Standard name Systematic name Name description Description
CCR4 YAL021C Component of the CCR4-NOT transcriptional complex Component of the CCR4-NOT transcriptional complex; CCR4-NOT is involved in regulation of gene expression; component of the major cytoplasmic deadenylase, which is involved in mRNA poly(A) tail shortening
Visualize the interactome of CCR4
Links to external databases:
  SGD   |   KEGG   |  

Cell cycle phase and timing of transcription peak

Cell cycle phase Time (min)

CYCLoPs localization & abundance

WT1 WT2 WT3
Cytoplasm 0.941 0.939 0.984

GFP localization & abundance

GFP localization GFP abundance
cytoplasm 2780

GO term count

Metabolism Cell cycle Cell division Signal transduction DNA replication
CCR4 16 1 0 2 5

Enzyme information

Catalyzed reactions in Yeast8

List of interactors

Use the search utility to find the interactor you are looking for. By clicking the column headers the table will be sorted on that column. Use shift+click to sort on multiple columns. Default sorting is on number of experiments, number of unique methods and the number of publications, and alphabetical on standard name, in that order.
Standard name Systematic name Name description Type #Experiments #Methods #Publications Evidence
POP2 YNR052C Subunit of Ccr4-Not complex that mediates 3' to 5' mRNA deadenylation physical 30 7 20 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Two-hybrid, Two-hybrid, Two-hybrid, Two-hybrid, Two-hybrid, Affinity Capture-Western, Affinity Capture-Western, Two-hybrid, Affinity Capture-Western, Affinity Capture-Western, Co-purification, Co-purification, Co-fractionation, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Two-hybrid, Affinity Capture-MS, Reconstituted Complex, Two-hybrid, Affinity Capture-MS, Affinity Capture-RNA
CDC39 YCR093W Subunit of the CCR4-NOT1 core complex physical 21 5 15 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Two-hybrid, Co-purification, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Co-purification, Affinity Capture-Western, Two-hybrid, Affinity Capture-MS, Affinity Capture-RNA, Co-purification
CAF40 YNL288W Component of the CCR4-NOT transcriptional complex physical 14 4 11 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, PCA, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-RNA, Affinity Capture-Western
MOT2 YER068W Ubiquitin-protein ligase subunit of the CCR4-NOT complex physical 12 5 11 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, PCA, Affinity Capture-Western, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-RNA, Co-purification, Affinity Capture-MS
CDC36 YDL165W Component of the CCR4-NOT core complex, involved in mRNA decapping physical 6 2 5 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-Western
PAN2 YGL094C Catalytic subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex genetic 6 2 5 Synthetic Growth Defect, Synthetic Growth Defect, Synthetic Growth Defect, Synthetic Growth Defect, Phenotypic Enhancement, Synthetic Growth Defect
CAF130 YGR134W Subunit of the CCR4-NOT transcriptional regulatory complex physical 6 2 5 Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western
DBF2 YGR092W Ser/Thr kinase involved in transcription and stress response physical 6 4 4 Affinity Capture-Western, Two-hybrid, Two-hybrid, Two-hybrid, Co-purification, Affinity Capture-RNA
HEK2 YBL032W RNA binding protein involved in asymmetric localization of ASH1 mRNA genetic 6 3 3 Synthetic Growth Defect, Synthetic Growth Defect, Synthetic Lethality, Synthetic Growth Defect, Synthetic Growth Defect, Phenotypic Enhancement
NOT5 YPR072W Component of the CCR4-NOT core complex, involved in mRNA decapping physical 5 4 5 Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, PCA, Affinity Capture-RNA
DHH1 YDL160C Cytoplasmic DEAD-box helicase and mRNA decapping activator genetic 5 4 4 Dosage Lethality, Dosage Rescue, Synthetic Growth Defect, Dosage Rescue, Synthetic Lethality
MPT5 YGL178W mRNA-binding protein of the PUF family genetic 5 3 4 Synthetic Lethality, Dosage Rescue, Synthetic Growth Defect, Synthetic Growth Defect, Synthetic Growth Defect
BTT1 YDR252W Heterotrimeric nascent polypeptide-associated complex beta3 subunit physical 5 4 3 Affinity Capture-MS, Affinity Capture-Western, Affinity Capture-Western, Co-fractionation, Affinity Capture-RNA
DUN1 YDL101C Cell-cycle checkpoint S/T protein kinase genetic 5 2 3 Phenotypic Enhancement, Synthetic Growth Defect, Phenotypic Enhancement, Synthetic Growth Defect, Synthetic Growth Defect
LRG1 YDL240W GTPase-activating protein (GAP) genetic 4 3 4 Dosage Rescue, Synthetic Rescue, Dosage Growth Defect, Synthetic Rescue
VPS30 YPL120W Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II genetic 4 2 4 Negative Genetic, Synthetic Growth Defect, Negative Genetic, Negative Genetic
NOT3 YIL038C Component of the CCR4-NOT core complex, involved in mRNA decapping physical 4 3 3 Affinity Capture-Western, Affinity Capture-Western, PCA, Affinity Capture-RNA
RAD52 YML032C Protein involved in homologous recombination genetic 4 3 3 Synthetic Rescue, Synthetic Growth Defect, Synthetic Lethality, Synthetic Lethality
CDC39 YCR093W Subunit of the CCR4-NOT1 core complex genetic 4 2 3 Synthetic Lethality, Synthetic Lethality, Synthetic Lethality, Synthetic Rescue
PBP1 YGR178C Component of glucose deprivation induced stress granules genetic 4 2 3 Synthetic Rescue, Synthetic Rescue, Synthetic Rescue, Dosage Lethality
ROM2 YLR371W Guanine nucleotide exchange factor (GEF) for Rho1p and Rho2p genetic 4 2 2 Dosage Rescue, Synthetic Lethality, Synthetic Lethality, Dosage Rescue
LSM1 YJL124C Lsm (Like Sm) protein genetic 3 3 3 Dosage Lethality, Negative Genetic, Synthetic Lethality
POP2 YNR052C Subunit of Ccr4-Not complex that mediates 3' to 5' mRNA deadenylation genetic 3 2 3 Dosage Rescue, Dosage Rescue, Synthetic Growth Defect
CDC73 YLR418C Component of the Paf1p complex genetic 3 2 3 Synthetic Lethality, Synthetic Lethality, Negative Genetic
PUF4 YGL014W Member of the PUF protein family physical 3 2 3 Affinity Capture-Western, Affinity Capture-RNA, Affinity Capture-RNA
TEL1 YBL088C Protein kinase primarily involved in telomere length regulation genetic 3 2 3 Synthetic Growth Defect, Synthetic Growth Defect, Negative Genetic
SWI4 YER111C DNA binding component of the SBF complex (Swi4p-Swi6p) genetic 3 2 3 Phenotypic Suppression, Phenotypic Suppression, Synthetic Lethality
ELG1 YOR144C Subunit of an alternative replication factor C complex genetic 3 2 3 Synthetic Growth Defect, Synthetic Growth Defect, Phenotypic Suppression
TOP1 YOL006C Topoisomerase I genetic 3 2 3 Negative Genetic, Synthetic Growth Defect, Negative Genetic
SWC5 YBR231C Component of the SWR1 complex genetic 3 2 3 Negative Genetic, Synthetic Growth Defect, Synthetic Growth Defect
GCS1 YDL226C ADP-ribosylation factor GTPase activating protein (ARF GAP) genetic 3 2 3 Negative Genetic, Synthetic Growth Defect, Negative Genetic
NOT5 YPR072W Component of the CCR4-NOT core complex, involved in mRNA decapping genetic 3 1 3 Synthetic Lethality, Synthetic Lethality, Synthetic Lethality
SPT10 YJL127C Histone H3 acetylase with a role in transcriptional regulation genetic 3 1 3 Synthetic Rescue, Synthetic Rescue, Synthetic Rescue
SPT6 YGR116W Nucleosome remodeling protein genetic 3 1 3 Synthetic Rescue, Synthetic Rescue, Synthetic Rescue
SSN2 YDR443C Subunit of the RNA polymerase II mediator complex physical 3 3 2 Affinity Capture-Western, Two-hybrid, Affinity Capture-RNA
RAD51 YER095W Strand exchange protein genetic 3 3 2 Synthetic Lethality, Synthetic Growth Defect, Phenotypic Enhancement
RAD54 YGL163C DNA-dependent ATPase that stimulates strand exchange genetic 3 3 2 Synthetic Growth Defect, Synthetic Lethality, Negative Genetic
SPT15 YER148W TATA-binding protein (TBP) genetic 3 3 2 Synthetic Lethality, Dosage Rescue, Synthetic Rescue
SSD1 YDR293C Translational repressor genetic 3 3 2 Dosage Rescue, Synthetic Lethality, Synthetic Growth Defect
HMT1 YBR034C Nuclear SAM-dependent mono- and asymmetric methyltransferase physical 3 2 2 Affinity Capture-Western, Affinity Capture-Western, Affinity Capture-RNA
SGS1 YMR190C RecQ family nucleolar DNA helicase genetic 3 2 2 Synthetic Growth Defect, Synthetic Growth Defect, Negative Genetic
SRS2 YJL092W DNA helicase and DNA-dependent ATPase genetic 3 2 2 Synthetic Growth Defect, Dosage Lethality, Dosage Lethality
ULP2 YIL031W Peptidase that deconjugates Smt3/SUMO-1 peptides from proteins genetic 3 2 2 Phenotypic Suppression, Dosage Rescue, Dosage Rescue
SWC4 YGR002C Component of the Swr1p complex that incorporates Htz1p into chromatin genetic 3 2 2 Synthetic Lethality, Synthetic Lethality, Negative Genetic
RAD27 YKL113C 5' to 3' exonuclease, 5' flap endonuclease genetic 3 1 2 Synthetic Growth Defect, Synthetic Growth Defect, Synthetic Growth Defect
CCR4 YAL021C Component of the CCR4-NOT transcriptional complex physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
UBR1 YGR184C E3 ubiquitin ligase (N-recognin) physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
TAF4 YMR005W TFIID subunit (48 kDa) physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
SSN3 YPL042C Component of the RNA polymerase II mediator complex physical 2 2 2 Affinity Capture-Western, Affinity Capture-RNA
HPR1 YDR138W Subunit of THO/TREX complexes physical 2 2 2 Affinity Capture-Western, Affinity Capture-RNA
PAF1 YBR279W Component of the Paf1p complex involved in transcription elongation physical 2 2 2 Affinity Capture-Western, Affinity Capture-RNA
TFG2 YGR005C TFIIF (Transcription Factor II) middle subunit physical 2 2 2 Affinity Capture-Western, Affinity Capture-RNA
TAF13 YML098W TFIID subunit (19 kDa) physical 2 2 2 Two-hybrid, Affinity Capture-RNA
MPT5 YGL178W mRNA-binding protein of the PUF family physical 2 2 2 Affinity Capture-Western, Affinity Capture-RNA
SGT1 YOR057W Cochaperone protein physical 2 2 2 PCA, Affinity Capture-RNA
RAP1 YNL216W Essential DNA-binding transcription regulator that binds many loci physical 2 2 2 Reconstituted Complex, Affinity Capture-RNA
MDV1 YJL112W Peripheral protein of cytosolic face of mitochondrial outer membrane physical 2 2 2 Two-hybrid, Affinity Capture-RNA
EPO1 YMR124W Protein involved in septin-ER tethering physical 2 2 2 Two-hybrid, Affinity Capture-RNA
YMR181C YMR181C Protein of unknown function physical 2 2 2 Two-hybrid, Affinity Capture-RNA
NAB2 YGL122C Nuclear polyadenylated RNA-binding protein physical 2 2 2 Affinity Capture-RNA, Affinity Capture-Western
PUF3 YLL013C Protein of the mitochondrial outer surface physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
SMY2 YBR172C GYF domain protein physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
DSN1 YIR010W Essential component of the outer kinetochore MIND complex physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
SSN8 YNL025C Cyclin-like component of RNA polymerase II holoenzyme physical 2 2 2 Two-hybrid, Affinity Capture-RNA
MTQ2 YDR140W S-adenosylmethionine-dependent methyltransferase physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
RPD3 YNL330C Histone deacetylase, component of both the Rpd3S and Rpd3L complexes genetic 2 2 2 Synthetic Growth Defect, Negative Genetic
SLT2 YHR030C Serine/threonine MAP kinase genetic 2 2 2 Dosage Growth Defect, Phenotypic Suppression
SIN3 YOL004W Component of both the Rpd3S and Rpd3L histone deacetylase complexes genetic 2 2 2 Synthetic Growth Defect, Negative Genetic
ESP1 YGR098C Separase/separin, a caspase-like cysteine protease genetic 2 2 2 Negative Genetic, Synthetic Growth Defect
VPS4 YPR173C AAA-ATPase involved in multivesicular body (MVB) protein sorting genetic 2 2 2 Synthetic Growth Defect, Synthetic Lethality
DST1 YGL043W General transcription elongation factor TFIIS genetic 2 2 2 Synthetic Lethality, Synthetic Growth Defect
SPT3 YDR392W Subunit of the SAGA and SAGA-like transcriptional regulatory complexes genetic 2 2 2 Synthetic Lethality, Synthetic Rescue
MRC1 YCL061C S-phase checkpoint protein required for DNA replication genetic 2 2 2 Phenotypic Enhancement, Synthetic Growth Defect
VPS72 YDR485C Htz1p-binding component of the SWR1 complex genetic 2 2 2 Synthetic Rescue, Synthetic Growth Defect
SWI6 YLR182W Transcription cofactor genetic 2 2 2 Synthetic Lethality, Synthetic Growth Defect
CDC28 YBR160W Cyclin-dependent kinase (CDK) catalytic subunit genetic 2 2 2 Synthetic Growth Defect, Negative Genetic
LSM4 YER112W Lsm (Like Sm) protein genetic 2 2 2 Synthetic Rescue, Phenotypic Suppression
EDC3 YEL015W Non-essential conserved protein with a role in mRNA decapping genetic 2 2 2 Synthetic Rescue, Phenotypic Suppression
ATG9 YDL149W Transmembrane protein involved in forming Cvt and autophagic vesicles physical 2 2 2 Affinity Capture-MS, Affinity Capture-RNA
ARF1 YDL192W ADP-ribosylation factor genetic 2 2 2 Negative Genetic, Synthetic Growth Defect
CAF4 YKR036C WD40 repeat-containing protein associated with the CCR4-NOT complex physical 2 2 2 Two-hybrid, Affinity Capture-RNA
BIM1 YER016W Microtubule plus end-tracking protein genetic 2 2 2 Synthetic Growth Defect, Synthetic Lethality
CAF16 YFL028C Part of evolutionarily-conserved CCR4-NOT regulatory complex physical 2 2 2 Two-hybrid, Affinity Capture-RNA
APJ1 YNL077W Hsp40 chaperone with a role in SUMO-mediated protein degradation physical 2 2 2 Affinity Capture-RNA, Affinity Capture-MS
MOT2 YER068W Ubiquitin-protein ligase subunit of the CCR4-NOT complex genetic 2 1 2 Synthetic Lethality, Synthetic Lethality
PAF1 YBR279W Component of the Paf1p complex involved in transcription elongation genetic 2 1 2 Synthetic Lethality, Synthetic Lethality
PUF2 YPR042C PUF family mRNA-binding protein physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
PMP1 YCR024C-A Regulatory subunit for the plasma membrane H(+)-ATPase Pma1p physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
GPD1 YDL022W NAD-dependent glycerol-3-phosphate dehydrogenase physical 2 1 2 Affinity Capture-RNA, Affinity Capture-RNA
VPS38 YLR360W Part of a Vps34p phosphatidylinositol 3-kinase complex genetic 2 1 2 Negative Genetic, Negative Genetic
SWR1 YDR334W Swi2/Snf2-related ATPase genetic 2 1 2 Synthetic Growth Defect, Synthetic Growth Defect
PKC1 YBL105C Protein serine/threonine kinase genetic 2 1 2 Dosage Rescue, Dosage Rescue
SNC2 YOR327C Vesicle membrane receptor protein (v-SNARE) genetic 2 1 2 Positive Genetic, Positive Genetic
ROM1 YGR070W Guanine nucleotide exchange factor (GEF) for Rho1p genetic 2 1 2 Synthetic Growth Defect, Synthetic Growth Defect
STM1 YLR150W Protein required for optimal translation under nutrient stress genetic 2 1 2 Dosage Rescue, Dosage Rescue
DIA1 YMR316W Protein of unknown function genetic 2 1 2 Positive Genetic, Positive Genetic
SWM2 YNR004W Protein with a role in snRNA and snoRNA cap trimethylation genetic 2 1 2 Negative Genetic, Negative Genetic
IGO1 YNL157W Protein required for initiation of G0 program genetic 2 1 2 Phenotypic Suppression, Phenotypic Suppression
IGO2 YHR132W-A Protein required for initiation of G0 program genetic 2 1 2 Phenotypic Suppression, Phenotypic Suppression
APL5 YPL195W Delta adaptin-like subunit of the clathrin associated protein complex genetic 2 1 2 Negative Genetic, Negative Genetic
ARP6 YLR085C Actin-related protein that binds nucleosomes genetic 2 1 2 Synthetic Growth Defect, Synthetic Growth Defect
APS3 YJL024C Small subunit of the clathrin-associated adaptor complex AP-3 genetic 2 1 2 Negative Genetic, Negative Genetic
CLN2 YPL256C G1 cyclin involved in regulation of the cell cycle genetic 2 2 1 Synthetic Lethality, Phenotypic Suppression
NHP6A YPR052C High-mobility group (HMG) protein genetic 2 2 1 Synthetic Lethality, Dosage Rescue
MMS22 YLR320W Subunit of E3 ubiquitin ligase complex involved in replication repair genetic 2 2 1 Synthetic Lethality, Synthetic Growth Defect
MMS1 YPR164W Subunit of E3 ubiquitin ligase complex involved in replication repair genetic 2 2 1 Synthetic Lethality, Synthetic Growth Defect
WHI5 YOR083W Repressor of G1 transcription genetic 2 2 1 Dosage Growth Defect, Synthetic Rescue
CLN1 YMR199W G1 cyclin involved in regulation of the cell cycle genetic 2 2 1 Synthetic Lethality, Phenotypic Suppression
SLX5 YDL013W Subunit of the Slx5-Slx8 SUMO-targeted Ub ligase (STUbL) complex genetic 2 2 1 Synthetic Lethality, Synthetic Growth Defect
NSE4 YDL105W Component of the SMC5-SMC6 complex genetic 2 2 1 Positive Genetic, Negative Genetic
CSM1 YCR086W Nucleolar protein that mediates homolog segregation during meiosis I genetic 2 2 1 Synthetic Lethality, Synthetic Growth Defect
LRS4 YDR439W Nucleolar protein that forms a complex with Csm1p genetic 2 2 1 Synthetic Growth Defect, Synthetic Lethality
NPL3 YDR432W RNA-binding protein genetic 2 2 1 Synthetic Rescue, Synthetic Growth Defect
RPA12 YJR063W RNA polymerase I subunit A12.2 genetic 2 2 1 Synthetic Growth Defect, Synthetic Rescue
ASF1 YJL115W Nucleosome assembly factor genetic 2 2 1 Synthetic Lethality, Synthetic Growth Defect
BRE1 YDL074C E3 ubiquitin ligase genetic 2 1 1 Synthetic Growth Defect, Synthetic Growth Defect
RPT6 YGL048C ATPase of the 19S regulatory particle of the 26S proteasome physical 2 1 1 Affinity Capture-Western, Affinity Capture-Western
SLX8 YER116C Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex genetic 2 1 1 Synthetic Growth Defect, Synthetic Growth Defect
ESA1 YOR244W Catalytic subunit of the histone acetyltransferase complex (NuA4) genetic 2 1 1 Synthetic Growth Defect, Synthetic Growth Defect
CTF18 YMR078C Subunit of a complex with Ctf8p genetic 2 1 1 Synthetic Growth Defect, Synthetic Growth Defect
RAD55 YDR076W Protein that stimulates strand exchange genetic 2 1 1 Synthetic Growth Defect, Synthetic Growth Defect
XRS2 YDR369C FHA domain-containing component of the Mre11 complex genetic 2 1 1 Synthetic Lethality, Synthetic Lethality
MRE11 YMR224C Nuclease subunit of the MRX complex with Rad50p and Xrs2p genetic 2 1 1 Synthetic Lethality, Synthetic Lethality
LGE1 YPL055C Protein involved in histone H2B ubiquitination genetic 2 1 1 Synthetic Growth Defect, Synthetic Growth Defect
YNG2 YHR090C Subunit of NuA4, an essential histone acetyltransferase complex genetic 2 1 1 Synthetic Lethality, Synthetic Lethality
RAD18 YCR066W E3 ubiquitin ligase genetic 2 1 1 Synthetic Growth Defect, Synthetic Growth Defect
RPA190 YOR341W RNA polymerase I largest subunit A190 physical 2 1 1 Affinity Capture-Western, Affinity Capture-Western
DBP5 YOR046C Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family genetic 2 1 1 Synthetic Lethality, Synthetic Lethality
SAE2 YGL175C Endonuclease required for telomere elongation genetic 2 1 1 Synthetic Growth Defect, Synthetic Growth Defect
DCC1 YCL016C Subunit of a complex with Ctf8p and Ctf18p genetic 2 1 1 Synthetic Growth Defect, Synthetic Growth Defect
CTF4 YPR135W Chromatin-associated protein genetic 2 1 1 Synthetic Growth Defect, Synthetic Growth Defect
NPT1 YOR209C Nicotinate phosphoribosyltransferase genetic 2 1 1 Synthetic Growth Defect, Synthetic Growth Defect
RTT101 YJL047C Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex genetic 2 1 1 Synthetic Growth Defect, Synthetic Growth Defect
RTT107 YHR154W BRCA1 C-terminal domain protein needed for recovery from DNA damage genetic 2 1 1 Synthetic Growth Defect, Synthetic Growth Defect
NAT1 YDL040C Subunit of protein N-terminal acetyltransferase NatA genetic 2 1 1 Synthetic Lethality, Synthetic Lethality
RAD50 YNL250W Subunit of MRX complex with Mre11p and Xrs2p genetic 2 1 1 Synthetic Lethality, Synthetic Lethality
ARD1 YHR013C Subunit of protein N-terminal acetyltransferase NatA genetic 2 1 1 Synthetic Lethality, Synthetic Lethality
FKH1 YIL131C Forkhead family transcription factor regulation 1 1 1 chromatin immunoprecipitation-chip evidence
SFP1 YLR403W Regulates transcription of ribosomal protein and biogenesis genes regulation 1 1 1 DNA to cDNA expression microarray evidence
GCN5 YGR252W Catalytic subunit of ADA and SAGA histone acetyltransferase complexes regulation 1 1 1 chromatin immunoprecipitation-chip evidence
IXR1 YKL032C Transcriptional repressor that regulates hypoxic genes during normoxia regulation 1 1 1 DNA to cDNA expression microarray evidence
MED2 YDL005C Subunit of the RNA polymerase II mediator complex regulation 1 1 1 chromatin immunoprecipitation-chip evidence
XBP1 YIL101C Transcriptional repressor regulation 1 1 1 chromatin immunoprecipitation-chip evidence
YAP6 YDR259C Basic leucine zipper (bZIP) transcription factor regulation 1 1 1 chromatin immunoprecipitation-chip evidence
YAP1 YML007W Basic leucine zipper (bZIP) transcription factor regulation 1 1 1 chromatin immunoprecipitation-chip evidence
MED4 YOR174W Subunit of the RNA polymerase II mediator complex regulation 1 1 1 chromatin immunoprecipitation-chip evidence
LEU3 YLR451W Zinc-knuckle transcription factor, repressor and activator regulation 1 1 1 chromatin immunoprecipitation-chip evidence
CIP1 YPL014W Cyclin-dependent kinase inhibitor regulation 1 1 1 co-immunoprecipitation evidence
AME1 YBR211C Essential kinetochore protein associated with microtubules and SPBs physical 1 1 1 Affinity Capture-RNA
AIM25 YJR100C Mitochondria protein of unknown function physical 1 1 1 Affinity Capture-RNA
BFR2 YDR299W Component of the SSU and 90S preribosomes physical 1 1 1 Affinity Capture-RNA
CAB3 YKL088W Subunit of PPCDC and CoA-SPC complexes involved in CoA biosynthesis physical 1 1 1 Affinity Capture-RNA
AMN1 YBR158W Modulator of cell separation and mitotic exit physical 1 1 1 Affinity Capture-RNA
BRR2 YER172C RNA-dependent ATPase RNA helicase (DEIH box) physical 1 1 1 Affinity Capture-RNA
BRE1 YDL074C E3 ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
ALB1 YJL122W Shuttling pre-60S factor physical 1 1 1 Affinity Capture-RNA
AIR2 YDL175C RNA-binding subunit of the TRAMP nuclear RNA surveillance complex physical 1 1 1 Affinity Capture-RNA
ARP7 YPR034W Component of both the SWI/SNF and RSC chromatin remodeling complexes physical 1 1 1 Affinity Capture-RNA
ACT1 YFL039C Actin, structural protein in cytoskeleton genetic 1 1 1 Synthetic Haploinsufficiency
AAR2 YBL074C Component of the U5 snRNP complex genetic 1 1 1 Negative Genetic
CCT6 YDR188W Subunit of the cytosolic chaperonin Cct ring complex physical 1 1 1 Affinity Capture-MS
CCT6 YDR188W Subunit of the cytosolic chaperonin Cct ring complex genetic 1 1 1 Negative Genetic
GCN1 YGL195W Positive regulator of the Gcn2p kinase activity physical 1 1 1 Affinity Capture-MS
PIL1 YGR086C Eisosome core component physical 1 1 1 Affinity Capture-MS
CDC36 YDL165W Component of the CCR4-NOT core complex, involved in mRNA decapping genetic 1 1 1 Synthetic Lethality
RVB1 YDR190C ATP-dependent DNA helicase, also known as pontin physical 1 1 1 Affinity Capture-MS
CYS4 YGR155W Cystathionine beta-synthase physical 1 1 1 Affinity Capture-MS
STI1 YOR027W Evolutionarily-conserved Hsp90 cochaperone physical 1 1 1 Affinity Capture-MS
RNQ1 YCL028W [PIN(+)] prion physical 1 1 1 Affinity Capture-MS
TAF4 YMR005W TFIID subunit (48 kDa) genetic 1 1 1 Negative Genetic
NOT3 YIL038C Component of the CCR4-NOT core complex, involved in mRNA decapping genetic 1 1 1 Synthetic Rescue
CDC73 YLR418C Component of the Paf1p complex physical 1 1 1 Affinity Capture-Western
HPR1 YDR138W Subunit of THO/TREX complexes genetic 1 1 1 Synthetic Lethality
GLC7 YER133W Type 1 S/T protein phosphatase (PP1) catalytic subunit physical 1 1 1 Affinity Capture-MS
EGD1 YPL037C Subunit beta1 of the nascent polypeptide-associated complex (NAC) physical 1 1 1 Two-hybrid
PAB1 YER165W Poly(A) binding protein physical 1 1 1 Biochemical Activity
PAB1 YER165W Poly(A) binding protein genetic 1 1 1 Synthetic Lethality
LSM3 YLR438C-A Lsm (Like Sm) protein physical 1 1 1 PCA
HEK2 YBL032W RNA binding protein involved in asymmetric localization of ASH1 mRNA physical 1 1 1 Affinity Capture-RNA
RPO21 YDL140C RNA polymerase II largest subunit B220 physical 1 1 1 Affinity Capture-Western
RPO21 YDL140C RNA polymerase II largest subunit B220 genetic 1 1 1 Synthetic Lethality
HRP1 YOL123W Subunit of cleavage factor I physical 1 1 1 Affinity Capture-Western
SSB2 YNL209W Cytoplasmic ATPase that is a ribosome-associated molecular chaperone physical 1 1 1 Co-purification
RPB3 YIL021W RNA polymerase II third largest subunit B44 physical 1 1 1 Affinity Capture-MS
TMA108 YIL137C Ribosome-associated, nascent chain binding factor physical 1 1 1 Affinity Capture-MS
RPL16A YIL133C Ribosomal 60S subunit protein L16A physical 1 1 1 Affinity Capture-MS
TMA46 YOR091W Protein of unknown function that associates with translating ribosomes physical 1 1 1 Affinity Capture-MS
YBL005W-B YBL005W-B Retrotransposon TYA Gag and TYB Pol genes physical 1 1 1 Affinity Capture-RNA
YBR090C YBR090C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
HAC1 YFL031W Basic leucine zipper (bZIP) transcription factor (ATF/CREB1 homolog) physical 1 1 1 Affinity Capture-RNA
RPL22B YFL034C-A Ribosomal 60S subunit protein L22A physical 1 1 1 Affinity Capture-RNA
REC107 YJR021C Protein involved in early stages of meiotic recombination physical 1 1 1 Affinity Capture-RNA
HRB1 YNL004W Poly(A+) RNA-binding protein physical 1 1 1 Affinity Capture-RNA
FKH2 YNL068C Forkhead family transcription factor physical 1 1 1 Affinity Capture-RNA
PCL10 YGL134W Pho85p cyclin physical 1 1 1 Affinity Capture-RNA
YJR056C YJR056C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YER134C YER134C Magnesium-dependent acid phosphatase physical 1 1 1 Affinity Capture-RNA
TAD1 YGL243W tRNA-specific adenosine deaminase physical 1 1 1 Affinity Capture-RNA
PEX5 YDR244W Peroxisomal membrane signal receptor for peroxisomal matrix proteins physical 1 1 1 Affinity Capture-RNA
VHT1 YGR065C High-affinity plasma membrane H+-biotin (vitamin H) symporter physical 1 1 1 Affinity Capture-RNA
ESC8 YOL017W Protein involved in telomeric and mating-type locus silencing physical 1 1 1 Affinity Capture-RNA
TTI2 YJR136C Subunit of the ASTRA complex, involved in chromatin remodeling physical 1 1 1 Affinity Capture-RNA
SLX8 YER116C Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex physical 1 1 1 Affinity Capture-RNA
DCS1 YLR270W Non-essential hydrolase involved in mRNA decapping physical 1 1 1 Affinity Capture-RNA
UPC2 YDR213W Sterol regulatory element binding protein physical 1 1 1 Affinity Capture-RNA
GEA1 YJR031C Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs) physical 1 1 1 Affinity Capture-RNA
RAX2 YLR084C Protein required for the maintenance of bud site selection physical 1 1 1 Affinity Capture-RNA
MRX12 YJR003C Protein that associates with mitochondrial ribosome physical 1 1 1 Affinity Capture-RNA
URK1 YNR012W Uridine/cytidine kinase physical 1 1 1 Affinity Capture-RNA
LYS1 YIR034C Saccharopine dehydrogenase (NAD+, L-lysine-forming) physical 1 1 1 Affinity Capture-RNA
MYO2 YOR326W Type V myosin motor involved in actin-based transport of cargos physical 1 1 1 Affinity Capture-RNA
MYO2 YOR326W Type V myosin motor involved in actin-based transport of cargos genetic 1 1 1 Negative Genetic
VAC14 YLR386W Enzyme regulator physical 1 1 1 Affinity Capture-RNA
VAC14 YLR386W Enzyme regulator genetic 1 1 1 Synthetic Growth Defect
TPS1 YBR126C Synthase subunit of trehalose-6-P synthase/phosphatase complex physical 1 1 1 Affinity Capture-RNA
RPL7A YGL076C Ribosomal 60S subunit protein L7A physical 1 1 1 Affinity Capture-RNA
KEX2 YNL238W Kexin, a subtilisin-like protease (proprotein convertase) physical 1 1 1 Affinity Capture-RNA
YCR016W YCR016W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YKR018C YKR018C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
CRT10 YOL063C Protein required for the degradation of mutant 25S rRNAs physical 1 1 1 Affinity Capture-RNA
SCS3 YGL126W Protein required for normal ER membrane biosynthesis in response to ER physical 1 1 1 Affinity Capture-RNA
SCH9 YHR205W AGC family protein kinase physical 1 1 1 Affinity Capture-RNA
DPB4 YDR121W Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex physical 1 1 1 Affinity Capture-RNA
CLN2 YPL256C G1 cyclin involved in regulation of the cell cycle physical 1 1 1 Affinity Capture-RNA
YEL025C YEL025C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RSA4 YCR072C Ribosomal large subunit (60S) assembly factor physical 1 1 1 Affinity Capture-RNA
CLP1 YOR250C Component of the cleavage and polyadenylation factor I (CF I) physical 1 1 1 Affinity Capture-RNA
CHK1 YBR274W Serine/threonine kinase and DNA damage checkpoint effector physical 1 1 1 Affinity Capture-RNA
SED1 YDR077W Major stress-induced structural GPI-cell wall glycoprotein physical 1 1 1 Affinity Capture-RNA
PBY1 YBR094W Putative tubulin tyrosine ligase associated with P-bodies physical 1 1 1 Affinity Capture-RNA
YOR111W YOR111W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YIH1 YCR059C Negative regulator of eIF2 kinase Gcn2p physical 1 1 1 Affinity Capture-RNA
FRE1 YLR214W Ferric reductase and cupric reductase physical 1 1 1 Affinity Capture-RNA
PEA2 YER149C Coiled-coil 12S polarisome subunit physical 1 1 1 Affinity Capture-RNA
PEX25 YPL112C Peripheral peroxisomal membrane peroxin physical 1 1 1 Affinity Capture-RNA
MRPS12 YNR036C Mitochondrial protein physical 1 1 1 Affinity Capture-RNA
MRS6 YOR370C Rab escort protein physical 1 1 1 Affinity Capture-RNA
CTP1 YBR291C Mitochondrial inner membrane citrate transporter physical 1 1 1 Affinity Capture-RNA
UBP8 YMR223W Ubiquitin-specific protease component of the SAGA acetylation complex physical 1 1 1 Affinity Capture-RNA
CDC1 YDR182W Putative mannose-ethanolamine phosphate phosphodiesterase physical 1 1 1 Affinity Capture-RNA
YPS1 YLR120C Aspartic protease physical 1 1 1 Affinity Capture-RNA
NAS6 YGR232W Evolutionarily conserved 19S regulatory particle assembly-chaperone physical 1 1 1 Affinity Capture-RNA
SHO1 YER118C Transmembrane osmosensor for filamentous growth and HOG pathways physical 1 1 1 Affinity Capture-RNA
TRM5 YHR070W tRNA(m(1)G37)methyltransferase physical 1 1 1 Affinity Capture-RNA
IPA1 YJR141W Protein implicated in pre-mRNA processing and proteasomal degradation physical 1 1 1 Affinity Capture-RNA
VAM6 YDL077C Guanine nucleotide exchange factor for the GTPase Gtr1p physical 1 1 1 Affinity Capture-RNA
VAM6 YDL077C Guanine nucleotide exchange factor for the GTPase Gtr1p genetic 1 1 1 Negative Genetic
NEO1 YIL048W Phospholipid translocase (flippase) physical 1 1 1 Affinity Capture-RNA
SEC72 YLR292C Non-essential subunit of Sec63 complex physical 1 1 1 Affinity Capture-RNA
SUR7 YML052W Plasma membrane protein, component of eisosomes physical 1 1 1 Affinity Capture-RNA
NUP85 YJR042W Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
GLO3 YER122C ADP-ribosylation factor GTPase activating protein (ARF GAP) physical 1 1 1 Affinity Capture-RNA
NAM7 YMR080C ATP-dependent RNA helicase of the SFI superfamily physical 1 1 1 Affinity Capture-RNA
NAM7 YMR080C ATP-dependent RNA helicase of the SFI superfamily genetic 1 1 1 Phenotypic Enhancement
RPF2 YKR081C Essential protein involved in rRNA maturation and ribosomal assembly physical 1 1 1 Affinity Capture-RNA
NAF1 YNL124W RNA-binding protein required for the assembly of box H/ACA snoRNPs physical 1 1 1 Affinity Capture-RNA
SNA3 YJL151C Protein involved in efficient MVB sorting of proteins to the vacuole physical 1 1 1 Affinity Capture-RNA
PER33 YLR064W Protein that localizes to the endoplasmic reticulum physical 1 1 1 Affinity Capture-RNA
RPL15B YMR121C Ribosomal 60S subunit protein L15B physical 1 1 1 Affinity Capture-RNA
PUF6 YDR496C Pumilio-homology domain protein physical 1 1 1 Affinity Capture-RNA
PUF6 YDR496C Pumilio-homology domain protein genetic 1 1 1 Synthetic Rescue
TIR1 YER011W Cell wall mannoprotein physical 1 1 1 Affinity Capture-RNA
LOT5 YKL183W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MET12 YPL023C Protein with MTHFR activity in vitro physical 1 1 1 Affinity Capture-RNA
YMC1 YPR058W Secondary mitochondrial inner membrane glycine transporter physical 1 1 1 Affinity Capture-RNA
NTA1 YJR062C Amidase physical 1 1 1 Affinity Capture-RNA
TPK3 YKL166C cAMP-dependent protein kinase catalytic subunit physical 1 1 1 Affinity Capture-RNA
NIT2 YJL126W Nit protein physical 1 1 1 Affinity Capture-RNA
SVL3 YPL032C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RPN6 YDL097C Essential, non-ATPase regulatory subunit of the 26S proteasome lid physical 1 1 1 Affinity Capture-RNA
RPN6 YDL097C Essential, non-ATPase regulatory subunit of the 26S proteasome lid genetic 1 1 1 Negative Genetic
GPD2 YOL059W NAD-dependent glycerol 3-phosphate dehydrogenase physical 1 1 1 Affinity Capture-RNA
HSL1 YKL101W Nim1p-related protein kinase physical 1 1 1 Affinity Capture-RNA
PTM1 YKL039W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
GID8 YMR135C Subunit of GID Complex, binds strongly to central component Vid30p physical 1 1 1 Affinity Capture-RNA
TAT1 YBR069C Amino acid transporter for valine, leucine, isoleucine, and tyrosine physical 1 1 1 Affinity Capture-RNA
CLC1 YGR167W Clathrin light chain physical 1 1 1 Affinity Capture-RNA
RGD1 YBR260C GTPase-activating protein (RhoGAP) for Rho3p and Rho4p physical 1 1 1 Affinity Capture-RNA
RNH201 YNL072W Ribonuclease H2 catalytic subunit physical 1 1 1 Affinity Capture-RNA
MCM6 YGL201C Protein involved in DNA replication physical 1 1 1 Affinity Capture-RNA
RPC34 YNR003C RNA polymerase III subunit C34 physical 1 1 1 Affinity Capture-RNA
SAL1 YNL083W ADP/ATP transporter physical 1 1 1 Affinity Capture-RNA
GCD10 YNL062C Subunit of tRNA (1-methyladenosine) methyltransferase with Gcd14p physical 1 1 1 Affinity Capture-RNA
SYP1 YCR030C Negative regulator of WASP-Arp23 complex physical 1 1 1 Affinity Capture-RNA
TRP2 YER090W Anthranilate synthase physical 1 1 1 Affinity Capture-RNA
YJR120W YJR120W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
KRE9 YJL174W Glycoprotein involved in cell wall beta-glucan assembly physical 1 1 1 Affinity Capture-RNA
SIT4 YDL047W Ceramide-activated, type 2A-related serine-threonine phosphatase physical 1 1 1 Affinity Capture-RNA
YHR078W YHR078W High osmolarity-regulated gene of unknown function physical 1 1 1 Affinity Capture-RNA
CYC8 YBR112C General transcriptional co-repressor physical 1 1 1 Affinity Capture-RNA
FCF2 YLR051C Nucleolar protein involved in the early steps of 35S rRNA processing physical 1 1 1 Affinity Capture-RNA
FUR4 YBR021W Plasma membrane localized uracil permease physical 1 1 1 Affinity Capture-RNA
PHO84 YML123C High-affinity inorganic phosphate (Pi) transporter physical 1 1 1 Affinity Capture-RNA
POR2 YIL114C Putative mitochondrial porin (voltage-dependent anion channel) physical 1 1 1 Affinity Capture-RNA
UBA2 YDR390C Subunit of heterodimeric nuclear SUMO activating enzyme E1 with Aos1p physical 1 1 1 Affinity Capture-RNA
YNL193W YNL193W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
GRX1 YCL035C Glutathione-dependent disulfide oxidoreductase physical 1 1 1 Affinity Capture-RNA
YLL058W YLL058W Putative protein of unknown function with similarity to Str2p physical 1 1 1 Affinity Capture-RNA
DNF1 YER166W Aminophospholipid translocase (flippase) physical 1 1 1 Affinity Capture-RNA
TEL2 YGR099W Subunit of the ASTRA complex, involved in chromatin remodeling physical 1 1 1 Affinity Capture-RNA
YGL082W YGL082W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SEC20 YDR498C Membrane glycoprotein v-SNARE physical 1 1 1 Affinity Capture-RNA
KAE1 YKR038C Highly conserved ATPase of HSP70/DnaK family physical 1 1 1 Affinity Capture-RNA
HSH155 YMR288W U2-snRNP associated splicing factor physical 1 1 1 Affinity Capture-RNA
YNL134C YNL134C NADH-dependent aldehyde reductase physical 1 1 1 Affinity Capture-RNA
LTV1 YKL143W Subunit of the EGO/GSE complex physical 1 1 1 Affinity Capture-RNA
MED1 YPR070W Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
UBR2 YLR024C Cytoplasmic ubiquitin-protein ligase (E3) physical 1 1 1 Affinity Capture-RNA
GPN2 YOR262W Putative GTPase with a specific role in RNA pol II and polIII biogenes physical 1 1 1 Affinity Capture-RNA
GPN2 YOR262W Putative GTPase with a specific role in RNA pol II and polIII biogenes genetic 1 1 1 Negative Genetic
GSH1 YJL101C Gamma glutamylcysteine synthetase physical 1 1 1 Affinity Capture-RNA
PEP3 YLR148W Component of CORVET membrane tethering complex physical 1 1 1 Affinity Capture-RNA
SPT4 YGR063C Spt4p/5p (DSIF) transcription elongation factor complex subunit physical 1 1 1 Affinity Capture-RNA
SPG5 YMR191W Protein required for proteasome assembly during quiescence physical 1 1 1 Affinity Capture-RNA
RNH70 YGR276C 3'-5' exoribonuclease physical 1 1 1 Affinity Capture-RNA
NUP145 YGL092W Essential protein with distinct roles in two nuclear pore subcomplexes physical 1 1 1 Affinity Capture-RNA
CKA2 YOR061W Alpha' catalytic subunit of casein kinase 2 (CK2) physical 1 1 1 Affinity Capture-RNA
SCP1 YOR367W Component of yeast cortical actin cytoskeleton physical 1 1 1 Affinity Capture-RNA
GET2 YER083C Subunit of the GET complex physical 1 1 1 Affinity Capture-RNA
MUK1 YPL070W Guanine nucleotide exchange factor (GEF) physical 1 1 1 Affinity Capture-RNA
YVH1 YIR026C Dual specificity protein phosphatase physical 1 1 1 Affinity Capture-RNA
PNP1 YLR209C Purine nucleoside phosphorylase physical 1 1 1 Affinity Capture-RNA
ROT1 YMR200W Molecular chaperone involved in protein folding in ER physical 1 1 1 Affinity Capture-RNA
YIP1 YGR172C Integral membrane protein physical 1 1 1 Affinity Capture-RNA
DBR1 YKL149C RNA lariat debranching enzyme physical 1 1 1 Affinity Capture-RNA
MCM7 YBR202W Component of the Mcm2-7 hexameric helicase complex physical 1 1 1 Affinity Capture-RNA
PGC1 YPL206C Phosphatidylglycerol phospholipase C physical 1 1 1 Affinity Capture-RNA
PTC4 YBR125C Cytoplasmic type 2C protein phosphatase (PP2C) physical 1 1 1 Affinity Capture-RNA
UTP25 YIL091C Nucleolar protein physical 1 1 1 Affinity Capture-RNA
CKI1 YLR133W Choline kinase physical 1 1 1 Affinity Capture-RNA
TAF10 YDR167W Subunit (145 kDa) of TFIID and SAGA complexes physical 1 1 1 Affinity Capture-RNA
MRP8 YKL142W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
GLN1 YPR035W Glutamine synthetase (GS) physical 1 1 1 Affinity Capture-RNA
CKA1 YIL035C Alpha catalytic subunit of casein kinase 2 (CK2) physical 1 1 1 Affinity Capture-RNA
QCR2 YPR191W Subunit 2 of ubiquinol cytochrome-c reductase (Complex III) physical 1 1 1 Affinity Capture-RNA
SEC1 YDR164C Sm-like protein involved in docking and fusion of exocytic vesicles physical 1 1 1 Affinity Capture-RNA
GAT2 YMR136W Protein containing GATA family zinc finger motifs physical 1 1 1 Affinity Capture-RNA
SRO7 YPR032W Effector of Rab GTPase Sec4p physical 1 1 1 Affinity Capture-RNA
SEC11 YIR022W 18kDa catalytic subunit of the Signal Peptidase Complex (SPC) physical 1 1 1 Affinity Capture-RNA
PFA4 YOL003C Palmitoyltransferase with autoacylation activity physical 1 1 1 Affinity Capture-RNA
YOR342C YOR342C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
CDC14 YFR028C Protein phosphatase required for mitotic exit physical 1 1 1 Affinity Capture-RNA
SAT4 YCR008W Ser/Thr protein kinase involved in salt tolerance, nutrient response physical 1 1 1 Affinity Capture-RNA
SEN1 YLR430W ATP-dependent 5' to 3' RNA/DNA and DNA helicase physical 1 1 1 Affinity Capture-RNA
PRM5 YIL117C Pheromone-regulated protein, predicted to have 1 transmembrane segment physical 1 1 1 Affinity Capture-RNA
SDH1 YKL148C Flavoprotein subunit of succinate dehydrogenase physical 1 1 1 Affinity Capture-RNA
RRD2 YPL152W Peptidyl-prolyl cis/trans-isomerase physical 1 1 1 Affinity Capture-RNA
YDL086W YDL086W Putative carboxymethylenebutenolidase physical 1 1 1 Affinity Capture-RNA
SEN34 YAR008W Subunit of the tRNA splicing endonuclease physical 1 1 1 Affinity Capture-RNA
YIL001W YIL001W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
NUF2 YOL069W Component of the kinetochore-associated Ndc80 complex physical 1 1 1 Affinity Capture-RNA
TOM1 YDR457W E3 ubiquitin ligase of the hect-domain class physical 1 1 1 Affinity Capture-RNA
VSB1 YGR125W Vacuolar membrane protein required for uptake and storage of arginine physical 1 1 1 Affinity Capture-RNA
DET1 YDR051C Acid phosphatase physical 1 1 1 Affinity Capture-RNA
VTA1 YLR181C Multivesicular body (MVB) protein physical 1 1 1 Affinity Capture-RNA
YDR476C YDR476C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
FET5 YFL041W Multicopper oxidase physical 1 1 1 Affinity Capture-RNA
ERG24 YNL280C C-14 sterol reductase physical 1 1 1 Affinity Capture-RNA
NET1 YJL076W Core subunit of the RENT complex physical 1 1 1 Affinity Capture-RNA
SIR3 YLR442C Silencing protein physical 1 1 1 Affinity Capture-RNA
NUP159 YIL115C FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
NBA1 YOL070C Protein involved in axial bud site selection physical 1 1 1 Affinity Capture-RNA
SPT16 YGL207W Subunit of the heterodimeric FACT complex (Spt16p-Pob3p) physical 1 1 1 Affinity Capture-RNA
SPT16 YGL207W Subunit of the heterodimeric FACT complex (Spt16p-Pob3p) genetic 1 1 1 Synthetic Lethality
DUR12 YBR208C Urea amidolyase physical 1 1 1 Affinity Capture-RNA
YPF1 YKL100C Intramembrane aspartyl protease of the perinuclear ER membrane physical 1 1 1 Affinity Capture-RNA
DSE4 YNR067C Daughter cell-specific secreted protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
CDC20 YGL116W Activator of anaphase-promoting complex/cyclosome (APC/C) physical 1 1 1 Affinity Capture-RNA
CDC20 YGL116W Activator of anaphase-promoting complex/cyclosome (APC/C) genetic 1 1 1 Negative Genetic
SSF2 YDR312W Protein required for ribosomal large subunit maturation physical 1 1 1 Affinity Capture-RNA
TRP3 YKL211C Indole-3-glycerol-phosphate synthase physical 1 1 1 Affinity Capture-RNA
TSR2 YLR435W Protein with a potential role in pre-rRNA processing physical 1 1 1 Affinity Capture-RNA
RRT14 YIL127C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PTC5 YOR090C Mitochondrial type 2C protein phosphatase (PP2C) physical 1 1 1 Affinity Capture-RNA
TOA1 YOR194C TFIIA large subunit physical 1 1 1 Affinity Capture-RNA
TOA1 YOR194C TFIIA large subunit genetic 1 1 1 Negative Genetic
CDC43 YGL155W Beta subunit of geranylgeranyltransferase type I physical 1 1 1 Affinity Capture-RNA
TRM112 YNR046W Protein involved in methylation of tRNA, rRNA, and translation factors physical 1 1 1 Affinity Capture-RNA
LOG1 YJL055W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
DUN1 YDL101C Cell-cycle checkpoint S/T protein kinase physical 1 1 1 Affinity Capture-RNA
REV1 YOR346W Deoxycytidyl transferase physical 1 1 1 Affinity Capture-RNA
ERV29 YGR284C Protein localized to COPII-coated vesicles physical 1 1 1 Affinity Capture-RNA
HFI1 YPL254W Adaptor protein required for structural integrity of the SAGA complex physical 1 1 1 Affinity Capture-RNA
PRP31 YGR091W Splicing factor physical 1 1 1 Affinity Capture-RNA
RRD1 YIL153W Peptidyl-prolyl cis/trans-isomerase physical 1 1 1 Affinity Capture-RNA
POB3 YML069W Subunit of the heterodimeric FACT complex (Spt16p-Pob3p) physical 1 1 1 Affinity Capture-RNA
VPS62 YGR141W Vacuolar protein sorting (VPS) protein physical 1 1 1 Affinity Capture-RNA
SSY1 YDR160W Component of the SPS plasma membrane amino acid sensor system physical 1 1 1 Affinity Capture-RNA
UFO1 YML088W F-box receptor protein physical 1 1 1 Affinity Capture-RNA
GOS1 YHL031C v-SNARE protein involved in Golgi transport physical 1 1 1 Affinity Capture-RNA
VPS35 YJL154C Endosomal subunit of membrane-associated retromer complex physical 1 1 1 Affinity Capture-RNA
VPS35 YJL154C Endosomal subunit of membrane-associated retromer complex genetic 1 1 1 Negative Genetic
GCD1 YOR260W Gamma subunit of the translation initiation factor eIF2B physical 1 1 1 Affinity Capture-RNA
UBP2 YOR124C Ubiquitin-specific protease physical 1 1 1 Affinity Capture-RNA
SRB4 YER022W Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
TOM22 YNL131W Component of the TOM (Translocase of Outer Membrane) complex physical 1 1 1 Affinity Capture-RNA
PNS1 YOR161C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
IRA2 YOL081W GTPase-activating protein physical 1 1 1 Affinity Capture-RNA
HOT13 YKL084W Zinc-binding mitochondrial intermembrane space (IMS) protein physical 1 1 1 Affinity Capture-RNA
ECM27 YJR106W Protein involved in calcium homeostasis and exit from quiescence physical 1 1 1 Affinity Capture-RNA
PHO89 YBR296C Plasma membrane Na+/Pi cotransporter physical 1 1 1 Affinity Capture-RNA
YEL1 YBL060W Guanine nucleotide exchange factor specific for Arf3p physical 1 1 1 Affinity Capture-RNA
SAS10 YDL153C Subunit of U3-containing Small Subunit (SSU) processome complex physical 1 1 1 Affinity Capture-RNA
SSO1 YPL232W Plasma membrane t-SNARE physical 1 1 1 Affinity Capture-RNA
SWA2 YDR320C Auxilin-like protein involved in vesicular transport physical 1 1 1 Affinity Capture-RNA
MSH6 YDR097C Protein required for mismatch repair in mitosis and meiosis physical 1 1 1 Affinity Capture-RNA
ERG5 YMR015C C-22 sterol desaturase physical 1 1 1 Affinity Capture-RNA
MRD1 YPR112C Essential conserved small ribosomal subunit (40s) synthesis factor physical 1 1 1 Affinity Capture-RNA
LTP1 YPR073C Protein phosphotyrosine phosphatase of unknown cellular role physical 1 1 1 Affinity Capture-RNA
WTM2 YOR229W Transcriptional modulator physical 1 1 1 Affinity Capture-RNA
GRX7 YBR014C Cis-golgi localized monothiol glutaredoxin physical 1 1 1 Affinity Capture-RNA
PSR2 YLR019W Putative plasma membrane phosphatase physical 1 1 1 Affinity Capture-RNA
RRP9 YPR137W Protein involved in pre-rRNA processing physical 1 1 1 Affinity Capture-RNA
SBH2 YER019C-A Ssh1p-Sss1p-Sbh2p complex component physical 1 1 1 Affinity Capture-RNA
YER010C YER010C Bifunctional HMG aldolase/oxaloacetate decarboxylase physical 1 1 1 Affinity Capture-RNA
YND1 YER005W Apyrase with wide substrate specificity physical 1 1 1 Affinity Capture-RNA
ITR2 YOL103W Myo-inositol transporter physical 1 1 1 Affinity Capture-RNA
PRP11 YDL043C Subunit of the SF3a splicing factor complex physical 1 1 1 Affinity Capture-RNA
PRP11 YDL043C Subunit of the SF3a splicing factor complex genetic 1 1 1 Negative Genetic
EDE1 YBL047C Scaffold protein involved in the formation of early endocytic sites physical 1 1 1 Affinity Capture-RNA
PBN1 YCL052C Component of glycosylphosphatidylinositol-mannosyltransferase I physical 1 1 1 Affinity Capture-RNA
UTP13 YLR222C Nucleolar protein physical 1 1 1 Affinity Capture-RNA
YPD1 YDL235C Osmotic stress-responsive phosphorelay intermediate sensor protein physical 1 1 1 Affinity Capture-RNA
YKL063C YKL063C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PAM17 YKR065C Constituent of the TIM23 complex physical 1 1 1 Affinity Capture-RNA
NHP6A YPR052C High-mobility group (HMG) protein physical 1 1 1 Affinity Capture-RNA
YBR137W YBR137W Protein with a role in ER delivery of tail-anchored membrane proteins physical 1 1 1 Affinity Capture-RNA
MDY2 YOL111C Protein involved in inserting tail-anchored proteins into ER membranes physical 1 1 1 Affinity Capture-RNA
TDA3 YHR009C Putative oxidoreductase involved in late endosome to Golgi transport physical 1 1 1 Affinity Capture-RNA
NUP116 YMR047C FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
PIK1 YNL267W Phosphatidylinositol 4-kinase physical 1 1 1 Affinity Capture-RNA
GPI18 YBR004C Functional ortholog of human PIG-V physical 1 1 1 Affinity Capture-RNA
PST1 YDR055W Cell wall protein that contains a putative GPI-attachment site physical 1 1 1 Affinity Capture-RNA
HSP104 YLL026W Disaggregase physical 1 1 1 Affinity Capture-RNA
RPC10 YHR143W-A RNA polymerase subunit ABC10-alpha, found in RNA pol I, II, and III physical 1 1 1 Affinity Capture-RNA
LOA1 YPR139C Lysophosphatidic acid acyltransferase physical 1 1 1 Affinity Capture-RNA
SIL1 YOL031C Nucleotide exchange factor for the ER lumenal Hsp70 chaperone Kar2p physical 1 1 1 Affinity Capture-RNA
POL1 YNL102W Catalytic subunit of the DNA polymerase I alpha-primase complex physical 1 1 1 Affinity Capture-RNA
POL1 YNL102W Catalytic subunit of the DNA polymerase I alpha-primase complex genetic 1 1 1 Negative Genetic
COT1 YOR316C Vacuolar transporter that mediates zinc transport into the vacuole physical 1 1 1 Affinity Capture-RNA
SEC10 YLR166C Essential 100kDa subunit of the exocyst complex physical 1 1 1 Affinity Capture-RNA
STV1 YMR054W Subunit a of the vacuolar-ATPase V0 domain physical 1 1 1 Affinity Capture-RNA
SFH5 YJL145W Unusual phosphatidylinositol transfer protein (PITP) that binds heme physical 1 1 1 Affinity Capture-RNA
ZRT2 YLR130C Low-affinity zinc transporter of the plasma membrane physical 1 1 1 Affinity Capture-RNA
SRB2 YHR041C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
SRB2 YHR041C Subunit of the RNA polymerase II mediator complex genetic 1 1 1 Synthetic Lethality
DYN1 YKR054C Cytoplasmic heavy chain dynein physical 1 1 1 Affinity Capture-RNA
RPN14 YGL004C Evolutionarily conserved 19S regulatory particle assembly-chaperone physical 1 1 1 Affinity Capture-RNA
RFT1 YBL020W Membrane protein required for translocation of Man5GlcNac2-PP-Dol physical 1 1 1 Affinity Capture-RNA
PPN1 YDR452W Dual endo- and exopolyphosphatase with a role in phosphate metabolism physical 1 1 1 Affinity Capture-RNA
YDL109C YDL109C Putative lipase physical 1 1 1 Affinity Capture-RNA
VPS38 YLR360W Part of a Vps34p phosphatidylinositol 3-kinase complex physical 1 1 1 Affinity Capture-RNA
COG8 YML071C Component of the conserved oligomeric Golgi complex physical 1 1 1 Affinity Capture-RNA
YGR122W YGR122W Protein that may be involved in pH regulation physical 1 1 1 Affinity Capture-RNA
UBP12 YJL197W Ubiquitin-specific protease physical 1 1 1 Affinity Capture-RNA
RTC5 YOR118W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RIO1 YOR119C Serine kinase involved in cell cycle regulation and rDNA integrity physical 1 1 1 Affinity Capture-RNA
YSA1 YBR111C Nudix hydrolase family member with ADP-ribose pyrophosphatase activity physical 1 1 1 Affinity Capture-RNA
RDL2 YOR286W Protein with rhodanese activity physical 1 1 1 Affinity Capture-RNA
NUP82 YJL061W Linker nucleoporin component of the nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
CPA2 YJR109C Large subunit of carbamoyl phosphate synthetase physical 1 1 1 Affinity Capture-RNA
CTM1 YHR109W Cytochrome c lysine methyltransferase physical 1 1 1 Affinity Capture-RNA
UNG1 YML021C Uracil-DNA glycosylase physical 1 1 1 Affinity Capture-RNA
HIS5 YIL116W Histidinol-phosphate aminotransferase physical 1 1 1 Affinity Capture-RNA
LEU3 YLR451W Zinc-knuckle transcription factor, repressor and activator physical 1 1 1 Affinity Capture-RNA
CPR8 YNR028W Peptidyl-prolyl cis-trans isomerase (cyclophilin) physical 1 1 1 Affinity Capture-RNA
TRS33 YOR115C Core component of TRAPP complexes I, II and IV physical 1 1 1 Affinity Capture-RNA
CNE1 YAL058W Calnexin physical 1 1 1 Affinity Capture-RNA
RPN5 YDL147W Subunit of the CSN and 26S proteasome lid complexes physical 1 1 1 Affinity Capture-RNA
RPN5 YDL147W Subunit of the CSN and 26S proteasome lid complexes genetic 1 1 1 Negative Genetic
PSY2 YNL201C Subunit of protein phosphatase PP4 complex physical 1 1 1 Affinity Capture-RNA
HDA1 YNL021W Catalytic subunit of class II HDA1 histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
UBP1 YDL122W Ubiquitin-specific protease physical 1 1 1 Affinity Capture-RNA
ESF2 YNR054C Essential nucleolar protein involved in pre-18S rRNA processing physical 1 1 1 Affinity Capture-RNA
YGR111W YGR111W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
NUP49 YGL172W FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
DSD1 YGL196W D-serine dehydratase (aka D-serine ammonia-lyase) physical 1 1 1 Affinity Capture-RNA
SVF1 YDR346C Protein with a potential role in cell survival pathways physical 1 1 1 Affinity Capture-RNA
NUP60 YAR002W FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
NUP60 YAR002W FG-nucleoporin component of central core of the nuclear pore complex genetic 1 1 1 Synthetic Growth Defect
DIP5 YPL265W Dicarboxylic amino acid permease physical 1 1 1 Affinity Capture-RNA
SCM4 YGR049W Mitochondrial outer membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
SHS1 YDL225W Component of the septin ring that is required for cytokinesis physical 1 1 1 Affinity Capture-RNA
SHS1 YDL225W Component of the septin ring that is required for cytokinesis genetic 1 1 1 Synthetic Growth Defect
VPS36 YLR417W Component of the ESCRT-II complex physical 1 1 1 Affinity Capture-RNA
VPS36 YLR417W Component of the ESCRT-II complex genetic 1 1 1 Synthetic Lethality
PSD2 YGR170W Phosphatidylserine decarboxylase of the Golgi and vacuolar membranes physical 1 1 1 Affinity Capture-RNA
RKM2 YDR198C Ribosomal protein lysine methyltransferase physical 1 1 1 Affinity Capture-RNA
ZRT1 YGL255W High-affinity zinc transporter of the plasma membrane physical 1 1 1 Affinity Capture-RNA
LSP1 YPL004C Eisosome core component physical 1 1 1 Affinity Capture-RNA
YJL206C YJL206C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
ERG3 YLR056W C-5 sterol desaturase physical 1 1 1 Affinity Capture-RNA
USA1 YML029W Scaffold subunit of the Hrd1p ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
RKM3 YBR030W Ribosomal lysine methyltransferase physical 1 1 1 Affinity Capture-RNA
GPA1 YHR005C Subunit of G protein involved in pheromone response physical 1 1 1 Affinity Capture-RNA
YME1 YPR024W Catalytic subunit of i-AAA protease complex physical 1 1 1 Affinity Capture-RNA
HOS1 YPR068C Class I histone deacetylase (HDAC) family member physical 1 1 1 Affinity Capture-RNA
DHH1 YDL160C Cytoplasmic DEAD-box helicase and mRNA decapping activator physical 1 1 1 Affinity Capture-RNA
HIS3 YOR202W Imidazoleglycerol-phosphate dehydratase physical 1 1 1 Affinity Capture-RNA
GLE2 YER107C RNA export factor associated with the nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
MAK10 YEL053C Non-catalytic subunit of the NatC N-terminal acetyltransferase physical 1 1 1 Affinity Capture-RNA
SIN4 YNL236W Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
SIN4 YNL236W Subunit of the RNA polymerase II mediator complex genetic 1 1 1 Synthetic Growth Defect
JHD2 YJR119C JmjC domain family histone demethylase physical 1 1 1 Affinity Capture-RNA
SWD2 YKL018W Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex physical 1 1 1 Affinity Capture-RNA
SNP1 YIL061C Component of U1 snRNP required for mRNA splicing via spliceosome physical 1 1 1 Affinity Capture-RNA
PIN4 YBL051C Protein involved in G2/M phase progression and response to DNA damage physical 1 1 1 Affinity Capture-RNA
STE20 YHL007C Cdc42p-activated signal transducing kinase physical 1 1 1 Affinity Capture-RNA
TMN3 YER113C Protein with a role in cellular adhesion and filamentous growth physical 1 1 1 Affinity Capture-RNA
TBF1 YPL128C Telobox-containing general regulatory factor physical 1 1 1 Affinity Capture-RNA
NUP53 YMR153W FG-nucleoporin component of central core of nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
UIP3 YAR027W Putative integral membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
NVJ2 YPR091C Lipid-binding ER protein, enriched at nucleus-vacuolar junctions (NVJ) physical 1 1 1 Affinity Capture-RNA
TCA17 YEL048C Component of transport protein particle (TRAPP) complex II physical 1 1 1 Affinity Capture-RNA
YCK1 YHR135C Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform physical 1 1 1 Affinity Capture-RNA
SUM1 YDR310C Transcriptional repressor that regulates middle-sporulation genes physical 1 1 1 Affinity Capture-RNA
TRA1 YHR099W Subunit of SAGA and NuA4 histone acetyltransferase complexes physical 1 1 1 Affinity Capture-RNA
RPS21A YKR057W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
SHE3 YBR130C Protein adaptor between Myo4p and the She2p-mRNA complex physical 1 1 1 Affinity Capture-RNA
GTB1 YDR221W Glucosidase II beta subunit, forms a complex with alpha subunit Rot2p physical 1 1 1 Affinity Capture-RNA
CLG1 YGL215W Cyclin-like protein that interacts with Pho85p physical 1 1 1 Affinity Capture-RNA
OXR1 YPL196W Protein involved in regulation of vacuolar V-ATPase physical 1 1 1 Affinity Capture-RNA
YDL157C YDL157C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RRP17 YDR412W 5' exoribonuclease required for 5' end processing of pre-60S rRNA physical 1 1 1 Affinity Capture-RNA
HIS7 YBR248C Imidazole glycerol phosphate synthase physical 1 1 1 Affinity Capture-RNA
PUT3 YKL015W Transcriptional activator physical 1 1 1 Affinity Capture-RNA
GPT2 YKR067W Glycerol-3-phosphate/dihydroxyacetone phosphate sn-1 acyltransferase physical 1 1 1 Affinity Capture-RNA
EST2 YLR318W Reverse transcriptase subunit of the telomerase holoenzyme physical 1 1 1 Affinity Capture-RNA
EST2 YLR318W Reverse transcriptase subunit of the telomerase holoenzyme genetic 1 1 1 Phenotypic Enhancement
KTR4 YBR199W Glycosyltransferase involved in protein glycosylation physical 1 1 1 Affinity Capture-RNA
HYM1 YKL189W Component of the RAM signaling network physical 1 1 1 Affinity Capture-RNA
QCR7 YDR529C Subunit 7 of ubiquinol cytochrome-c reductase (Complex III) physical 1 1 1 Affinity Capture-RNA
COG6 YNL041C Component of the conserved oligomeric Golgi complex physical 1 1 1 Affinity Capture-RNA
CHS1 YNL192W Chitin synthase I physical 1 1 1 Affinity Capture-RNA
YAR1 YPL239W Nucleocytoplasmic shuttling assembly chaperone physical 1 1 1 Affinity Capture-RNA
HXT3 YDR345C Low affinity glucose transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
GRE3 YHR104W Aldose reductase physical 1 1 1 Affinity Capture-RNA
IMP1 YMR150C Catalytic subunit of mitochondrial inner membrane peptidase complex physical 1 1 1 Affinity Capture-RNA
MKK1 YOR231W MAPKK involved in the protein kinase C signaling pathway physical 1 1 1 Affinity Capture-RNA
SDD4 YPR022C Putative transcription factor, as suggested by computational analysis physical 1 1 1 Affinity Capture-RNA
VID22 YLR373C G-quadruplex (G4) DNA binding protein physical 1 1 1 Affinity Capture-RNA
VID22 YLR373C G-quadruplex (G4) DNA binding protein genetic 1 1 1 Synthetic Growth Defect
MNE1 YOR350C Protein involved in splicing Group I aI5-beta intron from COX1 mRNA physical 1 1 1 Affinity Capture-RNA
SFH1 YLR321C Component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
NDC1 YML031W Subunit of the transmembrane ring of the nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
RIM9 YMR063W Plasma membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
UGO1 YDR470C Outer membrane component of the mitochondrial fusion machinery physical 1 1 1 Affinity Capture-RNA
VPS45 YGL095C Protein of the Sec1p/Munc-18 family physical 1 1 1 Affinity Capture-RNA
VPS45 YGL095C Protein of the Sec1p/Munc-18 family genetic 1 1 1 Synthetic Growth Defect
ORC4 YPR162C Subunit of the origin recognition complex (ORC) physical 1 1 1 Affinity Capture-RNA
DOP1 YDR141C Protein involved in vesicular transport at trans-Golgi network (TGN) physical 1 1 1 Affinity Capture-RNA
GRH1 YDR517W Acetylated cis-Golgi protein, homolog of human GRASP65 physical 1 1 1 Affinity Capture-RNA
LCP5 YER127W Essential protein involved in maturation of 18S rRNA physical 1 1 1 Affinity Capture-RNA
ICL1 YER065C Isocitrate lyase physical 1 1 1 Affinity Capture-RNA
PAN2 YGL094C Catalytic subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex physical 1 1 1 Affinity Capture-RNA
SUA7 YPR086W Transcription factor TFIIB physical 1 1 1 Affinity Capture-RNA
SUA7 YPR086W Transcription factor TFIIB genetic 1 1 1 Negative Genetic
RFS1 YBR052C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
DNM1 YLL001W Dynamin-related GTPase involved in mitochondrial organization physical 1 1 1 Affinity Capture-RNA
MYO5 YMR109W One of two type I myosin motors physical 1 1 1 Affinity Capture-RNA
CIC1 YHR052W Essential protein that interacts with proteasome components physical 1 1 1 Affinity Capture-RNA
TIF4632 YGL049C Translation initiation factor eIF4G and scaffold protein physical 1 1 1 Affinity Capture-RNA
SAM35 YHR083W Component of the sorting and assembly machinery (SAM) complex physical 1 1 1 Affinity Capture-RNA
TPN1 YGL186C Plasma membrane pyridoxine (vitamin B6) transporter physical 1 1 1 Affinity Capture-RNA
YRA2 YKL214C Member of the REF (RNA and export factor binding proteins) family physical 1 1 1 Affinity Capture-RNA
CUZ1 YNL155W Protein with a role in the ubiquitin-proteasome pathway physical 1 1 1 Affinity Capture-RNA
VLD1 YIR014W Component of Dsc E3 ligase complex in vacuolar membranes physical 1 1 1 Affinity Capture-RNA
COX23 YHR116W Protein that functions in mitochondrial copper homeostasis physical 1 1 1 Affinity Capture-RNA
RXT3 YDL076C Component of the Rpd3L histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
SDS22 YKL193C Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p physical 1 1 1 Affinity Capture-RNA
YKL222C YKL222C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
NMT1 YLR195C N-myristoyl transferase physical 1 1 1 Affinity Capture-RNA
NMT1 YLR195C N-myristoyl transferase genetic 1 1 1 Negative Genetic
MRPL13 YKR006C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
HRK1 YOR267C Protein kinase physical 1 1 1 Affinity Capture-RNA
HRK1 YOR267C Protein kinase genetic 1 1 1 Dosage Growth Defect
GAL80 YML051W Transcriptional regulator involved in the repression of GAL genes physical 1 1 1 Affinity Capture-RNA
LST8 YNL006W Protein required for the transport of Gap1p physical 1 1 1 Affinity Capture-RNA
NRE1 YIR035C Putative cytoplasmic short-chain dehydrogenase/reductase physical 1 1 1 Affinity Capture-RNA
CUE4 YML101C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
EXO5 YBR163W Mitochondrial 5'-3' exonuclease and sliding exonuclease physical 1 1 1 Affinity Capture-RNA
YPR147C YPR147C Bifunctional triacylglycerol lipase and short chain ester hydrolase physical 1 1 1 Affinity Capture-RNA
SEC16 YPL085W COPII vesicle coat protein required for ER transport vesicle budding physical 1 1 1 Affinity Capture-RNA
YNL115C YNL115C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PAN6 YIL145C Pantothenate synthase physical 1 1 1 Affinity Capture-RNA
HTA2 YBL003C Histone H2A physical 1 1 1 Affinity Capture-RNA
PRP28 YDR243C Pre-mRNA splicing factor physical 1 1 1 Affinity Capture-RNA
RSC6 YCR052W Component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
IML3 YBR107C Outer kinetochore protein and component of the Ctf19 complex physical 1 1 1 Affinity Capture-RNA
NBP2 YDR162C Protein involved in the HOG (high osmolarity glycerol) pathway physical 1 1 1 Affinity Capture-RNA
SKI2 YLR398C Ski complex component and putative RNA helicase physical 1 1 1 Affinity Capture-RNA
NOP15 YNL110C Constituent of 66S pre-ribosomal particles physical 1 1 1 Affinity Capture-RNA
TOF1 YNL273W Subunit of a replication-pausing checkpoint complex physical 1 1 1 Affinity Capture-RNA
PEX19 YDL065C Chaperone and import receptor for newly-synthesized class I PMPs physical 1 1 1 Affinity Capture-RNA
NIS1 YNL078W Protein involved in axial bud site selection physical 1 1 1 Affinity Capture-RNA
GLK1 YCL040W Glucokinase physical 1 1 1 Affinity Capture-RNA
YJU3 YKL094W Monoglyceride lipase (MGL) that hydrolyzes fatty acid ethyl esters physical 1 1 1 Affinity Capture-RNA
SIS2 YKR072C Negative regulatory subunit of protein phosphatase 1 (Ppz1p) physical 1 1 1 Affinity Capture-RNA
DIC1 YLR348C Mitochondrial dicarboxylate carrier physical 1 1 1 Affinity Capture-RNA
TFC4 YGR047C Subunit of RNA polymerase III transcription initiation factor complex physical 1 1 1 Affinity Capture-RNA
MNT4 YNR059W Putative alpha-1,3-mannosyltransferase physical 1 1 1 Affinity Capture-RNA
FCF1 YDR339C PINc domain endonuclease physical 1 1 1 Affinity Capture-RNA
RSC30 YHR056C Component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
EBP2 YKL172W Required for 25S rRNA maturation and 60S ribosomal subunit assembly physical 1 1 1 Affinity Capture-RNA
RAD17 YOR368W Checkpoint protein physical 1 1 1 Affinity Capture-RNA
IRR1 YIL026C Subunit of the cohesin complex physical 1 1 1 Affinity Capture-RNA
LSC2 YGR244C Beta subunit of succinyl-CoA ligase physical 1 1 1 Affinity Capture-RNA
UFD1 YGR048W Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase physical 1 1 1 Affinity Capture-RNA
CEM1 YER061C Mitochondrial beta-keto-acyl synthase physical 1 1 1 Affinity Capture-RNA
MRP21 YBL090W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
POM34 YLR018C Subunit of the transmembrane ring of the nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
PTR2 YKR093W Integral membrane peptide transporter physical 1 1 1 Affinity Capture-RNA
TMH11 YJR085C Mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRP1 YDR347W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
PCL6 YER059W Pho85p cyclin of the Pho80p subfamily physical 1 1 1 Affinity Capture-RNA
RHO3 YIL118W Non-essential small GTPase of the Rho/Rac family of Ras-like proteins physical 1 1 1 Affinity Capture-RNA
SET5 YHR207C Methyltransferase involved in methylation of histone H4 Lys5, -8, -12 physical 1 1 1 Affinity Capture-RNA
NUP188 YML103C Subunit of the inner ring of the nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
CET1 YPL228W RNA 5'-triphosphatase involved in mRNA 5' capping physical 1 1 1 Affinity Capture-RNA
CET1 YPL228W RNA 5'-triphosphatase involved in mRNA 5' capping genetic 1 1 1 Negative Genetic
MOT1 YPL082C Essential protein involved in regulation of transcription physical 1 1 1 Affinity Capture-RNA
CQD1 YPL109C UbiB family mitochondrial protein physical 1 1 1 Affinity Capture-RNA
GFD2 YCL036W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YEN1 YER041W Holliday junction resolvase physical 1 1 1 Affinity Capture-RNA
FDC1 YDR539W Ferulic acid decarboxylase physical 1 1 1 Affinity Capture-RNA
ZEO1 YOL109W Peripheral membrane protein of the plasma membrane physical 1 1 1 Affinity Capture-RNA
SAN1 YDR143C Ubiquitin-protein ligase physical 1 1 1 Affinity Capture-RNA
YML096W YML096W Putative protein with similarity to asparagine synthetases physical 1 1 1 Affinity Capture-RNA
RPB7 YDR404C RNA polymerase II subunit B16 physical 1 1 1 Affinity Capture-RNA
CPR2 YHR057C Peptidyl-prolyl cis-trans isomerase (cyclophilin) physical 1 1 1 Affinity Capture-RNA
YDR541C YDR541C Aldehyde reductase physical 1 1 1 Affinity Capture-RNA
GLY1 YEL046C Threonine aldolase physical 1 1 1 Affinity Capture-RNA
CWC25 YNL245C Splicing factor required for the first step of pre-mRNA splicing physical 1 1 1 Affinity Capture-RNA
UBA4 YHR111W E1-like protein that activates Urm1p before urmylation physical 1 1 1 Affinity Capture-RNA
CIA1 YDR267C Component of cytosolic iron-sulfur protein assembly (CIA) machinery physical 1 1 1 Affinity Capture-RNA
MAS1 YLR163C Beta subunit of the mitochondrial processing protease (MPP) physical 1 1 1 Affinity Capture-RNA
SMC1 YFL008W Subunit of the multiprotein cohesin complex physical 1 1 1 Affinity Capture-RNA
IRC20 YLR247C E3 ubiquitin ligase and putative helicase physical 1 1 1 Affinity Capture-RNA
YNL208W YNL208W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
KAP120 YPL125W Karyopherin responsible for the nuclear import of Rpf1p physical 1 1 1 Affinity Capture-RNA
NUP120 YKL057C Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
POL2 YNL262W Catalytic subunit of DNA polymerase (II) epsilon physical 1 1 1 Affinity Capture-RNA
CIN1 YOR349W Tubulin folding factor D involved in beta-tubulin (Tub2p) folding physical 1 1 1 Affinity Capture-RNA
SML1 YML058W Ribonucleotide reductase inhibitor physical 1 1 1 Affinity Capture-RNA
COG7 YGL005C Component of the conserved oligomeric Golgi complex physical 1 1 1 Affinity Capture-RNA
CUS2 YNL286W Putative checkpoint factor in transcription physical 1 1 1 Affinity Capture-RNA
DSC2 YOL073C Multi-transmembrane subunit of the DSC ubiquitin ligase complex physical 1 1 1 Affinity Capture-RNA
NAT3 YPR131C Catalytic subunit of the NatB N-terminal acetyltransferase physical 1 1 1 Affinity Capture-RNA
ORC5 YNL261W Subunit of the origin recognition complex (ORC) physical 1 1 1 Affinity Capture-RNA
MAD3 YJL013C Subunit of spindle-assembly checkpoint complex physical 1 1 1 Affinity Capture-RNA
YNR029C YNR029C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YHL017W YHL017W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RPH1 YER169W JmjC domain-containing histone demethylase physical 1 1 1 Affinity Capture-RNA
CMS1 YLR003C Putative subunit of the 90S preribosome processome complex physical 1 1 1 Affinity Capture-RNA
TRS31 YDR472W Core component of transport protein particle (TRAPP) complexes I-III physical 1 1 1 Affinity Capture-RNA
OPY2 YPR075C Integral membrane protein that acts as a membrane anchor for Ste50p physical 1 1 1 Affinity Capture-RNA
ESA1 YOR244W Catalytic subunit of the histone acetyltransferase complex (NuA4) physical 1 1 1 Affinity Capture-RNA
VTI1 YMR197C Protein involved in cis-Golgi membrane traffic physical 1 1 1 Affinity Capture-RNA
RIF1 YBR275C Protein involved in control of DNA replication physical 1 1 1 Affinity Capture-RNA
STE13 YOR219C Dipeptidyl aminopeptidase physical 1 1 1 Affinity Capture-RNA
ESS1 YJR017C Peptidylprolyl-cis/trans-isomerase (PPIase) physical 1 1 1 Affinity Capture-RNA
CTR9 YOL145C Component of the Paf1p complex involved in transcription elongation physical 1 1 1 Affinity Capture-RNA
SPC19 YDR201W Essential subunit of the Dam1 complex (aka DASH complex) physical 1 1 1 Affinity Capture-RNA
SPC19 YDR201W Essential subunit of the Dam1 complex (aka DASH complex) genetic 1 1 1 Positive Genetic
HSP10 YOR020C Mitochondrial matrix co-chaperonin physical 1 1 1 Affinity Capture-RNA
DPB2 YPR175W Second largest subunit of DNA polymerase II (DNA polymerase epsilon) physical 1 1 1 Affinity Capture-RNA
HOF1 YMR032W F-BAR protein that regulates actin cytoskeleton organization physical 1 1 1 Affinity Capture-RNA
DBF20 YPR111W Ser/Thr kinase involved in late nuclear division physical 1 1 1 Affinity Capture-RNA
OCA1 YNL099C Putative protein tyrosine phosphatase physical 1 1 1 Affinity Capture-RNA
RPN11 YFR004W Metalloprotease subunit of 19S regulatory particle physical 1 1 1 Affinity Capture-RNA
RPN11 YFR004W Metalloprotease subunit of 19S regulatory particle genetic 1 1 1 Negative Genetic
GPM1 YKL152C Tetrameric phosphoglycerate mutase physical 1 1 1 Affinity Capture-RNA
LSM12 YHR121W Protein of unknown function that may function in RNA processing physical 1 1 1 Affinity Capture-RNA
YNL165W YNL165W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RRS1 YOR294W Essential protein that binds ribosomal protein L11 physical 1 1 1 Affinity Capture-RNA
YPR071W YPR071W Putative membrane protein physical 1 1 1 Affinity Capture-RNA
RPC11 YDR045C RNA polymerase III subunit C11 physical 1 1 1 Affinity Capture-RNA
PEX31 YGR004W Peroxisomal integral membrane protein physical 1 1 1 Affinity Capture-RNA
UME1 YPL139C Component of both the Rpd3S and Rpd3L histone deacetylase complexes physical 1 1 1 Affinity Capture-RNA
SNT2 YGL131C Subunit of Snt2C complex, RING finger ubiquitin ligase (E3) physical 1 1 1 Affinity Capture-RNA
HRD1 YOL013C Ubiquitin-protein ligase involved in ER-associated degradation (ERAD) physical 1 1 1 Affinity Capture-RNA
HVG1 YER039C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ILM1 YJR118C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SDO1 YLR022C Guanine nucleotide exchange factor (GEF) for Ria1p physical 1 1 1 Affinity Capture-RNA
RAM1 YDL090C Beta subunit of the CAAX farnesyltransferase (FTase) physical 1 1 1 Affinity Capture-RNA
THP3 YPR045C Protein that may have a role in transcription elongation physical 1 1 1 Affinity Capture-RNA
NUP133 YKR082W Subunit of Nup84p subcomplex of nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
MSB1 YOR188W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
COX15 YER141W Heme a synthase physical 1 1 1 Affinity Capture-RNA
PEX17 YNL214W Membrane peroxin of the peroxisomal importomer complex physical 1 1 1 Affinity Capture-RNA
SEC39 YLR440C Component of the Dsl1p tethering complex physical 1 1 1 Affinity Capture-RNA
SPN1 YPR133C Protein involved in RNA polymerase II transcription physical 1 1 1 Affinity Capture-RNA
SPN1 YPR133C Protein involved in RNA polymerase II transcription genetic 1 1 1 Negative Genetic
TAG1 YLR173W Vacuolar membrane protein involved in termination of autophagy physical 1 1 1 Affinity Capture-RNA
RKM4 YDR257C Ribosomal lysine methyltransferase physical 1 1 1 Affinity Capture-RNA
COQ2 YNR041C Para hydroxybenzoate polyprenyl transferase physical 1 1 1 Affinity Capture-RNA
PAM1 YDR251W Essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
MNP1 YGL068W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
RDL1 YOR285W Thiosulfate sulfurtransferase physical 1 1 1 Affinity Capture-RNA
RRM3 YHR031C DNA helicase involved in rDNA replication and Ty1 transposition physical 1 1 1 Affinity Capture-RNA
RRM3 YHR031C DNA helicase involved in rDNA replication and Ty1 transposition genetic 1 1 1 Synthetic Growth Defect
PEP8 YJL053W Vacuolar protein component of the retromer physical 1 1 1 Affinity Capture-RNA
MDL2 YPL270W Mitochondrial inner membrane half-type ABC transporter physical 1 1 1 Affinity Capture-RNA
CRD1 YDL142C Cardiolipin synthase physical 1 1 1 Affinity Capture-RNA
JEM1 YJL073W DnaJ-like chaperone required for nuclear membrane fusion during mating physical 1 1 1 Affinity Capture-RNA
TOP2 YNL088W Topoisomerase II physical 1 1 1 Affinity Capture-RNA
RSE1 YML049C Protein involved in pre-mRNA splicing physical 1 1 1 Affinity Capture-RNA
CDC123 YLR215C Assembly factor for the eIF2 translation initiation factor complex physical 1 1 1 Affinity Capture-RNA
RPB10 YOR210W RNA polymerase subunit ABC10-beta physical 1 1 1 Affinity Capture-RNA
PAN3 YKL025C Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex physical 1 1 1 Affinity Capture-RNA
PAN3 YKL025C Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex genetic 1 1 1 Synthetic Growth Defect
HRQ1 YDR291W 3'-5' DNA helicase of the conserved RecQ family physical 1 1 1 Affinity Capture-RNA
STS1 YIR011C Protein required for localizing proteasomes to the nucleus physical 1 1 1 Affinity Capture-RNA
NGL1 YOL042W Putative endonuclease physical 1 1 1 Affinity Capture-RNA
HSL7 YBR133C Protein arginine N-methyltransferase physical 1 1 1 Affinity Capture-RNA
TOR1 YJR066W PIK-related protein kinase and rapamycin target physical 1 1 1 Affinity Capture-RNA
TOR1 YJR066W PIK-related protein kinase and rapamycin target genetic 1 1 1 Synthetic Growth Defect
ERP3 YDL018C Protein with similarity to Emp24p and Erv25p physical 1 1 1 Affinity Capture-RNA
MGM101 YJR144W Protein with a role in mitochondrial DNA recombinational repair physical 1 1 1 Affinity Capture-RNA
MGM101 YJR144W Protein with a role in mitochondrial DNA recombinational repair genetic 1 1 1 Synthetic Growth Defect
RDH54 YBR073W DNA-dependent ATPase physical 1 1 1 Affinity Capture-RNA
RDH54 YBR073W DNA-dependent ATPase genetic 1 1 1 Synthetic Growth Defect
RAV2 YDR202C Subunit of RAVE complex (Rav1p, Rav2p, Skp1p) physical 1 1 1 Affinity Capture-RNA
SPP382 YLR424W Essential protein that forms a dimer with Ntr2p physical 1 1 1 Affinity Capture-RNA
KOG1 YHR186C Subunit of TORC1 physical 1 1 1 Affinity Capture-RNA
MET31 YPL038W Zinc-finger DNA-binding transcription factor physical 1 1 1 Affinity Capture-RNA
YGR016W YGR016W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
LDO16 YMR148W Protein of unknown function with possible role in spore wall assembly physical 1 1 1 Affinity Capture-RNA
HSF1 YGL073W Trimeric heat shock transcription factor physical 1 1 1 Affinity Capture-RNA
YIL024C YIL024C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RPB11 YOL005C RNA polymerase II subunit B12.5 physical 1 1 1 Affinity Capture-RNA
SLF1 YDR515W RNA binding protein that associates with polysomes physical 1 1 1 Affinity Capture-RNA
DAL81 YIR023W Positive regulator of genes in multiple nitrogen degradation pathways physical 1 1 1 Affinity Capture-RNA
YPS3 YLR121C Aspartic protease physical 1 1 1 Affinity Capture-RNA
SMD3 YLR147C Core Sm protein Sm D3 physical 1 1 1 Affinity Capture-RNA
THO1 YER063W Conserved nuclear RNA-binding protein physical 1 1 1 Affinity Capture-RNA
OCH1 YGL038C Mannosyltransferase of the cis-Golgi apparatus physical 1 1 1 Affinity Capture-RNA
YCR090C YCR090C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SME1 YOR159C Core Sm protein Sm E physical 1 1 1 Affinity Capture-RNA
FOL2 YGR267C GTP-cyclohydrolase I, catalyzes first step in folic acid biosynthesis physical 1 1 1 Affinity Capture-RNA
CFT2 YLR115W Subunit of the mRNA cleavage and polyadenlylation factor (CPF) physical 1 1 1 Affinity Capture-RNA
RSA3 YLR221C Protein with a likely role in ribosomal maturation physical 1 1 1 Affinity Capture-RNA
YLL032C YLL032C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PPM1 YDR435C Carboxyl methyltransferase physical 1 1 1 Affinity Capture-RNA
IES2 YNL215W Protein that associates with the INO80 chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
PAC11 YDR488C Dynein intermediate chain, microtubule motor protein physical 1 1 1 Affinity Capture-RNA
COY1 YKL179C Golgi membrane protein with similarity to mammalian CASP physical 1 1 1 Affinity Capture-RNA
EXO84 YBR102C Exocyst subunit with dual roles in exocytosis and spliceosome assembly physical 1 1 1 Affinity Capture-RNA
REI1 YBR267W Cytoplasmic pre-60S factor physical 1 1 1 Affinity Capture-RNA
NUP170 YBL079W Subunit of inner ring of nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
YPL199C YPL199C Protein involved in nonstop mRNA decay physical 1 1 1 Affinity Capture-RNA
YSC83 YHR017W Non-essential mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
FMP30 YPL103C Protein with a role in maintaining mitochondrial morphology physical 1 1 1 Affinity Capture-RNA
KAP114 YGL241W Karyopherin, responsible for nuclear import of specific proteins physical 1 1 1 Affinity Capture-RNA
MAK3 YPR051W Catalytic subunit of the NatC type N-terminal acetyltransferase (NAT) physical 1 1 1 Affinity Capture-RNA
TRM11 YOL124C Catalytic subunit of adoMet-dependent tRNA methyltransferase complex physical 1 1 1 Affinity Capture-RNA
TPO3 YPR156C Polyamine transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
GNA1 YFL017C Glucosamine-6-phosphate acetyltransferase physical 1 1 1 Affinity Capture-RNA
GYP5 YPL249C GTPase-activating protein (GAP) for yeast Rab family members physical 1 1 1 Affinity Capture-RNA
POP6 YGR030C Subunit of RNase MRP, nuclear RNase P and telomerase physical 1 1 1 Affinity Capture-RNA
ERS1 YCR075C Protein involved in cystine transport physical 1 1 1 Affinity Capture-RNA
TUF1 YOR187W Mitochondrial translation elongation factor Tu (EF-Tu) physical 1 1 1 Affinity Capture-RNA
DBP8 YHR169W ATPase, putative RNA helicase of the DEAD-box family physical 1 1 1 Affinity Capture-RNA
MRPL20 YKR085C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
YBL028C YBL028C Protein of unknown function that may interact with ribosomes physical 1 1 1 Affinity Capture-RNA
SNQ2 YDR011W Plasma membrane ATP-binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
YBR197C YBR197C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PTH2 YBL057C One of two mitochondrially-localized peptidyl-tRNA hydrolases physical 1 1 1 Affinity Capture-RNA
SMP3 YOR149C Alpha 1,2-mannosyltransferase physical 1 1 1 Affinity Capture-RNA
SMC3 YJL074C Subunit of the multiprotein cohesin complex physical 1 1 1 Affinity Capture-RNA
SMC3 YJL074C Subunit of the multiprotein cohesin complex genetic 1 1 1 Positive Genetic
IML1 YJR138W GTPase-activating protein (GAP) subunit of the Iml1p/SEACIT complex physical 1 1 1 Affinity Capture-RNA
ECM16 YMR128W Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP physical 1 1 1 Affinity Capture-RNA
UBP13 YBL067C Ubiquitin-specific protease that cleaves Ub-protein fusions physical 1 1 1 Affinity Capture-RNA
PXR1 YGR280C Essential protein involved in rRNA and snoRNA maturation physical 1 1 1 Affinity Capture-RNA
GNT1 YOR320C N-acetylglucosaminyltransferase physical 1 1 1 Affinity Capture-RNA
PHO81 YGR233C Cyclin-dependent kinase (CDK) inhibitor physical 1 1 1 Affinity Capture-RNA
HUA1 YGR268C Cytoplasmic protein containing a zinc finger domain physical 1 1 1 Affinity Capture-RNA
MCP1 YOR228C Mitochondrial protein of unknown function involved in lipid homeostas physical 1 1 1 Affinity Capture-RNA
DML1 YMR211W Essential protein involved in mtDNA inheritance physical 1 1 1 Affinity Capture-RNA
ENP1 YBR247C Protein associated with U3 and U14 snoRNAs physical 1 1 1 Affinity Capture-RNA
YGK1 YGL101W 5'-deoxynucleotidase physical 1 1 1 Affinity Capture-RNA
ENV7 YPL236C Vacuolar membrane protein kinase physical 1 1 1 Affinity Capture-RNA
TIM44 YIL022W Essential component of the TIM23 complex physical 1 1 1 Affinity Capture-RNA
VPS70 YJR126C Protein of unknown function involved in vacuolar protein sorting physical 1 1 1 Affinity Capture-RNA
CFT1 YDR301W RNA-binding subunit of the mRNA cleavage and polyadenylation factor physical 1 1 1 Affinity Capture-RNA
RPL41B YDL133C-A Ribosomal 60S subunit protein L41B physical 1 1 1 Affinity Capture-RNA
HEM2 YGL040C Aminolevulinate dehydratase physical 1 1 1 Affinity Capture-RNA
YGR266W YGR266W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
OSH3 YHR073W Member of an oxysterol-binding protein family physical 1 1 1 Affinity Capture-RNA
YGL159W YGL159W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRP4 YHL004W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
HAT1 YPL001W Catalytic subunit of the Hat1p-Hat2p histone acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
MLH3 YPL164C Protein involved in DNA mismatch repair and meiotic recombination physical 1 1 1 Affinity Capture-RNA
CWC23 YGL128C Component of a complex containing Cef1p physical 1 1 1 Affinity Capture-RNA
MPP10 YJR002W Component of the SSU processome and 90S preribosome physical 1 1 1 Affinity Capture-RNA
ECM21 YBL101C Alpha-arrestin, ubiquitin ligase adaptor for Rsp5p physical 1 1 1 Affinity Capture-RNA
ZIM17 YNL310C Protein co-chaperone with a zinc finger motif physical 1 1 1 Affinity Capture-RNA
NUP1 YOR098C FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
EGT2 YNL327W Glycosylphosphatidylinositol (GPI)-anchored cell wall endoglucanase physical 1 1 1 Affinity Capture-RNA
PEX11 YOL147C Peroxisomal protein required for medium-chain fatty acid oxidation physical 1 1 1 Affinity Capture-RNA
VPH2 YKL119C Integral membrane protein required for V-ATPase function physical 1 1 1 Affinity Capture-RNA
YOL075C YOL075C Putative ABC transporter physical 1 1 1 Affinity Capture-RNA
PPM2 YOL141W AdoMet-dependent tRNA methyltransferase physical 1 1 1 Affinity Capture-RNA
MTQ1 YNL063W S-adenosylmethionine-dependent methyltransferase physical 1 1 1 Affinity Capture-RNA
TAF9 YMR236W Subunit (17 kDa) of TFIID and SAGA complexes physical 1 1 1 Affinity Capture-RNA
SAP190 YKR028W Protein that forms a complex with the Sit4p protein phosphatase physical 1 1 1 Affinity Capture-RNA
RSA1 YPL193W Protein involved in the assembly of 60S ribosomal subunits physical 1 1 1 Affinity Capture-RNA
SND2 YLR065C Protein involved in SRP-independent targeting of substrates to the ER physical 1 1 1 Affinity Capture-RNA
EST1 YLR233C TLC1 RNA-associated factor involved in telomere length regulation physical 1 1 1 Affinity Capture-RNA
ECM31 YBR176W Ketopantoate hydroxymethyltransferase physical 1 1 1 Affinity Capture-RNA
CPR7 YJR032W Peptidyl-prolyl cis-trans isomerase (cyclophilin) physical 1 1 1 Affinity Capture-RNA
YMR265C YMR265C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PBI2 YNL015W Cytosolic inhibitor of vacuolar proteinase B (PRB1) physical 1 1 1 Affinity Capture-RNA
RPL41A YDL184C Ribosomal 60S subunit protein L41A physical 1 1 1 Affinity Capture-RNA
YHR127W YHR127W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
CHD1 YER164W Chromatin remodeler that regulates various aspects of transcription physical 1 1 1 Affinity Capture-RNA
RPD3 YNL330C Histone deacetylase, component of both the Rpd3S and Rpd3L complexes physical 1 1 1 Affinity Capture-RNA
PDR16 YNL231C Phosphatidylinositol transfer protein (PITP) physical 1 1 1 Affinity Capture-RNA
ICP55 YER078C Mitochondrial aminopeptidase physical 1 1 1 Affinity Capture-RNA
UBX2 YML013W Bridging factor involved in ER-associated protein degradation (ERAD) physical 1 1 1 Affinity Capture-RNA
RMD1 YDL001W Cytoplasmic protein required for sporulation physical 1 1 1 Affinity Capture-RNA
DDL1 YOR022C DDHD domain-containing phospholipase A1 physical 1 1 1 Affinity Capture-RNA
SYS1 YJL004C Integral membrane protein of the Golgi physical 1 1 1 Affinity Capture-RNA
GEA2 YEL022W Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs) physical 1 1 1 Affinity Capture-RNA
SMF1 YOL122C Divalent metal ion transporter physical 1 1 1 Affinity Capture-RNA
GPI8 YDR331W Catalytic subunit of the ER membrane GPI transamidase complex physical 1 1 1 Affinity Capture-RNA
SDH2 YLL041C Iron-sulfur protein subunit of succinate dehydrogenase physical 1 1 1 Affinity Capture-RNA
SGS1 YMR190C RecQ family nucleolar DNA helicase physical 1 1 1 Affinity Capture-RNA
FCP1 YMR277W Carboxy-terminal domain (CTD) phosphatase physical 1 1 1 Affinity Capture-RNA
FCP1 YMR277W Carboxy-terminal domain (CTD) phosphatase genetic 1 1 1 Negative Genetic
YEH1 YLL012W Steryl ester hydrolase physical 1 1 1 Affinity Capture-RNA
SWP82 YFL049W Member of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
UTR4 YEL038W Protein with sequence similarity to acireductone synthases physical 1 1 1 Affinity Capture-RNA
NUP57 YGR119C FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
NGL2 YMR285C Protein involved in 5.8S rRNA processing physical 1 1 1 Affinity Capture-RNA
YBL086C YBL086C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RTT103 YDR289C Protein involved in transcription termination by RNA polymerase II physical 1 1 1 Affinity Capture-RNA
MIC26 YGR235C Component of the MICOS complex physical 1 1 1 Affinity Capture-RNA
TDP1 YBR223C Tyrosyl-DNA phosphodiesterase I physical 1 1 1 Affinity Capture-RNA
MCM4 YPR019W Essential helicase component of heterohexameric MCM2-7 complexes physical 1 1 1 Affinity Capture-RNA
SSK2 YNR031C MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway physical 1 1 1 Affinity Capture-RNA
GCG1 YER163C Gamma-glutamyl cyclotransferase physical 1 1 1 Affinity Capture-RNA
RNR1 YER070W Major isoform of large subunit of ribonucleotide-diphosphate reductase physical 1 1 1 Affinity Capture-RNA
RNR1 YER070W Major isoform of large subunit of ribonucleotide-diphosphate reductase genetic 1 1 1 Synthetic Lethality
PEX4 YGR133W Peroxisomal ubiquitin conjugating enzyme physical 1 1 1 Affinity Capture-RNA
EFM2 YBR271W S-adenosylmethionine-dependent methyltransferase physical 1 1 1 Affinity Capture-RNA
YRB2 YIL063C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
THO2 YNL139C Subunit of the THO complex physical 1 1 1 Affinity Capture-RNA
MPD2 YOL088C Member of the protein disulfide isomerase (PDI) family physical 1 1 1 Affinity Capture-RNA
PRP6 YBR055C Splicing factor physical 1 1 1 Affinity Capture-RNA
CLA4 YNL298W Cdc42p-activated signal transducing kinase physical 1 1 1 Affinity Capture-RNA
CLA4 YNL298W Cdc42p-activated signal transducing kinase genetic 1 1 1 Synthetic Growth Defect
MRPL49 YJL096W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
COQ1 YBR003W Hexaprenyl pyrophosphate synthetase physical 1 1 1 Affinity Capture-RNA
SEG1 YMR086W Component of eisosome required for proper eisosome assembly physical 1 1 1 Affinity Capture-RNA
NAS2 YIL007C Evolutionarily conserved 19S regulatory particle assembly-chaperone physical 1 1 1 Affinity Capture-RNA
TOG1 YER184C Transcriptional activator of oleate genes physical 1 1 1 Affinity Capture-RNA
SYC1 YOR179C Subunit of the APT subcomplex of cleavage and polyadenylation factor physical 1 1 1 Affinity Capture-RNA
RSC58 YLR033W Component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
ICE2 YIL090W Integral ER membrane protein with type-III transmembrane domains physical 1 1 1 Affinity Capture-RNA
ICE2 YIL090W Integral ER membrane protein with type-III transmembrane domains genetic 1 1 1 Negative Genetic
USO1 YDL058W Essential protein involved in vesicle-mediated ER to Golgi transport physical 1 1 1 Affinity Capture-RNA
RIX7 YLL034C Putative ATPase of the AAA family physical 1 1 1 Affinity Capture-RNA
RRG8 YPR116W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
DUS1 YML080W Dihydrouridine synthase physical 1 1 1 Affinity Capture-RNA
SLP1 YOR154W Glycosylated integral ER membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
MPC2 YHR162W Highly conserved subunit of the mitochondrial pyruvate carrier (MPC) physical 1 1 1 Affinity Capture-RNA
ZTA1 YBR046C NADPH-dependent quinone reductase physical 1 1 1 Affinity Capture-RNA
OAF1 YAL051W Oleate-activated transcription factor physical 1 1 1 Affinity Capture-RNA
RPB4 YJL140W RNA polymerase II subunit B32 physical 1 1 1 Affinity Capture-RNA
NMA2 YGR010W Nicotinic acid mononucleotide adenylyltransferase physical 1 1 1 Affinity Capture-RNA
KTR5 YNL029C Putative mannosyltransferase involved in protein glycosylation physical 1 1 1 Affinity Capture-RNA
CDC15 YAR019C Hippo-like kinase of the Mitotic Exit Network physical 1 1 1 Affinity Capture-RNA
DER1 YBR201W ER membrane protein that promotes export of misfolded polypeptides physical 1 1 1 Affinity Capture-RNA
RAS2 YNL098C GTP-binding protein physical 1 1 1 Affinity Capture-RNA
VPS68 YOL129W Vacuolar membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
KIN3 YAR018C Nonessential serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
RPL38 YLR325C Ribosomal 60S subunit protein L38 physical 1 1 1 Affinity Capture-RNA
FYV8 YGR196C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PAP2 YOL115W Non-canonical poly(A) polymerase physical 1 1 1 Affinity Capture-RNA
ORC1 YML065W Largest subunit of the origin recognition complex physical 1 1 1 Affinity Capture-RNA
TIM18 YOR297C Component of the mitochondrial TIM22 complex physical 1 1 1 Affinity Capture-RNA
ECM2 YBR065C Pre-mRNA splicing factor physical 1 1 1 Affinity Capture-RNA
ECM15 YBL001C Non-essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
DMA2 YNL116W Ubiquitin-protein ligase (E3) physical 1 1 1 Affinity Capture-RNA
SLU7 YDR088C RNA splicing factor physical 1 1 1 Affinity Capture-RNA
SLU7 YDR088C RNA splicing factor genetic 1 1 1 Negative Genetic
LAA1 YJL207C AP-1 accessory protein physical 1 1 1 Affinity Capture-RNA
STE5 YDR103W Pheromone-responsive MAPK scaffold protein physical 1 1 1 Affinity Capture-RNA
SPC72 YAL047C Gamma-tubulin small complex (gamma-TuSC) receptor physical 1 1 1 Affinity Capture-RNA
SNF7 YLR025W One of four subunits of the ESCRT-III complex physical 1 1 1 Affinity Capture-RNA
YIL108W YIL108W Putative metalloendopeptidase physical 1 1 1 Affinity Capture-RNA
LEO1 YOR123C Component of the Paf1 complex physical 1 1 1 Affinity Capture-RNA
OXA1 YER154W Mitochondrial inner membrane insertase physical 1 1 1 Affinity Capture-RNA
YLR257W YLR257W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRPL22 YNL177C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
SRP72 YPL210C Core component of the signal recognition particle (SRP) physical 1 1 1 Affinity Capture-RNA
HHO1 YPL127C Histone H1, linker histone with roles in meiosis and sporulation physical 1 1 1 Affinity Capture-RNA
DBP10 YDL031W Putative ATP-dependent RNA helicase of the DEAD-box protein family physical 1 1 1 Affinity Capture-RNA
NUP100 YKL068W FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
SRN2 YLR119W Component of the ESCRT-I complex physical 1 1 1 Affinity Capture-RNA
YDL124W YDL124W NADPH-dependent alpha-keto amide reductase physical 1 1 1 Affinity Capture-RNA
ENT1 YDL161W Epsin-like protein involved in endocytosis and actin patch assembly physical 1 1 1 Affinity Capture-RNA
RAD24 YER173W Checkpoint protein physical 1 1 1 Affinity Capture-RNA
RAD24 YER173W Checkpoint protein genetic 1 1 1 Negative Genetic
IAH1 YOR126C Isoamyl acetate-hydrolyzing esterase physical 1 1 1 Affinity Capture-RNA
YPT52 YKR014C Endosomal Rab family GTPase physical 1 1 1 Affinity Capture-RNA
TEC1 YBR083W Transcription factor targeting filamentation genes and Ty1 expression physical 1 1 1 Affinity Capture-RNA
TFB4 YPR056W Subunit of TFIIH complex physical 1 1 1 Affinity Capture-RNA
PNG1 YPL096W Conserved peptide N-glycanase physical 1 1 1 Affinity Capture-RNA
TAF7 YMR227C TFIID subunit (67 kDa) physical 1 1 1 Affinity Capture-RNA
VPS17 YOR132W Subunit of the membrane-associated retromer complex physical 1 1 1 Affinity Capture-RNA
SLT2 YHR030C Serine/threonine MAP kinase physical 1 1 1 Affinity Capture-RNA
NPL4 YBR170C Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase physical 1 1 1 Affinity Capture-RNA
ERP6 YGL002W Member of the p24 family involved in ER to Golgi transport physical 1 1 1 Affinity Capture-RNA
FSH2 YMR222C Putative serine hydrolase that localizes to the cytoplasm physical 1 1 1 Affinity Capture-RNA
TRM44 YPL030W tRNA(Ser) Um(44) 2'-O-methyltransferase physical 1 1 1 Affinity Capture-RNA
RBK1 YCR036W Ribokinase, phosphorylates ribose to ribose-5-phosphate physical 1 1 1 Affinity Capture-RNA
CWC22 YGR278W Spliceosome-associated protein that is required for pre-mRNA splicing physical 1 1 1 Affinity Capture-RNA
CWC22 YGR278W Spliceosome-associated protein that is required for pre-mRNA splicing genetic 1 1 1 Negative Genetic
SWI5 YDR146C Transcription factor that recruits Mediator and Swi/Snf complexes physical 1 1 1 Affinity Capture-RNA
UTP11 YKL099C Subunit of U3-containing Small Subunit (SSU) processome complex physical 1 1 1 Affinity Capture-RNA
SMF2 YHR050W Divalent metal ion transporter involved in manganese homeostasis physical 1 1 1 Affinity Capture-RNA
MAG2 YLR427W Cytoplasmic protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRH1 YDR033W Protein that localizes primarily to the plasma membrane physical 1 1 1 Affinity Capture-RNA
HNT1 YDL125C Adenosine 5'-monophosphoramidase physical 1 1 1 Affinity Capture-RNA
CSE2 YNR010W Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
TIP1 YBR067C Major cell wall mannoprotein with possible lipase activity physical 1 1 1 Affinity Capture-RNA
PTA1 YAL043C Subunit of holo-CPF physical 1 1 1 Affinity Capture-RNA
GPB1 YOR371C Multistep regulator of cAMP-PKA signaling physical 1 1 1 Affinity Capture-RNA
MVP1 YMR004W Protein required for sorting proteins to the vacuole physical 1 1 1 Affinity Capture-RNA
SGN1 YIR001C Cytoplasmic RNA-binding protein physical 1 1 1 Affinity Capture-RNA
PEX2 YJL210W RING-finger peroxin and E3 ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
HST2 YPL015C Cytoplasmic NAD(+)-dependent protein deacetylase physical 1 1 1 Affinity Capture-RNA
OMA1 YKR087C Metalloendopeptidase of the mitochondrial inner membrane physical 1 1 1 Affinity Capture-RNA
HSP150 YJL159W O-mannosylated heat shock protein physical 1 1 1 Affinity Capture-RNA
RPS27B YHR021C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
KIN2 YLR096W S/T protein kinase physical 1 1 1 Affinity Capture-RNA
YCL049C YCL049C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
UBP7 YIL156W Ubiquitin-specific protease that cleaves ubiquitin-protein fusions physical 1 1 1 Affinity Capture-RNA
OST2 YOR103C Epsilon subunit of the oligosaccharyltransferase complex physical 1 1 1 Affinity Capture-RNA
TRS23 YDR246W Core component of transport protein particle (TRAPP) complexes I-III physical 1 1 1 Affinity Capture-RNA
TRS23 YDR246W Core component of transport protein particle (TRAPP) complexes I-III genetic 1 1 1 Negative Genetic
TEL1 YBL088C Protein kinase primarily involved in telomere length regulation physical 1 1 1 Affinity Capture-RNA
YBR242W YBR242W 5'-deoxynucleotidase involved in deoxyribonucleoside monophosphate deg physical 1 1 1 Affinity Capture-RNA
YDR131C YDR131C F-box protein subunit of SCF ubiquitin ligase complex physical 1 1 1 Affinity Capture-RNA
CDC53 YDL132W Cullin physical 1 1 1 Affinity Capture-RNA
CTK1 YKL139W Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I) physical 1 1 1 Affinity Capture-RNA
CTK1 YKL139W Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I) genetic 1 1 1 Synthetic Lethality
RGA1 YOR127W GTPase-activating protein for polarity-regulator Cdc42p (RhoGAP) physical 1 1 1 Affinity Capture-RNA
SGO1 YOR073W Component of the spindle checkpoint physical 1 1 1 Affinity Capture-RNA
MET8 YBR213W Bifunctional dehydrogenase and ferrochelatase physical 1 1 1 Affinity Capture-RNA
TIM23 YNR017W Essential component of the TIM23 complex physical 1 1 1 Affinity Capture-RNA
ENT5 YDR153C Protein containing an N-terminal epsin-like domain physical 1 1 1 Affinity Capture-RNA
ECM32 YER176W DNA dependent ATPase/DNA helicase physical 1 1 1 Affinity Capture-RNA
RIA1 YNL163C Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis physical 1 1 1 Affinity Capture-RNA
CPR4 YCR069W Peptidyl-prolyl cis-trans isomerase (cyclophilin) physical 1 1 1 Affinity Capture-RNA
SDH8 YBR269C Protein required for assembly of succinate dehydrogenase physical 1 1 1 Affinity Capture-RNA
FMP52 YER004W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
DSC3 YOR223W Subunit of the DSC ubiquitin ligase complex physical 1 1 1 Affinity Capture-RNA
TAP42 YMR028W Essential protein involved in the TOR signaling pathway physical 1 1 1 Affinity Capture-RNA
PDC2 YDR081C Transcription factor for thiamine-regulated genes physical 1 1 1 Affinity Capture-RNA
REV3 YPL167C Catalytic subunit of DNA polymerase zeta physical 1 1 1 Affinity Capture-RNA
FIS1 YIL065C Protein involved in mitochondrial fission and peroxisome abundance physical 1 1 1 Affinity Capture-RNA
CYR1 YJL005W Adenylate cyclase physical 1 1 1 Affinity Capture-RNA
HIR3 YJR140C Subunit of the HIR complex physical 1 1 1 Affinity Capture-RNA
YMR253C YMR253C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
THI21 YPL258C Hydroxymethylpyrimidine (HMP) and HMP-phosphate kinase physical 1 1 1 Affinity Capture-RNA
DIF1 YLR437C Protein that regulates nuclear import of Rnr2p and Rnr4p physical 1 1 1 Affinity Capture-RNA
DMA1 YHR115C Ubiquitin-protein ligase (E3) physical 1 1 1 Affinity Capture-RNA
LAC1 YKL008C Ceramide synthase component physical 1 1 1 Affinity Capture-RNA
MTF1 YMR228W Mitochondrial RNA polymerase specificity factor physical 1 1 1 Affinity Capture-RNA
CTF3 YLR381W Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p physical 1 1 1 Affinity Capture-RNA
YCH1 YGR203W Phosphatase with sequence similarity to Mih1p physical 1 1 1 Affinity Capture-RNA
YML003W YML003W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
CQD2 YLR253W Mitochondrial protein involved in lipid homeostasis physical 1 1 1 Affinity Capture-RNA
YLR225C YLR225C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SCW4 YGR279C Cell wall protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
SNG1 YGR197C Protein involved in resistance to nitrosoguanidine and 6-azauracil physical 1 1 1 Affinity Capture-RNA
MRS1 YIR021W Splicing protein physical 1 1 1 Affinity Capture-RNA
TGL1 YKL140W Steryl ester hydrolase physical 1 1 1 Affinity Capture-RNA
RPB9 YGL070C RNA polymerase II subunit B12.6 physical 1 1 1 Affinity Capture-RNA
THI3 YDL080C Regulatory protein that binds Pdc2p and Thi2p transcription factors physical 1 1 1 Affinity Capture-RNA
SSL1 YLR005W Subunit of the core form of RNA polymerase transcription factor TFIIH physical 1 1 1 Affinity Capture-RNA
HSH49 YOR319W U2-snRNP associated splicing factor physical 1 1 1 Affinity Capture-RNA
ERV14 YGL054C COPII-coated vesicle protein physical 1 1 1 Affinity Capture-RNA
MED8 YBR193C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
KCC4 YCL024W Protein kinase of the bud neck involved in the septin checkpoint physical 1 1 1 Affinity Capture-RNA
PXL1 YKR090W Protein that localizes to sites of polarized growth physical 1 1 1 Affinity Capture-RNA
SMC2 YFR031C Subunit of the condensin complex physical 1 1 1 Affinity Capture-RNA
MLH1 YMR167W Protein required for mismatch repair in mitosis and meiosis physical 1 1 1 Affinity Capture-RNA
RSC1 YGR056W Component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
FMP27 YLR454W Protein with structural similarity to lipid transport protein Vps13p physical 1 1 1 Affinity Capture-RNA
LSM5 YER146W Lsm (Like Sm) protein physical 1 1 1 Affinity Capture-RNA
PEP4 YPL154C Vacuolar aspartyl protease (proteinase A) physical 1 1 1 Affinity Capture-RNA
RGR1 YLR071C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
TAH11 YJR046W DNA replication licensing factor physical 1 1 1 Affinity Capture-RNA
PSY4 YBL046W Regulatory subunit of protein phosphatase PP4 physical 1 1 1 Affinity Capture-RNA
YMR155W YMR155W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PDC5 YLR134W Minor isoform of pyruvate decarboxylase physical 1 1 1 Affinity Capture-RNA
HO YDL227C Site-specific endonuclease physical 1 1 1 Affinity Capture-RNA
SKN7 YHR206W Nuclear response regulator and transcription factor physical 1 1 1 Affinity Capture-RNA
MMT1 YMR177W Putative metal transporter involved in mitochondrial iron accumulation physical 1 1 1 Affinity Capture-RNA
RRP43 YCR035C Exosome non-catalytic core component physical 1 1 1 Affinity Capture-RNA
COG1 YGL223C Essential component of the conserved oligomeric Golgi complex physical 1 1 1 Affinity Capture-RNA
RAT1 YOR048C Nuclear 5' to 3' single-stranded RNA exonuclease physical 1 1 1 Affinity Capture-RNA
DLT1 YMR126C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RAD26 YJR035W Protein involved in transcription-coupled nucleotide excision repair physical 1 1 1 Affinity Capture-RNA
SHE2 YKL130C RNA-binding protein that binds specific mRNAs and interacts with She3p physical 1 1 1 Affinity Capture-RNA
MPC1 YGL080W Highly conserved subunit of mitochondrial pyruvate carrier (MPC) physical 1 1 1 Affinity Capture-RNA
MOG1 YJR074W Conserved nuclear protein that interacts with GTP-Gsp1p physical 1 1 1 Affinity Capture-RNA
MOG1 YJR074W Conserved nuclear protein that interacts with GTP-Gsp1p genetic 1 1 1 Negative Genetic
MPD1 YOR288C Member of the protein disulfide isomerase (PDI) family physical 1 1 1 Affinity Capture-RNA
PAR32 YDL173W Low complexity protein physical 1 1 1 Affinity Capture-RNA
POP5 YAL033W Subunit of both RNase MRP and nuclear RNase P physical 1 1 1 Affinity Capture-RNA
YGL114W YGL114W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
VPS16 YPL045W Subunit of the HOPS and the CORVET complexes physical 1 1 1 Affinity Capture-RNA
RMI1 YPL024W Subunit of the RecQ (Sgs1p) - Topo III (Top3p) complex physical 1 1 1 Affinity Capture-RNA
YIL067C YIL067C Uncharacterized protein of unknown function physical 1 1 1 Affinity Capture-RNA
MSL5 YLR116W Component of commitment complex physical 1 1 1 Affinity Capture-RNA
KTR7 YIL085C Putative mannosyltransferase involved in protein glycosylation physical 1 1 1 Affinity Capture-RNA
FAD1 YDL045C Flavin adenine dinucleotide (FAD) synthetase physical 1 1 1 Affinity Capture-RNA
POP4 YBR257W Subunit of both RNase MRP and nuclear RNase P physical 1 1 1 Affinity Capture-RNA
WAR1 YML076C Homodimeric Zn2Cys6 zinc finger transcription factor physical 1 1 1 Affinity Capture-RNA
IRC24 YIR036C Putative benzil reductase physical 1 1 1 Affinity Capture-RNA
PRP16 YKR086W DEAH-box RNA helicase physical 1 1 1 Affinity Capture-RNA
LST4 YKL176C Subunit of the Lst4p-Lst7p GTPase activating protein complex for Gtr2p physical 1 1 1 Affinity Capture-RNA
MHR1 YDR296W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
COG4 YPR105C Essential component of the conserved oligomeric Golgi complex physical 1 1 1 Affinity Capture-RNA
COG4 YPR105C Essential component of the conserved oligomeric Golgi complex genetic 1 1 1 Synthetic Rescue
SGF11 YPL047W Integral subunit of SAGA histone acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
SOL1 YNR034W Protein with a possible role in tRNA export physical 1 1 1 Affinity Capture-RNA
PTI1 YGR156W Essential component of CPF (cleavage and polyadenylation factor) physical 1 1 1 Affinity Capture-RNA
SLK19 YOR195W Kinetochore-associated protein physical 1 1 1 Affinity Capture-RNA
SAP155 YFR040W Protein required for function of the Sit4p protein phosphatase physical 1 1 1 Affinity Capture-RNA
SNT1 YCR033W Set3C histone deacetylase scaffold physical 1 1 1 Affinity Capture-RNA
TPK1 YJL164C cAMP-dependent protein kinase catalytic subunit physical 1 1 1 Affinity Capture-RNA
IOC3 YFR013W Subunit of the Isw1a complex physical 1 1 1 Affinity Capture-RNA
HOS2 YGL194C Histone deacetylase and subunit of Set3 and Rpd3L complexes physical 1 1 1 Affinity Capture-RNA
ERG26 YGL001C C-3 sterol dehydrogenase physical 1 1 1 Affinity Capture-RNA
END3 YNL084C EH domain-containing protein involved in endocytosis physical 1 1 1 Affinity Capture-RNA
END3 YNL084C EH domain-containing protein involved in endocytosis genetic 1 1 1 Synthetic Lethality
ESF1 YDR365C Nucleolar protein involved in pre-rRNA processing physical 1 1 1 Affinity Capture-RNA
DBP6 YNR038W Essential protein involved in ribosome biogenesis physical 1 1 1 Affinity Capture-RNA
DSS4 YPR017C Guanine nucleotide dissociation stimulator for Sec4p physical 1 1 1 Affinity Capture-RNA
SCS7 YMR272C Sphingolipid alpha-hydroxylase physical 1 1 1 Affinity Capture-RNA
PFK26 YIL107C 6-phosphofructo-2-kinase physical 1 1 1 Affinity Capture-RNA
SYN8 YAL014C Endosomal SNARE related to mammalian syntaxin 8 physical 1 1 1 Affinity Capture-RNA
NDJ1 YOL104C Protein that regulates meiotic SPB cohesion and telomere clustering physical 1 1 1 Affinity Capture-RNA
UTP9 YHR196W Nucleolar protein physical 1 1 1 Affinity Capture-RNA
RDR1 YOR380W Transcriptional repressor involved in regulating multidrug resistance physical 1 1 1 Affinity Capture-RNA
PLB1 YMR008C Phospholipase B (lysophospholipase) involved in lipid metabolism physical 1 1 1 Affinity Capture-RNA
YPL108W YPL108W Cytoplasmic protein of unknown function physical 1 1 1 Affinity Capture-RNA
RIE1 YGR250C RNA binding protein and negative regulator of START physical 1 1 1 Affinity Capture-RNA
MGR3 YMR115W Subunit of the mitochondrial (mt) i-AAA protease supercomplex physical 1 1 1 Affinity Capture-RNA
MRPL40 YPL173W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
IPL1 YPL209C Aurora kinase of chromosomal passenger complex physical 1 1 1 Affinity Capture-RNA
IPL1 YPL209C Aurora kinase of chromosomal passenger complex genetic 1 1 1 Positive Genetic
MSN2 YMR037C Stress-responsive transcriptional activator physical 1 1 1 Affinity Capture-RNA
SKI3 YPR189W Ski complex component and TPR protein physical 1 1 1 Affinity Capture-RNA
ISW2 YOR304W ATP-dependent DNA translocase involved in chromatin remodeling physical 1 1 1 Affinity Capture-RNA
RLM1 YPL089C MADS-box transcription factor physical 1 1 1 Affinity Capture-RNA
DOM34 YNL001W Protein that facilitates ribosomal subunit dissociation physical 1 1 1 Affinity Capture-RNA
HOG1 YLR113W Mitogen-activated protein kinase involved in osmoregulation physical 1 1 1 Affinity Capture-RNA
NKP2 YLR315W Central kinetochore protein and subunit of the Ctf19 complex physical 1 1 1 Affinity Capture-RNA
MCH4 YOL119C Protein with similarity to mammalian monocarboxylate permeases physical 1 1 1 Affinity Capture-RNA
PEX32 YBR168W Peroxisomal integral membrane protein physical 1 1 1 Affinity Capture-RNA
SNF6 YHL025W Subunit of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
OCA2 YNL056W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
GPP2 YER062C DL-glycerol-3-phosphate phosphatase involved in glycerol biosynthesis physical 1 1 1 Affinity Capture-RNA
YDR415C YDR415C Putative aminopeptidase physical 1 1 1 Affinity Capture-RNA
SLY41 YOR307C Protein involved in ER-to-Golgi transport physical 1 1 1 Affinity Capture-RNA
REH1 YLR387C Cytoplasmic 60S subunit biogenesis factor physical 1 1 1 Affinity Capture-RNA
SRP14 YDL092W Signal recognition particle (SRP) subunit physical 1 1 1 Affinity Capture-RNA
NCR1 YPL006W Vacuolar membrane protein involved with Npc2p in sterol trafficking physical 1 1 1 Affinity Capture-RNA
DSF2 YBR007C Deletion suppressor of mpt5 mutation physical 1 1 1 Affinity Capture-RNA
SDS23 YGL056C Protein involved in cell separation during budding physical 1 1 1 Affinity Capture-RNA
TIR3 YIL011W Cell wall mannoprotein physical 1 1 1 Affinity Capture-RNA
KIN28 YDL108W Ser/Thr protein kinase and subunit of TFIIK, a TFIIH subassembly physical 1 1 1 Affinity Capture-RNA
RPF1 YHR088W Protein involved in assembly and export of the large ribosomal subunit physical 1 1 1 Affinity Capture-RNA
UBC7 YMR022W Ubiquitin conjugating enzyme physical 1 1 1 Affinity Capture-RNA
NUD1 YOR373W Mitotic exit network (MEN) scaffold protein physical 1 1 1 Affinity Capture-RNA
STB6 YKL072W Protein that binds Sin3p in a two-hybrid assay physical 1 1 1 Affinity Capture-RNA
FDO1 YMR144W Protein involved in directionality of mating type switching physical 1 1 1 Affinity Capture-RNA
PYC1 YGL062W Pyruvate carboxylase isoform physical 1 1 1 Affinity Capture-RNA
CLB6 YGR109C B-type cyclin involved in DNA replication during S phase physical 1 1 1 Affinity Capture-RNA
UTR1 YJR049C ATP-NADH kinase physical 1 1 1 Affinity Capture-RNA
PLN1 YKR046C Perilipin, involved in formation and stability of lipid droplets physical 1 1 1 Affinity Capture-RNA
THP1 YOL072W Nuclear pore-associated protein physical 1 1 1 Affinity Capture-RNA
KTI12 YKL110C Protein that plays a role in modification of tRNA wobble nucleosides physical 1 1 1 Affinity Capture-RNA
GID7 YCL039W Subunit of GID Complex that binds directly to central component Vid30p physical 1 1 1 Affinity Capture-RNA
UBA3 YPR066W Protein that activates Rub1p (NEDD8) before neddylation physical 1 1 1 Affinity Capture-RNA
SEC3 YER008C Subunit of the exocyst complex physical 1 1 1 Affinity Capture-RNA
PTC3 YBL056W Type 2C protein phosphatase (PP2C) physical 1 1 1 Affinity Capture-RNA
YHR138C YHR138C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
FMP10 YER182W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SPC34 YKR037C Essential subunit of the Dam1 complex (aka DASH complex) physical 1 1 1 Affinity Capture-RNA
SPC24 YMR117C Component of the kinetochore-associated Ndc80 complex physical 1 1 1 Affinity Capture-RNA
HRT1 YOL133W RING-H2 domain core subunit of multiple ubiquitin ligase complexes physical 1 1 1 Affinity Capture-RNA
CTK3 YML112W Gamma subunit of C-terminal domain kinase I physical 1 1 1 Affinity Capture-RNA
YCS4 YLR272C Subunit of the condensin complex physical 1 1 1 Affinity Capture-RNA
RAD6 YGL058W Ubiquitin-conjugating enzyme (E2) physical 1 1 1 Affinity Capture-RNA
RAD6 YGL058W Ubiquitin-conjugating enzyme (E2) genetic 1 1 1 Synthetic Lethality
SYF2 YGR129W Member of the NineTeen Complex (NTC) physical 1 1 1 Affinity Capture-RNA
GPI15 YNL038W Protein involved in the synthesis of GlcNAc-PI physical 1 1 1 Affinity Capture-RNA
DDI1 YER143W Aspartic-type endopeptidase physical 1 1 1 Affinity Capture-RNA
RLP24 YLR009W Essential protein required for ribosomal large subunit biogenesis physical 1 1 1 Affinity Capture-RNA
VPS8 YAL002W Membrane-binding component of the CORVET complex physical 1 1 1 Affinity Capture-RNA
SGF29 YCL010C Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes physical 1 1 1 Affinity Capture-RNA
CIN5 YOR028C Basic leucine zipper (bZIP) transcription factor of the yAP-1 family physical 1 1 1 Affinity Capture-RNA
SPC97 YHR172W Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex physical 1 1 1 Affinity Capture-RNA
YRB30 YGL164C RanGTP-binding protein physical 1 1 1 Affinity Capture-RNA
MSN5 YDR335W Karyopherin physical 1 1 1 Affinity Capture-RNA
INH1 YDL181W Protein that inhibits ATP hydrolysis by the F1F0-ATP synthase physical 1 1 1 Affinity Capture-RNA
RME1 YGR044C Zinc finger protein involved in control of meiosis physical 1 1 1 Affinity Capture-RNA
QDR3 YBR043C Multidrug transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
TRL1 YJL087C tRNA ligase physical 1 1 1 Affinity Capture-RNA
PEP12 YOR036W Target membrane receptor (t-SNARE) physical 1 1 1 Affinity Capture-RNA
SLD5 YDR489W Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) physical 1 1 1 Affinity Capture-RNA
SLD5 YDR489W Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) genetic 1 1 1 Negative Genetic
MET18 YIL128W Component of cytosolic iron-sulfur protein assembly (CIA) machinery physical 1 1 1 Affinity Capture-RNA
MMR1 YLR190W Phosphorylated protein of the mitochondrial outer membrane physical 1 1 1 Affinity Capture-RNA
MON2 YNL297C Protein with a role in endocytosis and vacuole integrity physical 1 1 1 Affinity Capture-RNA
MON2 YNL297C Protein with a role in endocytosis and vacuole integrity genetic 1 1 1 Synthetic Lethality
CDC13 YDL220C Single stranded DNA-binding protein found at TG1-3 telomere G-tails physical 1 1 1 Affinity Capture-RNA
SUR1 YPL057C Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit physical 1 1 1 Affinity Capture-RNA
YJR098C YJR098C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RRP7 YCL031C Essential protein involved in rRNA processing and ribosome biogenesis physical 1 1 1 Affinity Capture-RNA
EAF1 YDR359C Component of the NuA4 histone acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
EAF1 YDR359C Component of the NuA4 histone acetyltransferase complex genetic 1 1 1 Synthetic Lethality
ERT1 YBR239C Transcriptional regulator physical 1 1 1 Affinity Capture-RNA
MSB2 YGR014W Mucin family member involved in various signaling pathways physical 1 1 1 Affinity Capture-RNA
CMP2 YML057W Calcineurin A physical 1 1 1 Affinity Capture-RNA
SEC22 YLR268W R-SNARE protein physical 1 1 1 Affinity Capture-RNA
CDC31 YOR257W Calcium-binding component of the spindle pole body (SPB) half-bridge physical 1 1 1 Affinity Capture-RNA
KXD1 YGL079W Subunit of the BLOC-1 complex involved in endosomal maturation physical 1 1 1 Affinity Capture-RNA
SNU114 YKL173W GTPase component of U5 snRNP involved in mRNA splicing via spliceosome physical 1 1 1 Affinity Capture-RNA
SNU114 YKL173W GTPase component of U5 snRNP involved in mRNA splicing via spliceosome genetic 1 1 1 Negative Genetic
UIP5 YKR044W Protein of unknown function that interacts with Ulp1p physical 1 1 1 Affinity Capture-RNA
SIR2 YDL042C Conserved NAD+ dependent histone deacetylase of the Sirtuin family physical 1 1 1 Affinity Capture-RNA
ROY1 YMR258C GTPase inhibitor with similarity to F-box proteins physical 1 1 1 Affinity Capture-RNA
PRM9 YAR031W Pheromone-regulated protein physical 1 1 1 Affinity Capture-RNA
YHL026C YHL026C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
VPS53 YJL029C Component of the GARP (Golgi-associated retrograde protein) complex physical 1 1 1 Affinity Capture-RNA
VPS53 YJL029C Component of the GARP (Golgi-associated retrograde protein) complex genetic 1 1 1 Synthetic Lethality
IMP21 YIL154C Transcriptional activator involved in maintenance of ion homeostasis physical 1 1 1 Affinity Capture-RNA
SPB4 YFL002C Putative ATP-dependent RNA helicase physical 1 1 1 Affinity Capture-RNA
SWM1 YDR260C Subunit of the anaphase-promoting complex (APC) physical 1 1 1 Affinity Capture-RNA
MIC27 YNL100W Component of the MICOS complex physical 1 1 1 Affinity Capture-RNA
RML2 YEL050C Mitochondrial ribosomal protein of the large subunit (L2) physical 1 1 1 Affinity Capture-RNA
TOM7 YNL070W Component of the TOM (translocase of outer membrane) complex physical 1 1 1 Affinity Capture-RNA
CTS1 YLR286C Endochitinase physical 1 1 1 Affinity Capture-RNA
CDC8 YJR057W Nucleoside monophosphate and nucleoside diphosphate kinase physical 1 1 1 Affinity Capture-RNA
SRB5 YGR104C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
SRB5 YGR104C Subunit of the RNA polymerase II mediator complex genetic 1 1 1 Synthetic Lethality
YOR131C YOR131C Putative haloacid dehalogenase-like hydrolase physical 1 1 1 Affinity Capture-RNA
TMS1 YDR105C Vacuolar membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
CTF19 YPL018W Outer kinetochore protein, needed for accurate chromosome segregation physical 1 1 1 Affinity Capture-RNA
STB3 YDR169C Ribosomal RNA processing element (RRPE)-binding protein physical 1 1 1 Affinity Capture-RNA
IES5 YER092W Non-essential INO80 chromatin remodeling complex subunit physical 1 1 1 Affinity Capture-RNA
MEP1 YGR121C Ammonium permease physical 1 1 1 Affinity Capture-RNA
CUP9 YPL177C Homeodomain-containing transcriptional repressor physical 1 1 1 Affinity Capture-RNA
SSU1 YPL092W Plasma membrane sulfite pump involved in sulfite metabolism physical 1 1 1 Affinity Capture-RNA
SHQ1 YIL104C Chaperone protein physical 1 1 1 Affinity Capture-RNA
STR2 YJR130C Cystathionine gamma-synthase, converts cysteine into cystathionine physical 1 1 1 Affinity Capture-RNA
TOM6 YOR045W Component of the TOM (translocase of outer membrane) complex physical 1 1 1 Affinity Capture-RNA
TPS2 YDR074W Phosphatase subunit of the trehalose-6-P synthase/phosphatase complex physical 1 1 1 Affinity Capture-RNA
UCC1 YLR224W F-box protein and component of SCF ubiquitin ligase complexes physical 1 1 1 Affinity Capture-RNA
TIM21 YGR033C Nonessential component of the TIM23 complex physical 1 1 1 Affinity Capture-RNA
PUS1 YPL212C tRNA:pseudouridine synthase physical 1 1 1 Affinity Capture-RNA
MAL13 YGR288W MAL-activator protein physical 1 1 1 Affinity Capture-RNA
YCG1 YDR325W Subunit of the condensin complex physical 1 1 1 Affinity Capture-RNA
TRS20 YBR254C Core component of transport protein particle (TRAPP) complexes I-III physical 1 1 1 Affinity Capture-RNA
TRS20 YBR254C Core component of transport protein particle (TRAPP) complexes I-III genetic 1 1 1 Negative Genetic
LSM1 YJL124C Lsm (Like Sm) protein physical 1 1 1 Affinity Capture-RNA
LSM6 YDR378C Lsm (Like Sm) protein physical 1 1 1 Affinity Capture-RNA
LSM6 YDR378C Lsm (Like Sm) protein genetic 1 1 1 Synthetic Lethality
YJR096W YJR096W Xylose and arabinose reductase physical 1 1 1 Affinity Capture-RNA
SCO2 YBR024W Protein anchored to mitochondrial inner membrane physical 1 1 1 Affinity Capture-RNA
MLC2 YPR188C Regulatory light chain for the type II myosin Myo1p physical 1 1 1 Affinity Capture-RNA
MIC60 YKR016W Component of the MICOS complex physical 1 1 1 Affinity Capture-RNA
STP1 YDR463W Transcription factor physical 1 1 1 Affinity Capture-RNA
MSM1 YGR171C Mitochondrial methionyl-tRNA synthetase (MetRS) physical 1 1 1 Affinity Capture-RNA
ITC1 YGL133W Subunit of ATP-dependent Isw2p-Itc1p chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
FAP1 YNL023C Protein that binds to Fpr1p physical 1 1 1 Affinity Capture-RNA
TAT2 YOL020W High affinity tryptophan and tyrosine permease physical 1 1 1 Affinity Capture-RNA
PFA5 YDR459C Palmitoyltransferase with autoacylation activity physical 1 1 1 Affinity Capture-RNA
MRPL35 YDR322W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
SYG1 YIL047C Plasma membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
GAL1 YBR020W Galactokinase physical 1 1 1 Affinity Capture-RNA
COQ3 YOL096C O-methyltransferase physical 1 1 1 Affinity Capture-RNA
MGR1 YCL044C Subunit of the mitochondrial (mt) i-AAA protease supercomplex physical 1 1 1 Affinity Capture-RNA
IRC8 YJL051W Bud tip localized protein of unknown function physical 1 1 1 Affinity Capture-RNA
MSS18 YPR134W Nuclear encoded protein needed for splicing of mitochondrial intron physical 1 1 1 Affinity Capture-RNA
RGP1 YDR137W Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p) physical 1 1 1 Affinity Capture-RNA
SET1 YHR119W Histone methyltransferase, subunit of the COMPASS (Set1C) complex physical 1 1 1 Affinity Capture-RNA
SAS4 YDR181C Subunit of the SAS complex (Sas2p, Sas4p, Sas5p) physical 1 1 1 Affinity Capture-RNA
MAK16 YAL025C Essential nuclear protein physical 1 1 1 Affinity Capture-RNA
INN1 YNL152W Essential protein that associates with contractile actomyosin ring physical 1 1 1 Affinity Capture-RNA
RAD16 YBR114W Nucleotide excision repair (NER) protein physical 1 1 1 Affinity Capture-RNA
YLR001C YLR001C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YTH1 YPR107C Essential RNA-binding component of cleavage and polyadenylation factor physical 1 1 1 Affinity Capture-RNA
PRP18 YGR006W Splicing factor and component of snRNP U5 physical 1 1 1 Affinity Capture-RNA
PRP18 YGR006W Splicing factor and component of snRNP U5 genetic 1 1 1 Negative Genetic
NDE1 YMR145C Mitochondrial external NADH dehydrogenase physical 1 1 1 Affinity Capture-RNA
TSC11 YER093C Subunit of TORC2 (Tor2p-Lst8p-Avo1-Avo2-Tsc11p-Bit61p) physical 1 1 1 Affinity Capture-RNA
MSS1 YMR023C Mitochondrial protein physical 1 1 1 Affinity Capture-RNA
IRE1 YHR079C Serine-threonine kinase and endoribonuclease physical 1 1 1 Affinity Capture-RNA
SEC6 YIL068C Essential 88kDa subunit of the exocyst complex physical 1 1 1 Affinity Capture-RNA
UBP10 YNL186W Ubiquitin-specific protease, deubiquitinates Ub-protein moieties physical 1 1 1 Affinity Capture-RNA
PBS2 YJL128C MAP kinase kinase of the HOG signaling pathway physical 1 1 1 Affinity Capture-RNA
HSE1 YHL002W Subunit of the endosomal Vps27p-Hse1p complex physical 1 1 1 Affinity Capture-RNA
FAF1 YIL019W Protein required for pre-rRNA processing physical 1 1 1 Affinity Capture-RNA
RIM2 YBR192W Mitochondrial pyrimidine nucleotide transporter physical 1 1 1 Affinity Capture-RNA
YJR142W YJR142W 8-oxo-dGTP diphosphatase of the Nudix hydrolase family physical 1 1 1 Affinity Capture-RNA
SLA2 YNL243W Adaptor protein that links actin to clathrin and endocytosis physical 1 1 1 Affinity Capture-RNA
VAM7 YGL212W Vacuolar SNARE protein physical 1 1 1 Affinity Capture-RNA
TGL5 YOR081C Bifunctional triacylglycerol lipase and LPA acyltransferase physical 1 1 1 Affinity Capture-RNA
GTR1 YML121W Subunit of a TORC1-stimulating GTPase and the EGO/GSE complex physical 1 1 1 Affinity Capture-RNA
DGK1 YOR311C Diacylglycerol kinase physical 1 1 1 Affinity Capture-RNA
OPI3 YJR073C Methylene-fatty-acyl-phospholipid synthase physical 1 1 1 Affinity Capture-RNA
YDL012C YDL012C Tail-anchored plasma membrane protein with a conserved CYSTM module physical 1 1 1 Affinity Capture-RNA
CHL1 YPL008W Probable DNA helicase physical 1 1 1 Affinity Capture-RNA
RRI2 YOL117W Subunit of the COP9 signalosome (CSN) complex physical 1 1 1 Affinity Capture-RNA
LSB6 YJL100W Type II phosphatidylinositol 4-kinase physical 1 1 1 Affinity Capture-RNA
SIC1 YLR079W Cyclin-dependent kinase inhibitor (CKI) physical 1 1 1 Affinity Capture-RNA
SIC1 YLR079W Cyclin-dependent kinase inhibitor (CKI) genetic 1 1 1 Synthetic Lethality
GYL1 YMR192W Putative GTPase activating protein (GAP) with a role in exocytosis physical 1 1 1 Affinity Capture-RNA
PHA2 YNL316C Prephenate dehydratase physical 1 1 1 Affinity Capture-RNA
RFU1 YLR073C Protein that inhibits Doa4p deubiquitinating activity physical 1 1 1 Affinity Capture-RNA
PHO2 YDL106C Homeobox transcription factor physical 1 1 1 Affinity Capture-RNA
GIR2 YDR152W Highly-acidic RWD domain-containing cytoplasmic protein physical 1 1 1 Affinity Capture-RNA
YOR1 YGR281W Plasma membrane ATP-binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
ENT2 YLR206W Epsin-like protein required for endocytosis and actin patch assembly physical 1 1 1 Affinity Capture-RNA
MAL33 YBR297W MAL-activator protein physical 1 1 1 Affinity Capture-RNA
HPC2 YBR215W Subunit of the HIR complex physical 1 1 1 Affinity Capture-RNA
RSM25 YIL093C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
PAP1 YKR002W Poly(A) polymerase physical 1 1 1 Affinity Capture-RNA
THI7 YLR237W Plasma membrane transporter responsible for the uptake of thiamine physical 1 1 1 Affinity Capture-RNA
NOP8 YOL144W Nucleolar protein required for 60S ribosomal subunit biogenesis physical 1 1 1 Affinity Capture-RNA
PMD1 YER132C Protein with an N-terminal kelch-like domain physical 1 1 1 Affinity Capture-RNA
YME2 YMR302C Integral inner mitochondrial membrane protein physical 1 1 1 Affinity Capture-RNA
LAM5 YFL042C Putative sterol transfer protein physical 1 1 1 Affinity Capture-RNA
DIG2 YDR480W MAP kinase-responsive inhibitor of the Ste12p transcription factor physical 1 1 1 Affinity Capture-RNA
CLB2 YPR119W B-type cyclin involved in cell cycle progression physical 1 1 1 Affinity Capture-RNA
CLB2 YPR119W B-type cyclin involved in cell cycle progression genetic 1 1 1 Dosage Lethality
CDC34 YDR054C Ubiquitin-conjugating enzyme (E2) physical 1 1 1 Affinity Capture-RNA
CDC34 YDR054C Ubiquitin-conjugating enzyme (E2) genetic 1 1 1 Negative Genetic
MIC19 YFR011C Component of the MICOS complex physical 1 1 1 Affinity Capture-RNA
PRI1 YIR008C Subunit of DNA primase physical 1 1 1 Affinity Capture-RNA
PRI1 YIR008C Subunit of DNA primase genetic 1 1 1 Synthetic Growth Defect
COQ9 YLR201C Protein required for ubiquinone biosynthesis and respiratory growth physical 1 1 1 Affinity Capture-RNA
RIM20 YOR275C Protein involved in proteolytic activation of Rim101p physical 1 1 1 Affinity Capture-RNA
LAM4 YHR080C Sterol-binding protein that localizes to puncta in the cortical ER physical 1 1 1 Affinity Capture-RNA
TRS120 YDR407C Component of transport protein particle (TRAPP) complex II physical 1 1 1 Affinity Capture-RNA
MRP35 YNL122C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
CIN10 YDR387C Putative transporter physical 1 1 1 Affinity Capture-RNA
TGS1 YPL157W Trimethyl guanosine synthase, conserved nucleolar methyl transferase physical 1 1 1 Affinity Capture-RNA
TGS1 YPL157W Trimethyl guanosine synthase, conserved nucleolar methyl transferase genetic 1 1 1 Negative Genetic
MMM1 YLL006W ER integral membrane protein, ERMES complex subunit physical 1 1 1 Affinity Capture-RNA
SPT14 YPL175W UDP-glycosyltransferase subunit of the GPI-GnT complex physical 1 1 1 Affinity Capture-RNA
MEH1 YKR007W Subunit of the EGO/GSE complex physical 1 1 1 Affinity Capture-RNA
CTF18 YMR078C Subunit of a complex with Ctf8p physical 1 1 1 Affinity Capture-RNA
SYF1 YDR416W Member of the NineTeen Complex (NTC) physical 1 1 1 Affinity Capture-RNA
SYF1 YDR416W Member of the NineTeen Complex (NTC) genetic 1 1 1 Negative Genetic
SAM50 YNL026W Component of the Sorting and Assembly Machinery (SAM) complex physical 1 1 1 Affinity Capture-RNA
MRM1 YOR201C Ribose methyltransferase physical 1 1 1 Affinity Capture-RNA
YNL011C YNL011C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
FLC1 YPL221W Flavin adenine dinucleotide transporter physical 1 1 1 Affinity Capture-RNA
GUT1 YHL032C Glycerol kinase physical 1 1 1 Affinity Capture-RNA
TPS3 YMR261C Regulatory subunit of trehalose-6-phosphate synthase/phosphatase physical 1 1 1 Affinity Capture-RNA
RCK2 YLR248W Protein kinase involved in response to oxidative and osmotic stress physical 1 1 1 Affinity Capture-RNA
MET3 YJR010W ATP sulfurylase physical 1 1 1 Affinity Capture-RNA
RGD2 YFL047W GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p physical 1 1 1 Affinity Capture-RNA
CSC1 YLR241W Calcium permeable gated cation channel physical 1 1 1 Affinity Capture-RNA
CYT1 YOR065W Cytochrome c1 physical 1 1 1 Affinity Capture-RNA
INP53 YOR109W Polyphosphatidylinositol phosphatase physical 1 1 1 Affinity Capture-RNA
SHU1 YHL006C Component of Shu complex (aka PCSS complex) physical 1 1 1 Affinity Capture-RNA
FLX1 YIL134W Mitochondrial flavin adenine dinucleotide transporter physical 1 1 1 Affinity Capture-RNA
DCN1 YLR128W Scaffold-type E3 ligase physical 1 1 1 Affinity Capture-RNA
GAB1 YLR459W Subunit of the glycosylphosphatidylinositol transamidase complex physical 1 1 1 Affinity Capture-RNA
CIR1 YGR207C Mitochondrial protein that interacts with frataxin (Yfh1p) physical 1 1 1 Affinity Capture-RNA
TOA2 YKL058W TFIIA small subunit physical 1 1 1 Affinity Capture-RNA
PUP3 YER094C Beta 3 subunit of the 20S proteasome physical 1 1 1 Affinity Capture-RNA
PUP3 YER094C Beta 3 subunit of the 20S proteasome genetic 1 1 1 Positive Genetic
HDA3 YPR179C Subunit of HDA1 histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
EFR3 YMR212C Protein required for Stt4-containing PI kinase complex localization physical 1 1 1 Affinity Capture-RNA
COX5A YNL052W Subunit Va of cytochrome c oxidase physical 1 1 1 Affinity Capture-RNA
PET8 YNL003C S-adenosylmethionine transporter of the mitochondrial inner membrane physical 1 1 1 Affinity Capture-RNA
YPK3 YBR028C AGC kinase physical 1 1 1 Affinity Capture-RNA
SOF1 YLL011W Protein required for biogenesis of 40S (small) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
MNN14 YJR061W Protein required for N-glycan mannosylphosphorylation physical 1 1 1 Affinity Capture-RNA
FAP7 YDL166C Essential NTPase required for small ribosome subunit synthesis physical 1 1 1 Affinity Capture-RNA
KRI1 YNL308C Essential nucleolar protein required for 40S ribosome biogenesis physical 1 1 1 Affinity Capture-RNA
VPS33 YLR396C ATP-binding protein that is a subunit of the HOPS and CORVET complexes physical 1 1 1 Affinity Capture-RNA
VPS33 YLR396C ATP-binding protein that is a subunit of the HOPS and CORVET complexes genetic 1 1 1 Synthetic Lethality
NUP42 YDR192C FG-nucleoporin component of central core of the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
PAL1 YDR348C Protein of unknown function thought to be involved in endocytosis physical 1 1 1 Affinity Capture-RNA
MSS51 YLR203C Specific translational activator for the mitochondrial COX1 mRNA physical 1 1 1 Affinity Capture-RNA
DBP7 YKR024C Putative ATP-dependent RNA helicase of the DEAD-box family physical 1 1 1 Affinity Capture-RNA
OCT1 YKL134C Mitochondrial intermediate peptidase physical 1 1 1 Affinity Capture-RNA
YSP2 YDR326C Sterol-binding protein physical 1 1 1 Affinity Capture-RNA
OPI10 YOL032W Protein with a possible role in phospholipid biosynthesis physical 1 1 1 Affinity Capture-RNA
SPC105 YGL093W Subunit of a kinetochore-microtubule binding complex physical 1 1 1 Affinity Capture-RNA
EMP65 YER140W Integral membrane protein of the ER physical 1 1 1 Affinity Capture-RNA
SAF1 YBR280C F-Box protein involved in proteasome-dependent degradation of Aah1p physical 1 1 1 Affinity Capture-RNA
YMR187C YMR187C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRM2 YGL136C Mitochondrial 2' O-ribose methyltransferase physical 1 1 1 Affinity Capture-RNA
MPS3 YJL019W Nuclear envelope protein physical 1 1 1 Affinity Capture-RNA
SCC4 YER147C Subunit of cohesin loading factor (Scc2p-Scc4p) physical 1 1 1 Affinity Capture-RNA
UTP30 YKR060W Subunit of U3-containing 90S preribosome complex physical 1 1 1 Affinity Capture-RNA
RCM1 YNL022C rRNA m5C methyltransferase physical 1 1 1 Affinity Capture-RNA
MIX17 YMR002W Mitochondrial intermembrane space protein physical 1 1 1 Affinity Capture-RNA
SDC1 YDR469W Subunit of the COMPASS (Set1C) complex physical 1 1 1 Affinity Capture-RNA
YFH1 YDL120W Mitochondrial matrix iron chaperone physical 1 1 1 Affinity Capture-RNA
THI6 YPL214C Thiamine-phosphate diphosphorylase and hydroxyethylthiazole kinase physical 1 1 1 Affinity Capture-RNA
ULP1 YPL020C Protease that specifically cleaves Smt3p protein conjugates physical 1 1 1 Affinity Capture-RNA
ULP1 YPL020C Protease that specifically cleaves Smt3p protein conjugates genetic 1 1 1 Negative Genetic
RTC1 YOL138C Subunit of SEACAT, a subcomplex of the SEA complex physical 1 1 1 Affinity Capture-RNA
YPT10 YBR264C Rab family GTP-binding protein physical 1 1 1 Affinity Capture-RNA
EAT1 YGR015C Ethanol acetyltransferase physical 1 1 1 Affinity Capture-RNA
NRG2 YBR066C Transcriptional repressor physical 1 1 1 Affinity Capture-RNA
NRG2 YBR066C Transcriptional repressor genetic 1 1 1 Phenotypic Suppression
SIN3 YOL004W Component of both the Rpd3S and Rpd3L histone deacetylase complexes physical 1 1 1 Affinity Capture-RNA
PPN2 YNL217W Zn2+-dependent endopolyphosphatase physical 1 1 1 Affinity Capture-RNA
ESP1 YGR098C Separase/separin, a caspase-like cysteine protease physical 1 1 1 Affinity Capture-RNA
TFB3 YDR460W Subunit of TFIIH and nucleotide excision repair factor 3 complexes physical 1 1 1 Affinity Capture-RNA
YPL229W YPL229W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
TAF5 YBR198C Subunit (90 kDa) of TFIID and SAGA complexes physical 1 1 1 Affinity Capture-RNA
MEC1 YBR136W Genome integrity checkpoint protein and PI kinase superfamily member physical 1 1 1 Affinity Capture-RNA
MEC1 YBR136W Genome integrity checkpoint protein and PI kinase superfamily member genetic 1 1 1 Synthetic Lethality
TFA2 YKR062W TFIIE small subunit physical 1 1 1 Affinity Capture-RNA
YPR127W YPR127W Putative pyridoxine 4-dehydrogenase physical 1 1 1 Affinity Capture-RNA
MID2 YLR332W O-glycosylated plasma membrane protein physical 1 1 1 Affinity Capture-RNA
YAP1801 YHR161C Protein of the AP180 family, involved in clathrin cage assembly physical 1 1 1 Affinity Capture-RNA
YNL040W YNL040W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SBE22 YHR103W Protein involved in bud growth physical 1 1 1 Affinity Capture-RNA
PEX1 YKL197C AAA-peroxin physical 1 1 1 Affinity Capture-RNA
RNA14 YMR061W Component of the cleavage and polyadenylation factor I (CF I) physical 1 1 1 Affinity Capture-RNA
MRP51 YPL118W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
SIR1 YKR101W Protein involved in silencing at mating-type loci HML and HMR physical 1 1 1 Affinity Capture-RNA
MRH4 YGL064C Mitochondrial ATP-dependent RNA helicase of the DEAD-box family physical 1 1 1 Affinity Capture-RNA
STU1 YBL034C Microtubule plus-end-tracking non-motor protein physical 1 1 1 Affinity Capture-RNA
STU1 YBL034C Microtubule plus-end-tracking non-motor protein genetic 1 1 1 Negative Genetic
YOL014W YOL014W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
TAD3 YLR316C Subunit of tRNA-specific adenosine-34 deaminase physical 1 1 1 Affinity Capture-RNA
PRP9 YDL030W Subunit of the SF3a splicing factor complex physical 1 1 1 Affinity Capture-RNA
GPN3 YLR243W Putative GTPase with a role in biogenesis of RNA pol II and polIII physical 1 1 1 Affinity Capture-RNA
SED5 YLR026C cis-Golgi t-SNARE syntaxin physical 1 1 1 Affinity Capture-RNA
MHP1 YJL042W Microtubule-associated protein involved in microtubule organization physical 1 1 1 Affinity Capture-RNA
YOP1 YPR028W Reticulon-interacting protein physical 1 1 1 Affinity Capture-RNA
TDA7 YNL176C Cell cycle-regulated gene of unknown function physical 1 1 1 Affinity Capture-RNA
YGK3 YOL128C Protein kinase related to mammalian GSK-3 glycogen synthase kinases physical 1 1 1 Affinity Capture-RNA
DOT1 YDR440W Nucleosomal histone H3-Lys79 methylase physical 1 1 1 Affinity Capture-RNA
YGR283C YGR283C Putative methyltransferase physical 1 1 1 Affinity Capture-RNA
SWR1 YDR334W Swi2/Snf2-related ATPase physical 1 1 1 Affinity Capture-RNA
DEG1 YFL001W tRNA:pseudouridine synthase physical 1 1 1 Affinity Capture-RNA
MFA2 YNL145W Mating pheromone a-factor physical 1 1 1 Affinity Capture-RNA
LUC7 YDL087C Essential protein associated with the U1 snRNP complex physical 1 1 1 Affinity Capture-RNA
LUC7 YDL087C Essential protein associated with the U1 snRNP complex genetic 1 1 1 Negative Genetic
MEP2 YNL142W Ammonium permease involved in regulation of pseudohyphal growth physical 1 1 1 Affinity Capture-RNA
GRX6 YDL010W Cis-Golgi localized monothiol glutaredoxin, binds Fe-S cluster physical 1 1 1 Affinity Capture-RNA
YDR338C YDR338C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
UBP11 YKR098C Ubiquitin-specific protease physical 1 1 1 Affinity Capture-RNA
MRPL6 YHR147C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
DAD2 YKR083C Essential subunit of the Dam1 complex (aka DASH complex) physical 1 1 1 Affinity Capture-RNA
HMI1 YOL095C Mitochondrial inner membrane localized ATP-dependent DNA helicase physical 1 1 1 Affinity Capture-RNA
SEG2 YKL105C Eisosome component physical 1 1 1 Affinity Capture-RNA
VHS1 YDR247W Cytoplasmic serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
PEP5 YMR231W Histone E3 ligase, component of CORVET membrane tethering complex physical 1 1 1 Affinity Capture-RNA
ECO1 YFR027W Acetyltransferase required for sister chromatid cohesion physical 1 1 1 Affinity Capture-RNA
PIF1 YML061C DNA helicase, potent G-quadruplex DNA binder/unwinder physical 1 1 1 Affinity Capture-RNA
PIF1 YML061C DNA helicase, potent G-quadruplex DNA binder/unwinder genetic 1 1 1 Synthetic Growth Defect
NCA2 YPR155C Protein that regulates expression of Fo-F1 ATP synthase subunits physical 1 1 1 Affinity Capture-RNA
STH1 YIL126W ATPase component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
GIP3 YPL137C Cytoplasmic protein that regulates protein phosphatase 1 Glc7p physical 1 1 1 Affinity Capture-RNA
VPS41 YDR080W Subunit of the HOPS endocytic tethering complex physical 1 1 1 Affinity Capture-RNA
SNA4 YDL123W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
UME6 YDR207C Rpd3L histone deacetylase complex subunit physical 1 1 1 Affinity Capture-RNA
PPT2 YPL148C Phosphopantetheine:protein transferase (PPTase) physical 1 1 1 Affinity Capture-RNA
SDS3 YIL084C Component of the Rpd3L histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
SDS3 YIL084C Component of the Rpd3L histone deacetylase complex genetic 1 1 1 Synthetic Growth Defect
YBR138C YBR138C Cytoplasmic protein of unknown function physical 1 1 1 Affinity Capture-RNA
EBS1 YDR206W Protein involved in translation inhibition and nonsense-mediated decay physical 1 1 1 Affinity Capture-RNA
YUH1 YJR099W Ubiquitin C-terminal hydrolase physical 1 1 1 Affinity Capture-RNA
YUH1 YJR099W Ubiquitin C-terminal hydrolase genetic 1 1 1 Negative Genetic
CTK2 YJL006C Beta subunit of C-terminal domain kinase I (CTDK-I) physical 1 1 1 Affinity Capture-RNA
GIN4 YDR507C Protein kinase involved in bud growth and assembly of the septin ring physical 1 1 1 Affinity Capture-RNA
GIN4 YDR507C Protein kinase involved in bud growth and assembly of the septin ring genetic 1 1 1 Synthetic Growth Defect
IBA57 YJR122W Protein involved in incorporating iron-sulfur clusters into proteins physical 1 1 1 Affinity Capture-RNA
STB5 YHR178W Transcription factor physical 1 1 1 Affinity Capture-RNA
STB5 YHR178W Transcription factor genetic 1 1 1 Synthetic Lethality
PFD1 YJL179W Subunit of heterohexameric prefoldin physical 1 1 1 Affinity Capture-RNA
HEM12 YDR047W Uroporphyrinogen decarboxylase physical 1 1 1 Affinity Capture-RNA
DXO1 YDR370C Cytoplasmic 5' exoribonuclease physical 1 1 1 Affinity Capture-RNA
ECM5 YMR176W Subunit of the Snt2C complex physical 1 1 1 Affinity Capture-RNA
RIP1 YEL024W Ubiquinol-cytochrome-c reductase physical 1 1 1 Affinity Capture-RNA
ENV9 YOR246C Conserved oxidoreductase involved in lipid droplet morphology physical 1 1 1 Affinity Capture-RNA
SRB7 YDR308C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
TOS6 YNL300W Glycosylphosphatidylinositol-dependent cell wall protein physical 1 1 1 Affinity Capture-RNA
YPT6 YLR262C Rab family GTPase physical 1 1 1 Affinity Capture-RNA
YDR042C YDR042C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
LST7 YGR057C Subunit of the Lst4p-Lst7p GTPase activating protein complex for Gtr2p physical 1 1 1 Affinity Capture-RNA
TFC7 YOR110W RNA pol III transcription initiation factor complex (TFIIIC) subunit physical 1 1 1 Affinity Capture-RNA
DJP1 YIR004W ER-associated chaperone involved in protein targeting physical 1 1 1 Affinity Capture-RNA
PPG1 YNR032W Serine protein phosphatase involved in formation of FAR complex physical 1 1 1 Affinity Capture-RNA
PIR1 YKL164C O-glycosylated protein required for cell wall stability physical 1 1 1 Affinity Capture-RNA
NPR2 YEL062W Subunit of the Iml1p/SEACIT complex physical 1 1 1 Affinity Capture-RNA
MAY24 YPR153W Peripheral ER membrane protein physical 1 1 1 Affinity Capture-RNA
SSF1 YHR066W Constituent of 66S pre-ribosomal particles physical 1 1 1 Affinity Capture-RNA
YOR385W YOR385W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MST1 YKL194C Mitochondrial threonyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
POA1 YBR022W Phosphatase that is highly specific for ADP-ribose 1''-phosphate physical 1 1 1 Affinity Capture-RNA
TFC1 YBR123C Subunit of RNA polymerase III transcription initiation factor complex physical 1 1 1 Affinity Capture-RNA
DGA1 YOR245C Diacylglycerol acyltransferase physical 1 1 1 Affinity Capture-RNA
PUL4 YNR063W Putative zinc-cluster transcription factor physical 1 1 1 Affinity Capture-RNA
YJU2 YKL095W Essential protein required for pre-mRNA splicing physical 1 1 1 Affinity Capture-RNA
NAB3 YPL190C RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p) physical 1 1 1 Affinity Capture-RNA
YER152C YER152C Protein with 2-aminoadipate transaminase activity physical 1 1 1 Affinity Capture-RNA
HSP42 YDR171W Small heat shock protein (sHSP) with chaperone activity physical 1 1 1 Affinity Capture-RNA
PPH3 YDR075W Catalytic subunit of protein phosphatase PP4 complex physical 1 1 1 Affinity Capture-RNA
CTH1 YDR151C mRNA binding protein, member of the CCCH zinc finger family physical 1 1 1 Affinity Capture-RNA
YDR239C YDR239C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YML108W YML108W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MBA1 YBR185C Membrane-associated mitochondrial ribosome receptor physical 1 1 1 Affinity Capture-RNA
RHO4 YKR055W Non-essential small GTPase physical 1 1 1 Affinity Capture-RNA
HAL9 YOL089C Putative transcription factor containing a zinc finger physical 1 1 1 Affinity Capture-RNA
MDR1 YGR100W Cytoplasmic GTPase-activating protein physical 1 1 1 Affinity Capture-RNA
YGL117W YGL117W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
GDE1 YPL110C Glycerophosphocholine (GroPCho) phosphodiesterase physical 1 1 1 Affinity Capture-RNA
NOB1 YOR056C Protein involved in proteasomal and 40S ribosomal subunit biogenesis physical 1 1 1 Affinity Capture-RNA
MMS21 YEL019C Highly conserved SUMO E3 ligase subunit of SMC5-SMC6 complex physical 1 1 1 Affinity Capture-RNA
TAF3 YPL011C TFIID subunit (47 kDa) physical 1 1 1 Affinity Capture-RNA
PHO87 YCR037C Low-affinity inorganic phosphate (Pi) transporter physical 1 1 1 Affinity Capture-RNA
IXR1 YKL032C Transcriptional repressor that regulates hypoxic genes during normoxia physical 1 1 1 Affinity Capture-RNA
TTI1 YKL033W Subunit of the ASTRA complex, involved in chromatin remodeling physical 1 1 1 Affinity Capture-RNA
TTI1 YKL033W Subunit of the ASTRA complex, involved in chromatin remodeling genetic 1 1 1 Negative Genetic
MIM1 YOL026C Mitochondrial protein required for outer membrane protein import physical 1 1 1 Affinity Capture-RNA
IRC21 YMR073C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RNH203 YLR154C Ribonuclease H2 subunit physical 1 1 1 Affinity Capture-RNA
ECM7 YLR443W Putative integral membrane protein with a role in calcium uptake physical 1 1 1 Affinity Capture-RNA
RCL1 YOL010W Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis physical 1 1 1 Affinity Capture-RNA
MRX9 YDL027C Protein that associates with mitochondrial ribosome physical 1 1 1 Affinity Capture-RNA
FMP32 YFL046W Regulator of mitochondrial proline metabolism physical 1 1 1 Affinity Capture-RNA
YDL180W YDL180W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
VPS21 YOR089C Endosomal Rab family GTPase physical 1 1 1 Affinity Capture-RNA
CHS5 YLR330W Component of the exomer complex physical 1 1 1 Affinity Capture-RNA
MGM1 YOR211C Mitochondrial GTPase, present in complex with Ugo1p and Fzo1p physical 1 1 1 Affinity Capture-RNA
RTG1 YOL067C Transcription factor (bHLH) involved in interorganelle communication physical 1 1 1 Affinity Capture-RNA
MRPL39 YML009C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
IMO32 YGR031W Conserved mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
YJL070C YJL070C Putative metallo-dependent hydrolase superfamily protein physical 1 1 1 Affinity Capture-RNA
NKP1 YDR383C Central kinetochore protein and subunit of the Ctf19 complex physical 1 1 1 Affinity Capture-RNA
ESC1 YMR219W Protein involved in telomeric silencing physical 1 1 1 Affinity Capture-RNA
NNR1 YNL200C NADHX epimerase physical 1 1 1 Affinity Capture-RNA
MEC3 YLR288C DNA damage and meiotic pachytene checkpoint protein physical 1 1 1 Affinity Capture-RNA
STN1 YDR082W Telomere end-binding and capping protein physical 1 1 1 Affinity Capture-RNA
RGT1 YKL038W Glucose-responsive transcription factor physical 1 1 1 Affinity Capture-RNA
VPS4 YPR173C AAA-ATPase involved in multivesicular body (MVB) protein sorting physical 1 1 1 Affinity Capture-RNA
EAF3 YPR023C Component of the Rpd3S histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
FAL1 YDR021W Nucleolar protein required for maturation of 18S rRNA physical 1 1 1 Affinity Capture-RNA
YPL150W YPL150W Protein kinase of unknown cellular role physical 1 1 1 Affinity Capture-RNA
NAB6 YML117W Putative RNA-binding protein physical 1 1 1 Affinity Capture-RNA
ERP5 YHR110W Protein with similarity to Emp24p and Erv25p physical 1 1 1 Affinity Capture-RNA
IRC6 YFR043C Clathrin coat accessory factor physical 1 1 1 Affinity Capture-RNA
MRPL4 YLR439W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
NPP2 YEL016C Nucleotide pyrophosphatase/phosphodiesterase physical 1 1 1 Affinity Capture-RNA
VPS501 YKR078W Vacuolar SNX-BAR protein physical 1 1 1 Affinity Capture-RNA
RPC19 YNL113W RNA polymerase subunit AC19 physical 1 1 1 Affinity Capture-RNA
STU2 YLR045C Microtubule polymerase of the XMAP215/Dis1 family physical 1 1 1 Affinity Capture-RNA
STU2 YLR045C Microtubule polymerase of the XMAP215/Dis1 family genetic 1 1 1 Negative Genetic
SHE1 YBL031W Mitotic spindle protein physical 1 1 1 Affinity Capture-RNA
SSQ1 YLR369W Mitochondrial hsp70-type molecular chaperone physical 1 1 1 Affinity Capture-RNA
SIP2 YGL208W One of three alternate beta subunits of the Snf1 kinase complex physical 1 1 1 Affinity Capture-RNA
YIP5 YGL161C Protein that interacts with Rab GTPases physical 1 1 1 Affinity Capture-RNA
SLD7 YOR060C Protein with a role in chromosomal DNA replication physical 1 1 1 Affinity Capture-RNA
SEC8 YPR055W Essential 121 kDa subunit of the exocyst complex physical 1 1 1 Affinity Capture-RNA
RCY1 YJL204C F-box protein involved in recycling endocytosed proteins physical 1 1 1 Affinity Capture-RNA
RCY1 YJL204C F-box protein involved in recycling endocytosed proteins genetic 1 1 1 Synthetic Lethality
SUA5 YGL169W Protein involved in threonylcarbamoyl adenosine biosynthesis physical 1 1 1 Affinity Capture-RNA
SIP1 YDR422C One of three alternate beta-subunits of the Snf1p kinase complex physical 1 1 1 Affinity Capture-RNA
HTD2 YHR067W Mitochondrial 3-hydroxyacyl-thioester dehydratase physical 1 1 1 Affinity Capture-RNA
MTR3 YGR158C Exosome non-catalytic core component physical 1 1 1 Affinity Capture-RNA
SHE4 YOR035C Protein containing a UCS (UNC-45/CRO1/SHE4) domain physical 1 1 1 Affinity Capture-RNA
NGR1 YBR212W RNA binding protein that negatively regulates growth rate physical 1 1 1 Affinity Capture-RNA
SPB1 YCL054W AdoMet-dependent methyltransferase physical 1 1 1 Affinity Capture-RNA
SMF3 YLR034C Putative divalent metal ion transporter involved in iron homeostasis physical 1 1 1 Affinity Capture-RNA
IRS4 YKR019C EH domain-containing protein physical 1 1 1 Affinity Capture-RNA
RPS29B YDL061C Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
RPS29B YDL061C Protein component of the small (40S) ribosomal subunit genetic 1 1 1 Synthetic Growth Defect
YTA12 YMR089C Mitochondrial inner membrane m-AAA protease component physical 1 1 1 Affinity Capture-RNA
ECM22 YLR228C Sterol regulatory element binding protein physical 1 1 1 Affinity Capture-RNA
IOC2 YLR095C Subunit of the Isw1b complex physical 1 1 1 Affinity Capture-RNA
RAD55 YDR076W Protein that stimulates strand exchange physical 1 1 1 Affinity Capture-RNA
RTP1 YMR185W Protein required for the nuclear import and biogenesis of RNA pol II physical 1 1 1 Affinity Capture-RNA
RNY1 YPL123C Vacuolar RNase of the T(2) family physical 1 1 1 Affinity Capture-RNA
PEX22 YAL055W Putative peroxisomal membrane protein physical 1 1 1 Affinity Capture-RNA
LEA1 YPL213W Component of U2 snRNP complex physical 1 1 1 Affinity Capture-RNA
RRI1 YDL216C Catalytic subunit of the COP9 signalosome (CSN) complex physical 1 1 1 Affinity Capture-RNA
MRPL10 YNL284C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
SEC15 YGL233W Essential 113 kDa subunit of the exocyst complex physical 1 1 1 Affinity Capture-RNA
CFD1 YIL003W Highly conserved iron-sulfur cluster binding protein physical 1 1 1 Affinity Capture-RNA
YNL046W YNL046W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRPL32 YCR003W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
FMN1 YDR236C Riboflavin kinase, produces riboflavin monophosphate (FMN) physical 1 1 1 Affinity Capture-RNA
PRP19 YLL036C Splicing factor associated with the spliceosome physical 1 1 1 Affinity Capture-RNA
ECM1 YAL059W Pre-ribosomal factor involved in 60S ribosomal protein subunit export physical 1 1 1 Affinity Capture-RNA
PEX8 YGR077C Intraperoxisomal organizer of the peroxisomal import machinery physical 1 1 1 Affinity Capture-RNA
PIG1 YLR273C Putative targeting subunit for type-1 protein phosphatase Glc7p physical 1 1 1 Affinity Capture-RNA
HAP5 YOR358W Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex physical 1 1 1 Affinity Capture-RNA
MIT1 YEL007W Transcriptional regulator of pseudohyphal growth physical 1 1 1 Affinity Capture-RNA
MIT1 YEL007W Transcriptional regulator of pseudohyphal growth genetic 1 1 1 Synthetic Lethality
PML1 YLR016C Subunit of the RES complex physical 1 1 1 Affinity Capture-RNA
TMC1 YOR052C AN1-type zinc finger protein, effector of proteotoxic stress response physical 1 1 1 Affinity Capture-RNA
VPS52 YDR484W Component of the GARP (Golgi-associated retrograde protein) complex physical 1 1 1 Affinity Capture-RNA
VPS52 YDR484W Component of the GARP (Golgi-associated retrograde protein) complex genetic 1 1 1 Synthetic Lethality
DIG1 YPL049C MAP kinase-responsive inhibitor of the Ste12p transcription factor physical 1 1 1 Affinity Capture-RNA
MOB1 YIL106W Component of the mitotic exit network physical 1 1 1 Affinity Capture-RNA
WHI2 YOR043W Negative regulator of TORC1 in response to limiting leucine physical 1 1 1 Affinity Capture-RNA
NPR3 YHL023C Subunit of the Iml1p/SEACIT complex physical 1 1 1 Affinity Capture-RNA
COA1 YIL157C Mitochondrial inner membrane protein physical 1 1 1 Affinity Capture-RNA
IME1 YJR094C Master regulator of meiosis that is active only during meiotic events physical 1 1 1 Affinity Capture-RNA
YKL091C YKL091C Putative phosphatidylinositol/phosphatidylcholine transfer protein physical 1 1 1 Affinity Capture-RNA
PCF11 YDR228C mRNA 3' end processing factor physical 1 1 1 Affinity Capture-RNA
SET2 YJL168C Histone methyltransferase with a role in transcriptional elongation physical 1 1 1 Affinity Capture-RNA
POP1 YNL221C Subunit of RNase MRP, nuclear RNase P and telomerase complexes physical 1 1 1 Affinity Capture-RNA
ULS1 YOR191W Swi2/Snf2-related translocase, SUMO-Targeted Ubiquitin Ligase (STUbL) physical 1 1 1 Affinity Capture-RNA
XKS1 YGR194C Xylulokinase physical 1 1 1 Affinity Capture-RNA
SEA4 YBL104C Subunit of SEACAT, a subcomplex of the SEA complex physical 1 1 1 Affinity Capture-RNA
VPS27 YNR006W Endosomal protein that forms a complex with Hse1p physical 1 1 1 Affinity Capture-RNA
VPS27 YNR006W Endosomal protein that forms a complex with Hse1p genetic 1 1 1 Negative Genetic
PHO23 YNL097C Component of the Rpd3L histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
NVJ3 YDR179W-A Protein with a potential role in tethering ER and vacuoles physical 1 1 1 Affinity Capture-RNA
RIM13 YMR154C Calpain-like cysteine protease physical 1 1 1 Affinity Capture-RNA
NOP6 YDL213C rRNA-binding protein required for 40S ribosomal subunit biogenesis physical 1 1 1 Affinity Capture-RNA
TOD6 YBL054W PAC motif binding protein involved in rRNA and ribosome biogenesis physical 1 1 1 Affinity Capture-RNA
UTP14 YML093W Subunit of U3-containing Small Subunit (SSU) processome complex physical 1 1 1 Affinity Capture-RNA
SLH1 YGR271W Subunit of ribosome-associated quality control trigger complex (RQT) physical 1 1 1 Affinity Capture-RNA
DAP1 YPL170W Heme-binding protein physical 1 1 1 Affinity Capture-RNA
XRS2 YDR369C FHA domain-containing component of the Mre11 complex physical 1 1 1 Affinity Capture-RNA
REG1 YDR028C Regulatory subunit of type 1 protein phosphatase Glc7p physical 1 1 1 Affinity Capture-RNA
MED2 YDL005C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
NDI1 YML120C NADH:ubiquinone oxidoreductase physical 1 1 1 Affinity Capture-RNA
MED6 YHR058C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
YOL036W YOL036W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YNR066C YNR066C Putative membrane-localized protein of unknown function physical 1 1 1 Affinity Capture-RNA
SLM1 YIL105C Phosphoinositide PI4,5P(2) binding protein, forms a complex with Slm2p physical 1 1 1 Affinity Capture-RNA
YTA7 YGR270W Chromatin-binding ATPase that regulates histone gene expression physical 1 1 1 Affinity Capture-RNA
MDM30 YLR368W F-box component of an SCF ubiquitin protein ligase complex physical 1 1 1 Affinity Capture-RNA
MDM30 YLR368W F-box component of an SCF ubiquitin protein ligase complex genetic 1 1 1 Synthetic Growth Defect
CTS2 YDR371W Putative chitinase physical 1 1 1 Affinity Capture-RNA
YMR262W YMR262W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YNL146W YNL146W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
GCN5 YGR252W Catalytic subunit of ADA and SAGA histone acetyltransferase complexes physical 1 1 1 Affinity Capture-RNA
GCN5 YGR252W Catalytic subunit of ADA and SAGA histone acetyltransferase complexes genetic 1 1 1 Synthetic Lethality
YAP3 YHL009C Basic leucine zipper (bZIP) transcription factor physical 1 1 1 Affinity Capture-RNA
VPS24 YKL041W One of four subunits of the ESCRT-III complex physical 1 1 1 Affinity Capture-RNA
VPS24 YKL041W One of four subunits of the ESCRT-III complex genetic 1 1 1 Synthetic Growth Defect
TAF12 YDR145W Subunit (61/68 kDa) of TFIID and SAGA complexes physical 1 1 1 Affinity Capture-RNA
IPI1 YHR085W Component of the Rix1 complex and possibly pre-replicative complexes physical 1 1 1 Affinity Capture-RNA
MME1 YMR166C Transporter of the mitochondrial inner membrane that exports magnesium physical 1 1 1 Affinity Capture-RNA
ECM18 YDR125C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
COQ10 YOL008W Coenzyme Q (ubiquinone) binding protein physical 1 1 1 Affinity Capture-RNA
EOS1 YNL080C Protein involved in N-glycosylation physical 1 1 1 Affinity Capture-RNA
RTC4 YNL254C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
TAF2 YCR042C TFIID subunit (150 kDa) physical 1 1 1 Affinity Capture-RNA
MET2 YNL277W L-homoserine-O-acetyltransferase physical 1 1 1 Affinity Capture-RNA
SMX3 YPR182W Core Sm protein Sm F physical 1 1 1 Affinity Capture-RNA
MRPL23 YOR150W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
PGM2 YMR105C Phosphoglucomutase physical 1 1 1 Affinity Capture-RNA
NMD4 YLR363C Protein that may be involved in nonsense-mediated mRNA decay physical 1 1 1 Affinity Capture-RNA
MPS1 YDL028C Dual-specificity kinase physical 1 1 1 Affinity Capture-RNA
YPR003C YPR003C Putative sulfate permease physical 1 1 1 Affinity Capture-RNA
LAS17 YOR181W Actin assembly factor physical 1 1 1 Affinity Capture-RNA
RKM5 YLR137W Protein lysine methyltransferase physical 1 1 1 Affinity Capture-RNA
ORC3 YLL004W Subunit of the origin recognition complex (ORC) physical 1 1 1 Affinity Capture-RNA
RIM15 YFL033C Protein kinase involved in cell proliferation in response to nutrients physical 1 1 1 Affinity Capture-RNA
MRPL31 YKL138C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
RTT102 YGR275W Component of both the SWI/SNF and RSC chromatin remodeling complexes physical 1 1 1 Affinity Capture-RNA
VNX1 YNL321W Calcium/H+ antiporter localized to the endoplasmic reticulum membrane physical 1 1 1 Affinity Capture-RNA
STP2 YHR006W Transcription factor physical 1 1 1 Affinity Capture-RNA
SWT21 YNL187W Protein involved in mRNA splicing physical 1 1 1 Affinity Capture-RNA
HCS1 YKL017C Hexameric DNA polymerase alpha-associated DNA helicase A physical 1 1 1 Affinity Capture-RNA
HUL4 YJR036C Protein with similarity to hect domain E3 ubiquitin-protein ligases physical 1 1 1 Affinity Capture-RNA
YHK8 YHR048W Presumed antiporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
RRN9 YMR270C Protein involved in promoting high level transcription of rDNA physical 1 1 1 Affinity Capture-RNA
YPC1 YBR183W Alkaline ceramidase physical 1 1 1 Affinity Capture-RNA
LYS5 YGL154C Phosphopantetheinyl transferase involved in lysine biosynthesis physical 1 1 1 Affinity Capture-RNA
MRPL8 YJL063C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
SEC2 YNL272C Guanyl-nucleotide exchange factor for the small G-protein Sec4p physical 1 1 1 Affinity Capture-RNA
STE14 YDR410C Farnesyl cysteine-carboxyl methyltransferase physical 1 1 1 Affinity Capture-RNA
TIP20 YGL145W Peripheral membrane protein required for COPI vesicle fusion to the ER physical 1 1 1 Affinity Capture-RNA
SAC3 YDR159W mRNA export factor physical 1 1 1 Affinity Capture-RNA
MPH1 YIR002C 3'-5' DNA helicase involved in error-free bypass of DNA lesions physical 1 1 1 Affinity Capture-RNA
MTC4 YBR255W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ISM1 YPL040C Mitochondrial isoleucyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
CIT1 YNR001C Mitochondrial citrate synthase physical 1 1 1 Affinity Capture-RNA
CDC24 YAL041W Guanine nucleotide exchange factor (GEF) for Cdc42p physical 1 1 1 Affinity Capture-RNA
OTU2 YHL013C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
CTI6 YPL181W Component of the Rpd3L histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
TAF11 YML015C TFIID subunit (40 kDa) physical 1 1 1 Affinity Capture-RNA
SOG2 YOR353C Key component of the RAM signaling network physical 1 1 1 Affinity Capture-RNA
IQG1 YPL242C Actin filament binding protein that enhances actin ring formation physical 1 1 1 Affinity Capture-RNA
TRI1 YMR233W Non-essential sumoylated protein of unknown function physical 1 1 1 Affinity Capture-RNA
LOT6 YLR011W FMN-dependent NAD(P)H:quinone reductase physical 1 1 1 Affinity Capture-RNA
TFG1 YGR186W TFIIF (Transcription Factor II) largest subunit physical 1 1 1 Affinity Capture-RNA
RPS26B YER131W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
YKE4 YIL023C Zinc transporter physical 1 1 1 Affinity Capture-RNA
ULA1 YPL003W Protein that activates Rub1p (NEDD8) before neddylation physical 1 1 1 Affinity Capture-RNA
PFS2 YNL317W Integral subunit of the pre-mRNA CPF complex physical 1 1 1 Affinity Capture-RNA
DCK1 YLR422W Dock family protein (Dedicator Of CytoKinesis), homolog of human DOCK1 physical 1 1 1 Affinity Capture-RNA
PRP46 YPL151C Member of the NineTeen Complex (NTC) physical 1 1 1 Affinity Capture-RNA
PTK2 YJR059W Serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
TRS85 YDR108W Component of transport protein particle (TRAPP) complex III physical 1 1 1 Affinity Capture-RNA
SLN1 YIL147C Transmembrane histidine phosphotransfer kinase and osmosensor physical 1 1 1 Affinity Capture-RNA
SLN1 YIL147C Transmembrane histidine phosphotransfer kinase and osmosensor genetic 1 1 1 Negative Genetic
SPT7 YBR081C Subunit of the SAGA transcriptional regulatory complex physical 1 1 1 Affinity Capture-RNA
PDS5 YMR076C Cohesion maintenance factor physical 1 1 1 Affinity Capture-RNA
IBD2 YNL164C Component of the BUB2-dependent spindle checkpoint pathway physical 1 1 1 Affinity Capture-RNA
SAW1 YAL027W 5'- and 3'-flap DNA binding protein physical 1 1 1 Affinity Capture-RNA
COQ6 YGR255C Flavin-dependent monooxygenase involved in ubiquinone biosynthesis physical 1 1 1 Affinity Capture-RNA
GUT2 YIL155C Mitochondrial glycerol-3-phosphate dehydrogenase physical 1 1 1 Affinity Capture-RNA
RSC3 YDR303C Component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
LOC1 YFR001W Nucleolar protein involved in the asymmetric localization of ASH1 mRNA physical 1 1 1 Affinity Capture-RNA
PUT2 YHR037W Delta-1-pyrroline-5-carboxylate dehydrogenase physical 1 1 1 Affinity Capture-RNA
TRF5 YNL299W Non-canonical poly(A) polymerase physical 1 1 1 Affinity Capture-RNA
HLJ1 YMR161W Co-chaperone for Hsp40p physical 1 1 1 Affinity Capture-RNA
DSL1 YNL258C Peripheral membrane protein needed for Golgi-to-ER retrograde traffic physical 1 1 1 Affinity Capture-RNA
SNX3 YOR357C Sorting nexin for late-Golgi enzymes physical 1 1 1 Affinity Capture-RNA
TRK1 YJL129C Component of the Trk1p-Trk2p potassium transport system physical 1 1 1 Affinity Capture-RNA
CSM3 YMR048W Replication fork associated factor physical 1 1 1 Affinity Capture-RNA
RAD5 YLR032W DNA helicase/Ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
RAD5 YLR032W DNA helicase/Ubiquitin ligase genetic 1 1 1 Dosage Lethality
YIM1 YMR152W Aldehyde reductase physical 1 1 1 Affinity Capture-RNA
RIB1 YBL033C GTP cyclohydrolase II physical 1 1 1 Affinity Capture-RNA
SPP41 YDR464W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YMR1 YJR110W Phosphatidylinositol 3-phosphate (PI3P) phosphatase physical 1 1 1 Affinity Capture-RNA
RUD3 YOR216C Golgi matrix protein physical 1 1 1 Affinity Capture-RNA
PPS1 YBR276C Protein phosphatase physical 1 1 1 Affinity Capture-RNA
PDL32 YMR087W Putative ADP-ribose-1''-monophosphatase physical 1 1 1 Affinity Capture-RNA
ESL1 YIL151C hEST1A/B (SMG5/6)-like protein physical 1 1 1 Affinity Capture-RNA
UBP14 YBR058C Ubiquitin-specific protease physical 1 1 1 Affinity Capture-RNA
NBP35 YGL091C Essential cytoplasmic iron-sulfur cluster binding protein physical 1 1 1 Affinity Capture-RNA
SWI4 YER111C DNA binding component of the SBF complex (Swi4p-Swi6p) physical 1 1 1 Affinity Capture-RNA
MRPS5 YBR251W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
ICT1 YLR099C Lysophosphatidic acid acyltransferase physical 1 1 1 Affinity Capture-RNA
MSA1 YOR066W Activator of G1-specific transcription factors MBF and SBF physical 1 1 1 Affinity Capture-RNA
RPS27A YKL156W Protein component of the small (40S) ribosomal subunit physical 1 1 1 Affinity Capture-RNA
CYC2 YOR037W Mitochondrial peripheral inner membrane protein physical 1 1 1 Affinity Capture-RNA
ELG1 YOR144C Subunit of an alternative replication factor C complex physical 1 1 1 Affinity Capture-RNA
CEF1 YMR213W Essential splicing factor physical 1 1 1 Affinity Capture-RNA
MED7 YOL135C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
SNN1 YNL086W Subunit of the BLOC-1 complex involved in endosomal maturation physical 1 1 1 Affinity Capture-RNA
SNN1 YNL086W Subunit of the BLOC-1 complex involved in endosomal maturation genetic 1 1 1 Synthetic Lethality
RGL1 YPL066W Regulator of Rho1p signaling, cofactor of Tus1p physical 1 1 1 Affinity Capture-RNA
RIM21 YNL294C pH sensor molecule, component of the RIM101 pathway physical 1 1 1 Affinity Capture-RNA
FET3 YMR058W Ferro-O2-oxidoreductase physical 1 1 1 Affinity Capture-RNA
FET3 YMR058W Ferro-O2-oxidoreductase genetic 1 1 1 Dosage Growth Defect
FOB1 YDR110W Nucleolar protein that binds the rDNA replication fork barrier site physical 1 1 1 Affinity Capture-RNA
FOB1 YDR110W Nucleolar protein that binds the rDNA replication fork barrier site genetic 1 1 1 Phenotypic Suppression
RPL31B YLR406C Ribosomal 60S subunit protein L31B physical 1 1 1 Affinity Capture-RNA
RSM23 YGL129C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
SPC29 YPL124W Inner plaque spindle pole body (SPB) component physical 1 1 1 Affinity Capture-RNA
SPC110 YDR356W Inner plaque spindle pole body (SPB) component physical 1 1 1 Affinity Capture-RNA
CDC26 YFR036W Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) physical 1 1 1 Affinity Capture-RNA
RXT2 YBR095C Component of the histone deacetylase Rpd3L complex physical 1 1 1 Affinity Capture-RNA
ELP4 YPL101W Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex physical 1 1 1 Affinity Capture-RNA
YKU80 YMR106C Subunit of telomeric Ku complex (Yku70p-Yku80p) physical 1 1 1 Affinity Capture-RNA
YPR089W YPR089W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SNU56 YDR240C Component of U1 snRNP required for mRNA splicing via spliceosome physical 1 1 1 Affinity Capture-RNA
SWH1 YAR042W Protein similar to mammalian oxysterol-binding protein physical 1 1 1 Affinity Capture-RNA
MPS2 YGL075C Essential membrane protein localized at nuclear envelope and SPBs physical 1 1 1 Affinity Capture-RNA
PHD1 YKL043W Transcriptional activator that enhances pseudohyphal growth physical 1 1 1 Affinity Capture-RNA
MRPL33 YMR286W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
YDL241W YDL241W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
VHS2 YIL135C Regulator of septin dynamics physical 1 1 1 Affinity Capture-RNA
GCR2 YNL199C Transcriptional activator of genes involved in glycolysis physical 1 1 1 Affinity Capture-RNA
CWC24 YLR323C General splicing factor physical 1 1 1 Affinity Capture-RNA
PEX28 YHR150W Peroxisomal integral membrane peroxin physical 1 1 1 Affinity Capture-RNA
RAD61 YDR014W Subunit of a complex that inhibits sister chromatid cohesion physical 1 1 1 Affinity Capture-RNA
VPS30 YPL120W Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II physical 1 1 1 Affinity Capture-RNA
YGR017W YGR017W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRPL3 YMR024W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
SRC1 YML034W Inner nuclear membrane protein physical 1 1 1 Affinity Capture-RNA
UPS1 YLR193C Phosphatidic acid transfer protein physical 1 1 1 Affinity Capture-RNA
PTC1 YDL006W Type 2C protein phosphatase (PP2C) physical 1 1 1 Affinity Capture-RNA
DNF3 YMR162C Trans-golgi network aminophospholipid translocase (flippase) physical 1 1 1 Affinity Capture-RNA
MET30 YIL046W F-box protein containing five copies of the WD40 motif physical 1 1 1 Affinity Capture-RNA
MSE1 YOL033W Mitochondrial glutamyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
YDR514C YDR514C Protein of unknown function that localizes to mitochondria physical 1 1 1 Affinity Capture-RNA
VHC1 YBR235W Vacuolar membrane cation-chloride cotransporter (CCC) physical 1 1 1 Affinity Capture-RNA
EAP1 YKL204W eIF4E-associated protein, competes with eIF4G for binding to eIF4E physical 1 1 1 Affinity Capture-RNA
EAP1 YKL204W eIF4E-associated protein, competes with eIF4G for binding to eIF4E genetic 1 1 1 Synthetic Lethality
DRN1 YGR093W Splicing factor that modulates turnover of branched RNAs by Dbr1p physical 1 1 1 Affinity Capture-RNA
PEX34 YCL056C Protein that regulates peroxisome populations physical 1 1 1 Affinity Capture-RNA
DIS3 YOL021C Exosome core complex catalytic subunit physical 1 1 1 Affinity Capture-RNA
RPO41 YFL036W Mitochondrial RNA polymerase physical 1 1 1 Affinity Capture-RNA
TIP41 YPR040W Tap42p-interacting protein physical 1 1 1 Affinity Capture-RNA
TIM22 YDL217C Essential core component of mitochondrial TIM22 complex physical 1 1 1 Affinity Capture-RNA
SNU66 YOR308C Component of the U4/U6.U5 snRNP complex physical 1 1 1 Affinity Capture-RNA
GLC8 YMR311C Regulatory subunit of protein phosphatase 1 (Glc7p) physical 1 1 1 Affinity Capture-RNA
SEI1 YLR404W Seipin involved in lipid droplet (LD) assembly physical 1 1 1 Affinity Capture-RNA
TRS65 YGR166W Component of transport protein particle (TRAPP) complex II physical 1 1 1 Affinity Capture-RNA
DST1 YGL043W General transcription elongation factor TFIIS physical 1 1 1 Affinity Capture-RNA
YER137C YER137C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
DFR1 YOR236W Dihydrofolate reductase involved in tetrahydrofolate biosynthesis physical 1 1 1 Affinity Capture-RNA
HSV2 YGR223C Phosphatidylinositol 3,5-bisphosphate-binding protein physical 1 1 1 Affinity Capture-RNA
YDL199C YDL199C Putative transporter physical 1 1 1 Affinity Capture-RNA
YEA4 YEL004W Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter physical 1 1 1 Affinity Capture-RNA
CNL1 YDR357C Subunit of the BLOC-1 complex involved in endosomal maturation physical 1 1 1 Affinity Capture-RNA
TUS1 YLR425W Guanine nucleotide exchange factor (GEF) that modulates Rho1p activity physical 1 1 1 Affinity Capture-RNA
MRPL28 YDR462W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
TIM17 YJL143W Essential component of the TIM23 complex physical 1 1 1 Affinity Capture-RNA
CUB1 YPL260W Conserved fungal gene linked to DNA repair and proteasome function physical 1 1 1 Affinity Capture-RNA
MTG1 YMR097C Putative GTPase peripheral to the mitochondrial inner membrane physical 1 1 1 Affinity Capture-RNA
TOP1 YOL006C Topoisomerase I physical 1 1 1 Affinity Capture-RNA
SMC4 YLR086W Subunit of the condensin complex physical 1 1 1 Affinity Capture-RNA
SAP1 YER047C Putative ATPase of the AAA family physical 1 1 1 Affinity Capture-RNA
ROX1 YPR065W Heme-dependent repressor of hypoxic genes physical 1 1 1 Affinity Capture-RNA
MSC2 YDR205W Endoplasmic reticulum zinc transporter physical 1 1 1 Affinity Capture-RNA
SEC7 YDR170C Guanine nucleotide exchange factor (GEF) for ADP ribosylation factors physical 1 1 1 Affinity Capture-RNA
PCL9 YDL179W Cyclin physical 1 1 1 Affinity Capture-RNA
RAD10 YML095C Single-stranded DNA endonuclease (with Rad1p) physical 1 1 1 Affinity Capture-RNA
TOS7 YOL019W Protein involved in secretion and cell wall organization physical 1 1 1 Affinity Capture-RNA
FMO1 YHR176W Flavin-containing monooxygenase physical 1 1 1 Affinity Capture-RNA
MCR1 YKL150W Mitochondrial NADH-cytochrome b5 reductase physical 1 1 1 Affinity Capture-RNA
SAD1 YFR005C Conserved zinc-finger domain protein involved in pre-mRNA splicing physical 1 1 1 Affinity Capture-RNA
SAD1 YFR005C Conserved zinc-finger domain protein involved in pre-mRNA splicing genetic 1 1 1 Synthetic Growth Defect
GON7 YJL184W Component of the EKC/KEOPS protein complex physical 1 1 1 Affinity Capture-RNA
YGR126W YGR126W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
TPM2 YIL138C Minor isoform of tropomyosin physical 1 1 1 Affinity Capture-RNA
HEM25 YDL119C Mitochondrial glycine transporter physical 1 1 1 Affinity Capture-RNA
CUS1 YMR240C Protein required for assembly of U2 snRNP into the spliceosome physical 1 1 1 Affinity Capture-RNA
GUD1 YDL238C Guanine deaminase physical 1 1 1 Affinity Capture-RNA
RQC1 YDR333C Component of the ribosome quality control complex (RQC) physical 1 1 1 Affinity Capture-RNA
DIA4 YHR011W Probable mitochondrial seryl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
GPA2 YER020W Nucleotide binding alpha subunit of the heterotrimeric G protein physical 1 1 1 Affinity Capture-RNA
YOR097C YOR097C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
FIN1 YDR130C Spindle pole body-related intermediate filament protein physical 1 1 1 Affinity Capture-RNA
TRS130 YMR218C Component of transport protein particle (TRAPP) complex II physical 1 1 1 Affinity Capture-RNA
VPS55 YJR044C Late endosomal protein involved in late endosome to vacuole transport physical 1 1 1 Affinity Capture-RNA
STB1 YNL309W Protein with role in regulation of MBF-specific transcription at Start physical 1 1 1 Affinity Capture-RNA
SSA4 YER103W Heat shock protein that is highly induced upon stress physical 1 1 1 Affinity Capture-RNA
PET127 YOR017W Protein with a role in 5'-end processing of mitochondrial RNAs physical 1 1 1 Affinity Capture-RNA
SPT23 YKL020C ER membrane protein involved in regulation of OLE1 transcription physical 1 1 1 Affinity Capture-RNA
PRP42 YDR235W U1 snRNP protein involved in splicing physical 1 1 1 Affinity Capture-RNA
MRPL37 YBR268W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
SPT8 YLR055C Subunit of the SAGA transcriptional regulatory complex physical 1 1 1 Affinity Capture-RNA
SPT8 YLR055C Subunit of the SAGA transcriptional regulatory complex genetic 1 1 1 Synthetic Rescue
SSY5 YJL156C Serine protease of SPS plasma membrane amino acid sensor system physical 1 1 1 Affinity Capture-RNA
GIC1 YHR061C Rho-family GTPase interacting protein and Cdc42p effector physical 1 1 1 Affinity Capture-RNA
HHT1 YBR010W Histone H3 physical 1 1 1 Affinity Capture-RNA
TIM13 YGR181W Mitochondrial intermembrane space protein physical 1 1 1 Affinity Capture-RNA
RDS2 YPL133C Transcription factor involved in regulating gluconeogenesis physical 1 1 1 Affinity Capture-RNA
RAD57 YDR004W Protein that stimulates strand exchange physical 1 1 1 Affinity Capture-RNA
RSF1 YMR030W Protein required for respiratory growth physical 1 1 1 Affinity Capture-RNA
NRK1 YNL129W Nicotinamide riboside kinase physical 1 1 1 Affinity Capture-RNA
RTR1 YER139C Dual specificity protein phosphatase physical 1 1 1 Affinity Capture-RNA
FZF1 YGL254W Transcription factor involved in sulfite metabolism physical 1 1 1 Affinity Capture-RNA
SSU72 YNL222W Phosphatase and transcription/RNA-processing factor physical 1 1 1 Affinity Capture-RNA
MLO127 YJR039W Mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
MAK31 YCR020C-A Non-catalytic subunit of N-terminal acetyltransferase of the NatC type physical 1 1 1 Affinity Capture-RNA
HAP3 YBL021C Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex physical 1 1 1 Affinity Capture-RNA
RAD51 YER095W Strand exchange protein physical 1 1 1 Affinity Capture-RNA
NTH1 YDR001C Neutral trehalase, degrades trehalose physical 1 1 1 Affinity Capture-RNA
HAL5 YJL165C Snf1p-related nutrient-responsive protein kinase physical 1 1 1 Affinity Capture-RNA
LAM1 YHR155W Putative sterol transfer protein physical 1 1 1 Affinity Capture-RNA
IWR1 YDL115C RNA polymerase II transport factor, conserved from yeast to humans physical 1 1 1 Affinity Capture-RNA
IVY1 YDR229W Phospholipid-binding protein that interacts with both Ypt7p and Vps33p physical 1 1 1 Affinity Capture-RNA
PRP22 YER013W DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase physical 1 1 1 Affinity Capture-RNA
RAD7 YJR052W Nucleotide excision repair (NER) protein physical 1 1 1 Affinity Capture-RNA
RAD7 YJR052W Nucleotide excision repair (NER) protein genetic 1 1 1 Synthetic Growth Defect
VID27 YNL212W Cytoplasmic protein of unknown function physical 1 1 1 Affinity Capture-RNA
STE7 YDL159W Signal transducing MAP kinase kinase physical 1 1 1 Affinity Capture-RNA
NAT2 YGR147C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RAD54 YGL163C DNA-dependent ATPase that stimulates strand exchange physical 1 1 1 Affinity Capture-RNA
YGL036W YGL036W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SPT3 YDR392W Subunit of the SAGA and SAGA-like transcriptional regulatory complexes physical 1 1 1 Affinity Capture-RNA
RRP14 YKL082C Essential protein, constituent of 66S pre-ribosomal particles physical 1 1 1 Affinity Capture-RNA
UAF30 YOR295W Subunit of UAF (upstream activation factor) complex physical 1 1 1 Affinity Capture-RNA
SWE1 YJL187C Protein kinase that regulates the G2/M transition physical 1 1 1 Affinity Capture-RNA
SWE1 YJL187C Protein kinase that regulates the G2/M transition genetic 1 1 1 Synthetic Rescue
RAD53 YPL153C DNA damage response kinase physical 1 1 1 Affinity Capture-RNA
RAD53 YPL153C DNA damage response kinase genetic 1 1 1 Synthetic Lethality
CEP3 YMR168C Essential kinetochore protein physical 1 1 1 Affinity Capture-RNA
YIR042C YIR042C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PGA1 YNL158W Essential component of GPI-mannosyltransferase II physical 1 1 1 Affinity Capture-RNA
RCR1 YBR005W Plasma membrane (PM) ubiquitin ligase-substrate adaptor physical 1 1 1 Affinity Capture-RNA
SIW14 YNL032W Inositol phosphatase involved in inositol pyrophosphate metabolism physical 1 1 1 Affinity Capture-RNA
TAD2 YJL035C Subunit of tRNA-specific adenosine-34 deaminase physical 1 1 1 Affinity Capture-RNA
YDR222W YDR222W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
EFM5 YGR001C S-adenosylmethionine-dependent lysine methyltransferase physical 1 1 1 Affinity Capture-RNA
WSS1 YHR134W SUMO-ligase and SUMO-targeted metalloprotease physical 1 1 1 Affinity Capture-RNA
CGR1 YGL029W Protein involved in nucleolar integrity and processing of pre-rRNA physical 1 1 1 Affinity Capture-RNA
MSS11 YMR164C Transcription factor physical 1 1 1 Affinity Capture-RNA
VTC5 YDR089W Novel subunit of the vacuolar transporter chaperone complex physical 1 1 1 Affinity Capture-RNA
SRS2 YJL092W DNA helicase and DNA-dependent ATPase physical 1 1 1 Affinity Capture-RNA
MUS81 YDR386W Subunit of structure-specific Mms4p-Mus81p endonuclease physical 1 1 1 Affinity Capture-RNA
MUS81 YDR386W Subunit of structure-specific Mms4p-Mus81p endonuclease genetic 1 1 1 Synthetic Growth Defect
MET1 YKR069W S-adenosyl-L-methionine uroporphyrinogen III transmethylase physical 1 1 1 Affinity Capture-RNA
KNH1 YDL049C Protein with similarity to Kre9p physical 1 1 1 Affinity Capture-RNA
DAS2 YDR020C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
NRG1 YDR043C Transcriptional repressor physical 1 1 1 Affinity Capture-RNA
NRG1 YDR043C Transcriptional repressor genetic 1 1 1 Phenotypic Suppression
UBS1 YBR165W Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p physical 1 1 1 Affinity Capture-RNA
TGL4 YKR089C Multifunctional lipase/hydrolase/phospholipase physical 1 1 1 Affinity Capture-RNA
SMY1 YKL079W Kinesin-like myosin passenger-protein physical 1 1 1 Affinity Capture-RNA
SET3 YKR029C Defining member of the SET3 histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
SFT2 YBL102W Tetra-spanning membrane protein found mostly in the late Golgi physical 1 1 1 Affinity Capture-RNA
HFD1 YMR110C Dehydrogenase involved in ubiquinone and sphingolipid metabolism physical 1 1 1 Affinity Capture-RNA
KIN4 YOR233W Serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
FLR1 YBR008C Plasma membrane transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
IRC23 YOR044W Protein of unknown function involved in multidrug resistance physical 1 1 1 Affinity Capture-RNA
PEX13 YLR191W Peroxisomal importomer complex component physical 1 1 1 Affinity Capture-RNA
PEF1 YGR058W Penta-EF-hand protein physical 1 1 1 Affinity Capture-RNA
VPS5 YOR069W Nexin-1 homolog physical 1 1 1 Affinity Capture-RNA
UBX6 YJL048C UBX (ubiquitin regulatory X) domain-containing protein physical 1 1 1 Affinity Capture-RNA
DFG16 YOR030W Probable multiple transmembrane protein physical 1 1 1 Affinity Capture-RNA
CUL3 YGR003W Ubiquitin-protein ligase physical 1 1 1 Affinity Capture-RNA
TAF8 YML114C TFIID subunit (65 kDa) physical 1 1 1 Affinity Capture-RNA
NIP100 YPL174C Large subunit of the dynactin complex physical 1 1 1 Affinity Capture-RNA
JIP4 YDR475C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RCR2 YDR003W Vacuolar ubiquitin ligase-substrate adaptor physical 1 1 1 Affinity Capture-RNA
PSF1 YDR013W Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) physical 1 1 1 Affinity Capture-RNA
PFA3 YNL326C Palmitoyltransferase for Vac8p physical 1 1 1 Affinity Capture-RNA
FMS1 YMR020W Polyamine oxidase physical 1 1 1 Affinity Capture-RNA
UBX5 YDR330W UBX domain-containing protein that interacts with Cdc48p physical 1 1 1 Affinity Capture-RNA
RNH1 YMR234W Ribonuclease H1 physical 1 1 1 Affinity Capture-RNA
ISY1 YJR050W Member of the NineTeen Complex (NTC) physical 1 1 1 Affinity Capture-RNA
YKL075C YKL075C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RGC1 YPR115W Putative regulator of the Fps1p glycerol channel physical 1 1 1 Affinity Capture-RNA
HTB1 YDR224C Histone H2B physical 1 1 1 Affinity Capture-RNA
KEG1 YFR042W Integral membrane protein of the ER physical 1 1 1 Affinity Capture-RNA
IDS2 YJL146W Protein involved in modulation of Ime2p activity during meiosis physical 1 1 1 Affinity Capture-RNA
PKH1 YDR490C Serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
RSC4 YKR008W Component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
ENT4 YLL038C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
TFB1 YDR311W Subunit of TFIIH and nucleotide excision repair factor 3 complexes physical 1 1 1 Affinity Capture-RNA
MBP1 YDL056W Transcription factor physical 1 1 1 Affinity Capture-RNA
RRP4 YHR069C Exosome non-catalytic core component physical 1 1 1 Affinity Capture-RNA
HES1 YOR237W Protein implicated in the regulation of ergosterol biosynthesis physical 1 1 1 Affinity Capture-RNA
NAR1 YNL240C Subunit of the cytosolic iron-sulfur (FeS) protein assembly machinery physical 1 1 1 Affinity Capture-RNA
GAT1 YFL021W Transcriptional activator of nitrogen catabolite repression genes physical 1 1 1 Affinity Capture-RNA
CUE2 YKL090W Ubiquitin-binding endonuclease involved in mRNA decay physical 1 1 1 Affinity Capture-RNA
IMH1 YLR309C Protein involved in vesicular transport physical 1 1 1 Affinity Capture-RNA
LMO1 YLL007C Homolog of mammalian ELMO (Engulfment and celL MOtility) physical 1 1 1 Affinity Capture-RNA
MCM21 YDR318W Component of the kinetochore sub-complex COMA physical 1 1 1 Affinity Capture-RNA
IZH3 YLR023C Membrane protein involved in zinc ion homeostasis physical 1 1 1 Affinity Capture-RNA
HRT3 YLR097C Putative SCF-ubiquitin ligase F-box protein physical 1 1 1 Affinity Capture-RNA
PMC1 YGL006W Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions physical 1 1 1 Affinity Capture-RNA
GSP2 YOR185C GTP binding protein (mammalian Ranp homolog) physical 1 1 1 Affinity Capture-RNA
COX9 YDL067C Subunit VIIa of cytochrome c oxidase (Complex IV) physical 1 1 1 Affinity Capture-RNA
MRX4 YPL168W Protein that associates with mitochondrial ribosome physical 1 1 1 Affinity Capture-RNA
PDR8 YLR266C Transcription factor physical 1 1 1 Affinity Capture-RNA
YJL118W YJL118W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YSY6 YBR162W-A Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRX1 YER077C Protein that associates with mitochondrial ribosome physical 1 1 1 Affinity Capture-RNA
CCZ1 YBR131W Subunit of a heterodimeric guanine nucleotide exchange factor (GEF) physical 1 1 1 Affinity Capture-RNA
CCZ1 YBR131W Subunit of a heterodimeric guanine nucleotide exchange factor (GEF) genetic 1 1 1 Negative Genetic
SSE2 YBR169C Member of Hsp110 subclass of the heat shock protein 70 (HSP70) family physical 1 1 1 Affinity Capture-RNA
MLP2 YIL149C Myosin-like protein associated with the nuclear envelope physical 1 1 1 Affinity Capture-RNA
MTC2 YKL098W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
OSH2 YDL019C Member of an oxysterol-binding protein family with seven members physical 1 1 1 Affinity Capture-RNA
ECT1 YGR007W Ethanolamine-phosphate cytidylyltransferase physical 1 1 1 Affinity Capture-RNA
FAR11 YNL127W Protein involved in recovery from cell cycle arrest physical 1 1 1 Affinity Capture-RNA
COX7 YMR256C Subunit VII of cytochrome c oxidase (Complex IV) physical 1 1 1 Affinity Capture-RNA
SKS1 YPL026C Putative serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
XYL2 YLR070C Xylitol dehydrogenase physical 1 1 1 Affinity Capture-RNA
YKR045C YKR045C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SAP185 YJL098W Protein that forms a complex with the Sit4p protein phosphatase physical 1 1 1 Affinity Capture-RNA
RRP15 YPR143W Nucleolar protein physical 1 1 1 Affinity Capture-RNA
LPP1 YDR503C Lipid phosphate phosphatase physical 1 1 1 Affinity Capture-RNA
KSS1 YGR040W Mitogen-activated protein kinase (MAPK) physical 1 1 1 Affinity Capture-RNA
INM2 YDR287W Inositol monophosphatase physical 1 1 1 Affinity Capture-RNA
SDS24 YBR214W Protein involved in cell separation during budding physical 1 1 1 Affinity Capture-RNA
CDC16 YKL022C Subunit of the anaphase-promoting complex/cyclosome (APC/C) physical 1 1 1 Affinity Capture-RNA
CDC16 YKL022C Subunit of the anaphase-promoting complex/cyclosome (APC/C) genetic 1 1 1 Negative Genetic
GEP3 YOR205C Protein required for mitochondrial ribosome small subunit biogenesis physical 1 1 1 Affinity Capture-RNA
SLM5 YCR024C Mitochondrial asparaginyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
PDR1 YGL013C Transcription factor that regulates the pleiotropic drug response physical 1 1 1 Affinity Capture-RNA
RMP1 YLR145W Subunit of RNase MRP physical 1 1 1 Affinity Capture-RNA
HKR1 YDR420W Mucin family member that functions as an osmosensor in the HOG pathway physical 1 1 1 Affinity Capture-RNA
SKP2 YNL311C F-box protein of unknown function physical 1 1 1 Affinity Capture-RNA
SIF2 YBR103W WD40 repeat-containing subunit of Set3C histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
KIC1 YHR102W Protein kinase of the PAK/Ste20 family, required for cell integrity physical 1 1 1 Affinity Capture-RNA
MDJ1 YFL016C Co-chaperone that stimulates HSP70 protein Ssc1p ATPase activity physical 1 1 1 Affinity Capture-RNA
PRP5 YBR237W RNA helicase in the DEAD-box family physical 1 1 1 Affinity Capture-RNA
PCT1 YGR202C Cholinephosphate cytidylyltransferase physical 1 1 1 Affinity Capture-RNA
MRP7 YNL005C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MIG1 YGL035C Transcription factor involved in glucose repression physical 1 1 1 Affinity Capture-RNA
FRE8 YLR047C Protein with sequence similarity to iron/copper reductases physical 1 1 1 Affinity Capture-RNA
DYN3 YMR299C Dynein light intermediate chain (LIC) physical 1 1 1 Affinity Capture-RNA
MAF1 YDR005C Highly conserved negative regulator of RNA polymerase III physical 1 1 1 Affinity Capture-RNA
YLR108C YLR108C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PLM2 YDR501W Putative transcription factor, contains Forkhead Associated domain physical 1 1 1 Affinity Capture-RNA
FMP40 YPL222W Mitochondrial AMPylator in the pseudokinase selenoprotein-O family physical 1 1 1 Affinity Capture-RNA
PCL2 YDL127W Cyclin, interacts with cyclin-dependent kinase Pho85p physical 1 1 1 Affinity Capture-RNA
MRX15 YNR040W Membrane-associated mitoribosome receptor physical 1 1 1 Affinity Capture-RNA
TRP1 YDR007W Phosphoribosylanthranilate isomerase physical 1 1 1 Affinity Capture-RNA
NCE102 YPR149W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YAP1 YML007W Basic leucine zipper (bZIP) transcription factor physical 1 1 1 Affinity Capture-RNA
VBA2 YBR293W Permease of basic amino acids in the vacuolar membrane physical 1 1 1 Affinity Capture-RNA
HXK1 YFR053C Hexokinase isoenzyme 1 physical 1 1 1 Affinity Capture-RNA
HAA1 YPR008W Transcriptional activator involved in adaptation to weak acid stress physical 1 1 1 Affinity Capture-RNA
RSC2 YLR357W Component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
RBA50 YDR527W Protein involved in transcription physical 1 1 1 Affinity Capture-RNA
GLE1 YDL207W Cytoplasmic nucleoporin required for polyadenylated mRNA export physical 1 1 1 Affinity Capture-RNA
GTT1 YIR038C ER associated glutathione S-transferase physical 1 1 1 Affinity Capture-RNA
PRB1 YEL060C Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity physical 1 1 1 Affinity Capture-RNA
OCA4 YCR095C Cytoplasmic protein required for replication of Brome mosaic virus physical 1 1 1 Affinity Capture-RNA
DPI35 YMR130W Putative mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
YLR152C YLR152C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
LCL3 YGL085W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRC1 YCL061C S-phase checkpoint protein required for DNA replication physical 1 1 1 Affinity Capture-RNA
LAM6 YLR072W Sterol transporter that transfers sterols between membranes physical 1 1 1 Affinity Capture-RNA
SRL2 YLR082C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
GCV2 YMR189W P subunit of the mitochondrial glycine decarboxylase complex physical 1 1 1 Affinity Capture-RNA
LDB16 YCL005W Protein involved in lipid droplet (LD) assembly physical 1 1 1 Affinity Capture-RNA
MSC6 YOR354C Multicopy suppressor of HER2 involved in mitochondrial translation physical 1 1 1 Affinity Capture-RNA
ESBP6 YNL125C Protein with similarity to monocarboxylate permeases physical 1 1 1 Affinity Capture-RNA
YSH1 YLR277C Endoribonuclease physical 1 1 1 Affinity Capture-RNA
SPT20 YOL148C Subunit of the SAGA transcriptional regulatory complex physical 1 1 1 Affinity Capture-RNA
VIK1 YPL253C Protein that forms a kinesin-14 heterodimeric motor with Kar3p physical 1 1 1 Affinity Capture-RNA
COX16 YJL003W Mitochondrial inner membrane protein physical 1 1 1 Affinity Capture-RNA
YMR315W YMR315W Protein with NADP(H) oxidoreductase activity physical 1 1 1 Affinity Capture-RNA
EAR1 YMR171C Specificity factor required for Rsp5p-dependent ubiquitination physical 1 1 1 Affinity Capture-RNA
REX4 YOL080C Putative RNA exonuclease physical 1 1 1 Affinity Capture-RNA
GPI12 YMR281W ER membrane protein involved in the second step of GPI anchor assembly physical 1 1 1 Affinity Capture-RNA
GPI12 YMR281W ER membrane protein involved in the second step of GPI anchor assembly genetic 1 1 1 Negative Genetic
CDC5 YMR001C Polo-like kinase required for mitotic exit physical 1 1 1 Affinity Capture-RNA
MRPL17 YNL252C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
PIB2 YGL023C Phosphatidylinositol 3-phosphate binding protein physical 1 1 1 Affinity Capture-RNA
LAG2 YOL025W Protein that negatively regulates the SCF E3-ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
CTT1 YGR088W Cytosolic catalase T physical 1 1 1 Affinity Capture-RNA
YMR209C YMR209C Putative S-adenosylmethionine-dependent methyltransferase physical 1 1 1 Affinity Capture-RNA
MMS22 YLR320W Subunit of E3 ubiquitin ligase complex involved in replication repair physical 1 1 1 Affinity Capture-RNA
FMC1 YIL098C Mitochondrial matrix protein physical 1 1 1 Affinity Capture-RNA
PAM18 YLR008C Subunit of the import motor (PAM complex) physical 1 1 1 Affinity Capture-RNA
MRPL9 YGR220C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
MRX16 YDR132C Protein that associates with the large mitoribosomal subunit physical 1 1 1 Affinity Capture-RNA
QRI7 YDL104C Protein involved in threonylcarbamoyl adenosine biosynthesis physical 1 1 1 Affinity Capture-RNA
NSG2 YNL156C Protein involved in regulation of sterol biosynthesis physical 1 1 1 Affinity Capture-RNA
CSL4 YNL232W Exosome non-catalytic core component physical 1 1 1 Affinity Capture-RNA
DLD1 YDL174C Major mitochondrial D-lactate dehydrogenase physical 1 1 1 Affinity Capture-RNA
PGD1 YGL025C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
PXP2 YJR111C Peroxisomal matrix protein with naturally active promoter physical 1 1 1 Affinity Capture-RNA
SOH1 YGL127C Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
SOH1 YGL127C Subunit of the RNA polymerase II mediator complex genetic 1 1 1 Synthetic Lethality
PFU1 YDR306C F-box protein that regulates pheromone-dependent morphogenesis physical 1 1 1 Affinity Capture-RNA
SSK22 YCR073C MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway physical 1 1 1 Affinity Capture-RNA
ESL2 YKR096W hEST1A/B (SMG5/6)-like protein physical 1 1 1 Affinity Capture-RNA
HHT2 YNL031C Histone H3 physical 1 1 1 Affinity Capture-RNA
MCM22 YJR135C Outer kinetochore protein and component of the Ctf3 subcomplex physical 1 1 1 Affinity Capture-RNA
THG1 YGR024C tRNAHis guanylyltransferase physical 1 1 1 Affinity Capture-RNA
NNR2 YKL151C Widely-conserved NADHX dehydratase physical 1 1 1 Affinity Capture-RNA
VMA22 YHR060W Protein that is required for vacuolar H+-ATPase (V-ATPase) function physical 1 1 1 Affinity Capture-RNA
MCD1 YDL003W Essential alpha-kleisin subunit of the cohesin complex physical 1 1 1 Affinity Capture-RNA
MSL1 YIR009W U2B component of U2 snRNP physical 1 1 1 Affinity Capture-RNA
MSL1 YIR009W U2B component of U2 snRNP genetic 1 1 1 Synthetic Lethality
YDL129W YDL129W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
TDA5 YLR426W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
ORC6 YHR118C Subunit of the origin recognition complex (ORC) physical 1 1 1 Affinity Capture-RNA
ORC6 YHR118C Subunit of the origin recognition complex (ORC) genetic 1 1 1 Synthetic Lethality
PAH1 YMR165C Mg2+-dependent phosphatidate (PA) phosphatase physical 1 1 1 Affinity Capture-RNA
YML082W YML082W Putative protein predicted to have carbon-sulfur lyase activity physical 1 1 1 Affinity Capture-RNA
MCM1 YMR043W Transcription factor physical 1 1 1 Affinity Capture-RNA
SGV1 YPR161C Cyclin (Bur2p)-dependent protein kinase physical 1 1 1 Affinity Capture-RNA
IMP2 YMR035W Catalytic subunit of mitochondrial inner membrane peptidase complex physical 1 1 1 Affinity Capture-RNA
KDX1 YKL161C Protein kinase physical 1 1 1 Affinity Capture-RNA
POP3 YNL282W Subunit of both RNase MRP and nuclear RNase P physical 1 1 1 Affinity Capture-RNA
IRC3 YDR332W Double-stranded DNA-dependent helicase of the DExH/D-box family physical 1 1 1 Affinity Capture-RNA
TAF1 YGR274C TFIID subunit, involved in RNA pol II transcription initiation physical 1 1 1 Affinity Capture-RNA
TAF1 YGR274C TFIID subunit, involved in RNA pol II transcription initiation genetic 1 1 1 Synthetic Lethality
MTC5 YDR128W Subunit of SEACAT, a subcomplex of the SEA complex physical 1 1 1 Affinity Capture-RNA
KCS1 YDR017C Inositol hexakisphosphate and inositol heptakisphosphate kinase physical 1 1 1 Affinity Capture-RNA
YDR444W YDR444W Putative hydrolase acting on ester bonds physical 1 1 1 Affinity Capture-RNA
MRPL1 YDR116C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
CSA1 YPR174C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ECM38 YLR299W Gamma-glutamyltranspeptidase physical 1 1 1 Affinity Capture-RNA
SPG3 YDR504C Protein required for high temperature survival during stationary phase physical 1 1 1 Affinity Capture-RNA
RBS1 YDL189W Protein involved in assembly of the RNA Pol III complex physical 1 1 1 Affinity Capture-RNA
TPO1 YLL028W Polyamine transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
SOV1 YMR066W Mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
PTR3 YFR029W Component of the SPS plasma membrane amino acid sensor system physical 1 1 1 Affinity Capture-RNA
PPR1 YLR014C Zinc finger transcription factor physical 1 1 1 Affinity Capture-RNA
UTP6 YDR449C Nucleolar protein physical 1 1 1 Affinity Capture-RNA
LDB19 YOR322C Alpha-arrestin, Ub-ligase adaptor for Rsp5p physical 1 1 1 Affinity Capture-RNA
HNT2 YDR305C Dinucleoside triphosphate hydrolase physical 1 1 1 Affinity Capture-RNA
GTO1 YGR154C Omega-class glutathione transferase physical 1 1 1 Affinity Capture-RNA
FTH1 YBR207W Putative high affinity iron transporter physical 1 1 1 Affinity Capture-RNA
MCT1 YOR221C Predicted malonyl-CoA:ACP transferase physical 1 1 1 Affinity Capture-RNA
YTA6 YPL074W Putative ATPase of the CDC48/PAS1/SEC18 (AAA) family physical 1 1 1 Affinity Capture-RNA
PRY3 YJL078C GPI-anchored cell wall protein involved in export of sterols physical 1 1 1 Affinity Capture-RNA
YML119W YML119W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRPS9 YBR146W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
PRR1 YKL116C Serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
YHR210C YHR210C Putative aldose 1-epimerase superfamily protein physical 1 1 1 Affinity Capture-RNA
HRR25 YPL204W Conserved casein kinase, monopolin subunit physical 1 1 1 Affinity Capture-RNA
HRR25 YPL204W Conserved casein kinase, monopolin subunit genetic 1 1 1 Positive Genetic
LYS14 YDR034C Transcriptional activator involved in regulating lysine biosynthesis physical 1 1 1 Affinity Capture-RNA
LEU5 YHR002W Mitochondrial carrier protein physical 1 1 1 Affinity Capture-RNA
OSW7 YFR039C Protein involved in outer spore wall assembly physical 1 1 1 Affinity Capture-RNA
HNT3 YOR258W DNA 5' AMP hydrolase involved in DNA repair physical 1 1 1 Affinity Capture-RNA
RRP36 YOR287C Component of 90S preribosomes physical 1 1 1 Affinity Capture-RNA
MYO4 YAL029C Type V myosin motor involved in actin-based transport of cargos physical 1 1 1 Affinity Capture-RNA
PAM16 YJL104W Subunit of the import motor (PAM complex) physical 1 1 1 Affinity Capture-RNA
USV1 YPL230W Putative transcription factor containing a C2H2 zinc finger physical 1 1 1 Affinity Capture-RNA
NPR1 YNL183C Protein kinase physical 1 1 1 Affinity Capture-RNA
SKG3 YLR187W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MCM10 YIL150C Essential chromatin-associated protein physical 1 1 1 Affinity Capture-RNA
MCM10 YIL150C Essential chromatin-associated protein genetic 1 1 1 Positive Genetic
SMB1 YER029C Core Sm protein Sm B physical 1 1 1 Affinity Capture-RNA
MRX21 YPR011C Mitochondrial transporter physical 1 1 1 Affinity Capture-RNA
RSM28 YDR494W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
REX3 YLR107W RNA exonuclease physical 1 1 1 Affinity Capture-RNA
SLM4 YBR077C Subunit of the EGO/GSE complex physical 1 1 1 Affinity Capture-RNA
SAP30 YMR263W Component of Rpd3L histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
SAP30 YMR263W Component of Rpd3L histone deacetylase complex genetic 1 1 1 Synthetic Growth Defect
MYO3 YKL129C One of two type I myosins physical 1 1 1 Affinity Capture-RNA
NEJ1 YLR265C DNA end-binding protein required for nonhomologous end joining (NHEJ) physical 1 1 1 Affinity Capture-RNA
HSP78 YDR258C Oligomeric mitochondrial matrix chaperone physical 1 1 1 Affinity Capture-RNA
SLX9 YGR081C Protein required for pre-rRNA processing physical 1 1 1 Affinity Capture-RNA
MDG1 YNL173C Plasma membrane protein physical 1 1 1 Affinity Capture-RNA
NSL1 YPL233W Essential component of the MIND kinetochore complex physical 1 1 1 Affinity Capture-RNA
NSL1 YPL233W Essential component of the MIND kinetochore complex genetic 1 1 1 Positive Genetic
YET1 YKL065C Endoplasmic reticulum transmembrane protein physical 1 1 1 Affinity Capture-RNA
REB1 YBR049C RNA polymerase I enhancer binding protein physical 1 1 1 Affinity Capture-RNA
COX18 YGR062C Protein required for membrane insertion of C-terminus of Cox2p physical 1 1 1 Affinity Capture-RNA
PYK2 YOR347C Pyruvate kinase physical 1 1 1 Affinity Capture-RNA
MLP1 YKR095W Myosin-like protein associated with the nuclear envelope physical 1 1 1 Affinity Capture-RNA
OPY1 YBR129C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MNT3 YIL014W Alpha-1,3-mannosyltransferase physical 1 1 1 Affinity Capture-RNA
FIR1 YER032W Protein involved in 3' mRNA processing physical 1 1 1 Affinity Capture-RNA
PUS6 YGR169C tRNA:pseudouridine synthase physical 1 1 1 Affinity Capture-RNA
VPS72 YDR485C Htz1p-binding component of the SWR1 complex physical 1 1 1 Affinity Capture-RNA
FRE6 YLL051C Putative ferric reductase with similarity to Fre2p physical 1 1 1 Affinity Capture-RNA
SNX4 YJL036W Sorting nexin physical 1 1 1 Affinity Capture-RNA
VPS15 YBR097W Serine/threonine protein kinase involved in vacuolar protein sorting physical 1 1 1 Affinity Capture-RNA
DPC29 YGR021W Putative mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
PKH3 YDR466W Protein kinase with similarity to mammalian PDK1 and yeast Pkh1p/Phk2p physical 1 1 1 Affinity Capture-RNA
PSK2 YOL045W PAS-domain containing serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
MFT1 YML062C Subunit of the THO complex physical 1 1 1 Affinity Capture-RNA
MFT1 YML062C Subunit of the THO complex genetic 1 1 1 Synthetic Growth Defect
STP3 YLR375W Zinc-finger protein of unknown function physical 1 1 1 Affinity Capture-RNA
JAC1 YGL018C Specialized J-protein that functions in Fe-S cluster biogenesis physical 1 1 1 Affinity Capture-RNA
YDC1 YPL087W Alkaline dihydroceramidase, involved in sphingolipid metabolism physical 1 1 1 Affinity Capture-RNA
GEP5 YLR091W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
NNF2 YGR089W Protein that exhibits physical and genetic interactions with Rpb8p physical 1 1 1 Affinity Capture-RNA
SLS1 YLR139C Mitochondrial membrane protein physical 1 1 1 Affinity Capture-RNA
PPQ1 YPL179W Protein phosphatase that regulates the mating response physical 1 1 1 Affinity Capture-RNA
LCB5 YLR260W Minor sphingoid long-chain base kinase physical 1 1 1 Affinity Capture-RNA
ENV11 YGR071C Protein proposed to be involved in vacuolar functions physical 1 1 1 Affinity Capture-RNA
ROG3 YFR022W Alpha-arrestin involved in ubiquitin-dependent endocytosis physical 1 1 1 Affinity Capture-RNA
TGL3 YMR313C Bifunctional triacylglycerol lipase and LPE acyltransferase physical 1 1 1 Affinity Capture-RNA
RGT2 YDL138W Plasma membrane high glucose sensor that regulates glucose transport physical 1 1 1 Affinity Capture-RNA
YCR023C YCR023C Vacuolar membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRP17 YKL003C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
SND1 YDR186C Protein involved in SRP-independent targeting of substrates to the ER physical 1 1 1 Affinity Capture-RNA
YIL092W YIL092W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRX14 YDR115W Putative mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
HSP31 YDR533C Methylglyoxalase that converts methylglyoxal to D-lactate physical 1 1 1 Affinity Capture-RNA
YJL163C YJL163C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PEP7 YDR323C Adaptor protein involved in vesicle-mediated vacuolar protein sorting physical 1 1 1 Affinity Capture-RNA
PEP7 YDR323C Adaptor protein involved in vesicle-mediated vacuolar protein sorting genetic 1 1 1 Synthetic Lethality
KKQ8 YKL168C Putative serine/threonine protein kinase with unknown cellular role physical 1 1 1 Affinity Capture-RNA
FTR1 YER145C High affinity iron permease physical 1 1 1 Affinity Capture-RNA
FTR1 YER145C High affinity iron permease genetic 1 1 1 Dosage Growth Defect
PKC1 YBL105C Protein serine/threonine kinase physical 1 1 1 Affinity Capture-RNA
GEM1 YAL048C Outer mitochondrial membrane GTPase, subunit of the ERMES complex physical 1 1 1 Affinity Capture-RNA
PET54 YGR222W Mitochondrial inner membrane protein physical 1 1 1 Affinity Capture-RNA
GTS1 YGL181W Protein involved in Arf3p regulation and in transcription regulation physical 1 1 1 Affinity Capture-RNA
PAI3 YMR174C Cytoplasmic proteinase A (Pep4p) inhibitor physical 1 1 1 Affinity Capture-RNA
GYP6 YJL044C GTPase-activating protein (GAP) for yeast Rab family member Ypt6p physical 1 1 1 Affinity Capture-RNA
SNF8 YPL002C Component of the ESCRT-II complex physical 1 1 1 Affinity Capture-RNA
SNF8 YPL002C Component of the ESCRT-II complex genetic 1 1 1 Synthetic Lethality
TUL1 YKL034W Subunit of the DSC ubiquitin ligase complex physical 1 1 1 Affinity Capture-RNA
HAP2 YGL237C Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex physical 1 1 1 Affinity Capture-RNA
USB1 YLR132C Putative poly(U)-specific 3'-to-5' RNA exonuclease physical 1 1 1 Affinity Capture-RNA
HOS4 YIL112W Subunit of the Set3 complex physical 1 1 1 Affinity Capture-RNA
NEM1 YHR004C Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme physical 1 1 1 Affinity Capture-RNA
TRX3 YCR083W Mitochondrial thioredoxin physical 1 1 1 Affinity Capture-RNA
YPR096C YPR096C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
NUT2 YPR168W Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
RSM7 YJR113C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
SYM1 YLR251W Protein required for ethanol metabolism physical 1 1 1 Affinity Capture-RNA
DAD1 YDR016C Essential subunit of the Dam1 complex (aka DASH complex) physical 1 1 1 Affinity Capture-RNA
SKO1 YNL167C Basic leucine zipper transcription factor of the ATF/CREB family physical 1 1 1 Affinity Capture-RNA
SWI1 YPL016W Subunit of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
ISC1 YER019W Inositol phosphosphingolipid phospholipase C physical 1 1 1 Affinity Capture-RNA
VAC7 YNL054W Integral vacuolar membrane protein physical 1 1 1 Affinity Capture-RNA
MNN4 YKL201C Putative positive regulator of mannosylphosphate transferase Mnn6p physical 1 1 1 Affinity Capture-RNA
TFC3 YAL001C Subunit of RNA polymerase III transcription initiation factor complex physical 1 1 1 Affinity Capture-RNA
DSE1 YER124C Daughter cell-specific protein physical 1 1 1 Affinity Capture-RNA
MRPL19 YNL185C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
ZDS2 YML109W Protein with a role in regulating Swe1p-dependent polarized growth physical 1 1 1 Affinity Capture-RNA
COA4 YLR218C Twin Cx(9)C protein involved in cytochrome c oxidase organization physical 1 1 1 Affinity Capture-RNA
IZH4 YOL101C Membrane protein involved in zinc ion homeostasis physical 1 1 1 Affinity Capture-RNA
FMP23 YBR047W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MDM34 YGL219C Mitochondrial component of the ERMES complex physical 1 1 1 Affinity Capture-RNA
IDH2 YOR136W Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase physical 1 1 1 Affinity Capture-RNA
MYO1 YHR023W Type II myosin heavy chain physical 1 1 1 Affinity Capture-RNA
MSS116 YDR194C Mitochondrial transcription elongation factor physical 1 1 1 Affinity Capture-RNA
CMK1 YFR014C Calmodulin-dependent protein kinase physical 1 1 1 Affinity Capture-RNA
TFC8 YPL007C Subunit of RNA polymerase III transcription initiation factor complex physical 1 1 1 Affinity Capture-RNA
MRPS35 YGR165W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
PKH2 YOL100W Serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
DSE2 YHR143W Daughter cell-specific secreted protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
ROD1 YOR018W Alpha-arrestin involved in ubiquitin-dependent endocytosis physical 1 1 1 Affinity Capture-RNA
RTN2 YDL204W Reticulon protein physical 1 1 1 Affinity Capture-RNA
MAM3 YOL060C Protein involved in magnesium homeostasis physical 1 1 1 Affinity Capture-RNA
TFA1 YKL028W TFIIE large subunit physical 1 1 1 Affinity Capture-RNA
DEP1 YAL013W Component of the Rpd3L histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
SPO14 YKR031C Phospholipase D physical 1 1 1 Affinity Capture-RNA
CLB5 YPR120C B-type cyclin involved in DNA replication during S phase physical 1 1 1 Affinity Capture-RNA
SHH4 YLR164W Putative alternate subunit of succinate dehydrogenase (SDH) physical 1 1 1 Affinity Capture-RNA
SEC9 YGR009C t-SNARE protein required for secretory vesicle-plasma membrane fusion physical 1 1 1 Affinity Capture-RNA
SWF1 YDR126W Palmitoyltransferase that acts on transmembrane proteins physical 1 1 1 Affinity Capture-RNA
YPT11 YNL304W Rab GTPase physical 1 1 1 Affinity Capture-RNA
HIR2 YOR038C Subunit of HIR nucleosome assembly complex physical 1 1 1 Affinity Capture-RNA
HIR2 YOR038C Subunit of HIR nucleosome assembly complex genetic 1 1 1 Synthetic Growth Defect
CDC25 YLR310C Membrane bound guanine nucleotide exchange factor physical 1 1 1 Affinity Capture-RNA
PMP3 YDR276C Small plasma membrane protein physical 1 1 1 Affinity Capture-RNA
PMP3 YDR276C Small plasma membrane protein genetic 1 1 1 Negative Genetic
GIP4 YAL031C Cytoplasmic protein that regulates protein phosphatase 1 Glc7p physical 1 1 1 Affinity Capture-RNA
MMT2 YPL224C Putative metal transporter involved in mitochondrial iron accumulation physical 1 1 1 Affinity Capture-RNA
RIM101 YHL027W Cys2His2 zinc-finger transcriptional repressor physical 1 1 1 Affinity Capture-RNA
RAD52 YML032C Protein involved in homologous recombination physical 1 1 1 Affinity Capture-RNA
MRP49 YKL167C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
ISU2 YOR226C Mitochondrial protein required for iron-sulfur protein synthesis physical 1 1 1 Affinity Capture-RNA
SLI1 YGR212W N-acetyltransferase physical 1 1 1 Affinity Capture-RNA
PDP3 YLR455W Component of the NuA3b histone acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
YPK2 YMR104C AGC-type S/T protein kinase physical 1 1 1 Affinity Capture-RNA
HSM3 YBR272C Evolutionarily conserved 19S regulatory particle assembly-chaperone physical 1 1 1 Affinity Capture-RNA
NAM9 YNL137C Mitochondrial ribosomal component of the small subunit physical 1 1 1 Affinity Capture-RNA
LCD1 YDR499W Essential protein required for the DNA integrity checkpoint pathways physical 1 1 1 Affinity Capture-RNA
ERV2 YPR037C Flavin-linked sulfhydryl oxidase localized to the ER lumen physical 1 1 1 Affinity Capture-RNA
CDC23 YHR166C Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) physical 1 1 1 Affinity Capture-RNA
PDR5 YOR153W Plasma membrane ATP-binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
SKI7 YOR076C GTP-binding protein that couples the Ski complex and exosome physical 1 1 1 Affinity Capture-RNA
JSN1 YJR091C Member of the Puf family of RNA-binding proteins physical 1 1 1 Affinity Capture-RNA
VMS1 YDR049W Peptidyl-tRNA hydrolase that releases stalled peptides from ribosomes, physical 1 1 1 Affinity Capture-RNA
NRM1 YNR009W Transcriptional co-repressor of MBF-regulated gene expression physical 1 1 1 Affinity Capture-RNA
SNF2 YOR290C Catalytic subunit of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
PIB1 YDR313C RING-type ubiquitin ligase of the endosomal and vacuolar membranes physical 1 1 1 Affinity Capture-RNA
SAS3 YBL052C Histone acetyltransferase catalytic subunit of NuA3 complex physical 1 1 1 Affinity Capture-RNA
RAD14 YMR201C Subunit of Nucleotide Excision Repair Factor 1 (NEF1) physical 1 1 1 Affinity Capture-RNA
DPB3 YBR278W Third-largest subunit of DNA polymerase II (DNA polymerase epsilon) physical 1 1 1 Affinity Capture-RNA
CUE3 YGL110C Subunit of ribosome-associated quality control trigger complex (RQT) physical 1 1 1 Affinity Capture-RNA
YEL067C YEL067C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PPZ1 YML016C Serine/threonine protein phosphatase Z, isoform of Ppz2p physical 1 1 1 Affinity Capture-RNA
CYK3 YDL117W SH3-domain protein located in the bud neck and cytokinetic actin ring physical 1 1 1 Affinity Capture-RNA
ODC1 YPL134C Mitochondrial inner membrane transporter physical 1 1 1 Affinity Capture-RNA
TES1 YJR019C Peroxisomal acyl-CoA thioesterase physical 1 1 1 Affinity Capture-RNA
SKY1 YMR216C SR protein kinase (SRPK) physical 1 1 1 Affinity Capture-RNA
CYT2 YKL087C Cytochrome c1 heme lyase physical 1 1 1 Affinity Capture-RNA
LTE1 YAL024C Protein similar to GDP/GTP exchange factors physical 1 1 1 Affinity Capture-RNA
RSM22 YKL155C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
CWC2 YDL209C Member of the NineTeen Complex (NTC) physical 1 1 1 Affinity Capture-RNA
YOX1 YML027W Homeobox transcriptional repressor physical 1 1 1 Affinity Capture-RNA
YCL002C YCL002C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MGP12 YDR286C Mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
YJL132W YJL132W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RSM24 YDR175C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
FHN1 YGR131W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YPL113C YPL113C Glyoxylate reductase physical 1 1 1 Affinity Capture-RNA
HEH2 YDR458C Inner nuclear membrane (INM) protein physical 1 1 1 Affinity Capture-RNA
FRK1 YPL141C Protein kinase of unknown cellular role physical 1 1 1 Affinity Capture-RNA
MIA40 YKL195W Import and assembly protein in mitochondrial intermembrane space physical 1 1 1 Affinity Capture-RNA
YDR109C YDR109C D-ribulokinase physical 1 1 1 Affinity Capture-RNA
MRX10 YDR282C Mitochondrial inner membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
KCH1 YJR054W Potassium transporter that mediates K+ influx physical 1 1 1 Affinity Capture-RNA
YGL108C YGL108C Protein of unknown function, predicted to be palmitoylated physical 1 1 1 Affinity Capture-RNA
MIP1 YOR330C Mitochondrial DNA polymerase gamma physical 1 1 1 Affinity Capture-RNA
MFM1 YPL060W Mitochondrial inner membrane magnesium transporter physical 1 1 1 Affinity Capture-RNA
ISR1 YPR106W Predicted protein kinase physical 1 1 1 Affinity Capture-RNA
STB4 YMR019W Putative transcription factor physical 1 1 1 Affinity Capture-RNA
CHM7 YJL049W Yeast homolog of human CHMP7, localizes to the endoplasmic reticulum physical 1 1 1 Affinity Capture-RNA
RAD1 YPL022W Single-stranded DNA endonuclease (with Rad10p) physical 1 1 1 Affinity Capture-RNA
DAS1 YJL149W Putative SCF ubiquitin ligase F-box protein physical 1 1 1 Affinity Capture-RNA
OM14 YBR230C Mitochondrial outer membrane receptor for cytosolic ribosomes physical 1 1 1 Affinity Capture-RNA
MRPL7 YDR237W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
RIT1 YMR283C Initiator methionine 2'-O-ribosyl phosphate transferase physical 1 1 1 Affinity Capture-RNA
SPC3 YLR066W Subunit of signal peptidase complex physical 1 1 1 Affinity Capture-RNA
CKB2 YOR039W Beta' regulatory subunit of casein kinase 2 (CK2) physical 1 1 1 Affinity Capture-RNA
CKB2 YOR039W Beta' regulatory subunit of casein kinase 2 (CK2) genetic 1 1 1 Negative Genetic
INP54 YOL065C Phosphatidylinositol 4,5-bisphosphate 5-phosphatase physical 1 1 1 Affinity Capture-RNA
NOP19 YGR251W Ribosome biogenesis factor physical 1 1 1 Affinity Capture-RNA
CMC1 YKL137W Copper-binding protein of the mitochondrial intermembrane space physical 1 1 1 Affinity Capture-RNA
GMC1 YDR506C Protein involved in meiotic progression physical 1 1 1 Affinity Capture-RNA
YDR061W YDR061W Protein with similarity to ABC transporter family members physical 1 1 1 Affinity Capture-RNA
SWT1 YOR166C RNA endoribonuclease involved in perinuclear mRNP quality control physical 1 1 1 Affinity Capture-RNA
TAO3 YIL129C Component of the RAM signaling network physical 1 1 1 Affinity Capture-RNA
PEX12 YMR026C C3HC4-type RING-finger peroxin and E3 ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
NMA111 YNL123W Serine protease and general molecular chaperone physical 1 1 1 Affinity Capture-RNA
PRP2 YNR011C RNA-dependent DExD/H-box ATPase physical 1 1 1 Affinity Capture-RNA
PPE1 YHR075C Protein with carboxyl methyl esterase activity physical 1 1 1 Affinity Capture-RNA
NUP84 YDL116W Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
YPP1 YGR198W Cargo-transport protein involved in endocytosis physical 1 1 1 Affinity Capture-RNA
HAP1 YLR256W Zinc finger transcription factor physical 1 1 1 Affinity Capture-RNA
MDJ2 YNL328C Constituent of the mitochondrial import motor physical 1 1 1 Affinity Capture-RNA
SEC5 YDR166C Essential 107kDa subunit of the exocyst complex physical 1 1 1 Affinity Capture-RNA
YDR210W YDR210W Predicted tail-anchored plasma membrane protein physical 1 1 1 Affinity Capture-RNA
MMS1 YPR164W Subunit of E3 ubiquitin ligase complex involved in replication repair physical 1 1 1 Affinity Capture-RNA
DOA4 YDR069C Ubiquitin hydrolase physical 1 1 1 Affinity Capture-RNA
PSR1 YLL010C Plasma membrane-associated protein phosphatase physical 1 1 1 Affinity Capture-RNA
VPS54 YDR027C Component of the GARP (Golgi-associated retrograde protein) complex physical 1 1 1 Affinity Capture-RNA
HTA1 YDR225W Histone H2A physical 1 1 1 Affinity Capture-RNA
SQS1 YNL224C Protein that stimulates the ATPase and helicase activities of Prp43p physical 1 1 1 Affinity Capture-RNA
PSK1 YAL017W PAS domain-containing serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
UFD4 YKL010C Ubiquitin-protein ligase (E3) physical 1 1 1 Affinity Capture-RNA
MNR2 YKL064W Vacuolar membrane protein required for magnesium homeostasis physical 1 1 1 Affinity Capture-RNA
SKT5 YBL061C Activator of Chs3p (chitin synthase III) during vegetative growth physical 1 1 1 Affinity Capture-RNA
TAZ1 YPR140W Lyso-phosphatidylcholine acyltransferase physical 1 1 1 Affinity Capture-RNA
RSO55 YLR281C Mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
PGS1 YCL004W Phosphatidylglycerolphosphate synthase physical 1 1 1 Affinity Capture-RNA
GAL11 YOL051W Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
GAL11 YOL051W Subunit of the RNA polymerase II mediator complex genetic 1 1 1 Synthetic Lethality
PEX7 YDR142C Peroxisomal signal receptor for peroxisomal matrix proteins physical 1 1 1 Affinity Capture-RNA
PET112 YBL080C Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex physical 1 1 1 Affinity Capture-RNA
PBP2 YBR233W RNA binding protein physical 1 1 1 Affinity Capture-RNA
OM45 YIL136W Mitochondrial outer membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
MGA2 YIR033W ER membrane protein involved in regulation of OLE1 transcription physical 1 1 1 Affinity Capture-RNA
MSC1 YML128C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
GPR1 YDL035C Plasma membrane G protein coupled receptor (GPCR) physical 1 1 1 Affinity Capture-RNA
MRPL11 YDL202W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
EAF6 YJR082C Subunit of the NuA4 acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
KIP1 YBL063W Kinesin-related motor protein physical 1 1 1 Affinity Capture-RNA
SRO77 YBL106C Protein with roles in exocytosis and cation homeostasis physical 1 1 1 Affinity Capture-RNA
CHS6 YJL099W Member of the ChAPs (Chs5p-Arf1p-binding proteins) family physical 1 1 1 Affinity Capture-RNA
MSR1 YHR091C Mitochondrial arginyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
CLB3 YDL155W B-type cyclin involved in cell cycle progression physical 1 1 1 Affinity Capture-RNA
HHF2 YNL030W Histone H4 physical 1 1 1 Affinity Capture-RNA
PRI2 YKL045W Subunit of DNA primase physical 1 1 1 Affinity Capture-RNA
FBP26 YJL155C Fructose-2,6-bisphosphatase, required for glucose metabolism physical 1 1 1 Affinity Capture-RNA
TAX4 YJL083W EH domain-containing protein physical 1 1 1 Affinity Capture-RNA
MPM1 YJL066C Mitochondrial intermembrane space protein of unknown function physical 1 1 1 Affinity Capture-RNA
LIP2 YLR239C Lipoyl ligase physical 1 1 1 Affinity Capture-RNA
GCV3 YAL044C H subunit of the mitochondrial glycine decarboxylase complex physical 1 1 1 Affinity Capture-RNA
OAF3 YKR064W Putative transcriptional repressor with Zn(2)-Cys(6) finger physical 1 1 1 Affinity Capture-RNA
SEC17 YBL050W Alpha-SNAP cochaperone physical 1 1 1 Affinity Capture-RNA
NST1 YNL091W Translational inhibitor and suppressor of proteasome-assembly defects physical 1 1 1 Affinity Capture-RNA
SEF1 YBL066C Putative transcription factor physical 1 1 1 Affinity Capture-RNA
MTW1 YAL034W-A Essential component of the MIND kinetochore complex physical 1 1 1 Affinity Capture-RNA
SNL1 YIL016W Ribosome-associated protein physical 1 1 1 Affinity Capture-RNA
TCO89 YPL180W Subunit of TORC1 (Tor1p or Tor2p-Kog1p-Lst8p-Tco89p) physical 1 1 1 Affinity Capture-RNA
INP2 YMR163C Peroxisome-specific receptor important for peroxisome inheritance physical 1 1 1 Affinity Capture-RNA
RMD5 YDR255C Component of GID Complex that confers ubiquitin ligase (U3) activity physical 1 1 1 Affinity Capture-RNA
CTL1 YMR180C RNA 5'-triphosphatase, localizes to both the nucleus and cytoplasm physical 1 1 1 Affinity Capture-RNA
RER2 YBR002C Forms the dehydrodolichyl diphosphate synthase (DDS) complex with NUS1 physical 1 1 1 Affinity Capture-RNA
HDA2 YDR295C Subunit of HDA1 histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
YRO2 YBR054W Protein with a putative role in response to acid stress physical 1 1 1 Affinity Capture-RNA
GDB1 YPR184W Glycogen debranching enzyme physical 1 1 1 Affinity Capture-RNA
FZO1 YBR179C Mitofusin, protein involved in mitochondrial outer membrane fusion physical 1 1 1 Affinity Capture-RNA
CLB1 YGR108W B-type cyclin involved in cell cycle progression physical 1 1 1 Affinity Capture-RNA
YJR149W YJR149W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YPL216W YPL216W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
WHI3 YNL197C RNA binding protein that modulates mRNA stability physical 1 1 1 Affinity Capture-RNA
GPM2 YDL021W Nonfunctional homolog of Gpm1p phosphoglycerate mutase physical 1 1 1 Affinity Capture-RNA
YKE2 YLR200W Subunit of the heterohexameric Gim/prefoldin protein complex physical 1 1 1 Affinity Capture-RNA
MGL2 YMR210W Monoacylglycerol and triacylglycerol lipase physical 1 1 1 Affinity Capture-RNA
MSC3 YLR219W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YBR071W YBR071W Protein of unknown function found in the cytoplasm and bud neck physical 1 1 1 Affinity Capture-RNA
NSI1 YDR026C RNA polymerase I termination factor physical 1 1 1 Affinity Capture-RNA
PCL8 YPL219W Cyclin physical 1 1 1 Affinity Capture-RNA
ENB1 YOL158C Ferric enterobactin transmembrane transporter physical 1 1 1 Affinity Capture-RNA
MSS4 YDR208W Phosphatidylinositol-4-phosphate 5-kinase physical 1 1 1 Affinity Capture-RNA
MFG1 YDL233W Regulator of filamentous growth physical 1 1 1 Affinity Capture-RNA
NPP1 YCR026C Nucleotide pyrophosphatase/phosphodiesterase physical 1 1 1 Affinity Capture-RNA
MRPL27 YBR282W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
CLB4 YLR210W B-type cyclin involved in cell cycle progression physical 1 1 1 Affinity Capture-RNA
PXA2 YKL188C Subunit of heterodimeric peroxisomal ABC transport complex, with Pxa1p physical 1 1 1 Affinity Capture-RNA
EDC1 YGL222C RNA-binding protein that activates mRNA decapping directly physical 1 1 1 Affinity Capture-RNA
NNK1 YKL171W Protein kinase physical 1 1 1 Affinity Capture-RNA
YPL247C YPL247C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
XDJ1 YLR090W Chaperone with a role in facilitating mitochondrial protein import physical 1 1 1 Affinity Capture-RNA
NNF1 YJR112W Essential component of the outer kinetochore MIND complex physical 1 1 1 Affinity Capture-RNA
PRK1 YIL095W Ser/Thr protein kinase physical 1 1 1 Affinity Capture-RNA
YML037C YML037C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
NBP1 YLR457C Spindle pole body (SPB) component physical 1 1 1 Affinity Capture-RNA
DIN7 YDR263C Mitochondrial nuclease functioning in DNA repair and replication physical 1 1 1 Affinity Capture-RNA
RMD8 YFR048W Cytosolic protein required for sporulation physical 1 1 1 Affinity Capture-RNA
RMD8 YFR048W Cytosolic protein required for sporulation genetic 1 1 1 Synthetic Growth Defect
EST3 YIL009C-A Component of the telomerase holoenzyme physical 1 1 1 Affinity Capture-RNA
YRM1 YOR172W Zinc finger transcription factor involved in multidrug resistance physical 1 1 1 Affinity Capture-RNA
ELF1 YKL160W Transcription elongation factor with a conserved zinc finger domain physical 1 1 1 Affinity Capture-RNA
YMD8 YML038C Putative nucleotide sugar transporter physical 1 1 1 Affinity Capture-RNA
TOS2 YGR221C Protein involved in localization of Cdc24p to the site of bud growth physical 1 1 1 Affinity Capture-RNA
VHS3 YOR054C Negative regulatory subunit of protein phosphatase 1 Ppz1p physical 1 1 1 Affinity Capture-RNA
CSH1 YBR161W Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit physical 1 1 1 Affinity Capture-RNA
PTP1 YDL230W Phosphotyrosine-specific protein phosphatase physical 1 1 1 Affinity Capture-RNA
PUN1 YLR414C Plasma membrane protein with a role in cell wall integrity physical 1 1 1 Affinity Capture-RNA
JHD1 YER051W JmjC domain family histone demethylase specific for H3-K36 physical 1 1 1 Affinity Capture-RNA
MET28 YIR017C bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex physical 1 1 1 Affinity Capture-RNA
KHA1 YJL094C Putative K+/H+ antiporter physical 1 1 1 Affinity Capture-RNA
RCH1 YMR034C Negative regulator of cytosolic calcium homeostasis physical 1 1 1 Affinity Capture-RNA
CSE4 YKL049C Centromeric histone H3-like protein physical 1 1 1 Affinity Capture-RNA
REF2 YDR195W RNA-binding protein physical 1 1 1 Affinity Capture-RNA
VRG4 YGL225W Golgi GDP-mannose transporter physical 1 1 1 Affinity Capture-RNA
YPL039W YPL039W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YAF9 YNL107W Subunit of NuA4 histone H4 acetyltransferase and SWR1 complexes physical 1 1 1 Affinity Capture-RNA
YAF9 YNL107W Subunit of NuA4 histone H4 acetyltransferase and SWR1 complexes genetic 1 1 1 Synthetic Growth Defect
MSK1 YNL073W Mitochondrial lysine-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
PTC6 YCR079W Mitochondrial type 2C protein phosphatase (PP2C) physical 1 1 1 Affinity Capture-RNA
RRG1 YDR065W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RRG1 YDR065W Protein of unknown function genetic 1 1 1 Synthetic Growth Defect
DPI34 YOR114W Putative mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
PIP2 YOR363C Autoregulatory, oleate-activated transcription factor physical 1 1 1 Affinity Capture-RNA
RTC3 YHR087W Protein of unknown function involved in RNA metabolism physical 1 1 1 Affinity Capture-RNA
RAD30 YDR419W DNA polymerase eta physical 1 1 1 Affinity Capture-RNA
MRPL36 YBR122C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
SWI3 YJL176C Subunit of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
TDA9 YML081W Transcription factor that regulates acetate production physical 1 1 1 Affinity Capture-RNA
YJL107C YJL107C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SMC6 YLR383W Subunit of the SMC5-SMC6 complex physical 1 1 1 Affinity Capture-RNA
SLI15 YBR156C Subunit of the conserved chromosomal passenger complex (CPC) physical 1 1 1 Affinity Capture-RNA
YFH7 YFR007W Putative kinase with similarity to the PRK/URK/PANK kinase subfamily physical 1 1 1 Affinity Capture-RNA
FMP25 YLR077W Protein required for assembly of respiratory complex III physical 1 1 1 Affinity Capture-RNA
KIP2 YPL155C Kinesin-related motor protein involved in mitotic spindle positioning physical 1 1 1 Affinity Capture-RNA
RAD34 YDR314C Protein involved in nucleotide excision repair (NER) physical 1 1 1 Affinity Capture-RNA
CIN4 YMR138W GTP-binding protein involved in beta-tubulin (Tub2p) folding physical 1 1 1 Affinity Capture-RNA
NIT1 YIL164C Nitrilase physical 1 1 1 Affinity Capture-RNA
HER2 YMR293C Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex physical 1 1 1 Affinity Capture-RNA
GRR1 YJR090C F-box protein component of an SCF ubiquitin-ligase complex physical 1 1 1 Affinity Capture-RNA
YPL191C YPL191C K48-specific deubiquitinating (DUB) enzyme physical 1 1 1 Affinity Capture-RNA
YBR238C YBR238C Mitochondrial membrane protein physical 1 1 1 Affinity Capture-RNA
YBL081W YBL081W Non-essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
CDC40 YDR364C Pre-mRNA splicing factor physical 1 1 1 Affinity Capture-RNA
GEP7 YGL057C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
NFI1 YOR156C SUMO E3 ligase physical 1 1 1 Affinity Capture-RNA
THP2 YHR167W Subunit of the THO and TREX complexes physical 1 1 1 Affinity Capture-RNA
THP2 YHR167W Subunit of the THO and TREX complexes genetic 1 1 1 Synthetic Lethality
COQ11 YLR290C Putative oxidoreductase, subunit of Coenzyme Q biosynthetic complexes physical 1 1 1 Affinity Capture-RNA
DUF1 YOL087C Ubiquitin-binding protein of unknown function physical 1 1 1 Affinity Capture-RNA
TEA1 YOR337W Ty1 enhancer activator involved in Ty enhancer-mediated transcription physical 1 1 1 Affinity Capture-RNA
EKI1 YDR147W Ethanolamine kinase physical 1 1 1 Affinity Capture-RNA
ELA1 YNL230C Elongin A physical 1 1 1 Affinity Capture-RNA
NTH2 YBR001C Putative neutral trehalase, required for thermotolerance physical 1 1 1 Affinity Capture-RNA
FMP46 YKR049C Putative redox protein containing a thioredoxin fold physical 1 1 1 Affinity Capture-RNA
MLO1 YMR252C Mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
COX11 YPL132W Protein required for delivery of copper to Cox1p physical 1 1 1 Affinity Capture-RNA
FAR10 YLR238W Protein involved in recovery from arrest in response to pheromone physical 1 1 1 Affinity Capture-RNA
YJR011C YJR011C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YJR011C YJR011C Putative protein of unknown function genetic 1 1 1 Positive Genetic
UFE1 YOR075W t-SNARE protein required for retrograde vesicular traffic physical 1 1 1 Affinity Capture-RNA
SWD3 YBR175W Essential subunit of the COMPASS (Set1C) complex physical 1 1 1 Affinity Capture-RNA
SRB8 YCR081W Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
NGG1 YDR176W Subunit of chromatin modifying histone acetyltransferase complexes physical 1 1 1 Affinity Capture-RNA
WHI5 YOR083W Repressor of G1 transcription physical 1 1 1 Affinity Capture-RNA
SUV3 YPL029W ATP-dependent RNA helicase physical 1 1 1 Affinity Capture-RNA
UGA3 YDL170W Transcriptional activator for GABA-dependent induction of GABA genes physical 1 1 1 Affinity Capture-RNA
RPN4 YDL020C Transcription factor that stimulates expression of proteasome genes physical 1 1 1 Affinity Capture-RNA
YPT35 YHR105W Endosomal protein of unknown function physical 1 1 1 Affinity Capture-RNA
MTR2 YKL186C mRNA transport regulator physical 1 1 1 Affinity Capture-RNA
MRP20 YDR405W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
RPM2 YML091C Protein subunit of mitochondrial RNase P physical 1 1 1 Affinity Capture-RNA
PCA1 YBR295W Cadmium transporting P-type ATPase physical 1 1 1 Affinity Capture-RNA
SOK2 YMR016C Nuclear protein that negatively regulates pseudohyphal differentiation physical 1 1 1 Affinity Capture-RNA
OPI1 YHL020C Transcriptional regulator of a variety of genes physical 1 1 1 Affinity Capture-RNA
RRF1 YHR038W Mitochondrial ribosome recycling factor physical 1 1 1 Affinity Capture-RNA
MRX6 YNL295W Mitochondrial ribosome-associated protein physical 1 1 1 Affinity Capture-RNA
ETP1 YHL010C Protein of unknown function required for growth on ethanol physical 1 1 1 Affinity Capture-RNA
MIL1 YFL034W Predicted lipase physical 1 1 1 Affinity Capture-RNA
PDE1 YGL248W Low-affinity cyclic AMP phosphodiesterase physical 1 1 1 Affinity Capture-RNA
MSB3 YNL293W Rab GTPase-activating protein physical 1 1 1 Affinity Capture-RNA
ZRG8 YER033C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
CRZ1 YNL027W Transcription factor, activates transcription of stress response genes physical 1 1 1 Affinity Capture-RNA
CLN1 YMR199W G1 cyclin involved in regulation of the cell cycle physical 1 1 1 Affinity Capture-RNA
FIP1 YJR093C Subunit of cleavage polyadenylation factor (CPF) physical 1 1 1 Affinity Capture-RNA
CIK1 YMR198W Kinesin-associated protein physical 1 1 1 Affinity Capture-RNA
CIK1 YMR198W Kinesin-associated protein genetic 1 1 1 Synthetic Lethality
CNM67 YNL225C Component of the spindle pole body outer plaque physical 1 1 1 Affinity Capture-RNA
NOP53 YPL146C Nucleolar protein physical 1 1 1 Affinity Capture-RNA
MDM36 YPR083W Mitochondrial protein physical 1 1 1 Affinity Capture-RNA
RLF2 YPR018W Largest subunit (p90) of the Chromatin Assembly Complex (CAF-1) physical 1 1 1 Affinity Capture-RNA
LRE1 YCL051W Protein involved in control of cell wall structure and stress response physical 1 1 1 Affinity Capture-RNA
RAD9 YDR217C DNA damage-dependent checkpoint protein physical 1 1 1 Affinity Capture-RNA
TMA23 YMR269W Nucleolar protein implicated in ribosome biogenesis physical 1 1 1 Affinity Capture-RNA
NSE1 YLR007W Component of the SMC5-SMC6 complex physical 1 1 1 Affinity Capture-RNA
TLG2 YOL018C Syntaxin-like t-SNARE physical 1 1 1 Affinity Capture-RNA
MTC3 YGL226W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MED4 YOR174W Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
RSF2 YJR127C Zinc-finger protein physical 1 1 1 Affinity Capture-RNA
GIC2 YDR309C Rho-family GTPase interacting protein and Cdc42p effector physical 1 1 1 Affinity Capture-RNA
CDC45 YLR103C DNA replication initiation factor physical 1 1 1 Affinity Capture-RNA
IOC4 YMR044W Member of a complex (Isw1b) with Isw1p and Ioc2p physical 1 1 1 Affinity Capture-RNA
WHI4 YDL224C Putative RNA binding protein physical 1 1 1 Affinity Capture-RNA
YKR011C YKR011C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
HAP4 YKL109W Transcription factor physical 1 1 1 Affinity Capture-RNA
URA10 YMR271C Minor orotate phosphoribosyltransferase (OPRTase) isozyme physical 1 1 1 Affinity Capture-RNA
HUA2 YOR284W Cytoplasmic protein of unknown function physical 1 1 1 Affinity Capture-RNA
CST6 YIL036W Basic leucine zipper (bZIP) transcription factor from ATF/CREB family physical 1 1 1 Affinity Capture-RNA
UTP23 YOR004W Component of the small subunit processome physical 1 1 1 Affinity Capture-RNA
EMA17 YIL029C Protein involved in targeting mitochondrial membrane protein precursor physical 1 1 1 Affinity Capture-RNA
SCO1 YBR037C Copper-binding protein of mitochondrial inner membrane physical 1 1 1 Affinity Capture-RNA
ZRG17 YNR039C Endoplasmic reticulum zinc transporter physical 1 1 1 Affinity Capture-RNA
SIR4 YDR227W SIR protein involved in assembly of silent chromatin domains physical 1 1 1 Affinity Capture-RNA
MRE11 YMR224C Nuclease subunit of the MRX complex with Rad50p and Xrs2p physical 1 1 1 Affinity Capture-RNA
PBP4 YDL053C Pbp1p binding protein physical 1 1 1 Affinity Capture-RNA
PEX3 YDR329C Peroxisomal membrane protein (PMP) physical 1 1 1 Affinity Capture-RNA
YDL211C YDL211C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
COM2 YER130C Transcription factor that binds IME1 Upstream Activation Signal (UAS) physical 1 1 1 Affinity Capture-RNA
MDM31 YHR194W Mitochondrial protein that may have a role in phospholipid metabolism physical 1 1 1 Affinity Capture-RNA
YKL162C YKL162C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
ERG29 YMR134W Protein of unknown function involved in ergosterol biosynthesis physical 1 1 1 Affinity Capture-RNA
UBI4 YLL039C Ubiquitin physical 1 1 1 Affinity Capture-RNA
YRR1 YOR162C Zn2-Cys6 zinc-finger transcription factor physical 1 1 1 Affinity Capture-RNA
UPS3 YDR185C Mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
ECM9 YKR004C Non-essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
YOR302W YOR302W CPA1 uORF physical 1 1 1 Affinity Capture-RNA
LSB5 YCL034W Protein involved in membrane-trafficking events at plasma membrane physical 1 1 1 Affinity Capture-RNA
SHY1 YGR112W Mitochondrial inner membrane protein required for complex IV assembly physical 1 1 1 Affinity Capture-RNA
DGR2 YKL121W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YCT1 YLL055W High-affinity cysteine-specific transporter physical 1 1 1 Affinity Capture-RNA
MDM10 YAL010C Subunit of both the ERMES and the SAM complex physical 1 1 1 Affinity Capture-RNA
YGR237C YGR237C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
CMR3 YPR013C Putative zinc finger protein physical 1 1 1 Affinity Capture-RNA
STE11 YLR362W Signal transducing MEK kinase physical 1 1 1 Affinity Capture-RNA
OKP1 YGR179C Outer kinetochore protein required for accurate chromosome segregation physical 1 1 1 Affinity Capture-RNA
ROM2 YLR371W Guanine nucleotide exchange factor (GEF) for Rho1p and Rho2p physical 1 1 1 Affinity Capture-RNA
SLD3 YGL113W Protein involved in the initiation of DNA replication physical 1 1 1 Affinity Capture-RNA
YDR262W YDR262W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YNG1 YOR064C Subunit of the NuA3 histone acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
SFL1 YOR140W Transcriptional repressor and activator physical 1 1 1 Affinity Capture-RNA
IFH1 YLR223C Coactivator, regulates transcription of ribosomal protein (RP) genes physical 1 1 1 Affinity Capture-RNA
MTM1 YGR257C Mitochondrial protein of the mitochondrial carrier family physical 1 1 1 Affinity Capture-RNA
RQT4 YKR023W Subunit of ribosome-associated quality control trigger complex (RQT) physical 1 1 1 Affinity Capture-RNA
EGH1 YIR007W Steryl-beta-glucosidase with broad specificity for aglycones physical 1 1 1 Affinity Capture-RNA
CLF1 YLR117C Member of the NineTeen Complex (NTC) physical 1 1 1 Affinity Capture-RNA
CLF1 YLR117C Member of the NineTeen Complex (NTC) genetic 1 1 1 Negative Genetic
YCK3 YER123W Palmitoylated vacuolar membrane-localized casein kinase I isoform physical 1 1 1 Affinity Capture-RNA
RIM11 YMR139W Protein kinase physical 1 1 1 Affinity Capture-RNA
LAS1 YKR063C Endonuclease involved in pre-rRNA processing at both ends of ITS2 physical 1 1 1 Affinity Capture-RNA
DID4 YKL002W Class E Vps protein of the ESCRT-III complex physical 1 1 1 Affinity Capture-RNA
DID4 YKL002W Class E Vps protein of the ESCRT-III complex genetic 1 1 1 Synthetic Growth Defect
MLH2 YLR035C Protein involved in mismatch repair and meiotic recombination physical 1 1 1 Affinity Capture-RNA
VAC17 YCL063W Phosphoprotein involved in vacuole inheritance physical 1 1 1 Affinity Capture-RNA
SNF5 YBR289W Subunit of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
PHR1 YOR386W DNA photolyase involved in photoreactivation physical 1 1 1 Affinity Capture-RNA
RRG7 YOR305W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PET309 YLR067C Specific translational activator for the COX1 mRNA physical 1 1 1 Affinity Capture-RNA
TOK1 YJL093C Outward-rectifier potassium channel of the plasma membrane physical 1 1 1 Affinity Capture-RNA
FAR3 YMR052W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
DDC1 YPL194W DNA damage checkpoint protein physical 1 1 1 Affinity Capture-RNA
MGS1 YNL218W Protein with DNA-dependent ATPase and ssDNA annealing activities physical 1 1 1 Affinity Capture-RNA
STE50 YCL032W Adaptor protein for various signaling pathways physical 1 1 1 Affinity Capture-RNA
RHO5 YNL180C Non-essential small GTPase of the Rho/Rac family of Ras-like proteins physical 1 1 1 Affinity Capture-RNA
SNF11 YDR073W Subunit of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
SEN15 YMR059W Subunit of the tRNA splicing endonuclease physical 1 1 1 Affinity Capture-RNA
POL32 YJR043C Third subunit of DNA polymerase delta physical 1 1 1 Affinity Capture-RNA
POL32 YJR043C Third subunit of DNA polymerase delta genetic 1 1 1 Synthetic Growth Defect
IGD1 YFR017C Cytoplasmic protein that inhibits Gdb1p glycogen debranching activity physical 1 1 1 Affinity Capture-RNA
TOS3 YGL179C Protein kinase physical 1 1 1 Affinity Capture-RNA
YGL185C YGL185C Putative protein with sequence similar to hydroxyacid dehydrogenases physical 1 1 1 Affinity Capture-RNA
YIL152W YIL152W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
TPP1 YMR156C DNA 3'-phosphatase physical 1 1 1 Affinity Capture-RNA
FET4 YMR319C Low-affinity Fe(II) transporter of the plasma membrane physical 1 1 1 Affinity Capture-RNA
SIP5 YMR140W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
CHL4 YDR254W Outer kinetochore protein required for chromosome stability physical 1 1 1 Affinity Capture-RNA
PML39 YML107C Protein required for nuclear retention of unspliced pre-mRNAs physical 1 1 1 Affinity Capture-RNA
RAD28 YDR030C Protein involved in DNA repair physical 1 1 1 Affinity Capture-RNA
MSD1 YPL104W Mitochondrial aspartyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
YAR028W YAR028W Putative integral membrane protein physical 1 1 1 Affinity Capture-RNA
SDH7 YDR511W Mitochondrial protein involved in assembly of succinate dehydrogenase physical 1 1 1 Affinity Capture-RNA
LRP1 YHR081W Nuclear exosome-associated nucleic acid binding protein physical 1 1 1 Affinity Capture-RNA
KAR9 YPL269W Spindle positioning factor physical 1 1 1 Affinity Capture-RNA
STF2 YGR008C Protein involved in resistance to desiccation stress physical 1 1 1 Affinity Capture-RNA
NVJ1 YHR195W Nuclear envelope protein physical 1 1 1 Affinity Capture-RNA
YML020W YML020W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
GGA1 YDR358W Golgi-localized protein with homology to gamma-adaptin physical 1 1 1 Affinity Capture-RNA
RRN7 YJL025W Component of the core factor (CF) rDNA transcription factor complex physical 1 1 1 Affinity Capture-RNA
YCR007C YCR007C Putative integral membrane protein physical 1 1 1 Affinity Capture-RNA
MSW1 YDR268W Mitochondrial tryptophanyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
VAB2 YEL005C Subunit of the BLOC-1 complex involved in endosomal maturation physical 1 1 1 Affinity Capture-RNA
KIN82 YCR091W Putative serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
YPR084W YPR084W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RRN6 YBL014C Component of the core factor (CF) rDNA transcription factor complex physical 1 1 1 Affinity Capture-RNA
GID11 YLR149C Substrate receptor of the glucose-induced degradation-deficient (GID) physical 1 1 1 Affinity Capture-RNA
ECM30 YLR436C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
VPS20 YMR077C Myristoylated subunit of the ESCRT-III complex physical 1 1 1 Affinity Capture-RNA
VPS20 YMR077C Myristoylated subunit of the ESCRT-III complex genetic 1 1 1 Synthetic Growth Defect
YAP7 YOL028C Transcriptional repressor of nitric oxide oxidase physical 1 1 1 Affinity Capture-RNA
RAD4 YER162C Damaged-DNA binding subunit of Nuclear Excision Repair Factor 2 physical 1 1 1 Affinity Capture-RNA
SNX41 YDR425W Sorting nexin physical 1 1 1 Affinity Capture-RNA
TFC6 YDR362C Subunit of RNA polymerase III transcription initiation factor complex physical 1 1 1 Affinity Capture-RNA
IMG2 YCR071C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
SPT21 YMR179W Protein with a role in transcriptional silencing physical 1 1 1 Affinity Capture-RNA
SAS2 YMR127C Histone acetyltransferase (HAT) catalytic subunit of the SAS complex physical 1 1 1 Affinity Capture-RNA
OMS1 YDR316W Protein integral to the mitochondrial membrane physical 1 1 1 Affinity Capture-RNA
KIN1 YDR122W S/T protein kinase physical 1 1 1 Affinity Capture-RNA
IES4 YOR189W Component of the INO80 chromatiin remodeling complex physical 1 1 1 Affinity Capture-RNA
DAL82 YNL314W Positive regulator of allophanate inducible genes physical 1 1 1 Affinity Capture-RNA
PHO4 YFR034C Basic helix-loop-helix (bHLH) transcription factor of the myc-family physical 1 1 1 Affinity Capture-RNA
HOT1 YMR172W Transcription factor for glycerol biosynthetic genes physical 1 1 1 Affinity Capture-RNA
TFS1 YLR178C Inhibitor of carboxypeptidase Y (Prc1p), and Ras GAP (Ira2p) physical 1 1 1 Affinity Capture-RNA
TSL1 YML100W Large subunit of trehalose 6-phosphate synthase/phosphatase complex physical 1 1 1 Affinity Capture-RNA
EPL1 YFL024C Subunit of NuA4, an essential histone H4/H2A acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
SWC3 YAL011W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SWC3 YAL011W Protein of unknown function genetic 1 1 1 Synthetic Growth Defect
MTH1 YDR277C Negative regulator of the glucose-sensing signal transduction pathway physical 1 1 1 Affinity Capture-RNA
POC4 YPL144W Component of a heterodimeric Poc4p-Irc25p chaperone physical 1 1 1 Affinity Capture-RNA
SLX5 YDL013W Subunit of the Slx5-Slx8 SUMO-targeted Ub ligase (STUbL) complex physical 1 1 1 Affinity Capture-RNA
YLR407W YLR407W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SFI1 YLL003W Centrin (Cdc31p)-binding protein required for SPB duplication physical 1 1 1 Affinity Capture-RNA
GYP1 YOR070C Cis-golgi GTPase-activating protein (GAP) for yeast Rabs physical 1 1 1 Affinity Capture-RNA
ESC2 YDR363W Sumo-like domain protein physical 1 1 1 Affinity Capture-RNA
SNC2 YOR327C Vesicle membrane receptor protein (v-SNARE) physical 1 1 1 Affinity Capture-RNA
MRPS18 YNL306W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
GSY1 YFR015C Glycogen synthase physical 1 1 1 Affinity Capture-RNA
INO4 YOL108C Transcription factor involved in phospholipid synthesis physical 1 1 1 Affinity Capture-RNA
SLM3 YDL033C tRNA-specific 2-thiouridylase physical 1 1 1 Affinity Capture-RNA
MPP6 YNR024W Nuclear exosome-associated RNA binding protein physical 1 1 1 Affinity Capture-RNA
LDB7 YBL006C Component of the RSC chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
INA1 YLR413W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
FIG4 YNL325C Phosphatidylinositol 3,5-bisphosphate (PtdIns[3,5]P) phosphatase physical 1 1 1 Affinity Capture-RNA
YHL008C YHL008C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
DSS1 YMR287C 3'-5' exoribonuclease physical 1 1 1 Affinity Capture-RNA
YGR130C YGR130C Component of the eisosome with unknown function physical 1 1 1 Affinity Capture-RNA
FOL3 YMR113W Dihydrofolate synthetase, involved in folic acid biosynthesis physical 1 1 1 Affinity Capture-RNA
SPC98 YNL126W Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex physical 1 1 1 Affinity Capture-RNA
SNF12 YNR023W 73 kDa subunit of the SWI/SNF chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
YAK1 YJL141C Serine-threonine protein kinase physical 1 1 1 Affinity Capture-RNA
FRA1 YLL029W Protein involved in negative regulation of iron regulon transcription physical 1 1 1 Affinity Capture-RNA
SNU23 YDL098C Component of the U4/U6.U5 snRNP complex physical 1 1 1 Affinity Capture-RNA
GYP8 YFL027C GTPase-activating protein for yeast Rab family members physical 1 1 1 Affinity Capture-RNA
SPP1 YPL138C Subunit of COMPASS (Set1C) physical 1 1 1 Affinity Capture-RNA
IKS1 YJL057C Protein kinase of unknown cellular role physical 1 1 1 Affinity Capture-RNA
SEN2 YLR105C Subunit of the tRNA splicing endonuclease physical 1 1 1 Affinity Capture-RNA
VPS73 YGL104C Mitochondrial protein physical 1 1 1 Affinity Capture-RNA
PFK27 YOL136C 6-phosphofructo-2-kinase physical 1 1 1 Affinity Capture-RNA
CWC27 YPL064C Component of a complex containing Cef1p physical 1 1 1 Affinity Capture-RNA
PRP4 YPR178W Splicing factor physical 1 1 1 Affinity Capture-RNA
LGE1 YPL055C Protein involved in histone H2B ubiquitination physical 1 1 1 Affinity Capture-RNA
DBF4 YDR052C Regulatory subunit of Cdc7p-Dbf4p kinase complex physical 1 1 1 Affinity Capture-RNA
DBF4 YDR052C Regulatory subunit of Cdc7p-Dbf4p kinase complex genetic 1 1 1 Negative Genetic
YNR048W YNR048W Potential noncatalytic subunit for phospholipid translocase Dnf3p physical 1 1 1 Affinity Capture-RNA
MSY1 YPL097W Mitochondrial tyrosyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
MSY1 YPL097W Mitochondrial tyrosyl-tRNA synthetase genetic 1 1 1 Synthetic Lethality
NUM1 YDR150W Protein required for nuclear migration physical 1 1 1 Affinity Capture-RNA
YOR289W YOR289W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PSO2 YMR137C Nuclease required for DNA single- and double-strand break repair physical 1 1 1 Affinity Capture-RNA
MRP2 YPR166C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
UPF3 YGR072W Component of the nonsense-mediated mRNA decay (NMD) pathway physical 1 1 1 Affinity Capture-RNA
PKP1 YIL042C Mitochondrial protein kinase physical 1 1 1 Affinity Capture-RNA
TOR2 YKL203C PIK-related protein kinase and rapamycin target physical 1 1 1 Affinity Capture-RNA
SMN1 YHR202W Putative AMP hydrolase physical 1 1 1 Affinity Capture-RNA
MRX20 YFR045W Putative mitochondrial transport protein physical 1 1 1 Affinity Capture-RNA
SLX1 YBR228W Endonuclease involved in DNA recombination and repair physical 1 1 1 Affinity Capture-RNA
RGA2 YDR379W GTPase-activating protein for polarity-establishment protein Cdc42p physical 1 1 1 Affinity Capture-RNA
DPB11 YJL090C DNA replication initiation protein physical 1 1 1 Affinity Capture-RNA
ZAP1 YJL056C Zinc-regulated transcription factor physical 1 1 1 Affinity Capture-RNA
SRB6 YBR253W Subunit of the RNA polymerase II mediator complex physical 1 1 1 Affinity Capture-RNA
GOR1 YNL274C Glyoxylate reductase physical 1 1 1 Affinity Capture-RNA
MRPL24 YMR193W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
OST4 YDL232W Subunit of the oligosaccharyltransferase complex of the ER lumen physical 1 1 1 Affinity Capture-RNA
MRL1 YPR079W Membrane protein physical 1 1 1 Affinity Capture-RNA
PCP1 YGR101W Mitochondrial serine protease physical 1 1 1 Affinity Capture-RNA
USE1 YGL098W Essential SNARE protein localized to the ER physical 1 1 1 Affinity Capture-RNA
VPS60 YDR486C Protein involved in late endosome to vacuole transport physical 1 1 1 Affinity Capture-RNA
ODC2 YOR222W Mitochondrial inner membrane transporter physical 1 1 1 Affinity Capture-RNA
SMT1 YJL147C Translational repressor of the mitochondrial ATP6/8 mRNA physical 1 1 1 Affinity Capture-RNA
HER1 YOR227W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
TDA11 YHR159W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
ULP2 YIL031W Peptidase that deconjugates Smt3/SUMO-1 peptides from proteins physical 1 1 1 Affinity Capture-RNA
FAB1 YFR019W 1-phosphatidylinositol-3-phosphate 5-kinase physical 1 1 1 Affinity Capture-RNA
DUO1 YGL061C Essential subunit of the Dam1 complex (aka DASH complex) physical 1 1 1 Affinity Capture-RNA
DCP2 YNL118C Catalytic subunit of Dcp1p-Dcp2p decapping enzyme complex physical 1 1 1 Affinity Capture-RNA
POP7 YBR167C Subunit of RNase MRP, nuclear RNase P and telomerase physical 1 1 1 Affinity Capture-RNA
TMA17 YDL110C Regulatory gamma subunit of fatty acid synthase (FAS) physical 1 1 1 Affinity Capture-RNA
MRPS28 YDR337W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
PRP21 YJL203W Subunit of the SF3a splicing factor complex physical 1 1 1 Affinity Capture-RNA
MSN1 YOL116W Transcriptional activator physical 1 1 1 Affinity Capture-RNA
MRPL16 YBL038W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
PLP1 YDR183W Protein that interacts with CCT (chaperonin containing TCP-1) complex physical 1 1 1 Affinity Capture-RNA
GZF3 YJL110C GATA zinc finger protein physical 1 1 1 Affinity Capture-RNA
YHR033W YHR033W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YNG2 YHR090C Subunit of NuA4, an essential histone acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
IPF1 YDL176W Protein of unknown function involved in actin patch formation physical 1 1 1 Affinity Capture-RNA
UBP16 YPL072W Deubiquitinating enzyme anchored to the outer mitochondrial membrane physical 1 1 1 Affinity Capture-RNA
PET111 YMR257C Mitochondrial translational activator specific for the COX2 mRNA physical 1 1 1 Affinity Capture-RNA
YLR345W YLR345W Similar to 6-phosphofructo-2-kinase enzymes physical 1 1 1 Affinity Capture-RNA
ZDS1 YMR273C Protein with a role in regulating Swe1p-dependent polarized growth physical 1 1 1 Affinity Capture-RNA
FRT1 YOR324C Tail-anchored ER membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
IES3 YLR052W Subunit of the INO80 chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
MRS3 YJL133W Iron transporter, mediates Fe2+ transport across inner mito membrane physical 1 1 1 Affinity Capture-RNA
RPC17 YJL011C RNA polymerase III subunit C17 physical 1 1 1 Affinity Capture-RNA
CYC3 YAL039C Cytochrome c heme lyase (holocytochrome c synthase) physical 1 1 1 Affinity Capture-RNA
MAL11 YGR289C High-affinity maltose transporter (alpha-glucoside transporter) physical 1 1 1 Affinity Capture-RNA
YER076C YER076C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SKM1 YOL113W Member of the PAK family of serine/threonine protein kinases physical 1 1 1 Affinity Capture-RNA
YTP1 YNL237W Probable type-III integral membrane protein of unknown function physical 1 1 1 Affinity Capture-RNA
RSM27 YGR215W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
MSP1 YGR028W Highly-conserved N-terminally anchored AAA-ATPase physical 1 1 1 Affinity Capture-RNA
RCI50 YKL133C Mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
PET494 YNR045W Mitochondrial translational activator specific for the COX3 mRNA physical 1 1 1 Affinity Capture-RNA
MRP13 YGR084C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
DIB1 YPR082C 17-kDa component of the U4/U6aU5 tri-snRNP physical 1 1 1 Affinity Capture-RNA
ZPS1 YOL154W Putative GPI-anchored protein physical 1 1 1 Affinity Capture-RNA
YDR249C YDR249C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MIC12 YBR262C Component of the MICOS complex physical 1 1 1 Affinity Capture-RNA
VID30 YGL227W Central component of GID Complex, involved in FBPase degradation physical 1 1 1 Affinity Capture-RNA
SPP2 YOR148C Essential protein that promotes the first step of splicing physical 1 1 1 Affinity Capture-RNA
ECM12 YHR021W-A Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RRN3 YKL125W Protein required for transcription of rDNA by RNA polymerase I physical 1 1 1 Affinity Capture-RNA
TDA1 YMR291W Protein kinase of unknown cellular role physical 1 1 1 Affinity Capture-RNA
FHL1 YPR104C Regulator of ribosomal protein (RP) transcription physical 1 1 1 Affinity Capture-RNA
MIG3 YER028C Transcriptional regulator physical 1 1 1 Affinity Capture-RNA
EIS1 YMR031C Component of the eisosome required for proper eisosome assembly physical 1 1 1 Affinity Capture-RNA
MRPS17 YMR188C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
NTG2 YOL043C DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase physical 1 1 1 Affinity Capture-RNA
RBH1 YJL181W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
ISA1 YLL027W Protein required for maturation of mitochondrial [4Fe-4S] proteins physical 1 1 1 Affinity Capture-RNA
ELC1 YPL046C Elongin C, conserved among eukaryotes physical 1 1 1 Affinity Capture-RNA
IPT1 YDR072C Inositolphosphotransferase physical 1 1 1 Affinity Capture-RNA
PIN2 YOR104W Exomer-dependent cargo protein physical 1 1 1 Affinity Capture-RNA
SIZ1 YDR409W SUMO E3 ligase physical 1 1 1 Affinity Capture-RNA
FYV4 YHR059W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PEX29 YDR479C ER-resident protein involved in peroxisomal biogenesis physical 1 1 1 Affinity Capture-RNA
VMR1 YHL035C Vacuolar membrane protein physical 1 1 1 Affinity Capture-RNA
SLX4 YLR135W Endonuclease involved in processing DNA physical 1 1 1 Affinity Capture-RNA
TLG1 YDR468C Essential t-SNARE that mediates fusion of vesicles with the late Golgi physical 1 1 1 Affinity Capture-RNA
YCR101C YCR101C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
KAR3 YPR141C Minus-end-directed microtubule motor physical 1 1 1 Affinity Capture-RNA
KAR3 YPR141C Minus-end-directed microtubule motor genetic 1 1 1 Synthetic Lethality
DCR2 YLR361C Protein phosphatase physical 1 1 1 Affinity Capture-RNA
ELM1 YKL048C Serine/threonine protein kinase physical 1 1 1 Affinity Capture-RNA
ELM1 YKL048C Serine/threonine protein kinase genetic 1 1 1 Synthetic Growth Defect
YNL234W YNL234W Protein of unknown function with similarity to globins physical 1 1 1 Affinity Capture-RNA
SER3 YER081W 3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase physical 1 1 1 Affinity Capture-RNA
RMD9 YGL107C Mitochondrial protein that controls mitochondrial gene expression physical 1 1 1 Affinity Capture-RNA
SPT10 YJL127C Histone H3 acetylase with a role in transcriptional regulation physical 1 1 1 Affinity Capture-RNA
SBE2 YDR351W Protein required for bud growth physical 1 1 1 Affinity Capture-RNA
CTO1 YCR015C Protein required for cold tolerance physical 1 1 1 Affinity Capture-RNA
YLR036C YLR036C Putative protein predicted to have transmembrane domains physical 1 1 1 Affinity Capture-RNA
SRF1 YDL133W Regulator of phospholipase D (Spo14p) physical 1 1 1 Affinity Capture-RNA
GPB2 YAL056W Multistep regulator of cAMP-PKA signaling physical 1 1 1 Affinity Capture-RNA
RIB7 YBR153W Diaminohydroxyphoshoribosylaminopyrimidine deaminase physical 1 1 1 Affinity Capture-RNA
DAL7 YIR031C Malate synthase physical 1 1 1 Affinity Capture-RNA
SSH4 YKL124W Specificity factor required for Rsp5p-dependent ubiquitination physical 1 1 1 Affinity Capture-RNA
MUP3 YHL036W Low affinity methionine permease physical 1 1 1 Affinity Capture-RNA
SWC4 YGR002C Component of the Swr1p complex that incorporates Htz1p into chromatin physical 1 1 1 Affinity Capture-RNA
YLR456W YLR456W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
EAF5 YEL018W Non-essential subunit of the NuA4 acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
CDC7 YDL017W S/T kinase and catalytic subunit of DDK (Dbf4-dependent kinase) physical 1 1 1 Affinity Capture-RNA
ERF2 YLR246W Subunit of a palmitoyltransferase physical 1 1 1 Affinity Capture-RNA
PZF1 YPR186C Transcription factor IIIA (TFIIIA) physical 1 1 1 Affinity Capture-RNA
NSE3 YDR288W Component of the SMC5-SMC6 complex physical 1 1 1 Affinity Capture-RNA
SFG1 YOR315W Nuclear protein putative transcription factor physical 1 1 1 Affinity Capture-RNA
SMD2 YLR275W Core Sm protein Sm D2 physical 1 1 1 Affinity Capture-RNA
OCA5 YHL029C Cytoplasmic protein required for replication of Brome mosaic virus physical 1 1 1 Affinity Capture-RNA
NHP10 YDL002C Non-essential INO80 chromatin remodeling complex subunit physical 1 1 1 Affinity Capture-RNA
YOR012W YOR012W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YJR154W YJR154W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YLH47 YPR125W Mitochondrial inner membrane protein physical 1 1 1 Affinity Capture-RNA
MAD1 YGL086W Coiled-coil protein involved in spindle-assembly checkpoint physical 1 1 1 Affinity Capture-RNA
SWS2 YNL081C Putative mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
COX10 YPL172C Heme A:farnesyltransferase physical 1 1 1 Affinity Capture-RNA
SNU71 YGR013W Component of U1 snRNP required for mRNA splicing via spliceosome physical 1 1 1 Affinity Capture-RNA
SSK1 YLR006C Cytoplasmic phosphorelay intermediate osmosensor and regulator physical 1 1 1 Affinity Capture-RNA
PTH1 YHR189W One of two mitochondrially-localized peptidyl-tRNA hydrolases physical 1 1 1 Affinity Capture-RNA
PTH1 YHR189W One of two mitochondrially-localized peptidyl-tRNA hydrolases genetic 1 1 1 Synthetic Growth Defect
GFD1 YMR255W Coiled-coiled protein of unknown function physical 1 1 1 Affinity Capture-RNA
HOS3 YPL116W Trichostatin A-insensitive homodimeric histone deacetylase (HDAC) physical 1 1 1 Affinity Capture-RNA
RIF2 YLR453C Protein that binds to the Rap1p C-terminus physical 1 1 1 Affinity Capture-RNA
ILT1 YDR090C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YER034W YER034W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
NDC80 YIL144W Component of the kinetochore-associated Ndc80 complex physical 1 1 1 Affinity Capture-RNA
KRE28 YDR532C Subunit of a kinetochore-microtubule binding complex physical 1 1 1 Affinity Capture-RNA
DAM1 YGR113W Essential subunit of the Dam1 complex (aka DASH complex) physical 1 1 1 Affinity Capture-RNA
PDE2 YOR360C High-affinity cyclic AMP phosphodiesterase physical 1 1 1 Affinity Capture-RNA
SUT2 YPR009W Zn2Cys6 family transcription factor physical 1 1 1 Affinity Capture-RNA
HFL1 YKR051W Vacuole membrane protein that interacts with Atg8p physical 1 1 1 Affinity Capture-RNA
DOC1 YGL240W Processivity factor physical 1 1 1 Affinity Capture-RNA
SOL4 YGR248W 6-phosphogluconolactonase physical 1 1 1 Affinity Capture-RNA
YMR114C YMR114C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
TDA6 YPR157W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YBR013C YBR013C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
TRR2 YHR106W Mitochondrial thioredoxin reductase physical 1 1 1 Affinity Capture-RNA
RCF1 YML030W Cytochrome c oxidase subunit physical 1 1 1 Affinity Capture-RNA
CKS1 YBR135W Cyclin-dependent protein kinase regulatory subunit and adaptor physical 1 1 1 Affinity Capture-RNA
SGF73 YGL066W Subunit of DUBm module of SAGA and SLIK physical 1 1 1 Affinity Capture-RNA
EUC1 YMR111C Sequence-specific DNA binding protein physical 1 1 1 Affinity Capture-RNA
MUB1 YMR100W MYND domain-containing protein physical 1 1 1 Affinity Capture-RNA
UBP9 YER098W Ubiquitin-specific protease that cleaves ubiquitin-protein fusions physical 1 1 1 Affinity Capture-RNA
PRP40 YKL012W U1 snRNP protein involved in splicing physical 1 1 1 Affinity Capture-RNA
YOR338W YOR338W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YER158C YER158C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SNC1 YAL030W Vesicle membrane receptor protein (v-SNARE) physical 1 1 1 Affinity Capture-RNA
URC2 YDR520C Putative Zn(II)2Cys6 motif containing transcription factor physical 1 1 1 Affinity Capture-RNA
MCM16 YPR046W Component of the Ctf19 complex and the COMA subcomplex physical 1 1 1 Affinity Capture-RNA
MDH2 YOL126C Cytoplasmic malate dehydrogenase physical 1 1 1 Affinity Capture-RNA
PTP3 YER075C Phosphotyrosine-specific protein phosphatase physical 1 1 1 Affinity Capture-RNA
GSY2 YLR258W Glycogen synthase physical 1 1 1 Affinity Capture-RNA
MUD2 YKL074C Protein involved in early pre-mRNA splicing physical 1 1 1 Affinity Capture-RNA
MET4 YNL103W Leucine-zipper transcriptional activator physical 1 1 1 Affinity Capture-RNA
PAC1 YOR269W Regulator of dynein, involved in intracellular transport physical 1 1 1 Affinity Capture-RNA
CMK2 YOL016C Calmodulin-dependent protein kinase physical 1 1 1 Affinity Capture-RNA
IES1 YFL013C Subunit of the INO80 chromatin remodeling complex physical 1 1 1 Affinity Capture-RNA
MTF2 YDL044C Mitochondrial protein that interacts with mitochondrial RNA polymerase physical 1 1 1 Affinity Capture-RNA
IDH1 YNL037C Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase physical 1 1 1 Affinity Capture-RNA
HCM1 YCR065W Forkhead transcription factor physical 1 1 1 Affinity Capture-RNA
DCS2 YOR173W m(7)GpppX pyrophosphatase regulator physical 1 1 1 Affinity Capture-RNA
RAD2 YGR258C Single-stranded DNA endonuclease physical 1 1 1 Affinity Capture-RNA
PPZ2 YDR436W Serine/threonine protein phosphatase Z, isoform of Ppz1p physical 1 1 1 Affinity Capture-RNA
MFA1 YDR461W Mating pheromone a-factor physical 1 1 1 Affinity Capture-RNA
FUB1 YCR076C Proteasome-binding protein physical 1 1 1 Affinity Capture-RNA
TCM62 YBR044C Protein involved in assembly of the succinate dehydrogenase complex physical 1 1 1 Affinity Capture-RNA
YIL089W YIL089W Protein of unknown function found in the ER and vacuole lumen physical 1 1 1 Affinity Capture-RNA
PET20 YPL159C Mitochondrial protein physical 1 1 1 Affinity Capture-RNA
IST1 YNL265C Protein with positive role in the multivesicular body sorting pathway physical 1 1 1 Affinity Capture-RNA
SRY1 YKL218C 3-hydroxyaspartate dehydratase physical 1 1 1 Affinity Capture-RNA
YPL034W YPL034W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SPP381 YBR152W mRNA splicing factor, component of U4/U6.U5 tri-snRNP physical 1 1 1 Affinity Capture-RNA
GTF1 YGR102C Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex physical 1 1 1 Affinity Capture-RNA
MPA43 YNL249C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
DTD1 YDL219W D-Tyr-tRNA(Tyr) deacylase physical 1 1 1 Affinity Capture-RNA
YGR079W YGR079W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
SOK1 YDR006C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MTC6 YHR151C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PCL7 YIL050W Pho85p cyclin of the Pho80p subfamily physical 1 1 1 Affinity Capture-RNA
HEL1 YKR017C RING finger ubiquitin ligase (E3) physical 1 1 1 Affinity Capture-RNA
TOF2 YKR010C Protein required for rDNA silencing and mitotic rDNA condensation physical 1 1 1 Affinity Capture-RNA
TOF2 YKR010C Protein required for rDNA silencing and mitotic rDNA condensation genetic 1 1 1 Synthetic Growth Defect
RMR1 YGL250W Protein required for meiotic recombination and gene conversion physical 1 1 1 Affinity Capture-RNA
FLO8 YER109C Transcription factor physical 1 1 1 Affinity Capture-RNA
RTS3 YGR161C Putative component of the protein phosphatase type 2A complex physical 1 1 1 Affinity Capture-RNA
ITT1 YML068W Protein that modulates the efficiency of translation termination physical 1 1 1 Affinity Capture-RNA
YML053C YML053C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
EAF7 YNL136W Subunit of the NuA4 histone acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
LIF1 YGL090W Component of the DNA ligase IV complex physical 1 1 1 Affinity Capture-RNA
TRM12 YML005W S-adenosylmethionine-dependent methyltransferase physical 1 1 1 Affinity Capture-RNA
MKS1 YNL076W Pleiotropic negative transcriptional regulator physical 1 1 1 Affinity Capture-RNA
GPX1 YKL026C Phospholipid hydroperoxide glutathione peroxidase physical 1 1 1 Affinity Capture-RNA
GYP7 YDL234C GTPase-activating protein for yeast Rab family members physical 1 1 1 Affinity Capture-RNA
SKN1 YGR143W Protein involved in sphingolipid biosynthesis physical 1 1 1 Affinity Capture-RNA
MIH1 YMR036C Protein tyrosine phosphatase physical 1 1 1 Affinity Capture-RNA
CWC21 YDR482C Protein involved in RNA splicing by the spliceosome physical 1 1 1 Affinity Capture-RNA
MSB4 YOL112W GTPase-activating protein of the Ras superfamily physical 1 1 1 Affinity Capture-RNA
HST3 YOR025W Sirtuin, histone H3 deacetylase physical 1 1 1 Affinity Capture-RNA
HHF1 YBR009C Histone H4 physical 1 1 1 Affinity Capture-RNA
SWI6 YLR182W Transcription cofactor physical 1 1 1 Affinity Capture-RNA
YGR127W YGR127W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PDS1 YDR113C Securin physical 1 1 1 Affinity Capture-RNA
YBR259W YBR259W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
LRG1 YDL240W GTPase-activating protein (GAP) physical 1 1 1 Affinity Capture-RNA
DBP1 YPL119C ATP-dependent RNA helicase of the DEAD-box protein family physical 1 1 1 Affinity Capture-RNA
MTO1 YGL236C Mitochondrial protein physical 1 1 1 Affinity Capture-RNA
YJL213W YJL213W Protein of unknown function that may interact with ribosomes physical 1 1 1 Affinity Capture-RNA
SKA1 YKL023W SKI complex-associated protein physical 1 1 1 Affinity Capture-RNA
SNT309 YPR101W Member of the NineTeen Complex (NTC) physical 1 1 1 Affinity Capture-RNA
RSM19 YNR037C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
RSM18 YER050C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
MAM33 YIL070C Acidic protein of the mitochondrial matrix physical 1 1 1 Affinity Capture-RNA
MEP3 YPR138C Ammonium permease of high capacity and low affinity physical 1 1 1 Affinity Capture-RNA
GLG1 YKR058W Glycogenin glucosyltransferase physical 1 1 1 Affinity Capture-RNA
DSE3 YOR264W Daughter cell-specific protein, may help establish daughter fate physical 1 1 1 Affinity Capture-RNA
GLD1 YPR109W Component of Dsc E3 ligase complex in Golgi and endosomes physical 1 1 1 Affinity Capture-RNA
SWD1 YAR003W Subunit of the COMPASS (Set1C) complex physical 1 1 1 Affinity Capture-RNA
MND2 YIR025W Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) physical 1 1 1 Affinity Capture-RNA
TMA10 YLR327C Protein of unknown function that associates with ribosomes physical 1 1 1 Affinity Capture-RNA
YPL071C YPL071C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SPI1 YER150W GPI-anchored cell wall protein involved in weak acid resistance physical 1 1 1 Affinity Capture-RNA
URN1 YPR152C Protein of unknown function containing WW and FF domains physical 1 1 1 Affinity Capture-RNA
MDM32 YOR147W Mitochondrial inner membrane protein with similarity to Mdm31p physical 1 1 1 Affinity Capture-RNA
SYH1 YPL105C Protein of unknown function that influences nuclear pore distribution physical 1 1 1 Affinity Capture-RNA
UBP5 YER144C Putative ubiquitin-specific protease physical 1 1 1 Affinity Capture-RNA
RRN5 YLR141W Protein involved in transcription of rDNA by RNA polymerase I physical 1 1 1 Affinity Capture-RNA
CIT2 YCR005C Citrate synthase, peroxisomal isozyme involved in glyoxylate cycle physical 1 1 1 Affinity Capture-RNA
YPL077C YPL077C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YIL161W YIL161W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MRPS16 YPL013C Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
MRPL50 YNR022C Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
QRI5 YLR204W Mitochondrial inner membrane protein physical 1 1 1 Affinity Capture-RNA
CHA4 YLR098C DNA binding transcriptional activator physical 1 1 1 Affinity Capture-RNA
MUM2 YBR057C Protein essential for meiotic DNA replication and sporulation physical 1 1 1 Affinity Capture-RNA
SPO71 YDR104C Meiosis-specific protein required for prospore membrane morphogenesis physical 1 1 1 Affinity Capture-RNA
PTP2 YOR208W Phosphotyrosine-specific phosphatase physical 1 1 1 Affinity Capture-RNA
RUP1 YOR138C Protein that regulates ubiquitination of Rsp5p physical 1 1 1 Affinity Capture-RNA
MFB1 YDR219C Mitochondria-associated F-box protein physical 1 1 1 Affinity Capture-RNA
GPH1 YPR160W Glycogen phosphorylase required for the mobilization of glycogen physical 1 1 1 Affinity Capture-RNA
CSN9 YDR179C Subunit of the Cop9 signalosome physical 1 1 1 Affinity Capture-RNA
YHC1 YLR298C Component of the U1 snRNP complex required for pre-mRNA splicing physical 1 1 1 Affinity Capture-RNA
PET130 YJL023C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YHP1 YDR451C Homeobox transcriptional repressor physical 1 1 1 Affinity Capture-RNA
TPO2 YGR138C Polyamine transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
SHG1 YBR258C Subunit of the COMPASS (Set1C) complex physical 1 1 1 Affinity Capture-RNA
YGP1 YNL160W Cell wall-related secretory glycoprotein physical 1 1 1 Affinity Capture-RNA
VTS1 YOR359W Flap-structured DNA-binding and RNA-binding protein physical 1 1 1 Affinity Capture-RNA
HST4 YDR191W NAD(+)-dependent protein deacetylase physical 1 1 1 Affinity Capture-RNA
PIC2 YER053C Mitochondrial copper and phosphate carrier physical 1 1 1 Affinity Capture-RNA
LDB18 YLL049W Component of the dynactin complex physical 1 1 1 Affinity Capture-RNA
QCR6 YFR033C Subunit 6 of the ubiquinol cytochrome-c reductase complex physical 1 1 1 Affinity Capture-RNA
GUF1 YLR289W Mitochondrial matrix GTPase physical 1 1 1 Affinity Capture-RNA
JNM1 YMR294W Component of the yeast dynactin complex physical 1 1 1 Affinity Capture-RNA
HSP26 YBR072W Small heat shock protein (sHSP) with chaperone activity physical 1 1 1 Affinity Capture-RNA
SPH1 YLR313C Protein involved in shmoo formation and bipolar bud site selection physical 1 1 1 Affinity Capture-RNA
MRP10 YDL045W-A Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
GPI19 YDR437W Subunit of GPI-GlcNAc transferase involved in synthesis of GlcNAc-PI physical 1 1 1 Affinity Capture-RNA
RMD6 YEL072W Protein required for sporulation physical 1 1 1 Affinity Capture-RNA
TBS1 YBR150C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PLB3 YOL011W Phospholipase B (lysophospholipase) involved in lipid metabolism physical 1 1 1 Affinity Capture-RNA
DAL2 YIR029W Allantoicase physical 1 1 1 Affinity Capture-RNA
STD1 YOR047C Protein involved in control of glucose-regulated gene expression physical 1 1 1 Affinity Capture-RNA
SPL2 YHR136C Protein with similarity to cyclin-dependent kinase inhibitors physical 1 1 1 Affinity Capture-RNA
NSE4 YDL105W Component of the SMC5-SMC6 complex physical 1 1 1 Affinity Capture-RNA
YBL029W YBL029W Non-essential protein of unknown function physical 1 1 1 Affinity Capture-RNA
YNL144C YNL144C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
YGL176C YGL176C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RTS2 YOR077W Basic zinc-finger protein physical 1 1 1 Affinity Capture-RNA
SRL3 YKR091W Repressor of transcription at Start physical 1 1 1 Affinity Capture-RNA
SWC5 YBR231C Component of the SWR1 complex physical 1 1 1 Affinity Capture-RNA
TSA2 YDR453C Stress inducible cytoplasmic thioredoxin peroxidase physical 1 1 1 Affinity Capture-RNA
CIP1 YPL014W Cyclin-dependent kinase inhibitor physical 1 1 1 Affinity Capture-RNA
RRT6 YGL146C Integral membrane protein, member of the p24 family physical 1 1 1 Affinity Capture-RNA
SPT2 YER161C Protein involved in negative regulation of transcription physical 1 1 1 Affinity Capture-RNA
PKP2 YGL059W Mitochondrial protein kinase physical 1 1 1 Affinity Capture-RNA
PEX27 YOR193W Peripheral peroxisomal membrane protein physical 1 1 1 Affinity Capture-RNA
MRS4 YKR052C Iron transporter of the mitochondrial carrier family physical 1 1 1 Affinity Capture-RNA
MOT3 YMR070W Transcriptional repressor, activator physical 1 1 1 Affinity Capture-RNA
MOT3 YMR070W Transcriptional repressor, activator genetic 1 1 1 Synthetic Growth Defect
RAD18 YCR066W E3 ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
NDD1 YOR372C Transcriptional activator essential for nuclear division physical 1 1 1 Affinity Capture-RNA
SAS5 YOR213C Subunit of the SAS complex (Sas2p, Sas4p, Sas5p) physical 1 1 1 Affinity Capture-RNA
RSM10 YDR041W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
CTF13 YMR094W Subunit of the CBF3 complex physical 1 1 1 Affinity Capture-RNA
ICS2 YBR157C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PEX10 YDR265W Peroxisomal membrane E3 ubiquitin ligase physical 1 1 1 Affinity Capture-RNA
RPL40B YKR094C Ubiquitin-ribosomal 60S subunit protein L40B fusion protein physical 1 1 1 Affinity Capture-RNA
SFK1 YKL051W Protein that regulates phospholipid asymmetry at plasma membrane physical 1 1 1 Affinity Capture-RNA
MAC1 YMR021C Copper-sensing transcription factor physical 1 1 1 Affinity Capture-RNA
IAI11 YBL059W Putative mitochondrial protein of unknown function physical 1 1 1 Affinity Capture-RNA
OAZ1 YPL052W Regulator of ornithine decarboxylase Spe1p physical 1 1 1 Affinity Capture-RNA
LCL2 YLR104W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SHU2 YDR078C Component of Shu complex (aka PCSS complex) physical 1 1 1 Affinity Capture-RNA
CLN3 YAL040C G1 cyclin involved in cell cycle progression physical 1 1 1 Affinity Capture-RNA
CLN3 YAL040C G1 cyclin involved in cell cycle progression genetic 1 1 1 Synthetic Lethality
PDR3 YBL005W Transcriptional activator of the pleiotropic drug resistance network physical 1 1 1 Affinity Capture-RNA
IPK1 YDR315C Inositol 1,3,4,5,6-pentakisphosphate 2-kinase physical 1 1 1 Affinity Capture-RNA
PSY3 YLR376C Component of Shu complex (aka PCSS complex) physical 1 1 1 Affinity Capture-RNA
MRF1 YGL143C Mitochondrial translation release factor physical 1 1 1 Affinity Capture-RNA
YNR014W YNR014W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
SPO7 YAL009W Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme physical 1 1 1 Affinity Capture-RNA
RTG3 YBL103C bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways physical 1 1 1 Affinity Capture-RNA
RTG3 YBL103C bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways genetic 1 1 1 Positive Genetic
COG2 YGR120C Essential component of the conserved oligomeric Golgi complex physical 1 1 1 Affinity Capture-RNA
ISA2 YPR067W Protein required for maturation of mitochondrial [4Fe-4S] proteins physical 1 1 1 Affinity Capture-RNA
MET16 YPR167C 3'-phosphoadenylsulfate reductase physical 1 1 1 Affinity Capture-RNA
KIP3 YGL216W Kinesin-related antiparallel sliding motor protein physical 1 1 1 Affinity Capture-RNA
SIT1 YEL065W Ferrioxamine B transporter physical 1 1 1 Affinity Capture-RNA
YOR292C YOR292C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
DAL3 YIR032C Ureidoglycolate lyase physical 1 1 1 Affinity Capture-RNA
VPS64 YDR200C Protein required for cytoplasm to vacuole targeting of proteins physical 1 1 1 Affinity Capture-RNA
YMR196W YMR196W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
ECM4 YKR076W S-glutathionyl-(chloro)hydroquinone reductase (GS-HQR) physical 1 1 1 Affinity Capture-RNA
ROM1 YGR070W Guanine nucleotide exchange factor (GEF) for Rho1p physical 1 1 1 Affinity Capture-RNA
YLR177W YLR177W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
INO2 YDR123C Transcription factor physical 1 1 1 Affinity Capture-RNA
INO2 YDR123C Transcription factor genetic 1 1 1 Negative Genetic
PEX21 YGR239C Peroxin required for peroxisomal matrix protein targeting physical 1 1 1 Affinity Capture-RNA
DAT1 YML113W DNA binding protein that recognizes oligo(dA).oligo(dT) tracts physical 1 1 1 Affinity Capture-RNA
MRPL51 YPR100W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
DIA2 YOR080W Origin-binding F-box protein physical 1 1 1 Affinity Capture-RNA
GLN3 YER040W Transcriptional activator in nitrogen catabolite repression system physical 1 1 1 Affinity Capture-RNA
KAR1 YNL188W Protein involved in karyogamy and spindle pole body duplication physical 1 1 1 Affinity Capture-RNA
TIM54 YJL054W Component of the mitochondrial TIM22 complex physical 1 1 1 Affinity Capture-RNA
CUP2 YGL166W Copper-binding transcription factor physical 1 1 1 Affinity Capture-RNA
CDC6 YJL194W Essential ATP-binding protein required for DNA replication physical 1 1 1 Affinity Capture-RNA
CDC6 YJL194W Essential ATP-binding protein required for DNA replication genetic 1 1 1 Synthetic Lethality
CDH1 YGL003C Activator of anaphase-promoting complex/cyclosome (APC/C) physical 1 1 1 Affinity Capture-RNA
CDH1 YGL003C Activator of anaphase-promoting complex/cyclosome (APC/C) genetic 1 1 1 Negative Genetic
PRP3 YDR473C Splicing factor physical 1 1 1 Affinity Capture-RNA
PEX14 YGL153W Central component of the peroxisomal importomer complex physical 1 1 1 Affinity Capture-RNA
CYB2 YML054C Cytochrome b2 (L-lactate cytochrome-c oxidoreductase) physical 1 1 1 Affinity Capture-RNA
TPO4 YOR273C Polyamine transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
GAP1 YKR039W General amino acid permease physical 1 1 1 Affinity Capture-RNA
PET117 YER058W Assembly factor that couples heme a synthesis to complex IV assembly physical 1 1 1 Affinity Capture-RNA
SCW11 YGL028C Cell wall protein with similarity to glucanases physical 1 1 1 Affinity Capture-RNA
HIT1 YJR055W Protein involved in C/D snoRNP assembly physical 1 1 1 Affinity Capture-RNA
TAM41 YGR046W Mitochondrial phosphatidate cytidylyltransferase (CDP-DAG synthase) physical 1 1 1 Affinity Capture-RNA
CIN8 YEL061C Bipolar kinesin motor protein physical 1 1 1 Affinity Capture-RNA
YDL206W YDL206W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
FMP33 YJL161W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
NAM8 YHR086W RNA binding protein, component of the U1 snRNP protein physical 1 1 1 Affinity Capture-RNA
EDC2 YER035W RNA-binding protein that directly activates mRNA decapping physical 1 1 1 Affinity Capture-RNA
COX14 YML129C Mitochondrial cytochrome c oxidase (complex IV) assembly factor physical 1 1 1 Affinity Capture-RNA
INP1 YMR204C Peripheral membrane protein of peroxisomes physical 1 1 1 Affinity Capture-RNA
STP4 YDL048C Protein containing a Kruppel-type zinc-finger domain physical 1 1 1 Affinity Capture-RNA
SHR5 YOL110W Palmitoyltransferase subunit physical 1 1 1 Affinity Capture-RNA
PRP45 YAL032C Protein required for pre-mRNA splicing physical 1 1 1 Affinity Capture-RNA
IML2 YJL082W Protein required for clearance of inclusion bodies physical 1 1 1 Affinity Capture-RNA
TIR4 YOR009W Cell wall mannoprotein physical 1 1 1 Affinity Capture-RNA
NTR2 YKR022C Essential protein that forms a dimer with Ntr1p physical 1 1 1 Affinity Capture-RNA
MTE1 YGR042W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
VFA1 YER128W Protein that interacts with Vps4p and has a role in vacuolar sorting physical 1 1 1 Affinity Capture-RNA
HTC1 YPL067C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PET123 YOR158W Mitochondrial ribosomal protein of the small subunit physical 1 1 1 Affinity Capture-RNA
PHM8 YER037W Lysophosphatidic acid (LPA) phosphatase, nucleotidase physical 1 1 1 Affinity Capture-RNA
SPC25 YER018C Component of the kinetochore-associated Ndc80 complex physical 1 1 1 Affinity Capture-RNA
HOR7 YMR251W-A Protein of unknown function physical 1 1 1 Affinity Capture-RNA
PDR15 YDR406W Plasma membrane ATP binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
ECM19 YLR390W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
YOR062C YOR062C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
LSM7 YNL147W Lsm (Like Sm) protein physical 1 1 1 Affinity Capture-RNA
LSM7 YNL147W Lsm (Like Sm) protein genetic 1 1 1 Synthetic Lethality
PSP1 YDR505C Asn and gln rich protein of unknown function physical 1 1 1 Affinity Capture-RNA
YHR131C YHR131C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
MSN4 YKL062W Stress-responsive transcriptional activator physical 1 1 1 Affinity Capture-RNA
SIA1 YOR137C Protein of unassigned function physical 1 1 1 Affinity Capture-RNA
GPG1 YGL121C Proposed gamma subunit of the heterotrimeric G protein physical 1 1 1 Affinity Capture-RNA
CDC27 YBL084C Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) physical 1 1 1 Affinity Capture-RNA
PCL1 YNL289W Cyclin, interacts with cyclin-dependent kinase Pho85p physical 1 1 1 Affinity Capture-RNA
ISU1 YPL135W Conserved protein of the mitochondrial matrix physical 1 1 1 Affinity Capture-RNA
YER079W YER079W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RGS2 YOR107W Negative regulator of glucose-induced cAMP signaling physical 1 1 1 Affinity Capture-RNA
YBR225W YBR225W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RPR2 YIR015W Subunit of nuclear RNase P physical 1 1 1 Affinity Capture-RNA
RPI1 YIL119C Transcription factor, allelic differences between S288C and Sigma1278b physical 1 1 1 Affinity Capture-RNA
LTO1 YNL260C Substrate-specific adaptor protein involved in apo-Rli1p maturation physical 1 1 1 Affinity Capture-RNA
MRPL38 YKL170W Mitochondrial ribosomal protein of the large subunit physical 1 1 1 Affinity Capture-RNA
NAM2 YLR382C Mitochondrial leucyl-tRNA synthetase physical 1 1 1 Affinity Capture-RNA
CSI1 YMR025W Subunit of the Cop9 signalosome physical 1 1 1 Affinity Capture-RNA
UPS2 YLR168C Mitochondrial intermembrane space protein physical 1 1 1 Affinity Capture-RNA
CNN1 YFR046C Kinetochore protein physical 1 1 1 Affinity Capture-RNA
MPO1 YGL010W Dioxygenase that catalyzes alpha-oxygenation of 2-hydroxy fatty acids physical 1 1 1 Affinity Capture-RNA
YLR297W YLR297W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
NDL1 YLR254C Homolog of nuclear distribution factor NudE physical 1 1 1 Affinity Capture-RNA
PRP38 YGR075C Unique component of the U4/U6.U5 tri-snRNP particle physical 1 1 1 Affinity Capture-RNA
MRX8 YDR336W Protein that associates with mitochondrial ribosome physical 1 1 1 Affinity Capture-RNA
RGI1 YER067W Protein involved in energy metabolism under respiratory conditions physical 1 1 1 Affinity Capture-RNA
MTL1 YGR023W Putative plasma membrane sensor physical 1 1 1 Affinity Capture-RNA
COX17 YLL009C Copper metallochaperone that transfers copper to Sco1p and Cox11p physical 1 1 1 Affinity Capture-RNA
FMP16 YDR070C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
VPS71 YML041C Nucleosome-binding component of the SWR1 complex physical 1 1 1 Affinity Capture-RNA
VPS71 YML041C Nucleosome-binding component of the SWR1 complex genetic 1 1 1 Synthetic Growth Defect
YLF2 YHL014C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
VHR2 YER064C Non-essential nuclear protein physical 1 1 1 Affinity Capture-RNA
YPL257W YPL257W Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PUT7 YLR283W Regulator of mitochondrial proline metabolism physical 1 1 1 Affinity Capture-RNA
HLR1 YDR528W Protein involved in regulation of cell wall composition and integrity physical 1 1 1 Affinity Capture-RNA
GLC3 YEL011W Glycogen branching enzyme, involved in glycogen accumulation physical 1 1 1 Affinity Capture-RNA
FIT2 YOR382W Mannoprotein that is incorporated into the cell wall physical 1 1 1 Affinity Capture-RNA
TYE7 YOR344C Serine-rich protein that contains a bHLH DNA binding motif physical 1 1 1 Affinity Capture-RNA
MIX14 YDR031W Mitochondrial intermembrane space protein of unknown function physical 1 1 1 Affinity Capture-RNA
PUT1 YLR142W Proline oxidase physical 1 1 1 Affinity Capture-RNA
ICY1 YMR195W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RRG9 YNL213C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
RSB1 YOR049C Sphingoid long-chain base (LCB) efflux transporter physical 1 1 1 Affinity Capture-RNA
EMC3 YKL207W Member of conserved ER transmembrane complex physical 1 1 1 Affinity Capture-RNA
MSS2 YDL107W Peripherally bound inner membrane protein of the mitochondrial matrix physical 1 1 1 Affinity Capture-RNA
LAF1 YMR102C Sterol-binding beta-propeller protein physical 1 1 1 Affinity Capture-RNA
HSP12 YFL014W Plasma membrane protein involved in maintaining membrane organization physical 1 1 1 Affinity Capture-RNA
YAP5 YIR018W Basic leucine zipper (bZIP) iron-sensing transcription factor physical 1 1 1 Affinity Capture-RNA
FYV10 YIL097W Subunit of GID complex physical 1 1 1 Affinity Capture-RNA
UIP4 YPL186C Protein that interacts with Ulp1p physical 1 1 1 Affinity Capture-RNA
YPS6 YIR039C Putative GPI-anchored aspartic protease physical 1 1 1 Affinity Capture-RNA
GIS3 YLR094C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
IRC15 YPL017C Microtubule associated protein physical 1 1 1 Affinity Capture-RNA
IFM1 YOL023W Mitochondrial translation initiation factor 2 physical 1 1 1 Affinity Capture-RNA
MHO1 YJR008W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ECL1 YGR146C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
GDH2 YDL215C NAD(+)-dependent glutamate dehydrogenase physical 1 1 1 Affinity Capture-RNA
XBP1 YIL101C Transcriptional repressor physical 1 1 1 Affinity Capture-RNA
YDL177C YDL177C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
PRP24 YMR268C Splicing factor that reanneals snRNPs during spliceosome recycling physical 1 1 1 Affinity Capture-RNA
PRP24 YMR268C Splicing factor that reanneals snRNPs during spliceosome recycling genetic 1 1 1 Negative Genetic
MRS2 YOR334W Mitochondrial inner membrane Mg(2+) channel physical 1 1 1 Affinity Capture-RNA
WSC4 YHL028W Endoplasmic reticulum (ER) membrane protein physical 1 1 1 Affinity Capture-RNA
TIS11 YLR136C mRNA-binding protein expressed during iron starvation physical 1 1 1 Affinity Capture-RNA
SDP1 YIL113W Stress-inducible dual-specificity MAP kinase phosphatase physical 1 1 1 Affinity Capture-RNA
DON1 YDR273W Meiosis-specific component of the spindle pole body physical 1 1 1 Affinity Capture-RNA
SUT1 YGL162W Zn(II)2Cys6 family transcription factor physical 1 1 1 Affinity Capture-RNA
YEL073C YEL073C Putative protein of unknown function physical 1 1 1 Affinity Capture-RNA
RGM1 YMR182C Putative zinc finger DNA binding transcription factor physical 1 1 1 Affinity Capture-RNA
MZM1 YDR493W Protein required for assembly of the cytochrome bc(1) complex physical 1 1 1 Affinity Capture-RNA
PCL5 YHR071W Cyclin physical 1 1 1 Affinity Capture-RNA
PHM6 YDR281C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
MCH5 YOR306C Plasma membrane riboflavin transporter physical 1 1 1 Affinity Capture-RNA
MRX19 YDL183C Protein that may form an active mitochondrial KHE system physical 1 1 1 Affinity Capture-RNA
YGR035C YGR035C Putative protein of unknown function, potential Cdc28p substrate physical 1 1 1 Affinity Capture-RNA
FIT3 YOR383C Mannoprotein that is incorporated into the cell wall physical 1 1 1 Affinity Capture-RNA
RRN11 YML043C Component of the core factor (CF) rDNA transcription factor complex physical 1 1 1 Affinity Capture-RNA
YIA6 YIL006W Mitochondrial NAD+ transporter physical 1 1 1 Affinity Capture-RNA
MIG2 YGL209W Zinc finger transcriptional repressor physical 1 1 1 Affinity Capture-RNA
ECI1 YLR284C Peroxisomal delta3,delta2-enoyl-CoA isomerase physical 1 1 1 Affinity Capture-RNA
MSO1 YNR049C Lipid-interacting protein in SNARE complex assembly machinery physical 1 1 1 Affinity Capture-RNA
COA6 YMR244C-A Protein involved in cytochrome c oxidase (Complex IV) assembly physical 1 1 1 Affinity Capture-RNA
VID24 YBR105C GID Complex regulatory subunit physical 1 1 1 Affinity Capture-RNA
CIS1 YLR346C Protein of unknown function found in mitochondria physical 1 1 1 Affinity Capture-RNA
RPA190 YOR341W RNA polymerase I largest subunit A190 genetic 1 1 1 Negative Genetic
DEF1 YKL054C RNAPII degradation factor physical 1 1 1 Affinity Capture-MS
SPT6 YGR116W Nucleosome remodeling protein physical 1 1 1 Affinity Capture-Western
STL1 YDR536W Glycerol proton symporter of the plasma membrane physical 1 1 1 Affinity Capture-RNA
SSA1 YAL005C ATPase involved in protein folding and NLS-directed nuclear transport physical 1 1 1 Affinity Capture-MS
NUT1 YGL151W Component of the RNA polymerase II mediator complex genetic 1 1 1 Phenotypic Enhancement
RPB2 YOR151C RNA polymerase II second largest subunit B150 genetic 1 1 1 Synthetic Lethality
DCP1 YOL149W Subunit of the Dcp1p-Dcp2p decapping enzyme complex genetic 1 1 1 Synthetic Lethality
NHP6B YBR089C-A High-mobility group (HMG) protein genetic 1 1 1 Synthetic Lethality
SPT5 YML010W Spt4p/5p (DSIF) transcription elongation factor complex subunit genetic 1 1 1 Dosage Rescue
RNR4 YGR180C Ribonucleotide-diphosphate reductase (RNR) small subunit genetic 1 1 1 Synthetic Lethality
RFX1 YLR176C Major transcriptional repressor of DNA-damage-regulated genes genetic 1 1 1 Synthetic Rescue
HSP82 YPL240C Hsp90 chaperone genetic 1 1 1 Synthetic Growth Defect
HSC82 YMR186W Cytoplasmic chaperone of the Hsp90 family genetic 1 1 1 Synthetic Growth Defect
DED1 YOR204W ATP-dependent DEAD-box RNA helicase with strand-annealing activity genetic 1 1 1 Synthetic Growth Defect
MDM12 YOL009C Mitochondrial outer membrane protein, ERMES complex subunit genetic 1 1 1 Negative Genetic
TVS1 YCR061W Protein of unknown function genetic 1 1 1 Positive Genetic
SEM1 YDR363W-A 19S proteasome regulatory particle lid subcomplex component genetic 1 1 1 Negative Genetic
MAL12 YGR292W Maltase (alpha-D-glucosidase) genetic 1 1 1 Negative Genetic
HIR1 YBL008W Subunit of the HIR complex genetic 1 1 1 Synthetic Growth Defect
GET1 YGL020C Subunit of the GET complex genetic 1 1 1 Synthetic Growth Defect
MMS4 YBR098W Subunit of structure-specific Mms4p-Mus81p endonuclease genetic 1 1 1 Synthetic Growth Defect
NHX1 YDR456W Na+/H+ and K+/H+ exchanger genetic 1 1 1 Synthetic Growth Defect
PIM1 YBL022C ATP-dependent Lon protease genetic 1 1 1 Synthetic Growth Defect
RVS161 YCR009C Amphiphysin-like lipid raft protein genetic 1 1 1 Synthetic Growth Defect
SRO9 YCL037C Cytoplasmic RNA-binding protein genetic 1 1 1 Synthetic Growth Defect
VMA1 YDL185W Subunit A of the V1 peripheral membrane domain of V-ATPase genetic 1 1 1 Synthetic Growth Defect
IRC19 YLL033W Protein of unknown function genetic 1 1 1 Synthetic Growth Defect
CTF8 YHR191C Subunit of a complex with Ctf18p genetic 1 1 1 Synthetic Growth Defect
STP22 YCL008C Component of the ESCRT-I complex genetic 1 1 1 Synthetic Growth Defect
ERG2 YMR202W C-8 sterol isomerase genetic 1 1 1 Synthetic Lethality
PAT1 YCR077C Deadenylation-dependent mRNA-decapping factor genetic 1 1 1 Synthetic Lethality
RPA34 YJL148W RNA polymerase I subunit A34.5 genetic 1 1 1 Synthetic Lethality
RVS167 YDR388W Calmodulin-binding actin-associated protein genetic 1 1 1 Synthetic Lethality
SAC1 YKL212W Phosphatidylinositol phosphate phosphatase genetic 1 1 1 Synthetic Lethality
VPS1 YKR001C Dynamin-like GTPase required for vacuolar sorting genetic 1 1 1 Synthetic Lethality
VMA21 YGR105W Integral membrane protein required for V-ATPase function genetic 1 1 1 Synthetic Growth Defect
VOA1 YGR106C ER protein that functions in assembly of the V0 sector of V-ATPase genetic 1 1 1 Synthetic Growth Defect
PRE9 YGR135W Alpha 3 subunit of the 20S proteasome genetic 1 1 1 Synthetic Rescue
RPN10 YHR200W Proteasome polyubiquitin receptor genetic 1 1 1 Synthetic Rescue
RRP6 YOR001W Nuclear exosome exonuclease component genetic 1 1 1 Synthetic Growth Defect
WSC2 YNL283C Sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway genetic 1 1 1 Dosage Rescue
POL30 YBR088C Proliferating cell nuclear antigen (PCNA) genetic 1 1 1 Phenotypic Suppression
SLG1 YOR008C Sensor-transducer of the stress-activated PKC1-MPK1 kinase pathway genetic 1 1 1 Dosage Rescue
PFY1 YOR122C Profilin genetic 1 1 1 Synthetic Growth Defect
RHO1 YPR165W GTP-binding protein of the rho subfamily of Ras-like proteins genetic 1 1 1 Dosage Rescue
TCP1 YDR212W Alpha subunit of chaperonin-containing T-complex genetic 1 1 1 Positive Genetic
MOB2 YFL034C-B Activator of Cbk1p kinase genetic 1 1 1 Positive Genetic
GFA1 YKL104C Glutamine-fructose-6-phosphate amidotransferase genetic 1 1 1 Positive Genetic
ERG13 YML126C 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase genetic 1 1 1 Positive Genetic
YTM1 YOR272W Ribosomal assembly factor and 66S pre-ribosomal particle constituent genetic 1 1 1 Positive Genetic
ERG10 YPL028W Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase) genetic 1 1 1 Positive Genetic
KRR1 YCL059C Nucleolar protein required for rRNA synthesis and ribosomal assembly genetic 1 1 1 Negative Genetic
LCB2 YDR062W Component of serine palmitoyltransferase genetic 1 1 1 Negative Genetic
SSS1 YDR086C Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p) genetic 1 1 1 Negative Genetic
SMT3 YDR510W Ubiquitin-like protein of the SUMO family genetic 1 1 1 Negative Genetic
GDI1 YER136W GDP dissociation inhibitor genetic 1 1 1 Negative Genetic
CDC4 YFL009W F-box protein required for both the G1/S and G2/M phase transitions genetic 1 1 1 Negative Genetic
SEC53 YFL045C Phosphomannomutase genetic 1 1 1 Negative Genetic
STT3 YGL022W Catalytic subunit of the oligosaccharyltransferase complex of the ER l genetic 1 1 1 Negative Genetic
SRM1 YGL097W Nucleotide exchange factor for Gsp1p genetic 1 1 1 Negative Genetic
TAF6 YGL112C Subunit (60 kDa) of TFIID and SAGA complexes genetic 1 1 1 Negative Genetic
GPI10 YGL142C Integral membrane protein involved in GPI anchor synthesis genetic 1 1 1 Negative Genetic
SMD1 YGR074W Core Sm protein Sm D1 genetic 1 1 1 Negative Genetic
SKI6 YGR195W Exosome non-catalytic core component genetic 1 1 1 Negative Genetic
NUP192 YJL039C Essential subunit of inner ring of nuclear pore complex (NPC) genetic 1 1 1 Negative Genetic
MTR4 YJL050W RNA duplex-sensing translocase genetic 1 1 1 Negative Genetic
EXO70 YJL085W Subunit of the exocyst complex genetic 1 1 1 Negative Genetic
CDC11 YJR076C Component of the septin ring that is required for cytokinesis genetic 1 1 1 Negative Genetic
RPT1 YKL145W ATPase of the 19S regulatory particle of the 26S proteasome genetic 1 1 1 Negative Genetic
EMG1 YLR186W Methyltransferase for rRNA genetic 1 1 1 Negative Genetic
KAP95 YLR347C Karyopherin beta genetic 1 1 1 Negative Genetic
SEC61 YLR378C Conserved ER protein translocation channel genetic 1 1 1 Negative Genetic
NSE5 YML023C Component of the SMC5-SMC6 complex genetic 1 1 1 Negative Genetic
TEM1 YML064C GTPase involved in initiation of Mitotic Exit Network (MEN) genetic 1 1 1 Negative Genetic
RNA1 YMR235C GTPase activating protein (GAP) for Gsp1p genetic 1 1 1 Negative Genetic
SEC63 YOR254C Essential subunit of Sec63 complex genetic 1 1 1 Negative Genetic
RPT4 YOR259C ATPase of the 19S regulatory particle of the 26S proteasome genetic 1 1 1 Negative Genetic
MEX67 YPL169C Poly(A)RNA binding protein involved in nuclear mRNA export genetic 1 1 1 Negative Genetic
DIM1 YPL266W Essential 18S rRNA dimethylase (dimethyladenosine transferase) genetic 1 1 1 Negative Genetic
PRE2 YPR103W Beta 5 subunit of the 20S proteasome genetic 1 1 1 Negative Genetic
RPN7 YPR108W Essential non-ATPase regulatory subunit of the 26S proteasome genetic 1 1 1 Negative Genetic
SEC23 YPR181C GTPase-activating protein, stimulates the GTPase activity of Sar1p genetic 1 1 1 Negative Genetic
DPM1 YPR183W Dolichol phosphate mannose (Dol-P-Man) synthase of ER membrane genetic 1 1 1 Negative Genetic
MON1 YGL124C Subunit of a heterodimeric guanine nucleotide exchange factor (GEF) genetic 1 1 1 Negative Genetic
VPS13 YLL040C Lipid transport protein involved in prospore membrane morphogenesis genetic 1 1 1 Negative Genetic
YPT7 YML001W Rab family GTPase genetic 1 1 1 Negative Genetic
VAM10 YOR068C Protein involved in vacuole morphogenesis genetic 1 1 1 Negative Genetic
PPH21 YDL134C Catalytic subunit of protein phosphatase 2A, PP2A genetic 1 1 1 Negative Genetic
RPL43A YPR043W Ribosomal 60S subunit protein L43A genetic 1 1 1 Synthetic Rescue
RPL43B YJR094W-A Ribosomal 60S subunit protein L43B genetic 1 1 1 Synthetic Rescue
SCD6 YPR129W Repressor of translation initiation genetic 1 1 1 Phenotypic Enhancement
REX2 YLR059C 3'-5' RNA exonuclease genetic 1 1 1 Dosage Rescue
BMS1 YPL217C GTPase required for ribosomal subunit synthesis and rRNA processing physical 1 1 1 Affinity Capture-RNA
ABD1 YBR236C Methyltransferase physical 1 1 1 Affinity Capture-RNA
ADE4 YMR300C Phosphoribosylpyrophosphate amidotransferase (PRPPAT) physical 1 1 1 Affinity Capture-RNA
APC1 YNL172W Largest subunit of the Anaphase-Promoting Complex/Cyclosome physical 1 1 1 Affinity Capture-RNA
APC2 YLR127C Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) physical 1 1 1 Affinity Capture-RNA
APL2 YKL135C Beta-adaptin subunit of the clathrin-associated protein (AP-1) complex physical 1 1 1 Affinity Capture-RNA
APL3 YBL037W Alpha-adaptin physical 1 1 1 Affinity Capture-RNA
APL5 YPL195W Delta adaptin-like subunit of the clathrin associated protein complex physical 1 1 1 Affinity Capture-RNA
APL6 YGR261C Beta3-like subunit of the yeast AP-3 complex physical 1 1 1 Affinity Capture-RNA
APL6 YGR261C Beta3-like subunit of the yeast AP-3 complex genetic 1 1 1 Negative Genetic
ASF1 YJL115W Nucleosome assembly factor physical 1 1 1 Affinity Capture-RNA
BDF1 YLR399C BET family transcriptional regulator physical 1 1 1 Affinity Capture-RNA
BEM1 YBR200W Protein containing SH3-domains physical 1 1 1 Affinity Capture-RNA
BET3 YKR068C Core component of transport protein particle (TRAPP) complexes I-III physical 1 1 1 Affinity Capture-RNA
BET2 YPR176C Beta subunit of Type II geranylgeranyltransferase physical 1 1 1 Affinity Capture-RNA
ASC1 YMR116C G-protein beta subunit and guanine dissociation inhibitor for Gpa2p physical 1 1 1 Proximity Label-MS
BEM2 YER155C Rho GTPase activating protein (RhoGAP) physical 1 1 1 Affinity Capture-RNA
BUD14 YAR014C Protein involved in bud-site selection physical 1 1 1 Affinity Capture-RNA
AIM21 YIR003W Subunit of a complex that associates with actin filaments physical 1 1 1 Affinity Capture-RNA
CCL1 YPR025C Cyclin partner of the cyclin-dependent kinase (CDK) Kin28p physical 1 1 1 Affinity Capture-RNA
BOI2 YER114C Protein involved in polar growth physical 1 1 1 Affinity Capture-RNA
ATP11 YNL315C Molecular chaperone physical 1 1 1 Affinity Capture-RNA
ATP11 YNL315C Molecular chaperone genetic 1 1 1 Synthetic Growth Defect
BNI1 YNL271C Formin physical 1 1 1 Affinity Capture-RNA
BNI1 YNL271C Formin genetic 1 1 1 Negative Genetic
BUD31 YCR063W Component of the SF3b subcomplex of the U2 snRNP physical 1 1 1 Affinity Capture-RNA
AVO1 YOL078W Component of the membrane-bound TORC2 complex physical 1 1 1 Affinity Capture-RNA
BDF2 YDL070W Protein involved in transcription initiation physical 1 1 1 Affinity Capture-RNA
AEP2 YMR282C Mitochondrial protein physical 1 1 1 Affinity Capture-RNA
ATP22 YDR350C Specific translational activator for the mitochondrial ATP6 mRNA physical 1 1 1 Affinity Capture-RNA
ACK1 YDL203C Protein that functions in the cell wall integrity pathway physical 1 1 1 Affinity Capture-RNA
ARB1 YER036C ATPase of the ATP-binding cassette (ABC) family physical 1 1 1 Affinity Capture-RNA
ADA2 YDR448W Transcription coactivator physical 1 1 1 Affinity Capture-RNA
ADA2 YDR448W Transcription coactivator genetic 1 1 1 Synthetic Growth Defect
BUD3 YCL014W Guanine nucleotide exchange factor (GEF) for Cdc42p physical 1 1 1 Affinity Capture-RNA
ATG26 YLR189C UDP-glucose:sterol glucosyltransferase physical 1 1 1 Affinity Capture-RNA
CCM1 YGR150C Mitochondrial 15S rRNA-binding protein physical 1 1 1 Affinity Capture-RNA
ATG3 YNR007C E2-like enzyme physical 1 1 1 Affinity Capture-RNA
ARP8 YOR141C Nuclear actin-related protein involved in chromatin remodeling physical 1 1 1 Affinity Capture-RNA
ARP8 YOR141C Nuclear actin-related protein involved in chromatin remodeling genetic 1 1 1 Synthetic Growth Defect
BUD21 YOR078W Component of small ribosomal subunit (SSU) processosome physical 1 1 1 Affinity Capture-RNA
AMS1 YGL156W Vacuolar alpha mannosidase physical 1 1 1 Affinity Capture-RNA
ABF2 YMR072W Mitochondrial DNA-binding protein physical 1 1 1 Affinity Capture-RNA
AVT4 YNL101W Vacuolar transporter physical 1 1 1 Affinity Capture-RNA
BRR1 YPR057W snRNP protein component of spliceosomal snRNPs genetic 1 1 1 Synthetic Growth Defect
BUR2 YLR226W Cyclin for the Sgv1p (Bur1p) protein kinase physical 1 1 1 Affinity Capture-RNA
BUR2 YLR226W Cyclin for the Sgv1p (Bur1p) protein kinase genetic 1 1 1 Synthetic Lethality
BCY1 YIL033C Regulatory subunit of the cyclic AMP-dependent protein kinase (PKA) physical 1 1 1 Affinity Capture-RNA
BET5 YML077W Core component of transport protein particle (TRAPP) complexes I-III physical 1 1 1 Affinity Capture-RNA
BCK1 YJL095W MAPKKK acting in the protein kinase C signaling pathway physical 1 1 1 Affinity Capture-RNA
BRO1 YPL084W Cytoplasmic class E vacuolar protein sorting (VPS) factor genetic 1 1 1 Synthetic Lethality
BDH2 YAL061W Putative medium-chain alcohol dehydrogenase with similarity to BDH1 physical 1 1 1 Affinity Capture-RNA
BRE2 YLR015W Subunit of COMPASS (Set1C) complex physical 1 1 1 Affinity Capture-RNA
BOI1 YBL085W Protein involved in polar growth, functionally redundant with Boi2p physical 1 1 1 Affinity Capture-RNA
CAB5 YDR196C Subunit of the CoA-Synthesizing Protein Complex (CoA-SPC) physical 1 1 1 Affinity Capture-RNA
AIM17 YHL021C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
AIM41 YOR215C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ATP4 YPL078C Subunit b of the stator stalk of mitochondrial F1F0 ATP synthase genetic 1 1 1 Synthetic Growth Defect
ACO1 YLR304C Aconitase physical 1 1 1 Affinity Capture-RNA
BBC1 YJL020C Protein possibly involved in assembly of actin patches physical 1 1 1 Affinity Capture-RNA
AKL1 YBR059C Ser/Thr protein kinase physical 1 1 1 Affinity Capture-RNA
ACH1 YBL015W Protein with CoA transferase activity physical 1 1 1 Affinity Capture-RNA
CAF20 YOR276W Phosphoprotein of the mRNA cap-binding complex physical 1 1 1 Affinity Capture-MS
ATG29 YPL166W Autophagy-specific protein physical 1 1 1 Affinity Capture-RNA
ATG31 YDR022C Autophagy-specific protein required for autophagosome formation physical 1 1 1 Affinity Capture-RNA
ATG17 YLR423C Scaffold protein responsible for phagophore assembly site organization physical 1 1 1 Affinity Capture-RNA
ASA1 YPR085C Subunit of the ASTRA complex, involved in chromatin remodeling physical 1 1 1 Affinity Capture-RNA
AAC3 YBR085W Mitochondrial inner membrane ADP/ATP translocator physical 1 1 1 Affinity Capture-RNA
APP1 YNL094W Phosphatidate phosphatase, converts phosphatidate to diacylglycerol physical 1 1 1 Affinity Capture-RNA
ARF1 YDL192W ADP-ribosylation factor physical 1 1 1 Affinity Capture-RNA
AIM2 YAL049C Cytoplasmic protein involved in mitochondrial function or organization physical 1 1 1 Affinity Capture-RNA
BUD13 YGL174W Subunit of the RES complex physical 1 1 1 Affinity Capture-RNA
APM3 YBR288C Mu3-like subunit of the clathrin associated protein complex (AP-3) genetic 1 1 1 Negative Genetic
AAT2 YLR027C Cytosolic aspartate aminotransferase involved in nitrogen metabolism physical 1 1 1 Affinity Capture-RNA
BOL2 YGL220W Cytosolic protein involved in repression of iron regulon transcription physical 1 1 1 Affinity Capture-RNA
BFA1 YJR053W Subunit of a two-component GTPase-activating protein, Bfa1p-Bub2p physical 1 1 1 Affinity Capture-RNA
CAF120 YNL278W Part of the CCR4-NOT transcriptional regulatory complex physical 1 1 1 Affinity Capture-MS
AAC1 YMR056C Mitochondrial inner membrane ADP/ATP translocator physical 1 1 1 Affinity Capture-RNA
ATG12 YBR217W Ubiquitin-like modifier involved in autophagy and the Cvt pathway physical 1 1 1 Affinity Capture-RNA
ATG11 YPR049C Adapter protein for pexophagy and the Cvt targeting pathway physical 1 1 1 Affinity Capture-RNA
AXL1 YPR122W Haploid specific endoprotease of a-factor mating pheromone physical 1 1 1 Affinity Capture-RNA
CBK1 YNL161W Serine/threonine protein kinase of the the RAM signaling network physical 1 1 1 Affinity Capture-RNA
CAT5 YOR125C Protein required for ubiquinone (Coenzyme Q) biosynthesis physical 1 1 1 Affinity Capture-RNA
APE1 YKL103C Vacuolar aminopeptidase yscI physical 1 1 1 Affinity Capture-RNA
ATG7 YHR171W Autophagy-related protein and dual specificity member of the E1 family physical 1 1 1 Affinity Capture-RNA
BUD32 YGR262C Protein kinase physical 1 1 1 Affinity Capture-RNA
ART10 YLR392C Protein of unknown function that contains 2 PY motifs physical 1 1 1 Affinity Capture-RNA
BUL1 YMR275C Alpha-arrestin, component of the Rsp5p E3-ubiquitin ligase complex physical 1 1 1 Affinity Capture-RNA
AFR1 YDR085C Protein required for pheromone-induced projection (shmoo) formation physical 1 1 1 Affinity Capture-RNA
CBP3 YPL215W Mitochondrial protein required for assembly of cytochrome bc1 complex physical 1 1 1 Affinity Capture-RNA
AIM46 YHR199C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ARE1 YCR048W Acyl-CoA:sterol acyltransferase physical 1 1 1 Affinity Capture-RNA
CAC2 YML102W Subunit of chromatin assembly factor I (CAF-1), with Rlf2p and Msi1p physical 1 1 1 Affinity Capture-RNA
ADE17 YMR120C Enzyme of 'de novo' purine biosynthesis physical 1 1 1 Affinity Capture-RNA
AIP5 YFR016C Protein that positively regulates actin assembly physical 1 1 1 Affinity Capture-RNA
ATE1 YGL017W Arginyl-tRNA-protein transferase physical 1 1 1 Affinity Capture-RNA
BUD7 YOR299W Member of the ChAPs family (Chs5p-Arf1p-binding proteins) physical 1 1 1 Affinity Capture-RNA
BEM4 YPL161C Protein involved in establishment of cell polarity and bud emergence physical 1 1 1 Affinity Capture-RNA
BCK2 YER167W Serine/threonine-rich protein involved in PKC1 signaling pathway physical 1 1 1 Affinity Capture-RNA
ATG20 YDL113C Sorting nexin family member physical 1 1 1 Affinity Capture-RNA
ATG4 YNL223W Conserved cysteine protease required for autophagy physical 1 1 1 Affinity Capture-RNA
ARF2 YDL137W ADP-ribosylation factor physical 1 1 1 Affinity Capture-RNA
BUD9 YGR041W Protein involved in bud-site selection physical 1 1 1 Affinity Capture-RNA
AHC1 YOR023C Subunit of the Ada histone acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
AIR1 YIL079C Zinc knuckle protein physical 1 1 1 Affinity Capture-RNA
ASR1 YPR093C Ubiquitin ligase that modifies and regulates RNA Pol II physical 1 1 1 Affinity Capture-RNA
AVT2 YEL064C Putative transporter physical 1 1 1 Affinity Capture-RNA
CBP2 YHL038C Required for splicing of the group I intron bI5 of the COB pre-mRNA physical 1 1 1 Affinity Capture-RNA
APE2 YKL157W Aminopeptidase yscII physical 1 1 1 Affinity Capture-RNA
ATG5 YPL149W Conserved protein involved in autophagy and the Cvt pathway physical 1 1 1 Affinity Capture-RNA
BIR1 YJR089W Subunit of chromosomal passenger complex (CPC) physical 1 1 1 Affinity Capture-RNA
ARO9 YHR137W Aromatic aminotransferase II physical 1 1 1 Affinity Capture-RNA
AFG3 YER017C Mitochondrial inner membrane m-AAA protease component physical 1 1 1 Affinity Capture-RNA
APM4 YOL062C Cargo-binding mu subunit of AP-2 physical 1 1 1 Affinity Capture-RNA
ASI3 YNL008C Subunit of the inner nuclear membrane Asi ubiquitin ligase complex physical 1 1 1 Affinity Capture-RNA
ATP5 YDR298C Subunit 5 of the stator stalk of mitochondrial F1F0 ATP synthase genetic 1 1 1 Synthetic Growth Defect
ATP7 YKL016C Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase genetic 1 1 1 Synthetic Growth Defect
ADH5 YBR145W Alcohol dehydrogenase isoenzyme V physical 1 1 1 Affinity Capture-RNA
BIT2 YBR270C Subunit of TORC2 membrane-associated complex physical 1 1 1 Affinity Capture-RNA
BUD27 YFL023W Unconventional prefoldin protein involved in translation initiation physical 1 1 1 Affinity Capture-RNA
ARP1 YHR129C Actin-related protein of the dynactin complex physical 1 1 1 Affinity Capture-RNA
ARP1 YHR129C Actin-related protein of the dynactin complex genetic 1 1 1 Synthetic Lethality
ADE2 YOR128C Phosphoribosylaminoimidazole carboxylase physical 1 1 1 Affinity Capture-RNA
ADE8 YDR408C Phosphoribosyl-glycinamide transformylase physical 1 1 1 Affinity Capture-RNA
ALR1 YOL130W Plasma membrane Mg(2+) transporter physical 1 1 1 Affinity Capture-RNA
ATG1 YGL180W Protein serine/threonine kinase physical 1 1 1 Affinity Capture-RNA
ATG13 YPR185W Regulatory subunit of the Atg1p signaling complex physical 1 1 1 Affinity Capture-RNA
ATG16 YMR159C Conserved protein involved in autophagy physical 1 1 1 Affinity Capture-RNA
ARH1 YDR376W Oxidoreductase of the mitochondrial inner membrane physical 1 1 1 Affinity Capture-RNA
BIM1 YER016W Microtubule plus end-tracking protein physical 1 1 1 Affinity Capture-RNA
BNI4 YNL233W Targeting subunit for Glc7p protein phosphatase physical 1 1 1 Affinity Capture-RNA
ARG81 YML099C Zinc finger transcription factor involved in arginine-responsive genes physical 1 1 1 Affinity Capture-RNA
AFT1 YGL071W Transcription factor involved in iron utilization and homeostasis physical 1 1 1 Affinity Capture-RNA
BSC5 YNR069C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ATG19 YOL082W Receptor protein for the cytoplasm-to-vacuole targeting (Cvt) pathway physical 1 1 1 Affinity Capture-RNA
BIT61 YJL058C Subunit of TORC2 membrane-associated complex physical 1 1 1 Affinity Capture-RNA
ASM4 YDL088C FG-nucleoporin component of central core of nuclear pore complex (NPC) physical 1 1 1 Affinity Capture-RNA
ALY2 YJL084C Alpha arrestin, Ub-ligase adaptor for Rsp5p physical 1 1 1 Affinity Capture-RNA
ACA1 YER045C ATF/CREB family basic leucine zipper (bZIP) transcription factor physical 1 1 1 Affinity Capture-RNA
ATG36 YJL185C Pex3p interacting protein, required for pexophagy physical 1 1 1 Affinity Capture-RNA
ATG34 YOL083W Receptor protein involved in selective autophagy during starvation physical 1 1 1 Affinity Capture-RNA
BAS1 YKR099W Myb-related transcription factor physical 1 1 1 Affinity Capture-RNA
CAK1 YFL029C Cyclin-dependent kinase-activating kinase physical 1 1 1 Affinity Capture-RNA
ACF4 YJR083C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
AIM18 YHR198C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
BMT2 YBR141C Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase physical 1 1 1 Affinity Capture-RNA
AIM7 YDR063W Protein that interacts with Arp2/3 complex physical 1 1 1 Affinity Capture-RNA
ART5 YGR068C Protein proposed to regulate endocytosis of plasma membrane proteins physical 1 1 1 Affinity Capture-RNA
AKR2 YOR034C Ankyrin repeat-containing protein physical 1 1 1 Affinity Capture-RNA
ASK10 YGR097W Regulator of the Fps1p glycerol channel physical 1 1 1 Affinity Capture-RNA
ASK1 YKL052C Essential subunit of the Dam1 complex (aka DASH complex) physical 1 1 1 Affinity Capture-RNA
AVO2 YMR068W Component of a complex containing the Tor2p kinase and other proteins physical 1 1 1 Affinity Capture-RNA
BLI1 YKL061W Subunit of the BLOC-1 complex involved in endosomal maturation physical 1 1 1 Affinity Capture-RNA
AIM4 YBR194W Protein proposed to be associated with the nuclear pore complex physical 1 1 1 Affinity Capture-RNA
BOS1 YLR078C v-SNARE (vesicle specific SNAP receptor) physical 1 1 1 Affinity Capture-RNA
APC5 YOR249C Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) genetic 1 1 1 Negative Genetic
APC11 YDL008W Catalytic core subunit, Anaphase-Promoting Complex/Cyclosome (APC/C) physical 1 1 1 Affinity Capture-RNA
APC4 YDR118W Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) physical 1 1 1 Affinity Capture-RNA
APC9 YLR102C Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) physical 1 1 1 Affinity Capture-RNA
BMT5 YIL096C Methyltransferase required for m3U2634 methylation of the 25S rRNA physical 1 1 1 Affinity Capture-RNA
BRF1 YGR246C TFIIIB B-related factor physical 1 1 1 Affinity Capture-RNA
BRE5 YNR051C Ubiquitin protease cofactor physical 1 1 1 Affinity Capture-MS
ARP6 YLR085C Actin-related protein that binds nucleosomes physical 1 1 1 Affinity Capture-RNA
ARP5 YNL059C Nuclear actin-related protein involved in chromatin remodeling physical 1 1 1 Affinity Capture-RNA
CBF1 YJR060W Basic helix-loop-helix (bHLH) protein physical 1 1 1 Affinity Capture-RNA
BUD5 YCR038C GTP/GDP exchange factor for Rsr1p (Bud1p) physical 1 1 1 Affinity Capture-RNA
BUR6 YER159C Subunit of a heterodimeric NC2 transcription regulator complex physical 1 1 1 Affinity Capture-RNA
ATG23 YLR431C Peripheral membrane protein required for autophagy and CVT physical 1 1 1 Affinity Capture-RNA
ATG8 YBL078C Ub-like protein physical 1 1 1 Affinity Capture-RNA
ATG8 YBL078C Ub-like protein genetic 1 1 1 Negative Genetic
BRN1 YBL097W Subunit of the condensin complex physical 1 1 1 Affinity Capture-RNA
BRN1 YBL097W Subunit of the condensin complex genetic 1 1 1 Negative Genetic
BUD4 YJR092W Anillin-like protein involved in bud-site selection physical 1 1 1 Affinity Capture-RNA
BNI5 YNL166C Linker protein responsible for recruitment of myosin to the bud neck physical 1 1 1 Affinity Capture-RNA
ATS1 YAL020C Protein required for modification of wobble nucleosides in tRNA physical 1 1 1 Affinity Capture-RNA
BIK1 YCL029C Microtubule-associated protein physical 1 1 1 Affinity Capture-RNA
BIK1 YCL029C Microtubule-associated protein genetic 1 1 1 Synthetic Growth Defect
CBF2 YGR140W Essential kinetochore protein physical 1 1 1 Affinity Capture-RNA
ATG2 YNL242W Peripheral membrane protein required for autophagic vesicle formation physical 1 1 1 Affinity Capture-RNA
BBP1 YPL255W Protein required for the spindle pole body (SPB) duplication physical 1 1 1 Affinity Capture-RNA
BUD8 YLR353W Protein involved in bud-site selection physical 1 1 1 Affinity Capture-RNA
BUD2 YKL092C GTPase activating factor for Rsr1p/Bud1p physical 1 1 1 Affinity Capture-RNA
ABF1 YKL112W DNA binding protein with possible chromatin-reorganizing activity physical 1 1 1 Affinity Capture-RNA
ABF1 YKL112W DNA binding protein with possible chromatin-reorganizing activity genetic 1 1 1 Negative Genetic
ARG80 YMR042W Transcription factor involved in regulating arginine-responsive genes physical 1 1 1 Affinity Capture-RNA
ARG82 YDR173C Inositol polyphosphate multikinase (IPMK) physical 1 1 1 Affinity Capture-RNA
BUD6 YLR319C Actin- and formin-interacting protein physical 1 1 1 Affinity Capture-RNA
AFI1 YOR129C Arf3p polarization-specific docking factor physical 1 1 1 Affinity Capture-RNA
CAD1 YDR423C AP-1-like basic leucine zipper (bZIP) transcriptional activator physical 1 1 1 Affinity Capture-RNA
AKR1 YDR264C Palmitoyl transferase involved in protein palmitoylation physical 1 1 1 Affinity Capture-RNA
BCH1 YMR237W Member of the ChAPs family (Chs5p-Arf1p-binding proteins) physical 1 1 1 Affinity Capture-RNA
ATC1 YDR184C Nuclear protein physical 1 1 1 Affinity Capture-RNA
ALY1 YKR021W Alpha arrestin, substrate of calcineurin physical 1 1 1 Affinity Capture-RNA
ARK1 YNL020C Ser/Thr protein kinase physical 1 1 1 Affinity Capture-RNA
BAT2 YJR148W Cytosolic branched-chain amino acid (BCAA) aminotransferase physical 1 1 1 Affinity Capture-RNA
AZF1 YOR113W Zinc-finger transcription factor physical 1 1 1 Affinity Capture-RNA
ATP10 YLR393W Assembly factor for the F0 sector of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
ATP10 YLR393W Assembly factor for the F0 sector of mitochondrial F1F0 ATP synthase genetic 1 1 1 Synthetic Growth Defect
ATP1 YBL099W Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase genetic 1 1 1 Synthetic Growth Defect
ADY4 YLR227C Structural component of the meiotic outer plaque physical 1 1 1 Affinity Capture-RNA
ACF2 YLR144C Intracellular beta-1,3-endoglucanase physical 1 1 1 Affinity Capture-RNA
CCH1 YGR217W Voltage-gated high-affinity calcium channel physical 1 1 1 Affinity Capture-RNA
APN2 YBL019W Class II abasic (AP) endonuclease involved in repair of DNA damage physical 1 1 1 Affinity Capture-RNA
ASH1 YKL185W Component of the Rpd3L histone deacetylase complex physical 1 1 1 Affinity Capture-RNA
AUR1 YKL004W Phosphatidylinositol:ceramide phosphoinositol transferase genetic 1 1 1 Negative Genetic
BSD2 YBR290W Heavy metal ion homeostasis protein physical 1 1 1 Affinity Capture-RNA
BCS1 YDR375C Protein translocase and chaperone required for Complex III assembly physical 1 1 1 Affinity Capture-RNA
BET4 YJL031C Alpha subunit of Type II geranylgeranyltransferase physical 1 1 1 Affinity Capture-RNA
ARL3 YPL051W ARF-like small GTPase of the RAS superfamily physical 1 1 1 Affinity Capture-RNA
ACM1 YPL267W Pseudosubstrate inhibitor of the APC/C physical 1 1 1 Affinity Capture-RNA
ATM1 YMR301C Mitochondrial inner membrane ATP-binding cassette (ABC) transporter physical 1 1 1 Affinity Capture-RNA
CBP1 YJL209W Mitochondrial protein, regulator of COB mRNA stability and translation physical 1 1 1 Affinity Capture-RNA
AQR1 YNL065W Plasma membrane transporter of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
ASG1 YIL130W Zinc cluster protein proposed to be a transcriptional regulator physical 1 1 1 Affinity Capture-RNA
ABZ1 YNR033W Para-aminobenzoate (PABA) synthase physical 1 1 1 Affinity Capture-RNA
BOP3 YNL042W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
AIM44 YPL158C Regulator of Cdc42p and Rho1p physical 1 1 1 Affinity Capture-RNA
ADI1 YMR009W Acireductone dioxygenease involved in methionine salvage pathway physical 1 1 1 Affinity Capture-RNA
ARO80 YDR421W Zinc finger transcriptional activator of the Zn2Cys6 family physical 1 1 1 Affinity Capture-RNA
AUS1 YOR011W Plasma membrane sterol transporter of the ATP-binding cassette family physical 1 1 1 Affinity Capture-RNA
BUG1 YDL099W Cis-golgi localized protein involved in ER to Golgi transport physical 1 1 1 Affinity Capture-RNA
APM2 YHL019C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ATX1 YNL259C Cytosolic copper metallochaperone physical 1 1 1 Affinity Capture-RNA
ADE1 YAR015W N-succinyl-5-aminoimidazole-4-carboxamide ribotide synthetase physical 1 1 1 Affinity Capture-RNA
ASF2 YDL197C Anti-silencing protein physical 1 1 1 Affinity Capture-RNA
CBS2 YDR197W Mitochondrial translational activator of the COB mRNA physical 1 1 1 Affinity Capture-RNA
ATF1 YOR377W Alcohol acetyltransferase physical 1 1 1 Affinity Capture-RNA
BTS1 YPL069C Geranylgeranyl diphosphate synthase (GGPPS) physical 1 1 1 Affinity Capture-RNA
BUD22 YMR014W Protein required for rRNA maturation and ribosomal subunit biogenesis physical 1 1 1 Affinity Capture-RNA
BNS1 YGR230W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
BCH2 YKR027W Member of the ChAPs (Chs5p-Arf1p-binding proteins) family physical 1 1 1 Affinity Capture-RNA
CAN1 YEL063C Plasma membrane arginine permease physical 1 1 1 Affinity Capture-RNA
AGP2 YBR132C Plasma membrane regulator of polyamine and carnitine transport physical 1 1 1 Affinity Capture-RNA
AVT6 YER119C Vacuolar aspartate and glutamate exporter physical 1 1 1 Affinity Capture-RNA
BAP3 YDR046C Amino acid permease physical 1 1 1 Affinity Capture-RNA
ANT1 YPR128C Peroxisomal adenine nucleotide transporter physical 1 1 1 Affinity Capture-RNA
BNA7 YDR428C Formylkynurenine formamidase physical 1 1 1 Affinity Capture-RNA
ATP14 YLR295C Subunit h of the F0 sector of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
ATP15 YPL271W Epsilon subunit of the F1 sector of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
BOL3 YAL046C Protein involved in Fe-S cluster transfer to mitochondrial clients physical 1 1 1 Affinity Capture-RNA
BDH1 YAL060W NAD-dependent (R,R)-butanediol dehydrogenase physical 1 1 1 Affinity Capture-RNA
ASE1 YOR058C Mitotic spindle midzone-localized microtubule bundling protein physical 1 1 1 Affinity Capture-RNA
AYT1 YLL063C Acetyltransferase physical 1 1 1 Affinity Capture-RNA
BUD23 YCR047C Ribosome biogenesis factor physical 1 1 1 Affinity Capture-RNA
BUL2 YML111W Alpha-arrestin, component of the Rsp5p E3-ubiquitin ligase complex physical 1 1 1 Affinity Capture-RNA
AIM22 YJL046W Lipoate-protein ligase physical 1 1 1 Affinity Capture-RNA
BLS1 YLR408C Subunit of the BLOC-1 complex involved in endosomal maturation physical 1 1 1 Affinity Capture-RNA
AHK1 YDL073W Scaffold protein in the HKR1 sub-branch of the Hog1p-signaling pathway physical 1 1 1 Affinity Capture-RNA
ACP1 YKL192C Mitochondrial matrix acyl carrier protein physical 1 1 1 Affinity Capture-RNA
ARG56 YER069W Acetylglutamate kinase and N-acetyl-gamma-glutamyl-phosphate reductase physical 1 1 1 Affinity Capture-RNA
BRL1 YHR036W Essential nuclear envelope/ER integral membrane protein physical 1 1 1 Affinity Capture-RNA
ATG38 YLR211C Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I physical 1 1 1 Affinity Capture-RNA
BNA1 YJR025C 3-hydroxyanthranilic acid dioxygenase physical 1 1 1 Affinity Capture-RNA
ATG32 YIL146C Mitochondrial outer membrane protein required to initiate mitophagy physical 1 1 1 Affinity Capture-RNA
ARA2 YMR041C NAD-dependent arabinose dehydrogenase physical 1 1 1 Affinity Capture-RNA
ATP12 YJL180C Assembly factor for F1 sector of mitochondrial F1F0 ATP synthase physical 1 1 1 Affinity Capture-RNA
ANB1 YJR047C Translation elongation factor eIF-5A physical 1 1 1 Affinity Capture-RNA
BYE1 YKL005C Negative regulator of transcription elongation physical 1 1 1 Affinity Capture-RNA
AQY3 YFL054C Putative channel-like protein physical 1 1 1 Affinity Capture-RNA
CBS1 YDL069C Mitochondrial translational activator of the COB mRNA physical 1 1 1 Affinity Capture-RNA
APS1 YLR170C Small subunit of the clathrin-associated adaptor complex AP-1 physical 1 1 1 Affinity Capture-RNA
BIL1 YOR304C-A Protein that binds Bud6p and has a role in actin cable assembly physical 1 1 1 Affinity Capture-RNA
ANY1 YMR010W Protein involved in phospholipid flippase function physical 1 1 1 Affinity Capture-RNA
ALD4 YOR374W Mitochondrial aldehyde dehydrogenase physical 1 1 1 Affinity Capture-RNA
AIM23 YJL131C Mitochondrial translation initiation factor 3 (IF3, mIF3) physical 1 1 1 Affinity Capture-RNA
AHC2 YCR082W Component of the ADA histone acetyltransferase complex physical 1 1 1 Affinity Capture-RNA
ABZ2 YMR289W Aminodeoxychorismate lyase (4-amino-4-deoxychorismate lyase) physical 1 1 1 Affinity Capture-RNA
ALT1 YLR089C Alanine transaminase (glutamic pyruvic transaminase) physical 1 1 1 Affinity Capture-RNA
ATP25 YMR098C Protein that associates with mitochondrial ribosome physical 1 1 1 Affinity Capture-RNA
BST1 YFL025C GPI inositol deacylase of the endoplasmic reticulum (ER) physical 1 1 1 Affinity Capture-RNA
ATG21 YPL100W Phosphoinositide binding protein physical 1 1 1 Affinity Capture-RNA
AIM29 YKR074W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
ADD37 YMR184W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
AIM11 YER093C-A Protein of unknown function physical 1 1 1 Affinity Capture-RNA
AIM39 YOL053W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
APS2 YJR058C Small subunit of the clathrin-associated adaptor complex AP-2 physical 1 1 1 Affinity Capture-RNA
AGE1 YDR524C ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector physical 1 1 1 Affinity Capture-RNA
ALG6 YOR002W ER-luminal alpha 1,3 glucosyltransferase physical 1 1 1 Affinity Capture-RNA
ATR1 YML116W Multidrug efflux pump of the major facilitator superfamily physical 1 1 1 Affinity Capture-RNA
ASI2 YNL159C Subunit of the inner nuclear membrane Asi ubiquitin ligase complex physical 1 1 1 Affinity Capture-RNA
AAD14 YNL331C Putative aryl-alcohol dehydrogenase physical 1 1 1 Affinity Capture-RNA
AST2 YER101C Lipid raft associated protein physical 1 1 1 Affinity Capture-RNA
AIM34 YMR003W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
BAP2 YBR068C High-affinity leucine permease physical 1 1 1 Affinity Capture-RNA
ALG14 YBR070C Component of UDP-GlcNAc transferase physical 1 1 1 Affinity Capture-RNA
ALG14 YBR070C Component of UDP-GlcNAc transferase genetic 1 1 1 Negative Genetic
BSC1 YDL037C Protein of unconfirmed function physical 1 1 1 Affinity Capture-RNA
AMD2 YDR242W Putative amidase physical 1 1 1 Affinity Capture-RNA
ALG2 YGL065C Mannosyltransferase in the N-linked glycosylation pathway physical 1 1 1 Affinity Capture-RNA
BRR6 YGL247W Essential nuclear envelope integral membrane protein physical 1 1 1 Affinity Capture-RNA
AVL9 YLR114C Conserved protein involved in exocytic transport from the Golgi physical 1 1 1 Affinity Capture-RNA
ATG41 YPL250C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
BRE4 YDL231C Zinc finger protein containing five transmembrane domains physical 1 1 1 Affinity Capture-RNA
AFT2 YPL202C Iron-regulated transcriptional activator physical 1 1 1 Affinity Capture-RNA
BOR1 YNL275W Boron efflux transporter of the plasma membrane physical 1 1 1 Affinity Capture-RNA
AIM14 YGL160W NADPH oxidase localized to the perinuclear ER physical 1 1 1 Affinity Capture-RNA
AVT5 YBL089W Putative transporter physical 1 1 1 Affinity Capture-RNA
APT2 YDR441C Potential adenine phosphoribosyltransferase physical 1 1 1 Affinity Capture-RNA
ATH1 YPR026W Acid trehalase required for utilization of extracellular trehalose physical 1 1 1 Affinity Capture-RNA
APA2 YDR530C Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase II physical 1 1 1 Affinity Capture-RNA
ARN1 YHL040C ARN family transporter for siderophore-iron chelates physical 1 1 1 Affinity Capture-RNA
CCC2 YDR270W Cu(+2)-transporting P-type ATPase physical 1 1 1 Affinity Capture-RNA
CBP4 YGR174C Mitochondrial protein required for assembly of cytochrome bc1 complex physical 1 1 1 Affinity Capture-RNA
AIM32 YML050W 2Fe-2S mitochondrial protein involved in redox quality control physical 1 1 1 Affinity Capture-RNA
AGC1 YPR021C Mitochondrial amino acid transporter physical 1 1 1 Affinity Capture-RNA
AFG1 YEL052W Protein that may act as a chaperone for cytochrome c oxidase subunits physical 1 1 1 Affinity Capture-RNA
AIM20 YIL158W Protein of unknown function physical 1 1 1 Affinity Capture-RNA
BER1 YLR412W Protein involved in microtubule-related processes physical 1 1 1 Affinity Capture-RNA
AIM19 YIL087C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
AVT7 YIL088C Vacuolar amino acid transporter physical 1 1 1 Affinity Capture-RNA
AGP1 YCL025C Broad-specificity, low-affinity amino acid permease physical 1 1 1 Affinity Capture-RNA
ATG22 YCL038C Vacuolar integral membrane protein required for efflux of amino acids physical 1 1 1 Affinity Capture-RNA
ALG11 YNL048W Alpha-1,2-mannosyltransferase physical 1 1 1 Affinity Capture-RNA
ATX2 YOR079C Golgi membrane protein involved in manganese homeostasis physical 1 1 1 Affinity Capture-RNA
BCD1 YHR040W Essential protein required for the accumulation of box C/D snoRNA physical 1 1 1 Affinity Capture-RNA
AIM10 YER087W Protein with similarity to tRNA synthetases physical 1 1 1 Affinity Capture-RNA
AIM33 YML087C Protein of unknown function, highly conserved across species physical 1 1 1 Affinity Capture-RNA
CBT1 YKL208W Protein involved in 5' RNA end processing physical 1 1 1 Affinity Capture-RNA
AIM24 YJR080C Protein with a role in determining mitochondrial architecture physical 1 1 1 Affinity Capture-RNA
AIM36 YMR157C Protein of unknown function physical 1 1 1 Affinity Capture-RNA
AIF1 YNR074C Mitochondrial cell death effector physical 1 1 1 Affinity Capture-RNA
ATP23 YNR020C Putative metalloprotease of the mitochondrial inner membrane physical 1 1 1 Affinity Capture-RNA
ATP23 YNR020C Putative metalloprotease of the mitochondrial inner membrane genetic 1 1 1 Synthetic Growth Defect
APQ12 YIL040W Nuclear envelope/ER integral membrane protein physical 1 1 1 Affinity Capture-RNA
CAX4 YGR036C Dolichyl pyrophosphate (Dol-P-P) phosphatase physical 1 1 1 Affinity Capture-RNA