genetic
SEH1 YGL100W Subunit of the Nup84 nuclear pore and SEACAT subcomplexes genetic 2 1 2 Negative Genetic, Negative Genetic
VPS51 YKR020W Component of the GARP (Golgi-associated retrograde protein) complex genetic 2 1 2 Negative Genetic, Negative Genetic
VMA13 YPR036W Subunit H of the V1 peripheral membrane domain of V-ATPase genetic 2 1 2 Negative Genetic, Negative Genetic
DRS2 YAL026C Trans-golgi network aminophospholipid translocase (flippase) genetic 2 1 2 Negative Genetic, Negative Genetic
RGP1 YDR137W Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p) genetic 2 1 2 Negative Genetic, Negative Genetic
RPS4A YJR145C Protein component of the small (40S) ribosomal subunit physical 2 1 2 Affinity Capture-MS, Affinity Capture-MS
RPS8A YBL072C Protein component of the small (40S) ribosomal subunit physical 2 1 2 Affinity Capture-MS, Affinity Capture-MS
RPS22A YJL190C Protein component of the small (40S) ribosomal subunit physical 2 1 2 Affinity Capture-MS, Affinity Capture-MS
BFR1 YOR198C Component of mRNP complexes associated with polyribosomes physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
PDR12 YPL058C Plasma membrane ATP-binding cassette (ABC) transporter genetic 2 1 2 Negative Genetic, Negative Genetic
RPS6A YPL090C Protein component of the small (40S) ribosomal subunit physical 2 1 2 Affinity Capture-MS, Affinity Capture-MS
RPL7B YPL198W Ribosomal 60S subunit protein L7B physical 2 1 2 Affinity Capture-MS, Affinity Capture-MS
PTK2 YJR059W Serine/threonine protein kinase genetic 2 1 2 Positive Genetic, Positive Genetic
LDB18 YLL049W Component of the dynactin complex genetic 2 1 2 Negative Genetic, Negative Genetic
ALG9 YNL219C Mannosyltransferase, involved in N-linked glycosylation genetic 2 1 2 Positive Genetic, Positive Genetic
PAT1 YCR077C Deadenylation-dependent mRNA-decapping factor physical 2 1 1 Affinity Capture-RNA, Affinity Capture-RNA
TIM22 YDL217C Essential core component of mitochondrial TIM22 complex genetic 2 1 1 Negative Genetic, Negative Genetic
SEC65 YML105C Subunit of the signal recognition particle (SRP) genetic 2 1 1 Negative Genetic, Negative Genetic
CSG2 YBR036C Endoplasmic reticulum membrane protein genetic 2 1 1 Negative Genetic, Negative Genetic
GCN5 YGR252W Catalytic subunit of ADA and SAGA histone acetyltransferase complexes regulation 1 1 1 chromatin immunoprecipitation-chip evidence
RFX1 YLR176C Major transcriptional repressor of DNA-damage-regulated genes regulation 1 1 1 chromatin immunoprecipitation-chip evidence
FKH2 YNL068C Forkhead family transcription factor regulation 1 1 1 chromatin immunoprecipitation-chip evidence
GCR2 YNL199C Transcriptional activator of genes involved in glycolysis regulation 1 1 1 chromatin immunoprecipitation-chip evidence
YAP6 YDR259C Basic leucine zipper (bZIP) transcription factor regulation 1 1 1 chromatin immunoprecipitation-chip evidence
CIN5 YOR028C Basic leucine zipper (bZIP) transcription factor of the yAP-1 family regulation 1 1 1 chromatin immunoprecipitation-chip evidence
CAD1 YDR423C AP-1-like basic leucine zipper (bZIP) transcriptional activator regulation 1 1 1 DNA to cDNA expression microarray evidence
RLM1 YPL089C MADS-box transcription factor regulation 1 1 1 chromatin immunoprecipitation-chip evidence
SNF1 YDR477W AMP-activated S/T protein kinase regulation 1 1 1 qualitative western immunoblotting evidence
RME1 YGR044C Zinc finger protein involved in control of meiosis regulation 1 1 1 chromatin immunoprecipitation-chip evidence
CHD1 YER164W Chromatin remodeler that regulates various aspects of transcription physical 1 1 1 Affinity Capture-RNA
CTR9 YOL145C Component of the Paf1p complex involved in transcription elongation physical 1 1 1 Affinity Capture-RNA
DED81 YHR019C Cytosolic asparaginyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
LEO1 YOR123C Component of the Paf1 complex physical 1 1 1 Affinity Capture-RNA
MCM22 YJR135C Outer kinetochore protein and component of the Ctf3 subcomplex physical 1 1 1 Affinity Capture-RNA
PAF1 YBR279W Component of the Paf1p complex involved in transcription elongation physical 1 1 1 Affinity Capture-RNA
RPB3 YIL021W RNA polymerase II third largest subunit B44 physical 1 1 1 Affinity Capture-RNA
RPO21 YDL140C RNA polymerase II largest subunit B220 physical 1 1 1 Affinity Capture-RNA
POB3 YML069W Subunit of the heterodimeric FACT complex (Spt16p-Pob3p) physical 1 1 1 Affinity Capture-RNA
CKA1 YIL035C Alpha catalytic subunit of casein kinase 2 (CK2) physical 1 1 1 Affinity Capture-RNA
CKA2 YOR061W Alpha' catalytic subunit of casein kinase 2 (CK2) physical 1 1 1 Affinity Capture-RNA
CKB1 YGL019W Beta regulatory subunit of casein kinase 2 (CK2) genetic 1 1 1 Negative Genetic
CKB2 YOR039W Beta' regulatory subunit of casein kinase 2 (CK2) physical 1 1 1 Affinity Capture-RNA
CKB2 YOR039W Beta' regulatory subunit of casein kinase 2 (CK2) genetic 1 1 1 Negative Genetic
RPB2 YOR151C RNA polymerase II second largest subunit B150 physical 1 1 1 Affinity Capture-RNA
ESF1 YDR365C Nucleolar protein involved in pre-rRNA processing physical 1 1 1 Affinity Capture-RNA
ENP2 YGR145W Component of the SSU physical 1 1 1 Affinity Capture-RNA
ARP4 YJL081C Nuclear actin-related protein involved in chromatin remodeling physical 1 1 1 Affinity Capture-RNA
IKI3 YLR384C Subunit of Elongator complex physical 1 1 1 Affinity Capture-RNA
RVB1 YDR190C ATP-dependent DNA helicase, also known as pontin physical 1 1 1 Affinity Capture-RNA
RVB2 YPL235W ATP-dependent DNA helicase, also known as reptin physical 1 1 1 Affinity Capture-RNA
DBP9 YLR276C DEAD-box protein required for 27S rRNA processing physical 1 1 1 Affinity Capture-RNA
DRS1 YLL008W Nucleolar DEAD-box protein required for ribosome assembly and function physical 1 1 1 Affinity Capture-RNA
EBP2 YKL172W Required for 25S rRNA maturation and 60S ribosomal subunit assembly physical 1 1 1 Affinity Capture-RNA
ERB1 YMR049C Constituent of 66S pre-ribosomal particles physical 1 1 1 Affinity Capture-RNA
NOG1 YPL093W Putative GTPase physical 1 1 1 Affinity Capture-RNA
NOP2 YNL061W rRNA m5C methyltransferase physical 1 1 1 Affinity Capture-RNA
NOP2 YNL061W rRNA m5C methyltransferase genetic 1 1 1 Negative Genetic
NOP7 YGR103W Component of several different pre-ribosomal particles physical 1 1 1 Affinity Capture-RNA
RPF1 YHR088W Protein involved in assembly and export of the large ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPF2 YKR081C Essential protein involved in rRNA maturation and ribosomal assembly physical 1 1 1 Affinity Capture-RNA
RPL10 YLR075W Ribosomal 60S subunit protein L10 physical 1 1 1 Affinity Capture-RNA
RPL16A YIL133C Ribosomal 60S subunit protein L16A physical 1 1 1 Affinity Capture-MS
RPL30 YGL030W Ribosomal 60S subunit protein L30 physical 1 1 1 Affinity Capture-RNA
RPL32 YBL092W Ribosomal 60S subunit protein L32 physical 1 1 1 Affinity Capture-RNA
GCD6 YDR211W Catalytic epsilon subunit of the translation initiation factor eIF2B physical 1 1 1 Affinity Capture-RNA
NOP9 YJL010C Essential subunit of U3-containing 90S preribosome physical 1 1 1 Affinity Capture-RNA
ADH1 YOL086C Alcohol dehydrogenase physical 1 1 1 Affinity Capture-RNA
KAP123 YER110C Karyopherin beta physical 1 1 1 Affinity Capture-RNA
MIA40 YKL195W Import and assembly protein in mitochondrial intermembrane space physical 1 1 1 Affinity Capture-RNA
AMN1 YBR158W Modulator of cell separation and mitotic exit physical 1 1 1 Affinity Capture-RNA
IMH1 YLR309C Protein involved in vesicular transport physical 1 1 1 Affinity Capture-RNA
PEX19 YDL065C Chaperone and import receptor for newly-synthesized class I PMPs physical 1 1 1 Affinity Capture-RNA
PFK27 YOL136C 6-phosphofructo-2-kinase physical 1 1 1 Affinity Capture-RNA
RIX7 YLL034C Putative ATPase of the AAA family physical 1 1 1 Affinity Capture-RNA
RIC1 YLR039C Protein involved in retrograde transport to the cis-Golgi network physical 1 1 1 Affinity Capture-RNA
COR1 YBL045C Core subunit of the ubiquinol-cytochrome c reductase complex physical 1 1 1 Affinity Capture-RNA
POP1 YNL221C Subunit of RNase MRP, nuclear RNase P and telomerase complexes genetic 1 1 1 Positive Genetic
POP3 YNL282W Subunit of both RNase MRP and nuclear RNase P genetic 1 1 1 Negative Genetic
BRE1 YDL074C E3 ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
NOC2 YOR206W Protein involved in ribosome biogenesis physical 1 1 1 Affinity Capture-RNA
ARL1 YBR164C Soluble GTPase with a role in regulation of membrane traffic physical 1 1 1 Affinity Capture-RNA
ARL1 YBR164C Soluble GTPase with a role in regulation of membrane traffic genetic 1 1 1 Negative Genetic
RRP14 YKL082C Essential protein, constituent of 66S pre-ribosomal particles physical 1 1 1 Affinity Capture-RNA
POL5 YEL055C Protein involved in 60S assembly and pre-40S AFs recycling physical 1 1 1 Affinity Capture-RNA
NAN1 YPL126W U3 snoRNP protein physical 1 1 1 Affinity Capture-RNA
RRP7 YCL031C Essential protein involved in rRNA processing and ribosome biogenesis physical 1 1 1 Affinity Capture-RNA
NOP15 YNL110C Constituent of 66S pre-ribosomal particles physical 1 1 1 Affinity Capture-RNA
CIC1 YHR052W Essential protein that interacts with proteasome components physical 1 1 1 Affinity Capture-RNA
ARC1 YGL105W Protein that binds tRNA and methionyl- and glutamyl-tRNA synthetases physical 1 1 1 Affinity Capture-RNA
MES1 YGR264C Methionyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
GUS1 YGL245W Glutamyl-tRNA synthetase (GluRS) physical 1 1 1 Affinity Capture-RNA
DBP3 YGL078C RNA-Dependent ATPase, member of DExD/H-box family physical 1 1 1 Affinity Capture-RNA
NSR1 YGR159C Nucleolin, nucleolar protein that binds nuclear localization sequences physical 1 1 1 Affinity Capture-RNA
NHP2 YDL208W Protein related to mammalian high mobility group (HMG) proteins physical 1 1 1 Affinity Capture-RNA
NOP56 YLR197W Essential evolutionarily-conserved nucleolar protein physical 1 1 1 Affinity Capture-RNA
FUN12 YAL035W Translation initiation factor eIF5B physical 1 1 1 Affinity Capture-RNA
MAK21 YDR060W Constituent of 66S pre-ribosomal particles physical 1 1 1 Affinity Capture-RNA
HCA4 YJL033W DEAD box RNA helicase physical 1 1 1 Affinity Capture-RNA
MTR4 YJL050W RNA duplex-sensing translocase physical 1 1 1 Affinity Capture-RNA
PUS7 YOR243C Pseudouridine synthase physical 1 1 1 Affinity Capture-RNA
RAT1 YOR048C Nuclear 5' to 3' single-stranded RNA exonuclease physical 1 1 1 Affinity Capture-RNA
SAP185 YJL098W Protein that forms a complex with the Sit4p protein phosphatase physical 1 1 1 Affinity Capture-RNA
SAP155 YFR040W Protein required for function of the Sit4p protein phosphatase physical 1 1 1 Affinity Capture-RNA
SAP190 YKR028W Protein that forms a complex with the Sit4p protein phosphatase physical 1 1 1 Affinity Capture-RNA
LSM1 YJL124C Lsm (Like Sm) protein physical 1 1 1 Affinity Capture-RNA
DED1 YOR204W ATP-dependent DEAD-box RNA helicase with strand-annealing activity physical 1 1 1 Affinity Capture-RNA
RPS4B YHR203C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
CDC48 YDL126C AAA ATPase with protein-unfoldase activity physical 1 1 1 Affinity Capture-RNA
RRP9 YPR137W Protein involved in pre-rRNA processing physical 1 1 1 Affinity Capture-RNA
CSL4 YNL232W Exosome non-catalytic core component physical 1 1 1 Affinity Capture-RNA
DIS3 YOL021C Exosome core complex catalytic subunit physical 1 1 1 Affinity Capture-RNA
LRP1 YHR081W Nuclear exosome-associated nucleic acid binding protein physical 1 1 1 Affinity Capture-RNA
RPC40 YPR110C RNA polymerase subunit AC40 physical 1 1 1 Affinity Capture-RNA
RRP4 YHR069C Exosome non-catalytic core component genetic 1 1 1 Negative Genetic
RRP45 YDR280W Exosome non-catalytic core component physical 1 1 1 Affinity Capture-RNA
RRP42 YDL111C Exosome non-catalytic core component physical 1 1 1 Affinity Capture-RNA
RRP46 YGR095C Exosome non-catalytic core component physical 1 1 1 Affinity Capture-RNA
RPA34 YJL148W RNA polymerase I subunit A34.5 physical 1 1 1 Affinity Capture-RNA
RPB5 YBR154C RNA polymerase subunit ABC27 physical 1 1 1 Affinity Capture-RNA
PSY2 YNL201C Subunit of protein phosphatase PP4 complex physical 1 1 1 Affinity Capture-RNA
RPC34 YNR003C RNA polymerase III subunit C34 genetic 1 1 1 Negative Genetic
RPO31 YOR116C RNA polymerase III largest subunit C160 physical 1 1 1 Affinity Capture-RNA
RPA190 YOR341W RNA polymerase I largest subunit A190 physical 1 1 1 Affinity Capture-RNA
RPB7 YDR404C RNA polymerase II subunit B16 genetic 1 1 1 Negative Genetic
RPA135 YPR010C RNA polymerase I second largest subunit A135 physical 1 1 1 Affinity Capture-RNA
RPA43 YOR340C RNA polymerase I subunit A43 physical 1 1 1 Affinity Capture-RNA
RRB1 YMR131C Specific assembly chaperone for ribosomal protein Rpl3p physical 1 1 1 Affinity Capture-RNA
CBC2 YPL178W Small subunit of the heterodimeric cap binding complex with Sto1p physical 1 1 1 Affinity Capture-MS
RRP8 YDR083W Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase physical 1 1 1 Affinity Capture-RNA
GCD11 YER025W Gamma subunit of the translation initiation factor eIF2 physical 1 1 1 Affinity Capture-RNA
RSC8 YFR037C Component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
NUT1 YGL151W Component of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
ILS1 YBL076C Cytoplasmic isoleucine-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
NOP12 YOL041C Nucleolar protein involved in pre-25S rRNA processing physical 1 1 1 Affinity Capture-MS
RPN1 YHR027C Non-ATPase base subunit of the 19S RP of the 26S proteasome physical 1 1 1 Affinity Capture-RNA
RPN11 YFR004W Metalloprotease subunit of 19S regulatory particle physical 1 1 1 Affinity Capture-RNA
RPN5 YDL147W Subunit of the CSN and 26S proteasome lid complexes physical 1 1 1 Affinity Capture-RNA
RPN6 YDL097C Essential, non-ATPase regulatory subunit of the 26S proteasome lid physical 1 1 1 Affinity Capture-RNA
RPN12 YFR052W Subunit of the 19S regulatory particle of the 26S proteasome lid physical 1 1 1 Affinity Capture-RNA
RPN12 YFR052W Subunit of the 19S regulatory particle of the 26S proteasome lid genetic 1 1 1 Negative Genetic
RPN2 YIL075C Subunit of the 26S proteasome physical 1 1 1 Affinity Capture-RNA
RPN3 YER021W Essential non-ATPase regulatory subunit of the 26S proteasome lid physical 1 1 1 Affinity Capture-RNA
RPN8 YOR261C Essential non-ATPase regulatory subunit of the 26S proteasome physical 1 1 1 Affinity Capture-RNA
RPN7 YPR108W Essential non-ATPase regulatory subunit of the 26S proteasome physical 1 1 1 Affinity Capture-RNA
RPT1 YKL145W ATPase of the 19S regulatory particle of the 26S proteasome physical 1 1 1 Affinity Capture-RNA
RPT2 YDL007W ATPase of the 19S regulatory particle of the 26S proteasome physical 1 1 1 Affinity Capture-RNA
RPT6 YGL048C ATPase of the 19S regulatory particle of the 26S proteasome physical 1 1 1 Affinity Capture-RNA
RPT3 YDR394W ATPase of the 19S regulatory particle of the 26S proteasome physical 1 1 1 Affinity Capture-RNA
HCR1 YLR192C eIF3j component of translation initiation factor 3 (eIF3) physical 1 1 1 Affinity Capture-RNA
NIP1 YMR309C eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3) physical 1 1 1 Affinity Capture-RNA
PRT1 YOR361C eIF3b subunit of the eukaryotic translation initiation factor 3 (eIF3) physical 1 1 1 Affinity Capture-RNA
RPG1 YBR079C eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3) physical 1 1 1 Affinity Capture-RNA
GCD1 YOR260W Gamma subunit of the translation initiation factor eIF2B physical 1 1 1 Affinity Capture-RNA
ACT1 YFL039C Actin, structural protein in cytoskeleton physical 1 1 1 Affinity Capture-RNA
GCD2 YGR083C Delta subunit of the translation initiation factor eIF2B physical 1 1 1 Affinity Capture-RNA
RLI1 YDR091C Essential Fe-S protein physical 1 1 1 Affinity Capture-RNA
PRE1 YER012W Beta 4 subunit of the 20S proteasome physical 1 1 1 Affinity Capture-RNA
PRE10 YOR362C Alpha 7 subunit of the 20S proteasome physical 1 1 1 Affinity Capture-RNA
PRE5 YMR314W Alpha 6 subunit of the 20S proteasome physical 1 1 1 Affinity Capture-RNA
PRE6 YOL038W Alpha 4 subunit of the 20S proteasome physical 1 1 1 Affinity Capture-RNA
PRE3 YJL001W Beta 1 subunit of the 20S proteasome physical 1 1 1 Affinity Capture-RNA
ALA1 YOR335C Cytoplasmic and mitochondrial alanyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
CDC39 YCR093W Subunit of the CCR4-NOT1 core complex physical 1 1 1 Affinity Capture-RNA
NAM7 YMR080C ATP-dependent RNA helicase of the SFI superfamily physical 1 1 1 Affinity Capture-MS
PEP1 YBL017C Type I transmembrane sorting receptor for multiple vacuolar hydrolases physical 1 1 1 Affinity Capture-RNA
PUS1 YPL212C tRNA:pseudouridine synthase physical 1 1 1 Affinity Capture-RNA
BMS1 YPL217C GTPase required for ribosomal subunit synthesis and rRNA processing physical 1 1 1 Affinity Capture-RNA
REB1 YBR049C RNA polymerase I enhancer binding protein physical 1 1 1 Affinity Capture-RNA
RNT1 YMR239C Nuclear dsRNA-specific ribonuclease (RNase III) physical 1 1 1 Affinity Capture-RNA
LHP1 YDL051W RNA binding protein required for maturation of tRNA and U6 snRNA physical 1 1 1 Affinity Capture-RNA
LHP1 YDL051W RNA binding protein required for maturation of tRNA and U6 snRNA genetic 1 1 1 Negative Genetic
OLA1 YBR025C P-loop ATPase with similarity to human OLA1 and bacterial YchF physical 1 1 1 Affinity Capture-RNA
EFT2 YDR385W Elongation factor 2 (EF-2), also encoded by EFT1 physical 1 1 1 Affinity Capture-RNA
ACC1 YNR016C Acetyl-CoA carboxylase, biotin containing enzyme physical 1 1 1 Affinity Capture-RNA
ADE13 YLR359W Adenylosuccinate lyase physical 1 1 1 Affinity Capture-RNA
AOS1 YPR180W Subunit of heterodimeric nuclear SUMO activating enzyme E1 with Uba2p physical 1 1 1 Affinity Capture-RNA
APC1 YNL172W Largest subunit of the Anaphase-Promoting Complex/Cyclosome genetic 1 1 1 Negative Genetic
APL2 YKL135C Beta-adaptin subunit of the clathrin-associated protein (AP-1) complex physical 1 1 1 Affinity Capture-RNA
APL5 YPL195W Delta adaptin-like subunit of the clathrin associated protein complex physical 1 1 1 Affinity Capture-RNA
ARO1 YDR127W Pentafunctional arom protein physical 1 1 1 Affinity Capture-RNA
ARO1 YDR127W Pentafunctional arom protein genetic 1 1 1 Negative Genetic
ARP3 YJR065C Essential component of the Arp2/3 complex physical 1 1 1 Affinity Capture-RNA
BAT1 YHR208W Mitochondrial branched-chain amino acid (BCAA) aminotransferase physical 1 1 1 Affinity Capture-RNA
BDF1 YLR399C BET family transcriptional regulator physical 1 1 1 Affinity Capture-RNA
BET2 YPR176C Beta subunit of Type II geranylgeranyltransferase physical 1 1 1 Affinity Capture-RNA
BMH2 YDR099W 14-3-3 protein, minor isoform physical 1 1 1 Affinity Capture-RNA
ASC1 YMR116C G-protein beta subunit and guanine dissociation inhibitor for Gpa2p physical 1 1 1 Affinity Capture-MS
BEM2 YER155C Rho GTPase activating protein (RhoGAP) physical 1 1 1 Affinity Capture-RNA
CAP1 YKL007W Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p) physical 1 1 1 Affinity Capture-RNA
CCL1 YPR025C Cyclin partner of the cyclin-dependent kinase (CDK) Kin28p physical 1 1 1 Affinity Capture-RNA
CDC14 YFR028C Protein phosphatase required for mitotic exit genetic 1 1 1 Dosage Rescue
CDC11 YJR076C Component of the septin ring that is required for cytokinesis physical 1 1 1 Affinity Capture-RNA
CDC3 YLR314C Component of the septin ring that is required for cytokinesis physical 1 1 1 Affinity Capture-RNA
BNI1 YNL271C Formin physical 1 1 1 Affinity Capture-RNA
RIX1 YHR197W Component of the Rix1 complex and possibly pre-replicative complexes physical 1 1 1 Affinity Capture-RNA
CEG1 YGL130W Guanylyltransferase involved in mRNA 5' capping physical 1 1 1 Affinity Capture-RNA
CHC1 YGL206C Clathrin heavy chain physical 1 1 1 Affinity Capture-RNA
CNS1 YBR155W TPR-containing co-chaperone physical 1 1 1 Affinity Capture-RNA
COP1 YDL145C Alpha subunit of COPI vesicle coatomer complex physical 1 1 1 Affinity Capture-RNA
COP1 YDL145C Alpha subunit of COPI vesicle coatomer complex genetic 1 1 1 Negative Genetic
CPR1 YDR155C Cytoplasmic peptidyl-prolyl cis-trans isomerase (cyclophilin) physical 1 1 1 Affinity Capture-RNA
CTK1 YKL139W Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I) physical 1 1 1 Affinity Capture-RNA
CYR1 YJL005W Adenylate cyclase physical 1 1 1 Affinity Capture-RNA
CYS4 YGR155W Cystathionine beta-synthase physical 1 1 1 Affinity Capture-RNA
DCP2 YNL118C Catalytic subunit of Dcp1p-Dcp2p decapping enzyme complex genetic 1 1 1 Dosage Rescue
DPB3 YBR278W Third-largest subunit of DNA polymerase II (DNA polymerase epsilon) genetic 1 1 1 Negative Genetic
EDE1 YBL047C Scaffold protein involved in the formation of early endocytic sites physical 1 1 1 Affinity Capture-RNA
ENO1 YGR254W Enolase I, a phosphopyruvate hydratase physical 1 1 1 Affinity Capture-RNA
EPL1 YFL024C Subunit of NuA4, an essential histone H4/H2A acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
FPR1 YNL135C Peptidyl-prolyl cis-trans isomerase (PPIase) physical 1 1 1 Affinity Capture-RNA
FRS1 YLR060W Beta subunit of cytoplasmic phenylalanyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
FKS1 YLR342W Catalytic subunit of 1,3-beta-D-glucan synthase physical 1 1 1 Affinity Capture-RNA
GCN1 YGL195W Positive regulator of the Gcn2p kinase activity physical 1 1 1 Affinity Capture-RNA
CCT4 YDL143W Subunit of the cytosolic chaperonin Cct ring complex physical 1 1 1 Affinity Capture-RNA
GCD7 YLR291C Beta subunit of translation initiation factor eIF2B physical 1 1 1 Affinity Capture-RNA
GDI1 YER136W GDP dissociation inhibitor physical 1 1 1 Affinity Capture-RNA
GGA2 YHR108W Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking physical 1 1 1 Affinity Capture-RNA
GLO3 YER122C ADP-ribosylation factor GTPase activating protein (ARF GAP) physical 1 1 1 Affinity Capture-RNA
GLO3 YER122C ADP-ribosylation factor GTPase activating protein (ARF GAP) genetic 1 1 1 Negative Genetic
ERV25 YML012W Member of the p24 family involved in ER to Golgi transport genetic 1 1 1 Negative Genetic
BDF2 YDL070W Protein involved in transcription initiation physical 1 1 1 Affinity Capture-RNA
BDF2 YDL070W Protein involved in transcription initiation genetic 1 1 1 Negative Genetic
GLY1 YEL046C Threonine aldolase physical 1 1 1 Affinity Capture-RNA
HHF1 YBR009C Histone H4 physical 1 1 1 Affinity Capture-MS
HRP1 YOL123W Subunit of cleavage factor I physical 1 1 1 Affinity Capture-RNA
HRT1 YOL133W RING-H2 domain core subunit of multiple ubiquitin ligase complexes physical 1 1 1 Affinity Capture-RNA
IPP1 YBR011C Cytoplasmic inorganic pyrophosphatase (PPase) physical 1 1 1 Affinity Capture-RNA
COG8 YML071C Component of the conserved oligomeric Golgi complex genetic 1 1 1 Negative Genetic
ISW1 YBR245C ATPase subunit of imitation-switch (ISWI) class chromatin remodelers physical 1 1 1 Affinity Capture-RNA
ISW2 YOR304W ATP-dependent DNA translocase involved in chromatin remodeling physical 1 1 1 Affinity Capture-RNA
CLU1 YMR012W Subunit of the eukaryotic translation initiation factor 3 (eIF3) physical 1 1 1 Affinity Capture-RNA
ECM29 YHL030W Scaffold protein physical 1 1 1 Affinity Capture-RNA
ARB1 YER036C ATPase of the ATP-binding cassette (ABC) family physical 1 1 1 Affinity Capture-RNA
MRD1 YPR112C Essential conserved small ribosomal subunit (40s) synthesis factor physical 1 1 1 Affinity Capture-RNA
HSL1 YKL101W Nim1p-related protein kinase physical 1 1 1 Affinity Capture-RNA
FAP7 YDL166C Essential NTPase required for small ribosome subunit synthesis physical 1 1 1 Affinity Capture-RNA
KRS1 YDR037W Lysyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
END3 YNL084C EH domain-containing protein involved in endocytosis physical 1 1 1 Affinity Capture-RNA
GEA2 YEL022W Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs) physical 1 1 1 Affinity Capture-RNA
GFA1 YKL104C Glutamine-fructose-6-phosphate amidotransferase physical 1 1 1 Affinity Capture-RNA
LSM4 YER112W Lsm (Like Sm) protein physical 1 1 1 Affinity Capture-RNA
LSM7 YNL147W Lsm (Like Sm) protein physical 1 1 1 Affinity Capture-RNA
ENO2 YHR174W Enolase II, a phosphopyruvate hydratase physical 1 1 1 Affinity Capture-RNA
KEL1 YHR158C Protein required for proper cell fusion and cell morphology physical 1 1 1 Affinity Capture-RNA
MAK5 YBR142W Essential nucleolar protein physical 1 1 1 Affinity Capture-RNA
MAS1 YLR163C Beta subunit of the mitochondrial processing protease (MPP) physical 1 1 1 Affinity Capture-RNA
GLT1 YDL171C NAD(+)-dependent glutamate synthase (GOGAT) physical 1 1 1 Affinity Capture-RNA
GAL11 YOL051W Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
MED2 YDL005C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
FBA1 YKL060C Fructose 1,6-bisphosphate aldolase physical 1 1 1 Affinity Capture-RNA
MOT1 YPL082C Essential protein involved in regulation of transcription physical 1 1 1 Affinity Capture-RNA
MOT1 YPL082C Essential protein involved in regulation of transcription genetic 1 1 1 Negative Genetic
HSC82 YMR186W Cytoplasmic chaperone of the Hsp90 family physical 1 1 1 Affinity Capture-RNA
HSC82 YMR186W Cytoplasmic chaperone of the Hsp90 family genetic 1 1 1 Synthetic Growth Defect
MRPL28 YDR462W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-MS
MRPL36 YBR122C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRPL7 YDR237W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-MS
MSH2 YOL090W Protein that binds to DNA mismatches physical 1 1 1 Affinity Capture-RNA
MUM2 YBR057C Protein essential for meiotic DNA replication and sporulation physical 1 1 1 Affinity Capture-RNA
MYO1 YHR023W Type II myosin heavy chain physical 1 1 1 Affinity Capture-RNA
MAM33 YIL070C Acidic protein of the mitochondrial matrix physical 1 1 1 Affinity Capture-MS
MYO2 YOR326W Type V myosin motor involved in actin-based transport of cargos physical 1 1 1 Affinity Capture-RNA
GIN4 YDR507C Protein kinase involved in bud growth and assembly of the septin ring physical 1 1 1 Affinity Capture-RNA
LYS12 YIL094C Homo-isocitrate dehydrogenase physical 1 1 1 Affinity Capture-RNA
MIS1 YBR084W Mitochondrial C1-tetrahydrofolate synthase physical 1 1 1 Affinity Capture-RNA
NCL1 YBL024W S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase physical 1 1 1 Affinity Capture-RNA
ARP8 YOR141C Nuclear actin-related protein involved in chromatin remodeling physical 1 1 1 Affinity Capture-RNA
INO80 YGL150C Nucleosome spacing factor genetic 1 1 1 Negative Genetic
NHP10 YDL002C Non-essential INO80 chromatin remodeling complex subunit genetic 1 1 1 Negative Genetic
NMD3 YHR170W Protein involved in nuclear export of the large ribosomal subunit physical 1 1 1 Affinity Capture-RNA
FPR4 YLR449W Peptidyl-prolyl cis-trans isomerase (PPIase) physical 1 1 1 Affinity Capture-RNA
FAS2 YPL231W Alpha subunit of fatty acid synthetase physical 1 1 1 Affinity Capture-RNA
NIC96 YFR002W Linker nucleoporin component of the nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
NUP116 YMR047C FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
NUP116 YMR047C FG-nucleoporin component of central core of the nuclear pore complex genetic 1 1 1 Negative Genetic
NUP60 YAR002W FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
HSP42 YDR171W Small heat shock protein (sHSP) with chaperone activity physical 1 1 1 Affinity Capture-RNA
OST1 YJL002C Alpha subunit of the oligosaccharyltransferase complex of the ER lumen physical 1 1 1 Affinity Capture-RNA
GIM3 YNL153C Subunit of the heterohexameric cochaperone prefoldin complex genetic 1 1 1 Positive Genetic
GIM5 YML094W Subunit of the heterohexameric cochaperone prefoldin complex physical 1 1 1 Affinity Capture-RNA
PAC10 YGR078C Part of the heteromeric co-chaperone GimC/prefoldin complex physical 1 1 1 Affinity Capture-RNA
PAN2 YGL094C Catalytic subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex physical 1 1 1 Affinity Capture-RNA
HMO1 YDR174W Chromatin associated high mobility group (HMG) family member physical 1 1 1 Affinity Capture-RNA
LPD1 YFL018C Dihydrolipoamide dehydrogenase physical 1 1 1 Affinity Capture-RNA
PDA1 YER178W E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex physical 1 1 1 Affinity Capture-RNA
PDB1 YBR221C E1 beta subunit of the pyruvate dehydrogenase (PDH) complex physical 1 1 1 Affinity Capture-RNA
DIG1 YPL049C MAP kinase-responsive inhibitor of the Ste12p transcription factor genetic 1 1 1 Negative Genetic
PFK1 YGR240C Alpha subunit of heterooctameric phosphofructokinase physical 1 1 1 Affinity Capture-RNA
PGK1 YCR012W 3-phosphoglycerate kinase physical 1 1 1 Affinity Capture-RNA
PIM1 YBL022C ATP-dependent Lon protease physical 1 1 1 Affinity Capture-RNA
HSP82 YPL240C Hsp90 chaperone genetic 1 1 1 Synthetic Growth Defect
BLM10 YFL007W Proteasome activator physical 1 1 1 Affinity Capture-RNA
HTA1 YDR225W Histone H2A genetic 1 1 1 Positive Genetic
PRP31 YGR091W Splicing factor physical 1 1 1 Affinity Capture-RNA
PRP6 YBR055C Splicing factor physical 1 1 1 Affinity Capture-RNA
PRP6 YBR055C Splicing factor genetic 1 1 1 Negative Genetic
LIN1 YHR156C Non-essential component of U5 snRNP genetic 1 1 1 Negative Genetic
PTC3 YBL056W Type 2C protein phosphatase (PP2C) physical 1 1 1 Affinity Capture-RNA
PAA1 YDR071C Polyamine acetyltransferase physical 1 1 1 Affinity Capture-RNA
NAB3 YPL190C RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p) physical 1 1 1 Affinity Capture-RNA
POL2 YNL262W Catalytic subunit of DNA polymerase (II) epsilon physical 1 1 1 Affinity Capture-RNA
PUB1 YNL016W Poly (A)+ RNA-binding protein physical 1 1 1 Affinity Capture-RNA
NAB6 YML117W Putative RNA-binding protein physical 1 1 1 Affinity Capture-RNA
NOP14 YDL148C Nucleolar protein physical 1 1 1 Affinity Capture-RNA
NOP14 YDL148C Nucleolar protein genetic 1 1 1 Negative Genetic
PDC1 YLR044C Major of three pyruvate decarboxylase isozymes physical 1 1 1 Affinity Capture-RNA
PEP4 YPL154C Vacuolar aspartyl protease (proteinase A) physical 1 1 1 Affinity Capture-RNA
GCN20 YFR009W Positive regulator of the Gcn2p kinase activity physical 1 1 1 Affinity Capture-RNA
MKT1 YNL085W Protein similar to nucleases that forms a complex with Pbp1p physical 1 1 1 Affinity Capture-RNA
RAI1 YGL246C Nuclear decapping endonuclease physical 1 1 1 Affinity Capture-RNA
GPM1 YKL152C Tetrameric phosphoglycerate mutase physical 1 1 1 Affinity Capture-RNA
RFC2 YJR068W Subunit of heteropentameric Replication factor C (RF-C) physical 1 1 1 Affinity Capture-RNA
RPD3 YNL330C Histone deacetylase, component of both the Rpd3S and Rpd3L complexes physical 1 1 1 Affinity Capture-RNA
CTI6 YPL181W Component of the Rpd3L histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
ADE3 YGR204W Cytoplasmic trifunctional enzyme physical 1 1 1 Affinity Capture-RNA
DBP2 YNL112W ATP-dependent RNA helicase of the DEAD-box protein family physical 1 1 1 Affinity Capture-RNA
RPL2A YFR031C-A Ribosomal 60S subunit protein L2A physical 1 1 1 Affinity Capture-RNA
PUP3 YER094C Beta 3 subunit of the 20S proteasome physical 1 1 1 Affinity Capture-RNA
RPO26 YPR187W RNA polymerase subunit ABC23 physical 1 1 1 Affinity Capture-RNA
RTS1 YOR014W B-type regulatory subunit of protein phosphatase 2A (PP2A) physical 1 1 1 Affinity Capture-RNA
NUM1 YDR150W Protein required for nuclear migration physical 1 1 1 Affinity Capture-RNA
NUM1 YDR150W Protein required for nuclear migration genetic 1 1 1 Negative Genetic
REA1 YLR106C Huge dynein-related AAA-type ATPase (midasin) physical 1 1 1 Affinity Capture-RNA
PGI1 YBR196C Glycolytic enzyme phosphoglucose isomerase physical 1 1 1 Affinity Capture-RNA
NUP145 YGL092W Essential protein with distinct roles in two nuclear pore subcomplexes physical 1 1 1 Affinity Capture-RNA
NUP84 YDL116W Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
NUP85 YJR042W Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
RPP2B YDR382W Ribosomal protein P2 beta physical 1 1 1 Affinity Capture-RNA
CSE1 YGL238W Nuclear envelope protein that acts as a recycling factor physical 1 1 1 Affinity Capture-RNA
SAM1 YLR180W S-adenosylmethionine synthetase physical 1 1 1 Affinity Capture-RNA
HOS4 YIL112W Subunit of the Set3 complex physical 1 1 1 Affinity Capture-RNA
BGL2 YGR282C Endo-beta-1,3-glucanase physical 1 1 1 Affinity Capture-RNA
NET1 YJL076W Core subunit of the RENT complex physical 1 1 1 Affinity Capture-RNA
CCT2 YIL142W Subunit beta of the cytosolic chaperonin Cct ring complex physical 1 1 1 Affinity Capture-RNA
CDC25 YLR310C Membrane bound guanine nucleotide exchange factor physical 1 1 1 Affinity Capture-RNA
HRK1 YOR267C Protein kinase physical 1 1 1 Affinity Capture-RNA
BZZ1 YHR114W SH3 domain protein implicated in regulating actin polymerization physical 1 1 1 Affinity Capture-RNA
CCT8 YJL008C Subunit of the cytosolic chaperonin Cct ring complex physical 1 1 1 Affinity Capture-RNA
SAK1 YER129W Upstream serine/threonine kinase for the SNF1 complex physical 1 1 1 Affinity Capture-RNA
REG1 YDR028C Regulatory subunit of type 1 protein phosphatase Glc7p physical 1 1 1 Affinity Capture-RNA
NAT1 YDL040C Subunit of protein N-terminal acetyltransferase NatA physical 1 1 1 Affinity Capture-RNA
PFK2 YMR205C Beta subunit of heterooctameric phosphofructokinase physical 1 1 1 Affinity Capture-RNA
RPT5 YOR117W ATPase of the 19S regulatory particle of the 26S proteasome physical 1 1 1 Affinity Capture-RNA
NGG1 YDR176W Subunit of chromatin modifying histone acetyltransferase complexes physical 1 1 1 Affinity Capture-RNA
MLP1 YKR095W Myosin-like protein associated with the nuclear envelope physical 1 1 1 Affinity Capture-RNA
MLP1 YKR095W Myosin-like protein associated with the nuclear envelope genetic 1 1 1 Synthetic Haploinsufficiency
IST2 YBR086C Cortical ER protein involved in ER-plasma membrane (PM) tethering physical 1 1 1 Affinity Capture-RNA
ROM2 YLR371W Guanine nucleotide exchange factor (GEF) for Rho1p and Rho2p genetic 1 1 1 Positive Genetic
HEM13 YDR044W Coproporphyrinogen III oxidase physical 1 1 1 Affinity Capture-RNA
CCT6 YDR188W Subunit of the cytosolic chaperonin Cct ring complex physical 1 1 1 Affinity Capture-RNA
CAM1 YPL048W One of two isoforms of the gamma subunit of eEF1B physical 1 1 1 Affinity Capture-RNA
EFB1 YAL003W Translation elongation factor 1 beta physical 1 1 1 Affinity Capture-RNA
YRA1 YDR381W Nuclear polyadenylated RNA-binding protein physical 1 1 1 Affinity Capture-MS
YRA1 YDR381W Nuclear polyadenylated RNA-binding protein genetic 1 1 1 Negative Genetic
SGV1 YPR161C Cyclin (Bur2p)-dependent protein kinase physical 1 1 1 Affinity Capture-MS
TAO3 YIL129C Component of the RAM signaling network physical 1 1 1 Affinity Capture-MS
TPS1 YBR126C Synthase subunit of trehalose-6-P synthase/phosphatase complex physical 1 1 1 Affinity Capture-MS
TSL1 YML100W Large subunit of trehalose 6-phosphate synthase/phosphatase complex physical 1 1 1 Affinity Capture-MS
SRO7 YPR032W Effector of Rab GTPase Sec4p physical 1 1 1 Protein-RNA
TRM112 YNR046W Protein involved in methylation of tRNA, rRNA, and translation factors physical 1 1 1 Affinity Capture-MS
SWH1 YAR042W Protein similar to mammalian oxysterol-binding protein physical 1 1 1 Affinity Capture-RNA
UTP20 YBL004W Component of the small-subunit (SSU) processome physical 1 1 1 Affinity Capture-RNA
SLA1 YBL007C Cytoskeletal protein binding protein physical 1 1 1 Affinity Capture-RNA
STU1 YBL034C Microtubule plus-end-tracking non-motor protein physical 1 1 1 Affinity Capture-RNA
URA7 YBL039C Major CTP synthase isozyme (see also URA8) physical 1 1 1 Affinity Capture-RNA
YBL071C-B YBL071C-B Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
TAT1 YBR069C Amino acid transporter for valine, leucine, isoleucine, and tyrosine physical 1 1 1 Affinity Capture-RNA
SEC18 YBR080C AAA ATPase and SNARE disassembly chaperone physical 1 1 1 Affinity Capture-RNA
UBC4 YBR082C Ubiquitin-conjugating enzyme (E2) physical 1 1 1 Affinity Capture-RNA
VID24 YBR105C GID Complex regulatory subunit physical 1 1 1 Affinity Capture-RNA
YSA1 YBR111C Nudix hydrolase family member with ADP-ribose pyrophosphatase activity physical 1 1 1 Affinity Capture-RNA
VMA2 YBR127C Subunit B of V1 peripheral membrane domain of vacuolar H+-ATPase physical 1 1 1 Affinity Capture-RNA
SUP45 YBR143C Polypeptide release factor (eRF1) in translation termination physical 1 1 1 Affinity Capture-RNA
TOS1 YBR162C Covalently-bound cell wall protein of unknown function physical 1 1 1 Affinity Capture-RNA
YSY6 YBR162W-A Protein of unknown function physical 1 1 1 Affinity Capture-RNA
TYR1 YBR166C Prephenate dehydrogenase involved in tyrosine biosynthesis physical 1 1 1 Affinity Capture-RNA
SMY2 YBR172C GYF domain protein physical 1 1 1 Affinity Capture-RNA
TAF5 YBR198C Subunit (90 kDa) of TFIID and SAGA complexes physical 1 1 1 Affinity Capture-RNA
YBR238C YBR238C Mitochondrial membrane protein physical 1 1 1 Affinity Capture-RNA
YCL042W YCL042W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SPB1 YCL054W AdoMet-dependent methyltransferase physical 1 1 1 Affinity Capture-RNA
YCR016W YCR016W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SNT1 YCR033W Set3C histone deacetylase scaffold physical 1 1 1 Affinity Capture-RNA
TAF2 YCR042C TFIID subunit (150 kDa) physical 1 1 1 Affinity Capture-RNA
THR4 YCR053W Threonine synthase physical 1 1 1 Affinity Capture-RNA
TUP1 YCR084C General repressor of transcription in complex with Cyc8p physical 1 1 1 Affinity Capture-RNA
STP4 YDL048C Protein containing a Kruppel-type zinc-finger domain physical 1 1 1 Affinity Capture-RNA
USO1 YDL058W Essential protein involved in vesicle-mediated ER to Golgi transport physical 1 1 1 Affinity Capture-RNA
TSR1 YDL060W Protein required for processing of 20S pre-rRNA in the cytoplasm physical 1 1 1 Affinity Capture-RNA
YET3 YDL072C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SUB2 YDL084W Component of the TREX complex required for nuclear mRNA export physical 1 1 1 Affinity Capture-RNA
TRM3 YDL112W 2'-O-ribose methyltransferase physical 1 1 1 Affinity Capture-RNA
UBP1 YDL122W Ubiquitin-specific protease physical 1 1 1 Affinity Capture-RNA
YDL124W YDL124W NADPH-dependent alpha-keto amide reductase physical 1 1 1 Affinity Capture-RNA
STF1 YDL130W-A Protein involved in regulation of the mitochondrial F1F0-ATP synthase physical 1 1 1 Affinity Capture-RNA
VMA1 YDL185W Subunit A of the V1 peripheral membrane domain of V-ATPase physical 1 1 1 Affinity Capture-RNA
SEC31 YDL195W Component of the Sec13p-Sec31p complex of the COPII vesicle coat physical 1 1 1 Affinity Capture-RNA
SHS1 YDL225W Component of the septin ring that is required for cytokinesis physical 1 1 1 Affinity Capture-RNA
SSB1 YDL229W Cytoplasmic ATPase that is a ribosome-associated molecular chaperone physical 1 1 1 Affinity Capture-RNA
SSB1 YDL229W Cytoplasmic ATPase that is a ribosome-associated molecular chaperone genetic 1 1 1 Negative Genetic
YRB1 YDR002W Ran GTPase binding protein physical 1 1 1 Affinity Capture-RNA
SES1 YDR023W Cytosolic seryl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
TPI1 YDR050C Triose phosphate isomerase, abundant glycolytic enzyme physical 1 1 1 Affinity Capture-RNA
TPS2 YDR074W Phosphatase subunit of the trehalose-6-P synthase/phosphatase complex physical 1 1 1 Affinity Capture-RNA
SED1 YDR077W Major stress-induced structural GPI-cell wall glycoprotein physical 1 1 1 Affinity Capture-RNA
STN1 YDR082W Telomere end-binding and capping protein physical 1 1 1 Affinity Capture-RNA
SSS1 YDR086C Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p) physical 1 1 1 Affinity Capture-RNA
TRM1 YDR120C tRNA methyltransferase physical 1 1 1 Affinity Capture-RNA
TAF12 YDR145W Subunit (61/68 kDa) of TFIID and SAGA complexes physical 1 1 1 Affinity Capture-RNA
TRM82 YDR165W Noncatalytic subunit of a tRNA methyltransferase complex physical 1 1 1 Affinity Capture-RNA
SEC7 YDR170C Guanine nucleotide exchange factor (GEF) for ADP ribosylation factors physical 1 1 1 Affinity Capture-RNA
SUP35 YDR172W Translation termination factor eRF3 physical 1 1 1 Affinity Capture-RNA
SUP35 YDR172W Translation termination factor eRF3 genetic 1 1 1 Negative Genetic
SND1 YDR186C Protein involved in SRP-independent targeting of substrates to the ER physical 1 1 1 Affinity Capture-RNA
SND1 YDR186C Protein involved in SRP-independent targeting of substrates to the ER genetic 1 1 1 Negative Genetic
SEC26 YDR238C Essential beta-coat protein of the COPI coatomer physical 1 1 1 Affinity Capture-RNA
SEC26 YDR238C Essential beta-coat protein of the COPI coatomer genetic 1 1 1 Negative Genetic
SUM1 YDR310C Transcriptional repressor that regulates middle-sporulation genes physical 1 1 1 Affinity Capture-RNA
UTP4 YDR324C Subunit of U3-containing 90S preribosome and SSU processome complexes physical 1 1 1 Affinity Capture-RNA
YSP2 YDR326C Sterol-binding protein physical 1 1 1 Affinity Capture-RNA
SKP1 YDR328C Evolutionarily conserved kinetochore protein physical 1 1 1 Affinity Capture-RNA
TRR1 YDR353W Cytoplasmic thioredoxin reductase physical 1 1 1 Affinity Capture-RNA
SPC110 YDR356W Inner plaque spindle pole body (SPB) component physical 1 1 1 Affinity Capture-RNA
VPS74 YDR372C Golgi PI4K effector, PtdIns4P sensor, and retention receptor physical 1 1 1 Affinity Capture-RNA
SXM1 YDR395W Nuclear transport factor (karyopherin) physical 1 1 1 Affinity Capture-RNA
UTP5 YDR398W Subunit of U3-containing Small Subunit (SSU) processome complex physical 1 1 1 Affinity Capture-RNA
UTP5 YDR398W Subunit of U3-containing Small Subunit (SSU) processome complex genetic 1 1 1 Negative Genetic
TIF35 YDR429C eIF3g subunit of the eukaryotic translation initiation factor 3 (eIF3) physical 1 1 1 Affinity Capture-RNA
VPS72 YDR485C Htz1p-binding component of the SWR1 complex physical 1 1 1 Affinity Capture-RNA
VPS60 YDR486C Protein involved in late endosome to vacuole transport physical 1 1 1 Affinity Capture-RNA
YDR524C-B YDR524C-B Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
WBP1 YEL002C Beta subunit of the oligosaccharyl transferase glycoprotein complex physical 1 1 1 Affinity Capture-RNA
VAC8 YEL013W Vacuole-specific Myo2p receptor physical 1 1 1 Affinity Capture-RNA
SNU13 YEL026W RNA binding protein physical 1 1 1 Affinity Capture-RNA
VMA3 YEL027W Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase physical 1 1 1 Affinity Capture-RNA
UTR2 YEL040W Chitin transglycosylase physical 1 1 1 Affinity Capture-RNA
VMA8 YEL051W Subunit D of the V1 peripheral membrane domain of V-ATPase physical 1 1 1 Affinity Capture-RNA
VMA8 YEL051W Subunit D of the V1 peripheral membrane domain of V-ATPase genetic 1 1 1 Negative Genetic
SEC3 YER008C Subunit of the exocyst complex physical 1 1 1 Affinity Capture-RNA
VHR2 YER064C Non-essential nuclear protein physical 1 1 1 Affinity Capture-RNA
SER3 YER081W 3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase physical 1 1 1 Affinity Capture-RNA
UTP7 YER082C Nucleolar protein physical 1 1 1 Affinity Capture-RNA
YCK3 YER123W Palmitoylated vacuolar membrane-localized casein kinase I isoform physical 1 1 1 Affinity Capture-RNA
UBP3 YER151C Ubiquitin-specific protease that cleaves Ub-protein fusions physical 1 1 1 Affinity Capture-RNA
SPB4 YFL002C Putative ATP-dependent RNA helicase physical 1 1 1 Affinity Capture-RNA
VTC2 YFL004W Regulatory subunit of the vacuolar transporter chaperone (VTC) complex physical 1 1 1 Affinity Capture-RNA
SMC1 YFL008W Subunit of the multiprotein cohesin complex physical 1 1 1 Affinity Capture-RNA
WWM1 YFL010C WW domain containing protein of unknown function physical 1 1 1 Affinity Capture-RNA
STE2 YFL026W Receptor for alpha-factor pheromone physical 1 1 1 Affinity Capture-RNA
TUB2 YFL037W Beta-tubulin physical 1 1 1 Affinity Capture-RNA
UBP6 YFR010W Ubiquitin-specific protease physical 1 1 1 Affinity Capture-RNA
SCL1 YGL011C Alpha 1 subunit of the 20S proteasome physical 1 1 1 Affinity Capture-RNA
STT3 YGL022W Catalytic subunit of the oligosaccharyltransferase complex of the ER l physical 1 1 1 Affinity Capture-RNA
SCW11 YGL028C Cell wall protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
SGF73 YGL066W Subunit of DUBm module of SAGA and SLIK physical 1 1 1 Affinity Capture-RNA
TAF6 YGL112C Subunit (60 kDa) of TFIID and SAGA complexes physical 1 1 1 Affinity Capture-RNA
SEC27 YGL137W Essential beta'-coat protein of the COPI coatomer physical 1 1 1 Affinity Capture-RNA
SPT16 YGL207W Subunit of the heterodimeric FACT complex (Spt16p-Pob3p) physical 1 1 1 Affinity Capture-RNA
YPT32 YGL210W Rab family GTPase involved in the exocytic pathway physical 1 1 1 Affinity Capture-RNA
SEC15 YGL233W Essential 113 kDa subunit of the exocyst complex physical 1 1 1 Affinity Capture-RNA
TFG2 YGR005C TFIIF (Transcription Factor II) middle subunit physical 1 1 1 Affinity Capture-RNA
SEC9 YGR009C t-SNARE protein required for secretory vesicle-plasma membrane fusion physical 1 1 1 Affinity Capture-RNA
YGR017W YGR017W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YGR026W YGR026W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
TIM21 YGR033C Nonessential component of the TIM23 complex physical 1 1 1 Affinity Capture-RNA
YGR054W YGR054W Eukaryotic initiation factor eIF2A physical 1 1 1 Affinity Capture-RNA
UTP22 YGR090W Component of the small-subunit processome physical 1 1 1 Affinity Capture-RNA
VAS1 YGR094W Mitochondrial and cytoplasmic valyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
VOA1 YGR106C ER protein that functions in assembly of the V0 sector of V-ATPase physical 1 1 1 Affinity Capture-RNA
VOA1 YGR106C ER protein that functions in assembly of the V0 sector of V-ATPase genetic 1 1 1 Synthetic Growth Defect
SPT6 YGR116W Nucleosome remodeling protein physical 1 1 1 Affinity Capture-RNA
UTP8 YGR128C Nucleolar protein required for export of tRNAs from the nucleus physical 1 1 1 Affinity Capture-RNA
YGR130C YGR130C Component of the eisosome with unknown function physical 1 1 1 Affinity Capture-RNA
TPO2 YGR138C Polyamine transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
UBR1 YGR184C E3 ubiquitin ligase (N-recognin) physical 1 1 1 Affinity Capture-RNA
TYS1 YGR185C Cytoplasmic tyrosyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
TYS1 YGR185C Cytoplasmic tyrosyl-tRNA synthetase genetic 1 1 1 Negative Genetic
TFG1 YGR186W TFIIF (Transcription Factor II) largest subunit physical 1 1 1 Affinity Capture-RNA
TDH3 YGR192C Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 3 physical 1 1 1 Affinity Capture-RNA
ZPR1 YGR211W Essential protein with two zinc fingers physical 1 1 1 Affinity Capture-RNA
SMI1 YGR229C Protein involved in the regulation of cell wall synthesis physical 1 1 1 Affinity Capture-RNA
YHB1 YGR234W Nitric oxide oxidoreductase physical 1 1 1 Affinity Capture-RNA
SDA1 YGR245C Protein required for actin organization and passage through Start physical 1 1 1 Affinity Capture-RNA
YTA7 YGR270W Chromatin-binding ATPase that regulates histone gene expression physical 1 1 1 Affinity Capture-RNA
SCW4 YGR279C Cell wall protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
ZUO1 YGR285C Ribosome-associated chaperone physical 1 1 1 Affinity Capture-RNA
STE20 YHL007C Cdc42p-activated signal transducing kinase physical 1 1 1 Affinity Capture-RNA
TIM10 YHR005C-A Essential protein of the mitochondrial intermembrane space physical 1 1 1 Affinity Capture-RNA
SOD2 YHR008C Mitochondrial manganese superoxide dismutase physical 1 1 1 Affinity Capture-RNA
YSC84 YHR016C Actin-binding protein physical 1 1 1 Affinity Capture-RNA
YHR020W YHR020W Prolyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
VMA10 YHR039C-A Subunit G of the V1 peripheral membrane domain of V-ATPase physical 1 1 1 Affinity Capture-RNA
SSZ1 YHR064C Hsp70 protein that interacts with Zuo1p (a DnaJ homolog) physical 1 1 1 Affinity Capture-RNA
TRA1 YHR099W Subunit of SAGA and NuA4 histone acetyltransferase complexes physical 1 1 1 Affinity Capture-RNA
UTP9 YHR196W Nucleolar protein physical 1 1 1 Affinity Capture-RNA
SEC28 YIL076W Epsilon-COP subunit of the coatomer physical 1 1 1 Affinity Capture-RNA
THS1 YIL078W Threonyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
SEC24 YIL109C Component of the Sec23p-Sec24p heterodimer of the COPII vesicle coat physical 1 1 1 Affinity Capture-RNA
STH1 YIL126W ATPase component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
TPM2 YIL138C Minor isoform of tropomyosin physical 1 1 1 Affinity Capture-RNA
SSL2 YIL143C Component of RNA polymerase transcription factor TFIIH holoenzyme physical 1 1 1 Affinity Capture-RNA
SLN1 YIL147C Transmembrane histidine phosphotransfer kinase and osmosensor physical 1 1 1 Affinity Capture-RNA
STS1 YIR011C Protein required for localizing proteasomes to the nucleus physical 1 1 1 Affinity Capture-RNA
SQT1 YIR012W Specific assembly chaperone for ribosomal protein Rpl10p physical 1 1 1 Affinity Capture-RNA
VTC4 YJL012C Vacuolar membrane polyphosphate polymerase physical 1 1 1 Affinity Capture-RNA
TIM54 YJL054W Component of the mitochondrial TIM22 complex physical 1 1 1 Affinity Capture-RNA
SMC3 YJL074C Subunit of the multiprotein cohesin complex physical 1 1 1 Affinity Capture-RNA
TRL1 YJL087C tRNA ligase physical 1 1 1 Affinity Capture-RNA
URA2 YJL130C Bifunctional carbamoylphosphate synthetase/aspartate transcarbamylase physical 1 1 1 Affinity Capture-RNA
TIF2 YJL138C Translation initiation factor eIF4A physical 1 1 1 Affinity Capture-RNA
SNA3 YJL151C Protein involved in efficient MVB sorting of proteins to the vacuole physical 1 1 1 Affinity Capture-RNA
SWI3 YJL176C Subunit of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
SUI2 YJR007W Alpha subunit of the translation initiation factor eIF2 physical 1 1 1 Affinity Capture-RNA
SUI2 YJR007W Alpha subunit of the translation initiation factor eIF2 genetic 1 1 1 Negative Genetic
TDH2 YJR009C Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 2 physical 1 1 1 Affinity Capture-RNA
SSC1 YJR045C Hsp70 family ATPase physical 1 1 1 Affinity Capture-RNA
UTR1 YJR049C ATP-NADH kinase physical 1 1 1 Affinity Capture-RNA
TOR1 YJR066W PIK-related protein kinase and rapamycin target physical 1 1 1 Affinity Capture-RNA
YJR120W YJR120W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
VPS70 YJR126C Protein of unknown function involved in vacuolar protein sorting physical 1 1 1 Affinity Capture-RNA
SGM1 YJR134C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
UFD4 YKL010C Ubiquitin-protein ligase (E3) physical 1 1 1 Affinity Capture-RNA
URB1 YKL014C Protein required for the normal accumulation of 25S and 5.8S rRNAs physical 1 1 1 Affinity Capture-RNA
SKA1 YKL023W SKI complex-associated protein physical 1 1 1 Affinity Capture-RNA
UGP1 YKL035W UDP-glucose pyrophosphorylase (UGPase) physical 1 1 1 Affinity Capture-RNA
TMA19 YKL056C Protein that associates with ribosomes physical 1 1 1 Affinity Capture-RNA
YKL063C YKL063C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YNK1 YKL067W Nucleoside diphosphate kinase physical 1 1 1 Affinity Capture-RNA
SMY1 YKL079W Kinesin-like myosin passenger-protein physical 1 1 1 Affinity Capture-RNA
VMA5 YKL080W Subunit C of the V1 peripheral membrane domain of V-ATPase physical 1 1 1 Affinity Capture-RNA
TEF4 YKL081W Gamma subunit of translational elongation factor eEF1B physical 1 1 1 Affinity Capture-RNA
TEF4 YKL081W Gamma subunit of translational elongation factor eEF1B genetic 1 1 1 Synthetic Haploinsufficiency
SRP21 YKL122C Subunit of the signal recognition particle (SRP) physical 1 1 1 Affinity Capture-RNA
TPK3 YKL166C cAMP-dependent protein kinase catalytic subunit physical 1 1 1 Affinity Capture-RNA
STE6 YKL209C Plasma membrane ATP-binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
UBA1 YKL210W Ubiquitin activating enzyme (E1) physical 1 1 1 Affinity Capture-RNA
URA1 YKL216W Dihydroorotate dehydrogenase physical 1 1 1 Affinity Capture-RNA
VPS1 YKR001C Dynamin-like GTPase required for vacuolar sorting physical 1 1 1 Affinity Capture-RNA
YKR018C YKR018C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SPO14 YKR031C Phospholipase D physical 1 1 1 Affinity Capture-RNA
TIF1 YKR059W Translation initiation factor eIF4A physical 1 1 1 Affinity Capture-RNA
SIS2 YKR072C Negative regulatory subunit of protein phosphatase 1 (Ppz1p) physical 1 1 1 Affinity Capture-RNA
YKR075C YKR075C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SRP40 YKR092C Nucleolar serine-rich protein physical 1 1 1 Affinity Capture-RNA
SKG1 YKR100C Transmembrane protein with a role in cell wall polymer composition physical 1 1 1 Affinity Capture-RNA
SOF1 YLL011W Protein required for biogenesis of 40S (small) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
SPA2 YLL021W Component of the polarisome physical 1 1 1 Affinity Capture-RNA
SSA2 YLL024C HSP70 family ATP-binding protein physical 1 1 1 Affinity Capture-RNA
VPS13 YLL040C Lipid transport protein involved in prospore membrane morphogenesis physical 1 1 1 Affinity Capture-RNA
SDH2 YLL041C Iron-sulfur protein subunit of succinate dehydrogenase physical 1 1 1 Affinity Capture-RNA
YBT1 YLL048C Transporter of the ATP-binding cassette (ABC) family physical 1 1 1 Affinity Capture-RNA
UBR2 YLR024C Cytoplasmic ubiquitin-protein ligase (E3) physical 1 1 1 Affinity Capture-RNA
STU2 YLR045C Microtubule polymerase of the XMAP215/Dis1 family physical 1 1 1 Affinity Capture-RNA
SHM2 YLR058C Cytosolic serine hydroxymethyltransferase physical 1 1 1 Affinity Capture-RNA
SMC4 YLR086W Subunit of the condensin complex physical 1 1 1 Affinity Capture-RNA
YPS1 YLR120C Aspartic protease physical 1 1 1 Affinity Capture-RNA
STM1 YLR150W Protein required for optimal translation under nutrient stress physical 1 1 1 Affinity Capture-RNA
YLR154C-G YLR154C-G Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SWI6 YLR182W Transcription cofactor physical 1 1 1 Affinity Capture-RNA
SEC13 YLR208W Structural component of 3 complexes physical 1 1 1 Affinity Capture-RNA
UTP13 YLR222C Nucleolar protein physical 1 1 1 Affinity Capture-RNA
YEF3 YLR249W Translation elongation factor 3 physical 1 1 1 Affinity Capture-RNA
SSP120 YLR250W Protein packaged into COPII vesicles for ER to Golgi trafficking physical 1 1 1 Affinity Capture-RNA
YHC1 YLR298C Component of the U1 snRNP complex required for pre-mRNA splicing physical 1 1 1 Affinity Capture-RNA
TAL1 YLR354C Transaldolase, enzyme in the non-oxidative pentose phosphate pathway physical 1 1 1 Affinity Capture-RNA
SKI2 YLR398C Ski complex component and putative RNA helicase physical 1 1 1 Affinity Capture-RNA
UTP21 YLR409C Subunit of U3-containing 90S preribosome and SSU processome complexes physical 1 1 1 Affinity Capture-RNA
VIP1 YLR410W Bifunctional inositol pyrophosphate kinase and phosphatase physical 1 1 1 Affinity Capture-RNA
SEN1 YLR430W ATP-dependent 5' to 3' RNA/DNA and DNA helicase physical 1 1 1 Affinity Capture-RNA
SIR3 YLR442C Silencing protein physical 1 1 1 Affinity Capture-RNA
VMA6 YLR447C Subunit d of the V0 integral membrane domain of V-ATPase physical 1 1 1 Affinity Capture-RNA
SST2 YLR452C GTPase-activating protein for Gpa1p physical 1 1 1 Affinity Capture-RNA
YPT7 YML001W Rab family GTPase physical 1 1 1 Affinity Capture-RNA
SPT5 YML010W Spt4p/5p (DSIF) transcription elongation factor complex subunit physical 1 1 1 Affinity Capture-RNA
TSA1 YML028W Thioredoxin peroxidase physical 1 1 1 Affinity Capture-RNA
TSA1 YML028W Thioredoxin peroxidase genetic 1 1 1 Synthetic Growth Defect
USA1 YML029W Scaffold subunit of the Hrd1p ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
TCB3 YML072C Cortical ER protein involved in ER-plasma membrane tethering physical 1 1 1 Affinity Capture-RNA
UTP14 YML093W Subunit of U3-containing Small Subunit (SSU) processome complex physical 1 1 1 Affinity Capture-RNA
VAN1 YML115C Component of the mannan polymerase I physical 1 1 1 Affinity Capture-RNA
YMR027W YMR027W A metal-dependent phosphatase, part of the DUF89 protein family physical 1 1 1 Affinity Capture-RNA
SUB1 YMR039C Transcriptional regulator physical 1 1 1 Affinity Capture-RNA
STV1 YMR054W Subunit a of the vacuolar-ATPase V0 domain physical 1 1 1 Affinity Capture-RNA
SEC14 YMR079W Phosphatidylinositol/phosphatidylcholine transfer protein physical 1 1 1 Affinity Capture-RNA
SEG1 YMR086W Component of eisosome required for proper eisosome assembly physical 1 1 1 Affinity Capture-RNA
UTP15 YMR093W Nucleolar protein physical 1 1 1 Affinity Capture-RNA
TIF34 YMR146C eIF3i subunit of the eukaryotic translation initiation factor 3 (eIF3) physical 1 1 1 Affinity Capture-RNA
VTI1 YMR197C Protein involved in cis-Golgi membrane traffic physical 1 1 1 Affinity Capture-RNA
SKY1 YMR216C SR protein kinase (SRPK) physical 1 1 1 Affinity Capture-RNA
TIF11 YMR260C Translation initiation factor eIF1A physical 1 1 1 Affinity Capture-RNA
TDA1 YMR291W Protein kinase of unknown cellular role physical 1 1 1 Affinity Capture-RNA
SCW10 YMR305C Cell wall protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
SIS1 YNL007C Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p physical 1 1 1 Affinity Capture-RNA
YDJ1 YNL064C Type I HSP40 co-chaperone physical 1 1 1 Affinity Capture-RNA
TOM7 YNL070W Component of the TOM (translocase of outer membrane) complex physical 1 1 1 Affinity Capture-RNA
TPM1 YNL079C Major isoform of tropomyosin physical 1 1 1 Affinity Capture-RNA
TCB2 YNL087W ER protein involved in ER-plasma membrane tethering physical 1 1 1 Affinity Capture-RNA
TOP2 YNL088W Topoisomerase II physical 1 1 1 Affinity Capture-RNA
YNL097C-B YNL097C-B Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
TOM70 YNL121C Component of the TOM (translocase of outer membrane) complex physical 1 1 1 Affinity Capture-RNA
TOM22 YNL131W Component of the TOM (Translocase of Outer Membrane) complex physical 1 1 1 Affinity Capture-RNA
SRV2 YNL138W CAP (cyclase-associated protein) physical 1 1 1 Affinity Capture-RNA
THO2 YNL139C Subunit of the THO complex physical 1 1 1 Affinity Capture-RNA
UBP10 YNL186W Ubiquitin-specific protease, deubiquitinates Ub-protein moieties physical 1 1 1 Affinity Capture-RNA
SRP1 YNL189W Karyopherin alpha homolog physical 1 1 1 Affinity Capture-RNA
YNL190W YNL190W Hydrophilin essential in desiccation-rehydration process physical 1 1 1 Affinity Capture-RNA
YNL208W YNL208W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
URE2 YNL229C Nitrogen catabolite repression transcriptional regulator physical 1 1 1 Affinity Capture-RNA
ZWF1 YNL241C Glucose-6-phosphate dehydrogenase (G6PD) physical 1 1 1 Affinity Capture-RNA
SLA2 YNL243W Adaptor protein that links actin to clathrin and endocytosis physical 1 1 1 Affinity Capture-RNA
TEX1 YNL253W Protein involved in mRNA export physical 1 1 1 Affinity Capture-RNA
SEC2 YNL272C Guanyl-nucleotide exchange factor for the small G-protein Sec4p physical 1 1 1 Affinity Capture-RNA
SEC21 YNL287W Gamma subunit of coatomer physical 1 1 1 Affinity Capture-RNA
URK1 YNR012W Uridine/cytidine kinase physical 1 1 1 Affinity Capture-RNA
YNR021W YNR021W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SSK2 YNR031C MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway physical 1 1 1 Affinity Capture-RNA
SIN3 YOL004W Component of both the Rpd3S and Rpd3L histone deacetylase complexes physical 1 1 1 Affinity Capture-RNA
SMC5 YOL034W Subunit of the SMC5-SMC6 complex physical 1 1 1 Affinity Capture-RNA
YOL036W YOL036W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
WRS1 YOL097C Cytoplasmic tryptophanyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
SDD3 YOL098C Putative metalloprotease physical 1 1 1 Affinity Capture-RNA
UTP23 YOR004W Component of the small subunit processome physical 1 1 1 Affinity Capture-RNA
TSR3 YOR006C Protein required for 20S pre-rRNA processing physical 1 1 1 Affinity Capture-RNA
SGT2 YOR007C Glutamine-rich cytoplasmic cochaperone physical 1 1 1 Affinity Capture-RNA
STI1 YOR027W Evolutionarily-conserved Hsp90 cochaperone physical 1 1 1 Affinity Capture-RNA
TMC1 YOR052C AN1-type zinc finger protein, effector of proteotoxic stress response physical 1 1 1 Affinity Capture-RNA
UFE1 YOR075W t-SNARE protein required for retrograde vesicular traffic physical 1 1 1 Affinity Capture-RNA
TCB1 YOR086C Lipid-binding ER protein involved in ER-plasma membrane tethering physical 1 1 1 Affinity Capture-RNA
VPS21 YOR089C Endosomal Rab family GTPase physical 1 1 1 Affinity Capture-RNA
SLP1 YOR154W Glycosylated integral ER membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
TUF1 YOR187W Mitochondrial translation elongation factor Tu (EF-Tu) physical 1 1 1 Affinity Capture-RNA
SLK19 YOR195W Kinetochore-associated protein physical 1 1 1 Affinity Capture-RNA
STE4 YOR212W G protein beta subunit physical 1 1 1 Affinity Capture-RNA
VPH1 YOR270C Subunit a of the vacuolar-ATPase V0 domain physical 1 1 1 Affinity Capture-RNA
VPH1 YOR270C Subunit a of the vacuolar-ATPase V0 domain genetic 1 1 1 Negative Genetic
SNF2 YOR290C Catalytic subunit of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
VMA4 YOR332W Subunit E of the V1 domain of the vacuolar H+-ATPase (V-ATPase) physical 1 1 1 Affinity Capture-RNA
TYE7 YOR344C Serine-rich protein that contains a bHLH DNA binding motif physical 1 1 1 Affinity Capture-RNA
ULA1 YPL003W Protein that activates Rub1p (NEDD8) before neddylation physical 1 1 1 Affinity Capture-RNA
TFC8 YPL007C Subunit of RNA polymerase III transcription initiation factor complex physical 1 1 1 Affinity Capture-RNA
VTC3 YPL019C Regulatory subunit of the vacuolar transporter chaperone (VTC) complex physical 1 1 1 Affinity Capture-RNA
ULP1 YPL020C Protease that specifically cleaves Smt3p protein conjugates physical 1 1 1 Affinity Capture-RNA
SVL3 YPL032C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
TIM50 YPL063W Essential component of the TIM23 complex physical 1 1 1 Affinity Capture-RNA
SEC16 YPL085W COPII vesicle coat protein required for ER transport vesicle budding physical 1 1 1 Affinity Capture-RNA
SEC62 YPL094C Essential subunit of Sec63 complex physical 1 1 1 Affinity Capture-RNA
SYH1 YPL105C Protein of unknown function that influences nuclear pore distribution physical 1 1 1 Affinity Capture-RNA
SSE1 YPL106C ATPase component of heat shock protein Hsp90 chaperone complex physical 1 1 1 Affinity Capture-RNA
TFB2 YPL122C Subunit of TFIIH and nucleotide excision repair factor 3 complexes physical 1 1 1 Affinity Capture-RNA
TAF14 YPL129W Subunit of TFIID, TFIIF, INO80, SWI/SNF, and NuA3 complexes physical 1 1 1 Affinity Capture-RNA
SVS1 YPL163C Cell wall and vacuolar protein physical 1 1 1 Affinity Capture-RNA
YPL199C YPL199C Protein involved in nonstop mRNA decay physical 1 1 1 Affinity Capture-RNA
SSO1 YPL232W Plasma membrane t-SNARE physical 1 1 1 Affinity Capture-RNA
SUI3 YPL237W Beta subunit of the translation initiation factor eIF2 physical 1 1 1 Affinity Capture-RNA
SRP68 YPL243W Core component of the signal recognition particle (SRP) complex physical 1 1 1 Affinity Capture-RNA
TIF6 YPR016C Constituent of 66S pre-ribosomal particles physical 1 1 1 Affinity Capture-RNA
SPO24 YPR036W-A Small (67 amino acids) protein involved in sporulation physical 1 1 1 Affinity Capture-RNA
TIF5 YPR041W Translation initiation factor eIF5 physical 1 1 1 Affinity Capture-RNA
SEC8 YPR055W Essential 121 kDa subunit of the exocyst complex physical 1 1 1 Affinity Capture-RNA
TKL1 YPR074C Transketolase physical 1 1 1 Affinity Capture-RNA
YPR097W YPR097W Protein that contains a PX domain and binds phosphoinositides physical 1 1 1 Affinity Capture-RNA
YLH47 YPR125W Mitochondrial inner membrane protein physical 1 1 1 Affinity Capture-RNA
SPN1 YPR133C Protein involved in RNA polymerase II transcription physical 1 1 1 Affinity Capture-RNA
YPR148C YPR148C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
TDA6 YPR157W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
TIF3 YPR163C Translation initiation factor eIF-4B physical 1 1 1 Affinity Capture-RNA
SKI3 YPR189W Ski complex component and TPR protein physical 1 1 1 Affinity Capture-RNA
SKI3 YPR189W Ski complex component and TPR protein genetic 1 1 1 Dosage Rescue
SCD6 YPR129W Repressor of translation initiation physical 1 1 1 Affinity Capture-MS
VAM6 YDL077C Guanine nucleotide exchange factor for the GTPase Gtr1p physical 1 1 1 Affinity Capture-MS
TMA108 YIL137C Ribosome-associated, nascent chain binding factor physical 1 1 1 Affinity Capture-MS
TMA46 YOR091W Protein of unknown function that associates with translating ribosomes physical 1 1 1 Affinity Capture-MS
TFC6 YDR362C Subunit of RNA polymerase III transcription initiation factor complex physical 1 1 1 Affinity Capture-MS
TAD2 YJL035C Subunit of tRNA-specific adenosine-34 deaminase genetic 1 1 1 Negative Genetic
YRB2 YIL063C Protein of unknown function genetic 1 1 1 Negative Genetic
WHI3 YNL197C RNA binding protein that modulates mRNA stability genetic 1 1 1 Negative Genetic
THP2 YHR167W Subunit of the THO and TREX complexes genetic 1 1 1 Negative Genetic
TRM7 YBR061C 2'-O-ribose methyltransferase genetic 1 1 1 Positive Genetic
SFT2 YBL102W Tetra-spanning membrane protein found mostly in the late Golgi genetic 1 1 1 Negative Genetic
SRP101 YDR292C Signal recognition particle (SRP) receptor alpha subunit genetic 1 1 1 Negative Genetic
SIN4 YNL236W Subunit of the RNA polymerase II mediator complex genetic 1 1 1 Positive Genetic
TLG2 YOL018C Syntaxin-like t-SNARE genetic 1 1 1 Negative Genetic
SLX5 YDL013W Subunit of the Slx5-Slx8 SUMO-targeted Ub ligase (STUbL) complex genetic 1 1 1 Synthetic Growth Defect
SMD2 YLR275W Core Sm protein Sm D2 genetic 1 1 1 Positive Genetic
SSD1 YDR293C Translational repressor genetic 1 1 1 Positive Genetic
SIF2 YBR103W WD40 repeat-containing subunit of Set3C histone deacetylase complex genetic 1 1 1 Positive Genetic
SEC1 YDR164C Sm-like protein involved in docking and fusion of exocytic vesicles genetic 1 1 1 Negative Genetic
SNM1 YDR478W Ribonuclease MRP complex subunit genetic 1 1 1 Negative Genetic
SRP102 YKL154W Signal recognition particle (SRP) receptor beta subunit genetic 1 1 1 Negative Genetic
SEC12 YNR026C Guanine nucleotide exchange factor (GEF) genetic 1 1 1 Negative Genetic
SGT1 YOR057W Cochaperone protein genetic 1 1 1 Negative Genetic
TAD3 YLR316C Subunit of tRNA-specific adenosine-34 deaminase genetic 1 1 1 Negative Genetic
TRS20 YBR254C Core component of transport protein particle (TRAPP) complexes I-III genetic 1 1 1 Negative Genetic
SNU56 YDR240C Component of U1 snRNP required for mRNA splicing via spliceosome genetic 1 1 1 Negative Genetic
TFB1 YDR311W Subunit of TFIIH and nucleotide excision repair factor 3 complexes genetic 1 1 1 Negative Genetic
SSL1 YLR005W Subunit of the core form of RNA polymerase transcription factor TFIIH genetic 1 1 1 Negative Genetic
SDO1 YLR022C Guanine nucleotide exchange factor (GEF) for Ria1p genetic 1 1 1 Negative Genetic
SUA7 YPR086W Transcription factor TFIIB genetic 1 1 1 Negative Genetic
VPS54 YDR027C Component of the GARP (Golgi-associated retrograde protein) complex genetic 1 1 1 Negative Genetic
VPS52 YDR484W Component of the GARP (Golgi-associated retrograde protein) complex genetic 1 1 1 Negative Genetic
VPS8 YAL002W Membrane-binding component of the CORVET complex genetic 1 1 1 Negative Genetic
VPS53 YJL029C Component of the GARP (Golgi-associated retrograde protein) complex genetic 1 1 1 Negative Genetic
STB5 YHR178W Transcription factor genetic 1 1 1 Negative Genetic
SND2 YLR065C Protein involved in SRP-independent targeting of substrates to the ER genetic 1 1 1 Negative Genetic
YPT6 YLR262C Rab family GTPase genetic 1 1 1 Negative Genetic
SMA2 YML066C Meiosis-specific prospore membrane protein genetic 1 1 1 Negative Genetic
YMR321C YMR321C Putative protein of unknown function genetic 1 1 1 Negative Genetic
YOR034C-A YOR034C-A Putative protein of unknown function genetic 1 1 1 Negative Genetic
VHS3 YOR054C Negative regulatory subunit of protein phosphatase 1 Ppz1p genetic 1 1 1 Negative Genetic
YTA6 YPL074W Putative ATPase of the CDC48/PAS1/SEC18 (AAA) family genetic 1 1 1 Negative Genetic
SGS1 YMR190C RecQ family nucleolar DNA helicase genetic 1 1 1 Negative Genetic
MGA2 YIR033W ER membrane protein involved in regulation of OLE1 transcription physical 1 1 1 Affinity Capture-RNA
NEW1 YPL226W Translation termination and ribosome biogenesis factor physical 1 1 1 Affinity Capture-RNA
GLN1 YPR035W Glutamine synthetase (GS) physical 1 1 1 Affinity Capture-RNA
MCM2 YBL023C Protein involved in DNA replication physical 1 1 1 Affinity Capture-RNA
DRE2 YKR071C Component of the cytosolic Fe-S protein assembly (CIA) machinery physical 1 1 1 Affinity Capture-RNA
RPT4 YOR259C ATPase of the 19S regulatory particle of the 26S proteasome physical 1 1 1 Affinity Capture-RNA
RPT4 YOR259C ATPase of the 19S regulatory particle of the 26S proteasome genetic 1 1 1 Positive Genetic
HSE1 YHL002W Subunit of the endosomal Vps27p-Hse1p complex physical 1 1 1 Two-hybrid
FUN30 YAL019W Snf2p family member with ATP-dependent chromatin remodeling activity physical 1 1 1 Affinity Capture-RNA
DRS2 YAL026C Trans-golgi network aminophospholipid translocase (flippase) physical 1 1 1 Affinity Capture-RNA
PIN4 YBL051C Protein involved in G2/M phase progression and response to DNA damage physical 1 1 1 Affinity Capture-RNA
PNO1 YOR145C Essential nucleolar protein required for pre-18S rRNA processing physical 1 1 1 Affinity Capture-RNA
ROK1 YGL171W RNA-dependent ATPase physical 1 1 1 Affinity Capture-RNA
ATP2 YJR121W Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
CDC13 YDL220C Single stranded DNA-binding protein found at TG1-3 telomere G-tails genetic 1 1 1 Negative Genetic
EDC3 YEL015W Non-essential conserved protein with a role in mRNA decapping physical 1 1 1 Affinity Capture-RNA
EGD2 YHR193C Alpha subunit of the nascent polypeptide-associated complex (NAC) physical 1 1 1 Affinity Capture-MS
ABP1 YCR088W Actin-binding protein of the cortical actin cytoskeleton physical 1 1 1 Affinity Capture-RNA
GAS1 YMR307W Beta-1,3-glucanosyltransferase required for cell wall assembly physical 1 1 1 Affinity Capture-RNA
ACO1 YLR304C Aconitase physical 1 1 1 Affinity Capture-RNA
FAR8 YMR029C Protein involved in recovery from arrest in response to pheromone physical 1 1 1 Affinity Capture-RNA
LSP1 YPL004C Eisosome core component physical 1 1 1 Affinity Capture-RNA
PHO84 YML123C High-affinity inorganic phosphate (Pi) transporter physical 1 1 1 Affinity Capture-RNA
FIN1 YDR130C Spindle pole body-related intermediate filament protein physical 1 1 1 Affinity Capture-Western
MDH1 YKL085W Mitochondrial malate dehydrogenase physical 1 1 1 Affinity Capture-RNA
PYC2 YBR218C Pyruvate carboxylase isoform physical 1 1 1 Affinity Capture-RNA
GND1 YHR183W 6-phosphogluconate dehydrogenase (decarboxylating) physical 1 1 1 Affinity Capture-RNA
HYP2 YEL034W Translation elongation factor eIF-5A physical 1 1 1 Affinity Capture-RNA
PHO85 YPL031C Cyclin-dependent kinase physical 1 1 1 Biochemical Activity
RNR2 YJL026W Ribonucleotide-diphosphate reductase (RNR), small subunit physical 1 1 1 Affinity Capture-RNA
PPQ1 YPL179W Protein phosphatase that regulates the mating response physical 1 1 1 Affinity Capture-RNA
GPP1 YIL053W Constitutively expressed DL-glycerol-3-phosphate phosphatase physical 1 1 1 Affinity Capture-RNA
ARF1 YDL192W ADP-ribosylation factor physical 1 1 1 Affinity Capture-RNA
IDH1 YNL037C Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase physical 1 1 1 Affinity Capture-RNA
PRB1 YEL060C Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity physical 1 1 1 Affinity Capture-RNA
NMD5 YJR132W Karyopherin physical 1 1 1 Affinity Capture-RNA
SAC6 YDR129C Fimbrin, actin-bundling protein physical 1 1 1 Affinity Capture-RNA
HTB1 YDR224C Histone H2B physical 1 1 1 Affinity Capture-RNA
HTB1 YDR224C Histone H2B genetic 1 1 1 Positive Genetic
AHP1 YLR109W Thiol-specific peroxiredoxin physical 1 1 1 Affinity Capture-RNA
DPS1 YLL018C Aspartyl-tRNA synthetase, primarily cytoplasmic physical 1 1 1 Affinity Capture-RNA
GSP1 YLR293C Ran GTPase physical 1 1 1 Affinity Capture-RNA
CDC53 YDL132W Cullin physical 1 1 1 Affinity Capture-RNA
GRR1 YJR090C F-box protein component of an SCF ubiquitin-ligase complex physical 1 1 1 Affinity Capture-RNA
PBS2 YJL128C MAP kinase kinase of the HOG signaling pathway physical 1 1 1 Affinity Capture-RNA
GSF2 YML048W Endoplasmic reticulum (ER) localized integral membrane protein physical 1 1 1 Affinity Capture-RNA
FET3 YMR058W Ferro-O2-oxidoreductase physical 1 1 1 Affinity Capture-RNA
FAA4 YMR246W Long chain fatty acyl-CoA synthetase physical 1 1 1 Affinity Capture-RNA
ARO4 YBR249C 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase physical 1 1 1 Affinity Capture-RNA
OYE2 YHR179W Conserved NADPH oxidoreductase containing flavin mononucleotide (FMN) physical 1 1 1 Affinity Capture-RNA
POR1 YNL055C Mitochondrial porin (voltage-dependent anion channel) physical 1 1 1 Affinity Capture-RNA
ILV5 YLR355C Acetohydroxyacid reductoisomerase and mtDNA binding protein physical 1 1 1 Affinity Capture-RNA
RVS161 YCR009C Amphiphysin-like lipid raft protein physical 1 1 1 Affinity Capture-RNA
PMA1 YGL008C Plasma membrane P2-type H+-ATPase physical 1 1 1 Affinity Capture-RNA
GET2 YER083C Subunit of the GET complex genetic 1 1 1 Negative Genetic
PTC5 YOR090C Mitochondrial type 2C protein phosphatase (PP2C) physical 1 1 1 Affinity Capture-RNA
GLC8 YMR311C Regulatory subunit of protein phosphatase 1 (Glc7p) physical 1 1 1 Affinity Capture-RNA
PXR1 YGR280C Essential protein involved in rRNA and snoRNA maturation physical 1 1 1 Affinity Capture-RNA
CCT5 YJR064W Subunit of the cytosolic chaperonin Cct ring complex physical 1 1 1 Affinity Capture-RNA
EGD1 YPL037C Subunit beta1 of the nascent polypeptide-associated complex (NAC) physical 1 1 1 Affinity Capture-RNA
CDC9 YDL164C DNA ligase I found in nucleus and mitochondria genetic 1 1 1 Positive Genetic
ADK1 YDR226W Adenylate kinase, required for purine metabolism physical 1 1 1 Affinity Capture-RNA
PGM2 YMR105C Phosphoglucomutase physical 1 1 1 Affinity Capture-RNA
HSP104 YLL026W Disaggregase physical 1 1 1 Affinity Capture-RNA
RAS1 YOR101W GTPase involved in G-protein signaling in adenylate cyclase activation physical 1 1 1 Affinity Capture-RNA
PET9 YBL030C Major ADP/ATP carrier of the mitochondrial inner membrane physical 1 1 1 Affinity Capture-RNA
ARG4 YHR018C Argininosuccinate lyase physical 1 1 1 Affinity Capture-RNA
MAE1 YKL029C Mitochondrial malic enzyme physical 1 1 1 Affinity Capture-RNA
PBR1 YNL181W Putative oxidoreductase physical 1 1 1 Affinity Capture-RNA
PAC11 YDR488C Dynein intermediate chain, microtubule motor protein physical 1 1 1 Affinity Capture-RNA
DLD3 YEL071W 2-hydroxyglutarate transhydrogenase, and minor D-lactate dehydrogenase physical 1 1 1 Affinity Capture-RNA
ACS2 YLR153C Acetyl-coA synthetase isoform physical 1 1 1 Affinity Capture-RNA
ERG10 YPL028W Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase) physical 1 1 1 Affinity Capture-RNA
RHO1 YPR165W GTP-binding protein of the rho subfamily of Ras-like proteins physical 1 1 1 Affinity Capture-RNA
MRS6 YOR370C Rab escort protein physical 1 1 1 Affinity Capture-RNA
CDC20 YGL116W Activator of anaphase-promoting complex/cyclosome (APC/C) genetic 1 1 1 Negative Genetic
CCT3 YJL014W Subunit of the cytosolic chaperonin Cct ring complex physical 1 1 1 Affinity Capture-RNA
DUG2 YBR281C Component of glutamine amidotransferase (GATase II) physical 1 1 1 Affinity Capture-RNA
COS111 YBR203W Protein required for antifungal drug ciclopirox olamine resistance genetic 1 1 1 Negative Genetic
ADH3 YMR083W Mitochondrial alcohol dehydrogenase isozyme III physical 1 1 1 Affinity Capture-RNA
IMD4 YML056C Inosine monophosphate dehydrogenase physical 1 1 1 Affinity Capture-RNA
APE1 YKL103C Vacuolar aminopeptidase yscI physical 1 1 1 Affinity Capture-RNA
LSB1 YGR136W Negative regulator of actin nucleation-promoting factor activity physical 1 1 1 Affinity Capture-RNA
RSP5 YER125W NEDD4 family E3 ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
CDC60 YPL160W Cytosolic leucyl tRNA synthetase physical 1 1 1 Affinity Capture-RNA
ERG20 YJL167W Farnesyl pyrophosphate synthetase physical 1 1 1 Affinity Capture-RNA
RNA1 YMR235C GTPase activating protein (GAP) for Gsp1p physical 1 1 1 Affinity Capture-RNA
GPN3 YLR243W Putative GTPase with a role in biogenesis of RNA pol II and polIII genetic 1 1 1 Negative Genetic
HOM6 YJR139C Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase) physical 1 1 1 Affinity Capture-RNA
MAK11 YKL021C Protein involved in an early step of 60S ribosomal subunit biogenesis physical 1 1 1 Affinity Capture-RNA
SAH1 YER043C S-adenosyl-L-homocysteine hydrolase physical 1 1 1 Affinity Capture-RNA
ERG6 YML008C Delta(24)-sterol C-methyltransferase physical 1 1 1 Affinity Capture-RNA
MET6 YER091C Cobalamin-independent methionine synthase physical 1 1 1 Affinity Capture-RNA
NTF2 YER009W Nuclear envelope protein physical 1 1 1 Affinity Capture-RNA
FRS2 YFL022C Alpha subunit of cytoplasmic phenylalanyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
RPP0 YLR340W Conserved ribosomal protein P0 of the ribosomal stalk physical 1 1 1 Affinity Capture-RNA
PDX1 YGR193C E3-binding protein of the mitochondrial pyruvate dehydrogenase complex physical 1 1 1 Affinity Capture-RNA
KRI1 YNL308C Essential nucleolar protein required for 40S ribosome biogenesis physical 1 1 1 Affinity Capture-RNA
LAS1 YKR063C Endonuclease involved in pre-rRNA processing at both ends of ITS2 physical 1 1 1 Affinity Capture-MS
GIS4 YML006C CAAX box containing protein of unknown function physical 1 1 1 Affinity Capture-RNA
CHS1 YNL192W Chitin synthase I physical 1 1 1 Affinity Capture-RNA
ATE1 YGL017W Arginyl-tRNA-protein transferase physical 1 1 1 Affinity Capture-RNA
CTF4 YPR135W Chromatin-associated protein physical 1 1 1 Affinity Capture-RNA
DPB11 YJL090C DNA replication initiation protein genetic 1 1 1 Negative Genetic
LHS1 YKL073W Molecular chaperone of the endoplasmic reticulum lumen physical 1 1 1 Affinity Capture-RNA
MNN9 YPL050C Subunit of Golgi mannosyltransferase complex physical 1 1 1 Affinity Capture-RNA
ILV2 YMR108W Acetolactate synthase physical 1 1 1 Affinity Capture-RNA
LSC1 YOR142W Alpha subunit of succinyl-CoA ligase physical 1 1 1 Affinity Capture-RNA
ATG20 YDL113C Sorting nexin family member genetic 1 1 1 Negative Genetic
RGI1 YER067W Protein involved in energy metabolism under respiratory conditions physical 1 1 1 Affinity Capture-RNA
FPK1 YNR047W Ser/Thr protein kinase physical 1 1 1 Affinity Capture-RNA
NOP13 YNL175C Nucleolar protein found in preribosomal complexes physical 1 1 1 Affinity Capture-MS
MSS116 YDR194C Mitochondrial transcription elongation factor physical 1 1 1 Affinity Capture-RNA
ARF2 YDL137W ADP-ribosylation factor physical 1 1 1 Affinity Capture-RNA
ECM33 YBR078W GPI-anchored protein involved in efficient glucose uptake physical 1 1 1 Affinity Capture-RNA
NOP53 YPL146C Nucleolar protein physical 1 1 1 Affinity Capture-RNA
MDH2 YOL126C Cytoplasmic malate dehydrogenase physical 1 1 1 Affinity Capture-RNA
RTT103 YDR289C Protein involved in transcription termination by RNA polymerase II physical 1 1 1 Affinity Capture-RNA
NUP2 YLR335W Nucleoporin involved in nucleocytoplasmic transport physical 1 1 1 Affinity Capture-RNA
HMG2 YLR450W HMG-CoA reductase physical 1 1 1 Affinity Capture-RNA
MCK1 YNL307C Dual-specificity ser/thr and tyrosine protein kinase physical 1 1 1 Affinity Capture-RNA
MFB1 YDR219C Mitochondria-associated F-box protein physical 1 1 1 Affinity Capture-RNA
NDE1 YMR145C Mitochondrial external NADH dehydrogenase physical 1 1 1 Affinity Capture-RNA
APA1 YCL050C AP4A phosphorylase physical 1 1 1 Affinity Capture-RNA
EAP1 YKL204W eIF4E-associated protein, competes with eIF4G for binding to eIF4E physical 1 1 1 Affinity Capture-MS
DEF1 YKL054C RNAPII degradation factor physical 1 1 1 Affinity Capture-RNA
FUS3 YBL016W Mitogen-activated serine/threonine protein kinase involved in mating physical 1 1 1 Affinity Capture-RNA
PFU1 YDR306C F-box protein that regulates pheromone-dependent morphogenesis genetic 1 1 1 Negative Genetic
ALD5 YER073W Mitochondrial aldehyde dehydrogenase physical 1 1 1 Affinity Capture-RNA
ADH6 YMR318C NADPH-dependent medium chain alcohol dehydrogenase physical 1 1 1 Affinity Capture-RNA
PMI40 YER003C Mannose-6-phosphate isomerase physical 1 1 1 Affinity Capture-RNA
ARA1 YBR149W NADP+ dependent arabinose dehydrogenase physical 1 1 1 Affinity Capture-RNA
HOM2 YDR158W Aspartic beta semi-aldehyde dehydrogenase physical 1 1 1 Affinity Capture-RNA
CYS3 YAL012W Cystathionine gamma-lyase physical 1 1 1 Affinity Capture-RNA
MDH3 YDL078C Peroxisomal malate dehydrogenase physical 1 1 1 Affinity Capture-RNA
APE3 YBR286W Vacuolar aminopeptidase Y physical 1 1 1 Affinity Capture-RNA
CHZ1 YER030W Histone chaperone for Htz1p/H2A-H2B dimer physical 1 1 1 Affinity Capture-RNA
ERG11 YHR007C Lanosterol 14-alpha-demethylase physical 1 1 1 Affinity Capture-RNA
EXG1 YLR300W Major exo-1,3-beta-glucanase of the cell wall physical 1 1 1 Affinity Capture-RNA
MMS22 YLR320W Subunit of E3 ubiquitin ligase complex involved in replication repair physical 1 1 1 Affinity Capture-MS
DHR2 YKL078W Predominantly nucleolar DEAH-box ATP-dependent RNA helicase genetic 1 1 1 Negative Genetic
RPL5 YPL131W Ribosomal 60S subunit protein L5 physical 1 1 1 Affinity Capture-RNA
ATP7 YKL016C Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
NBP2 YDR162C Protein involved in the HOG (high osmolarity glycerol) pathway genetic 1 1 1 Positive Genetic
CUE5 YOR042W Ubiquitin-binding protein physical 1 1 1 Affinity Capture-RNA
DCK1 YLR422W Dock family protein (Dedicator Of CytoKinesis), homolog of human DOCK1 physical 1 1 1 Affinity Capture-RNA
PRS1 YKL181W 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase physical 1 1 1 Affinity Capture-RNA
DSL1 YNL258C Peripheral membrane protein needed for Golgi-to-ER retrograde traffic physical 1 1 1 Affinity Capture-RNA
ADE2 YOR128C Phosphoribosylaminoimidazole carboxylase physical 1 1 1 Affinity Capture-RNA
CSM1 YCR086W Nucleolar protein that mediates homolog segregation during meiosis I genetic 1 1 1 Negative Genetic
ENT3 YJR125C Protein containing an N-terminal epsin-like domain genetic 1 1 1 Negative Genetic
GDH1 YOR375C NADP(+)-dependent glutamate dehydrogenase physical 1 1 1 Affinity Capture-RNA
GFD1 YMR255W Coiled-coiled protein of unknown function physical 1 1 1 Affinity Capture-RNA
ACO2 YJL200C Putative mitochondrial aconitase isozyme physical 1 1 1 Affinity Capture-RNA
INO2 YDR123C Transcription factor genetic 1 1 1 Negative Genetic
KAR4 YCL055W Transcription factor required for response to pheromones physical 1 1 1 Affinity Capture-RNA
GCN4 YEL009C bZIP transcriptional activator of amino acid biosynthetic genes physical 1 1 1 Affinity Capture-RNA
MRP8 YKL142W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
HAA1 YPR008W Transcriptional activator involved in adaptation to weak acid stress physical 1 1 1 Affinity Capture-RNA
COG2 YGR120C Essential component of the conserved oligomeric Golgi complex genetic 1 1 1 Dosage Rescue
NUF2 YOL069W Component of the kinetochore-associated Ndc80 complex genetic 1 1 1 Negative Genetic
NUP157 YER105C Subunit of the inner ring of the nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
NUP57 YGR119C FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
NUP57 YGR119C FG-nucleoporin component of central core of the nuclear pore complex genetic 1 1 1 Positive Genetic
NDL1 YLR254C Homolog of nuclear distribution factor NudE genetic 1 1 1 Positive Genetic
MMR1 YLR190W Phosphorylated protein of the mitochondrial outer membrane physical 1 1 1 Affinity Capture-RNA
CLG1 YGL215W Cyclin-like protein that interacts with Pho85p physical 1 1 1 Affinity Capture-RNA
RGA1 YOR127W GTPase-activating protein for polarity-regulator Cdc42p (RhoGAP) physical 1 1 1 Affinity Capture-RNA
RPS26A YGL189C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPS26B YER131W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
GNP1 YDR508C Broad specificity amino acid permease physical 1 1 1 Affinity Capture-RNA
CDC34 YDR054C Ubiquitin-conjugating enzyme (E2) physical 1 1 1 Affinity Capture-RNA
COQ5 YML110C 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase physical 1 1 1 Affinity Capture-RNA
ISY1 YJR050W Member of the NineTeen Complex (NTC) genetic 1 1 1 Negative Genetic
ESL1 YIL151C hEST1A/B (SMG5/6)-like protein physical 1 1 1 Affinity Capture-RNA
RIB4 YOL143C Lumazine synthase (DMRL synthase) physical 1 1 1 Affinity Capture-RNA
NST1 YNL091W Translational inhibitor and suppressor of proteasome-assembly defects physical 1 1 1 Affinity Capture-RNA
DSE3 YOR264W Daughter cell-specific protein, may help establish daughter fate physical 1 1 1 Affinity Capture-RNA
COG4 YPR105C Essential component of the conserved oligomeric Golgi complex physical 1 1 1 Affinity Capture-RNA
COG4 YPR105C Essential component of the conserved oligomeric Golgi complex genetic 1 1 1 Negative Genetic
CEP3 YMR168C Essential kinetochore protein genetic 1 1 1 Positive Genetic
RPL4A YBR031W Ribosomal 60S subunit protein L4A physical 1 1 1 Affinity Capture-MS
RLP24 YLR009W Essential protein required for ribosomal large subunit biogenesis physical 1 1 1 Affinity Capture-RNA
RLP24 YLR009W Essential protein required for ribosomal large subunit biogenesis genetic 1 1 1 Negative Genetic
BMT5 YIL096C Methyltransferase required for m3U2634 methylation of the 25S rRNA physical 1 1 1 Affinity Capture-RNA
RPS13 YDR064W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-MS
RPS5 YJR123W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
CST6 YIL036W Basic leucine zipper (bZIP) transcription factor from ATF/CREB family physical 1 1 1 Affinity Capture-RNA
RPS24A YER074W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPS24A YER074W Protein component of the small (40S) ribosomal subunit genetic 1 1 1 Negative Genetic
CRP1 YHR146W Protein that binds to cruciform DNA structures physical 1 1 1 Affinity Capture-RNA
ARP5 YNL059C Nuclear actin-related protein involved in chromatin remodeling physical 1 1 1 Affinity Capture-RNA
IES3 YLR052W Subunit of the INO80 chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
MCM1 YMR043W Transcription factor physical 1 1 1 Affinity Capture-RNA
NOT5 YPR072W Component of the CCR4-NOT core complex, involved in mRNA decapping physical 1 1 1 Affinity Capture-RNA
CBF1 YJR060W Basic helix-loop-helix (bHLH) protein physical 1 1 1 Affinity Capture-RNA
CBF1 YJR060W Basic helix-loop-helix (bHLH) protein genetic 1 1 1 Negative Genetic
PHO4 YFR034C Basic helix-loop-helix (bHLH) transcription factor of the myc-family genetic 1 1 1 Negative Genetic
RPS8B YER102W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-MS
RPS11A YDR025W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPS1B YML063W Ribosomal protein of the small (40S) subunit physical 1 1 1 Affinity Capture-RNA
RPS7A YOR096W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-MS
RPS11B YBR048W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPS9B YBR189W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-MS
BUD4 YJR092W Anillin-like protein involved in bud-site selection physical 1 1 1 Affinity Capture-RNA
MOT2 YER068W Ubiquitin-protein ligase subunit of the CCR4-NOT complex physical 1 1 1 Affinity Capture-RNA
DBP5 YOR046C Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family physical 1 1 1 Affinity Capture-RNA
FRQ1 YDR373W N-myristoylated calcium-binding protein genetic 1 1 1 Negative Genetic
GIM4 YEL003W Subunit of the heterohexameric cochaperone prefoldin complex physical 1 1 1 Affinity Capture-RNA
BNI5 YNL166C Linker protein responsible for recruitment of myosin to the bud neck physical 1 1 1 Affinity Capture-RNA
HSP150 YJL159W O-mannosylated heat shock protein physical 1 1 1 Affinity Capture-RNA
HXK2 YGL253W Hexokinase isoenzyme 2 physical 1 1 1 Affinity Capture-RNA
MAD1 YGL086W Coiled-coil protein involved in spindle-assembly checkpoint physical 1 1 1 Affinity Capture-RNA
MCM3 YEL032W Protein involved in DNA replication physical 1 1 1 Affinity Capture-RNA
MTR2 YKL186C mRNA transport regulator physical 1 1 1 Affinity Capture-RNA
MYO3 YKL129C One of two type I myosins physical 1 1 1 Affinity Capture-RNA
PAN1 YIR006C Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p physical 1 1 1 Affinity Capture-RNA
PRK1 YIL095W Ser/Thr protein kinase physical 1 1 1 Affinity Capture-RNA
RFM1 YOR279C Component of the Sum1p-Rfm1p-Hst1p complex physical 1 1 1 Affinity Capture-RNA
RAP1 YNL216W Essential DNA-binding transcription regulator that binds many loci genetic 1 1 1 Negative Genetic
DPH1 YIL103W Protein required for synthesis of diphthamide physical 1 1 1 Affinity Capture-RNA
MRPS9 YBR146W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
PET123 YOR158W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
KAR2 YJL034W ATPase involved in protein import into the ER physical 1 1 1 Affinity Capture-RNA
NUP170 YBL079W Subunit of inner ring of nuclear pore complex (NPC) genetic 1 1 1 Positive Genetic
ERV46 YAL042W Protein localized to COPII-coated vesicles physical 1 1 1 Affinity Capture-RNA
MPT5 YGL178W mRNA-binding protein of the PUF family physical 1 1 1 Affinity Capture-RNA
CCP1 YKR066C Mitochondrial cytochrome-c peroxidase physical 1 1 1 Affinity Capture-RNA
EMC1 YCL045C Member of conserved endoplasmic reticulum membrane complex physical 1 1 1 Affinity Capture-RNA
POL32 YJR043C Third subunit of DNA polymerase delta physical 1 1 1 Affinity Capture-RNA
POL31 YJR006W Subunit of DNA polymerase delta (polymerase III) physical 1 1 1 Affinity Capture-RNA
RBL2 YOR265W Protein involved in microtubule morphogenesis physical 1 1 1 Affinity Capture-RNA
ESC1 YMR219W Protein involved in telomeric silencing physical 1 1 1 Affinity Capture-RNA
CAD1 YDR423C AP-1-like basic leucine zipper (bZIP) transcriptional activator physical 1 1 1 Affinity Capture-RNA
GSY2 YLR258W Glycogen synthase physical 1 1 1 Affinity Capture-RNA
DSE1 YER124C Daughter cell-specific protein physical 1 1 1 Affinity Capture-RNA
ATC1 YDR184C Nuclear protein physical 1 1 1 Affinity Capture-RNA
HMT1 YBR034C Nuclear SAM-dependent mono- and asymmetric methyltransferase genetic 1 1 1 Positive Genetic
BPT1 YLL015W ABC type transmembrane transporter of MRP/CFTR family physical 1 1 1 Affinity Capture-RNA
CDC19 YAL038W Pyruvate kinase physical 1 1 1 Affinity Capture-RNA
PDR5 YOR153W Plasma membrane ATP-binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
GPR1 YDL035C Plasma membrane G protein coupled receptor (GPCR) physical 1 1 1 Affinity Capture-RNA
NNF2 YGR089W Protein that exhibits physical and genetic interactions with Rpb8p physical 1 1 1 Affinity Capture-RNA
BAT2 YJR148W Cytosolic branched-chain amino acid (BCAA) aminotransferase physical 1 1 1 Affinity Capture-RNA
OSH3 YHR073W Member of an oxysterol-binding protein family physical 1 1 1 Affinity Capture-RNA
AZF1 YOR113W Zinc-finger transcription factor physical 1 1 1 Affinity Capture-RNA
MIX17 YMR002W Mitochondrial intermembrane space protein physical 1 1 1 Affinity Capture-RNA
RPL1A YPL220W Ribosomal 60S subunit protein L1A physical 1 1 1 Affinity Capture-RNA
PBP1 YGR178C Component of glucose deprivation induced stress granules physical 1 1 1 Affinity Capture-RNA
ATP1 YBL099W Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
DFG5 YMR238W Putative mannosidase physical 1 1 1 Affinity Capture-RNA
NIP100 YPL174C Large subunit of the dynactin complex genetic 1 1 1 Negative Genetic
PFY1 YOR122C Profilin physical 1 1 1 Affinity Capture-RNA
MCA1 YOR197W Ca2+-dependent cysteine protease physical 1 1 1 Affinity Capture-RNA
CHS5 YLR330W Component of the exomer complex physical 1 1 1 Affinity Capture-RNA
LRS4 YDR439W Nucleolar protein that forms a complex with Csm1p genetic 1 1 1 Negative Genetic
HMRA1 YCR097W Silenced copy of a1 at HMR physical 1 1 1 Affinity Capture-RNA
CPR7 YJR032W Peptidyl-prolyl cis-trans isomerase (cyclophilin) physical 1 1 1 Affinity Capture-RNA
CPR7 YJR032W Peptidyl-prolyl cis-trans isomerase (cyclophilin) genetic 1 1 1 Negative Genetic
HHT2 YNL031C Histone H3 physical 1 1 1 Affinity Capture-RNA
ASH1 YKL185W Component of the Rpd3L histone deacetylase complex physical 1 1 1 Protein-RNA
COX17 YLL009C Copper metallochaperone that transfers copper to Sco1p and Cox11p physical 1 1 1 Affinity Capture-RNA
ERV29 YGR284C Protein localized to COPII-coated vesicles genetic 1 1 1 Negative Genetic
OXA1 YER154W Mitochondrial inner membrane insertase physical 1 1 1 Protein-RNA
PMT1 YDL095W Protein O-mannosyltransferase of the ER membrane physical 1 1 1 Affinity Capture-RNA
HAC1 YFL031W Basic leucine zipper (bZIP) transcription factor (ATF/CREB1 homolog) physical 1 1 1 Affinity Capture-RNA
NUP188 YML103C Subunit of the inner ring of the nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
MDL1 YLR188W Mitochondrial inner membrane half-type ABC transporter genetic 1 1 1 Negative Genetic
ASN1 YPR145W Asparagine synthetase physical 1 1 1 Affinity Capture-RNA
BET4 YJL031C Alpha subunit of Type II geranylgeranyltransferase physical 1 1 1 Affinity Capture-RNA
RPL11A YPR102C Ribosomal 60S subunit protein L11A physical 1 1 1 Affinity Capture-RNA
ARL3 YPL051W ARF-like small GTPase of the RAS superfamily physical 1 1 1 Affinity Capture-RNA
ARL3 YPL051W ARF-like small GTPase of the RAS superfamily genetic 1 1 1 Negative Genetic
MON2 YNL297C Protein with a role in endocytosis and vacuole integrity genetic 1 1 1 Negative Genetic
AQR1 YNL065W Plasma membrane transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
PUP2 YGR253C Alpha 5 subunit of the 20S proteasome physical 1 1 1 Affinity Capture-RNA
EFT1 YOR133W Elongation factor 2 (EF-2), also encoded by EFT2 physical 1 1 1 Affinity Capture-RNA
LEU1 YGL009C Isopropylmalate isomerase physical 1 1 1 Affinity Capture-RNA
ASG1 YIL130W Zinc cluster protein proposed to be a transcriptional regulator physical 1 1 1 Affinity Capture-RNA
RPS14A YCR031C Protein component of the small (40S) ribosomal subunit genetic 1 1 1 Negative Genetic
RPL7A YGL076C Ribosomal 60S subunit protein L7A physical 1 1 1 Affinity Capture-MS
RPL21A YBR191W Ribosomal 60S subunit protein L21A physical 1 1 1 Affinity Capture-RNA
RPL27B YDR471W Ribosomal 60S subunit protein L27B physical 1 1 1 Affinity Capture-RNA
RPS0A YGR214W Ribosomal 40S subunit protein S0A physical 1 1 1 Affinity Capture-MS
RPS18A YDR450W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-MS
RPS18A YDR450W Protein component of the small (40S) ribosomal subunit genetic 1 1 1 Positive Genetic
ERG5 YMR015C C-22 sterol desaturase physical 1 1 1 Affinity Capture-RNA
ASN2 YGR124W Asparagine synthetase physical 1 1 1 Affinity Capture-RNA
RTN1 YDR233C Reticulon protein physical 1 1 1 Affinity Capture-RNA
AIM44 YPL158C Regulator of Cdc42p and Rho1p genetic 1 1 1 Negative Genetic
ADI1 YMR009W Acireductone dioxygenease involved in methionine salvage pathway physical 1 1 1 Affinity Capture-RNA
SAC7 YDR389W GTPase activating protein (GAP) for Rho1p physical 1 1 1 Affinity Capture-RNA
PXA2 YKL188C Subunit of heterodimeric peroxisomal ABC transport complex, with Pxa1p physical 1 1 1 PCA
REV7 YIL139C Accessory subunit of DNA polymerase zeta physical 1 1 1 Affinity Capture-RNA
HBS1 YKR084C GTPase with similarity to translation release factors physical 1 1 1 Affinity Capture-RNA
BUG1 YDL099W Cis-golgi localized protein involved in ER to Golgi transport physical 1 1 1 Affinity Capture-RNA
FMP27 YLR454W Protein with structural similarity to lipid transport protein Vps13p physical 1 1 1 Affinity Capture-RNA
RPL16B YNL069C Ribosomal 60S subunit protein L16B physical 1 1 1 Affinity Capture-RNA
GLR1 YPL091W Cytosolic and mitochondrial glutathione oxidoreductase physical 1 1 1 Affinity Capture-RNA
POG1 YIL122W DNA-binding transcriptional activator physical 1 1 1 Affinity Capture-RNA
CIT1 YNR001C Mitochondrial citrate synthase physical 1 1 1 Affinity Capture-RNA
EMP70 YLR083C Protein with a role in cellular adhesion and filamentous growth physical 1 1 1 Affinity Capture-RNA
BUD22 YMR014W Protein required for rRNA maturation and ribosomal subunit biogenesis physical 1 1 1 Affinity Capture-RNA
DUS3 YLR401C Dihydrouridine synthase physical 1 1 1 Affinity Capture-RNA
EGT2 YNL327W Glycosylphosphatidylinositol (GPI)-anchored cell wall endoglucanase physical 1 1 1 Affinity Capture-RNA
HEM14 YER014W Protoporphyrinogen oxidase physical 1 1 1 Affinity Capture-RNA
IFH1 YLR223C Coactivator, regulates transcription of ribosomal protein (RP) genes physical 1 1 1 Affinity Capture-RNA
GAT2 YMR136W Protein containing GATA family zinc finger motifs physical 1 1 1 Affinity Capture-RNA
PYK2 YOR347C Pyruvate kinase physical 1 1 1 Affinity Capture-RNA
KRE2 YDR483W Alpha1,2-mannosyltransferase of the Golgi physical 1 1 1 Affinity Capture-RNA
MRH1 YDR033W Protein that localizes primarily to the plasma membrane physical 1 1 1 Affinity Capture-RNA
NCE102 YPR149W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
EHT1 YBR177C Octanoyl-CoA:ethanol acyltransferase genetic 1 1 1 Negative Genetic
GLK1 YCL040W Glucokinase physical 1 1 1 Affinity Capture-RNA
MAP1 YLR244C Methionine aminopeptidase physical 1 1 1 Affinity Capture-RNA
CPR5 YDR304C Peptidyl-prolyl cis-trans isomerase (cyclophilin) of the ER physical 1 1 1 Affinity Capture-RNA
HYR1 YIR037W Glutathione peroxidase physical 1 1 1 Affinity Capture-RNA
NFS1 YCL017C Cysteine desulfurase involved in iron-sulfur cluster biogenesis physical 1 1 1 Affinity Capture-RNA
PBP4 YDL053C Pbp1p binding protein physical 1 1 1 Affinity Capture-RNA
SAT4 YCR008W Ser/Thr protein kinase involved in salt tolerance, nutrient response physical 1 1 1 Affinity Capture-RNA
HRQ1 YDR291W 3'-5' DNA helicase of the conserved RecQ family genetic 1 1 1 Negative Genetic
DSE4 YNR067C Daughter cell-specific secreted protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
HXK1 YFR053C Hexokinase isoenzyme 1 physical 1 1 1 Affinity Capture-RNA
LYS4 YDR234W Homoaconitase physical 1 1 1 Affinity Capture-RNA
FCF2 YLR051C Nucleolar protein involved in the early steps of 35S rRNA processing physical 1 1 1 Affinity Capture-RNA
PAM1 YDR251W Essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
PDC2 YDR081C Transcription factor for thiamine-regulated genes genetic 1 1 1 Positive Genetic
ADE16 YLR028C Enzyme of 'de novo' purine biosynthesis physical 1 1 1 Affinity Capture-RNA
DDR48 YMR173W DNA damage-responsive protein physical 1 1 1 Affinity Capture-RNA
CRS1 YNL247W Cysteinyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
LCB5 YLR260W Minor sphingoid long-chain base kinase physical 1 1 1 Affinity Capture-RNA
PMR1 YGL167C High affinity Ca2+/Mn2+ P-type ATPase physical 1 1 1 Affinity Capture-RNA
PPT1 YGR123C Protein serine/threonine phosphatase physical 1 1 1 Affinity Capture-RNA
NKP2 YLR315W Central kinetochore protein and subunit of the Ctf19 complex genetic 1 1 1 Negative Genetic
RRP15 YPR143W Nucleolar protein physical 1 1 1 Affinity Capture-RNA
MMF1 YIL051C Mitochondrial protein required for transamination of isoleucine physical 1 1 1 Affinity Capture-RNA
ALD6 YPL061W Cytosolic aldehyde dehydrogenase physical 1 1 1 Affinity Capture-RNA
RPP1A YDL081C Ribosomal stalk protein P1 alpha genetic 1 1 1 Negative Genetic
OLE1 YGL055W Delta(9) fatty acid desaturase physical 1 1 1 Affinity Capture-RNA
RPL37A YLR185W Ribosomal 60S subunit protein L37A physical 1 1 1 Affinity Capture-RNA
KIN4 YOR233W Serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
CWP2 YKL096W-A Covalently linked cell wall mannoprotein physical 1 1 1 Affinity Capture-RNA
SBA1 YKL117W Co-chaperone that binds and regulates Hsp90 family chaperones physical 1 1 1 Affinity Capture-RNA
SBA1 YKL117W Co-chaperone that binds and regulates Hsp90 family chaperones genetic 1 1 1 Synthetic Lethality
RIA1 YNL163C Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis physical 1 1 1 Affinity Capture-RNA
RPS25B YLR333C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
NAM2 YLR382C Mitochondrial leucyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
PSP2 YML017W Asn rich cytoplasmic protein that contains RGG motifs physical 1 1 1 Affinity Capture-RNA
ROT1 YMR200W Molecular chaperone involved in protein folding in ER physical 1 1 1 Affinity Capture-RNA
IDP1 YDL066W Mitochondrial NADP-specific isocitrate dehydrogenase physical 1 1 1 Affinity Capture-RNA
CUZ1 YNL155W Protein with a role in the ubiquitin-proteasome pathway physical 1 1 1 Affinity Capture-RNA
DNF1 YER166W Aminophospholipid translocase (flippase) physical 1 1 1 Affinity Capture-RNA
GLN4 YOR168W Glutamine tRNA synthetase physical 1 1 1 Affinity Capture-RNA
NPT1 YOR209C Nicotinate phosphoribosyltransferase physical 1 1 1 Affinity Capture-RNA
GYP7 YDL234C GTPase-activating protein for yeast Rab family members physical 1 1 1 Affinity Capture-RNA
RPL12A YEL054C Ribosomal 60S subunit protein L12A physical 1 1 1 Affinity Capture-RNA
MUB1 YMR100W MYND domain-containing protein physical 1 1 1 Affinity Capture-RNA
NVJ3 YDR179W-A Protein with a potential role in tethering ER and vacuoles genetic 1 1 1 Negative Genetic
RPS9A YPL081W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-MS
MSS18 YPR134W Nuclear encoded protein needed for splicing of mitochondrial intron genetic 1 1 1 Positive Genetic
PSA1 YDL055C GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase) physical 1 1 1 Affinity Capture-RNA
ARO3 YDR035W 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase physical 1 1 1 Affinity Capture-RNA
RPL24A YGL031C Ribosomal 60S subunit protein L24A physical 1 1 1 Affinity Capture-RNA
RPL20A YMR242C Ribosomal 60S subunit protein L20A physical 1 1 1 Affinity Capture-MS
RPS22B YLR367W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-MS
RPL4B YDR012W Ribosomal 60S subunit protein L4B physical 1 1 1 Affinity Capture-MS
RPL17B YJL177W Ribosomal 60S subunit protein L17B physical 1 1 1 Affinity Capture-RNA
RPL19A YBR084C-A Ribosomal 60S subunit protein L19A physical 1 1 1 Affinity Capture-RNA
RPL35A YDL191W Ribosomal 60S subunit protein L35A physical 1 1 1 Affinity Capture-Western
RPL6B YLR448W Ribosomal 60S subunit protein L6B physical 1 1 1 Affinity Capture-RNA
GPI17 YDR434W Transmembrane protein physical 1 1 1 Affinity Capture-RNA
MIL1 YFL034W Predicted lipase physical 1 1 1 Affinity Capture-RNA
RFS1 YBR052C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RPL6A YML073C Ribosomal 60S subunit protein L6A physical 1 1 1 Affinity Capture-RNA
DOS2 YDR068W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
NHA1 YLR138W Na+/H+ antiporter physical 1 1 1 Affinity Capture-RNA
RTT107 YHR154W BRCA1 C-terminal domain protein needed for recovery from DNA damage physical 1 1 1 Affinity Capture-RNA
ARO2 YGL148W Bifunctional chorismate synthase and flavin reductase physical 1 1 1 Affinity Capture-RNA
GUA1 YMR217W GMP synthase physical 1 1 1 Affinity Capture-RNA
HEM1 YDR232W 5-aminolevulinate synthase physical 1 1 1 Affinity Capture-RNA
RPL26A YLR344W Ribosomal 60S subunit protein L26A physical 1 1 1 Affinity Capture-MS
RPL34A YER056C-A Ribosomal 60S subunit protein L34A physical 1 1 1 Affinity Capture-RNA
RPL34B YIL052C Ribosomal 60S subunit protein L34B physical 1 1 1 Affinity Capture-RNA
RPS12 YOR369C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-MS
RPS19A YOL121C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-MS
ABP140 YOR239W AdoMet-dependent tRNA methyltransferase and actin binding protein physical 1 1 1 Affinity Capture-RNA
CMK2 YOL016C Calmodulin-dependent protein kinase physical 1 1 1 Affinity Capture-RNA
DEG1 YFL001W tRNA:pseudouridine synthase physical 1 1 1 Affinity Capture-RNA
FPS1 YLL043W Aquaglyceroporin, plasma membrane channel physical 1 1 1 Affinity Capture-RNA
PCM1 YEL058W Essential N-acetylglucosamine-phosphate mutase physical 1 1 1 Affinity Capture-RNA
PHO90 YJL198W Low-affinity phosphate transporter physical 1 1 1 Affinity Capture-RNA
PDX3 YBR035C Pyridoxine (pyridoxamine) phosphate oxidase physical 1 1 1 Affinity Capture-RNA
PTK2 YJR059W Serine/threonine protein kinase physical 1 1 1 Biochemical Activity
PHO91 YNR013C Low-affinity vacuolar phosphate transporter physical 1 1 1 Affinity Capture-RNA
NVJ2 YPR091C Lipid-binding ER protein, enriched at nucleus-vacuolar junctions (NVJ) physical 1 1 1 Affinity Capture-RNA
EMC4 YGL231C Member of conserved ER transmembrane complex physical 1 1 1 Affinity Capture-RNA
PIK1 YNL267W Phosphatidylinositol 4-kinase physical 1 1 1 Affinity Capture-RNA
RNH70 YGR276C 3'-5' exoribonuclease physical 1 1 1 Affinity Capture-RNA
RUD3 YOR216C Golgi matrix protein physical 1 1 1 Affinity Capture-RNA
CHS7 YHR142W Protein of unknown function genetic 1 1 1 Synthetic Haploinsufficiency
PGA2 YNL149C Essential protein required for maturation of Gas1p and Pho8p genetic 1 1 1 Negative Genetic
ERG24 YNL280C C-14 sterol reductase genetic 1 1 1 Negative Genetic
PRX1 YBL064C Mitochondrial peroxiredoxin with thioredoxin peroxidase activity physical 1 1 1 Affinity Capture-RNA
RPL14A YKL006W Ribosomal 60S subunit protein L14A physical 1 1 1 Affinity Capture-RNA
MNN5 YJL186W Alpha-1,2-mannosyltransferase physical 1 1 1 Affinity Capture-RNA
RKI1 YOR095C Ribose-5-phosphate ketol-isomerase physical 1 1 1 Affinity Capture-RNA
KTR4 YBR199W Glycosyltransferase involved in protein glycosylation physical 1 1 1 Affinity Capture-RNA
DNF2 YDR093W Aminophospholipid translocase (flippase) physical 1 1 1 Affinity Capture-RNA
CDC50 YCR094W Endosomal protein that interacts with phospholipid flippase Drs2p genetic 1 1 1 Negative Genetic
PEX3 YDR329C Peroxisomal membrane protein (PMP) physical 1 1 1 Affinity Capture-RNA
ASP1 YDR321W Cytosolic L-asparaginase, involved in asparagine catabolism physical 1 1 1 Affinity Capture-RNA
RIB3 YDR487C 3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase) physical 1 1 1 Affinity Capture-RNA
PNC1 YGL037C Nicotinamidase that converts nicotinamide to nicotinic acid physical 1 1 1 Affinity Capture-RNA
CHS2 YBR038W Chitin synthase II physical 1 1 1 Affinity Capture-RNA
AIM6 YDL237W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RHO3 YIL118W Non-essential small GTPase of the Rho/Rac family of Ras-like proteins physical 1 1 1 Affinity Capture-RNA
MET7 YOR241W Folylpolyglutamate synthetase physical 1 1 1 Affinity Capture-RNA
NPR1 YNL183C Protein kinase physical 1 1 1 Reconstituted Complex
RPS16B YDL083C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
HXT3 YDR345C Low affinity glucose transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
PHO8 YDR481C Repressible vacuolar alkaline phosphatase physical 1 1 1 Affinity Capture-RNA
COM2 YER130C Transcription factor that binds IME1 Upstream Activation Signal (UAS) physical 1 1 1 Affinity Capture-RNA
ERG4 YGL012W C-24(28) sterol reductase physical 1 1 1 Affinity Capture-RNA
SAD1 YFR005C Conserved zinc-finger domain protein involved in pre-mRNA splicing genetic 1 1 1 Negative Genetic
CIS3 YJL158C Mannose-containing glycoprotein constituent of the cell wall physical 1 1 1 Affinity Capture-RNA
PMC1 YGL006W Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions physical 1 1 1 Affinity Capture-RNA
ITR1 YDR497C Myo-inositol transporter physical 1 1 1 Affinity Capture-RNA
BAP2 YBR068C High-affinity leucine permease physical 1 1 1 Affinity Capture-RNA
ILM1 YJR118C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RTC1 YOL138C Subunit of SEACAT, a subcomplex of the SEA complex genetic 1 1 1 Negative Genetic
DPP1 YDR284C Diacylglycerol pyrophosphate (DGPP) phosphatase physical 1 1 1 Affinity Capture-RNA
RRT14 YIL127C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
CHO2 YGR157W Phosphatidylethanolamine methyltransferase (PEMT) physical 1 1 1 Affinity Capture-RNA
EFR3 YMR212C Protein required for Stt4-containing PI kinase complex localization physical 1 1 1 Affinity Capture-RNA
ERG3 YLR056W C-5 sterol desaturase physical 1 1 1 Affinity Capture-RNA
CCW12 YLR110C Cell wall mannoprotein physical 1 1 1 Affinity Capture-RNA
MRN1 YPL184C RNA-binding protein that may be involved in translational regulation physical 1 1 1 Affinity Capture-RNA
HPT1 YDR399W Dimeric hypoxanthine-guanine phosphoribosyltransferase physical 1 1 1 Affinity Capture-RNA
RMR1 YGL250W Protein required for meiotic recombination and gene conversion genetic 1 1 1 Negative Genetic
BRR6 YGL247W Essential nuclear envelope integral membrane protein genetic 1 1 1 Negative Genetic
RPL39 YJL189W Ribosomal 60S subunit protein L39 physical 1 1 1 Affinity Capture-RNA
DSE2 YHR143W Daughter cell-specific secreted protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
CTS1 YLR286C Endochitinase physical 1 1 1 Affinity Capture-RNA
SAM50 YNL026W Component of the Sorting and Assembly Machinery (SAM) complex physical 1 1 1 Affinity Capture-MS
NCW1 YMR122W-A Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PIR1 YKL164C O-glycosylated protein required for cell wall stability physical 1 1 1 Affinity Capture-RNA
RQC2 YPL009C Component of the Ribosome Quality Control (RQC) complex physical 1 1 1 Affinity Capture-RNA
GLO1 YML004C Monomeric glyoxalase I physical 1 1 1 Affinity Capture-RNA
MIC60 YKR016W Component of the MICOS complex physical 1 1 1 Affinity Capture-RNA
RPO41 YFL036W Mitochondrial RNA polymerase physical 1 1 1 Affinity Capture-RNA
HIS1 YER055C ATP phosphoribosyltransferase physical 1 1 1 Affinity Capture-RNA
ERG9 YHR190W Farnesyl-diphosphate farnesyl transferase (squalene synthase) physical 1 1 1 Affinity Capture-RNA
RPL33A YPL143W Ribosomal 60S subunit protein L33A physical 1 1 1 Affinity Capture-RNA
MYG1 YER156C Protein involved in mitochondrial function physical 1 1 1 Proximity Label-MS
RPL12B YDR418W Ribosomal 60S subunit protein L12B physical 1 1 1 Affinity Capture-RNA
RPS6B YBR181C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
PRD1 YCL057W Zinc metalloendopeptidase physical 1 1 1 Affinity Capture-RNA
JLP2 YMR132C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MSC1 YML128C Protein of unknown function genetic 1 1 1 Positive Genetic
MPC2 YHR162W Highly conserved subunit of the mitochondrial pyruvate carrier (MPC) physical 1 1 1 Affinity Capture-RNA
MDL2 YPL270W Mitochondrial inner membrane half-type ABC transporter physical 1 1 1 Affinity Capture-RNA
CYT2 YKL087C Cytochrome c1 heme lyase physical 1 1 1 Affinity Capture-RNA
EFM4 YIL064W Lysine methyltransferase physical 1 1 1 Affinity Capture-RNA
IMP2 YMR035W Catalytic subunit of mitochondrial inner membrane peptidase complex genetic 1 1 1 Negative Genetic
HEM3 YDL205C Porphobilinogen deaminase physical 1 1 1 Affinity Capture-RNA
MCD4 YKL165C Protein involved in GPI anchor synthesis physical 1 1 1 Affinity Capture-RNA
DIT2 YDR402C N-formyltyrosine oxidase genetic 1 1 1 Negative Genetic
CHM7 YJL049W Yeast homolog of human CHMP7, localizes to the endoplasmic reticulum physical 1 1 1 Affinity Capture-RNA
CUP1-2 YHR055C Metallothionein physical 1 1 1 Affinity Capture-RNA
RPL24B YGR148C Ribosomal 60S subunit protein L24B physical 1 1 1 Affinity Capture-RNA
NMA111 YNL123W Serine protease and general molecular chaperone physical 1 1 1 Affinity Capture-RNA
RPL21B YPL079W Ribosomal 60S subunit protein L21B physical 1 1 1 Affinity Capture-RNA
PMP3 YDR276C Small plasma membrane protein physical 1 1 1 Affinity Capture-RNA
PMP1 YCR024C-A Regulatory subunit for the plasma membrane H(+)-ATPase Pma1p physical 1 1 1 Affinity Capture-RNA
MNN1 YER001W Alpha-1,3-mannosyltransferase physical 1 1 1 Affinity Capture-RNA
ROT2 YBR229C Glucosidase II catalytic subunit physical 1 1 1 Affinity Capture-RNA
PMP2 YEL017C-A Proteolipid associated with plasma membrane H(+)-ATPase (Pma1p) physical 1 1 1 Affinity Capture-RNA
RCF1 YML030W Cytochrome c oxidase subunit genetic 1 1 1 Negative Genetic
CUP1-1 YHR053C Metallothionein physical 1 1 1 Affinity Capture-RNA
REE1 YJL217W Cytoplasmic protein involved in the regulation of enolase (ENO1) physical 1 1 1 Affinity Capture-RNA
PAN6 YIL145C Pantothenate synthase genetic 1 1 1 Negative Genetic
RKR1 YMR247C RING domain E3 ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
PHO3 YBR092C Constitutively expressed acid phosphatase similar to Pho5p physical 1 1 1 Affinity Capture-RNA
RSM28 YDR494W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
FDC1 YDR539W Ferulic acid decarboxylase physical 1 1 1 Affinity Capture-RNA
AIM9 YER080W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ECM14 YHR132C Conserved fungal protein with similarity to zinc carboxypeptidases physical 1 1 1 Affinity Capture-RNA
LST4 YKL176C Subunit of the Lst4p-Lst7p GTPase activating protein complex for Gtr2p physical 1 1 1 Affinity Capture-RNA
ECM38 YLR299W Gamma-glutamyltranspeptidase physical 1 1 1 Affinity Capture-RNA